Rroxscaffold_7G00166880

Auxilin-like protein 1

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
8232814 .. 8239715
6902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00166880.1

Sequence Viewer

Length: 5214 bp
ATGGAGTACCAGACTTCATCCGTGGCTCTTTCGCAGAAGCTCTCCTCCGGCCACTCCATATACGACGGCGTTTTCACCTCGGCTCCCTCTAAGTTCACCGTATCGTCTTTCTCTTCCCGGCTCGAAGACTACTGCGAGATTTTCGGCGGCTCAGGCGCCGCCTCCTCGATTCCGGTTCTGGAAGTTCCGGAGCCGAATGAGCGAAAAGCTTCGGTGGATGTTCGGAGCTCGAAGCTTGATTACTCCAATGTCTTCGGTGGCTTTGGCGATTCCGAATTCGCAGTGCCGTATGAGGAGCTCTTTGCTGAGCCGAAGAAAAGGACTAAATTGCACAAAGAAAGCAGGAGACAGCCTGAAAGAGTGTCACCTCCAAAAGAGGCAAAACGATCATGTTCAGAGGAAAATATTGATTTACCAAATGAAGCAGCTTATGAGTCATTTGATGGTGTTAAGAAGTTCAGCATGTCATATAATCAAAGCAACAATAGAAGCAAGAGTTTTGCAGGTGTGCATTCTGTTCCAGCATATACCTGCTTGGTTGATGAGACCGCTCCCTTGCGCGCCACCGAAGGAGATAAATCAGTGTCAATGTCAATGTCGTCGGTAGCGAAAGAGAGAACAATGGAGGGCAATCGGTCCGTGAAAGCCATGAGAGACCAACCAGCTGGTGATACCGGCAAACAGGCTTCTGGGGGAGGAGGTGTCAAGGCTCAGAACAATTCTAATTGGAAAAATTCAATTGATGAGTTATTTAACTCGAATGAAACGGGGCAAGAAACTCCTCCTTCAAGCAGTCCTCCATTTTCAAGTCAGGTTTCTGAAGGTGATAAACCAGTGTCGTTAGTAGCAAATGGTGCTAGCAGTGTTAATGGTGTTGAGAGAAAAATGGAGGGCAACCATCACATGAAAGCCGCAGGGGACCACCAAGCTACTGATGCAAGTAAACAGACCTCTGGAGGAGTTGCCAAGGTTCAGAACAATTCCAAGTGGAGAAGTTCCGGCTCAATCGATAAGTTATTTTATTCAGGGGAAATTGCGCAAGAAACTCGTCCTTCAAACATGCCTCCAGTTTCAAGCATGCGTTCTGATGGGAAGGGTGAATTTGAGAAACCAATGGCTTCTATGTTTGGGGTTTTTAATCGTGATACTTTTGAAGGTGCTGACAGTGTTTCCTCACCGCCATACTTCGATGAGGAAGTAGACACAAACTCTGTTGCAGCTGCATCTGTTGCTGCTTTGACAAAGGCAATAGAGGAGGCTCAAGCAAGTATACAAATGGCAAAGGAGTTGATGGATAGAAAGAAGTTTGGTCCTCAAAATCGAGTCAAATTGAGCTTTGACAACAGTATGAAACCTAAGTCTAGAAAGGGCGGTAGATTTGCAGACAAAGCTACCATATCCAAAGAGACAAAGACTCAGGAACTGTATGACACAGTGGATGTTCCTGTCCATGTTTCCGCTGAGCCAGAACAAGTAACTCCAGTATTTGAAAATGCATCTATAATTAGTGATGTGATGGTAACTGGAGAGGAAGTACGTGAAAAGGAAATTGCTGATAATGCAAGCATATTTACAAAGAAGAAGACCCAGGAATTACAAGAAGAGGTTCATGTCTCTGCTGGGCCAGAACAAGTATCTGTAGCACTTGAAGACACAGATAAACTTAGTGGTGTGATGGAAACTCGAGAGAAAGTGCATGGACAGGAATTTAAACCAACTCCAACAGATCACAGGCATGAAGAAGCTGATGACTCAGAAGCAGCAGAACAGTTTTATGAATTTGCTGACACAATTGAACAAGATGTTTCAGAAGCAACAGAACAGTTCTATGAAGTTGCTGACAGCAGTGAACCTGATGTATCAGAAGCGACAGAAGAATTTTATGAATTTGCTGACTCAAACGGACGGCATGATACAGTATTAGAGAATCAAGAAGCCAACAATACAAGGAAAATGTTCCGATCTGTAGATAATGATGAACAAGAGAAGAAAACGGACATGGAAGCCTTCGAAAATCCAGAGCAAGTTGGCATGACATTAAAAGCAGCTACAGAAGAAGAACAAAGAGAAGTAGAGAATATATTCAATATTGTTGGAGGGGTTTCTGAGTTTGATGAAAATGAGAATGGATTAGCATCATCTCAAGAGGGTTCTAATCAGGAAGATAATGAGAAGCCACGGGAAGCTCCCAGAGAGCATGAAGAAACTGCAAAGCTTACAACAACACATGTAAAGGAAACATGTGAAGAGAAACAAAATGGAGATGACAAGAGGTTTGAAACTCAGAAATTGCAGGAGACTGAACATGTGGATATAAAATTGGTGGCTCAGGAGCGGGTTGAAAATGAGAAGATTGACAGGGAGGCTTGCATGCTGGAAGAAAATGAGACAGAACAAACATATGCCCAGAGTGAAGAAGACACTGACAGGAGTCTCAATGAAGATAACAAGGAAGAAATCATCGAGACAGTGAATGACTTATATGATAAGGAAGATTTTGAAAAGAGACTTAAAGATGACAGCAAGTCTGAAGGAAATGAGAAGCTGCAAGACACGAGACCGAATGAGAAGATACTTGAAGAGGCTACTTGTCACAAGGAGTGTGAGAATCGCCAAGAAGAGAGTTTTGAATTTGTCGGAGTTGGGAGAATGCAAATACTGATGGATGAGAGCACAGAAAATGAGAAAGTGCAGGTGACTGAAGAGGATCAAAAGAGCCTGGAATGCAATTTTGAGGCAGCAGATAACCTGTATGAGCAGGGTGTAAGTGGGGACCTAAACAGCAAACAGGGATCTGCTAGACATGTAGATTGCAACCAAGTACCTATGGATGAGAGCACAGAAAATGAGAAACTGCAGGTGACTCGAGAGGATCAAAAGAACCTGGAGTGCAATTCTGAGGCAGCAGATAACCTGTATGAGCAGGGTGTAAGTAGGGACCTAAACAGCAAACAGGGATCTGCTAGACATGTAGATTGCGATCAAGATGTAGAAGAAACTCAGAAATTACCAACAAACAAAGAGGATGGAGGGGTGAGAGAAGGTGCTGAAACTTCAATTCAGCTCGAAGAGAATGAGCACCAGACAGAACTGGTTGAAGAGGAGAATGGCATGGCAGAGAAAGAGATATGTGAAACAGATGGCTTGACTAAACTTCCTGAGAGGCCGAAGAAAATGGAAGATGCAACAGAGATCCATTCTTTTGACAAAAATGGAATACGCGCAAGTGAAAGTGACATGAGCTTTGTGCAAAAACAAGATGACAAGCTTGCTGTAGAGTCCAATGTAGACTACAGTGTAGGAAGGCAGGTTGAAGAATGTGAAGAATTGGGAGATATCAATAGTGATATGATGGGAGCTGAAGTTGCTGTGAATCAGGAAAGGAACAAGAATGGTCCCAAATCTAGGAAAAGATGGTTTGGTACTAATGAAGTCTCGGAAACTTTCATTAAACTTGAGGAGGATGGGAATCAATCAGAATTAGTTGAAGAGGAGGATGTTATGGAAGAGAAAGTGATATGTGAAATAGAGGGCTTGGCTTCAGGTGTCAAACTTGCTGAGATACTGAAGCAAATGGAAGATGCAATAGAGATCCATTCTTCGGACAAAAATGGGACAAGTGTATATGGGCAAAAGCAAGATGCCCAGCTTGCCAGAGAGCCTGAAGTAGCCTGCAATGTAGGAATGCATGTTGAAGAATTGGGAGATATTAATAAGAACATGATGGGACCTGAAGTTGCTGCTGTGAATCAGGAGGAGAATGTGAATATTACCAAGTCTTCTCACAGGAAAAGATGGTTTGACAATGGGAAGGATACAAAAGTAGCTCAGGCTCCTCATATATTTGGTAGAAAAGCAGGAAGTGTGCTACTGGATAATGAGACGGACACAAGCCTGTATACAAAGATAGATAAGGAGAATCATCATAAAGTCATGACAAGTCAAAGTACAGAAGTAAATGAGGACAGCCAACAAGCAACCTTGAGGCTGAAGGAGAGTGACACCATTCATAGTTCACTGAAAGAATCGGAACAAGAAAACAATGAAAATCCACAAACAACCTTGTCTGCAGAAGAGAGTGAAACTGACCATAATTCGCAGGAAGTGGAACAAGAGGGTCAAGCAACCCTGACAGCAAAAGAGATTGAAACGAACTACACTTCTCAAAAAGAAGTGGAACGAGAAAAGGAGAATCAACAAGAATCTCAGACTGCAAACGAGTTTGAAATTAGTGCTAGTTCACAAAAGGTAGTGGAGCTCGAGAAAGAGCACCTGATTCAGAAAGCAGAAAAACGAAGAGAAAGGGAAAGACAAAAAGAGAAAAGAGCTGTTGAACGAGCAATTCGTGAAGCTCGTGAAAGGTCATTTGCTGATGTCAAGGAAAGAGTGGCTGAAACTCGTCAAAAGGTAATGGCTGAGGCCCAAGGAAGGTTAGGGAAGACTTCCGTGCAGGCTAAAGATACTTCATTAGCTGAGCAGGCTTCAAAGGAAGCCAAACAAAAATGGGAACGTGCTGCTGTTGAAAGAGCAACTGCAGAGGCTCGGGATCGTTTCTTAGAAAAAGCATTATCTGCAAAAAAGTCGGTTCCAGAGAAATATTCTGGTGCTTCTACGGAAGGAAAGCAGGCTAAAAGATCTGCTTCTGAGAAATTTTCTGGCGCTTCTAGAGATAATGGGGCGAACCGGTCCTTTGATCTAGAGTCCAAAGGTTCACTCTCTTCAAGCGCATCAAGATCCCCAAATTCTTCACATCAGTCTGGTGAGCGGTCTGCTGGAACTAATGGTGAATCAGCTCAAAGGAGTAAGGCTACGTTGGAGCGGAATCAACGGACAGCAGAACGTGCGGCAAAAGCTCTCGCGGAGAAGAATAATCGGGATCTTCTTGTACAACAAGAGCAAGCTGAGAGAAATAGATTAGCAGAAGTGCTTGATGCCGAGGTCAAAAGGTGGTCAAGTGGGAAGGAGAGAAATTTGCGTGCATTGCTCTCAACACTACAATATATCCTTGGACCTGATAGTGGTTGGCAGCCGGTTCCTCTTACCGATATTGTTACTGCTGTTGCTGTAAAGAAAGCTTATCGTAAAGCTGCACTCTTTGTTCATCCTGACAAGTTACAGCAACGGGGTGCAAGCATTCAGCAGAAGTACACTTGTGAGAAGGTGTTTGATCTTCTAAAGGATGCTTGGAATAGATTCAGCACGGAAGAGCGATAA

Protein Analysis

1737

Amino Acids

194.1

Weight (kDa)

4.79

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 494, 2683, 2848
Acc16I TGCGCA 1 cut(s) 1038
Acc36I ACCTGC 5 cut(s) 494, 539, 2683, 2848, 3298
AccB1I GGYRCC 1 cut(s) 155
AccBSI CCGCTC 4 cut(s) 551, 2335, 4765, 4819
AccI GTMKAC 4 cut(s) 1200, 1270, 3288, 3899
AccII CGCG 3 cut(s) 561, 3222, 4859
AccIII TCCGGA 1 cut(s) 187
AclWI GGATC 9 cut(s) 2715, 2800, 2880, 2965, 3187, 3586, 4554, 4728, 4884
AcoI YGGCCR 1 cut(s) 49
AcuI CTGAAG 9 cut(s) 840, 2550, 2721, 3381, 3525, 3587, 3684, 3753, 4010
AcyI GRCGYC 1 cut(s) 156
AfaI GTAC 7 cut(s) 8, 1536, 2823, 3424, 3949, 4887, 5147
AfiI CCNNNNNNNGG 4 cut(s) 3405, 3601, 4428, 5018
AflIII ACRYGT 5 cut(s) 2227, 2240, 2305, 2803, 2968
AgeI ACCGGT 1 cut(s) 4683
AhdI GACNNNNNGTC 1 cut(s) 2524
AjnI CCWGG 3 cut(s) 1587, 2718, 2883
Alw21I GWGCWC 7 cut(s) 230, 300, 2675, 2840, 3081, 4260, 4272
AlwI GGATC 9 cut(s) 2715, 2800, 2880, 2965, 3187, 3586, 4554, 4728, 4884
AlwNI CAGNNNCTG 1 cut(s) 1423
Ama87I CYCGRG 4 cut(s) 1683, 2865, 4259, 4542
Aor13HI TCCGGA 1 cut(s) 187
AoxI GGCC 4 cut(s) 49, 1622, 3164, 4419
ArsI GACNNNNNNTTYG 4 cut(s) 2258, 2290, 3227, 3259
AseI ATTAAT 1 cut(s) 3711
AsiGI ACCGGT 1 cut(s) 4683
Asp700I GAANNNNTTC 5 cut(s) 208, 1605, 1955, 2081, 5192
AspLEI GCGC 7 cut(s) 158, 561, 563, 1039, 3224, 4661, 4727
AsuC2I CCSGG 1 cut(s) 118
AsuII TTCGAA 1 cut(s) 2010
AsuNHI GCTAGC 1 cut(s) 857
AvaI CYCGRG 4 cut(s) 1683, 2865, 4259, 4542
AvaII GGWCC 9 cut(s) 636, 919, 1310, 2773, 2938, 3395, 3728, 4686, 5009
BaeI ACNNNNGTAYC 2 cut(s) 3807, 3840
BanI GGYRCC 1 cut(s) 155
BanII GRGCYC 3 cut(s) 230, 300, 4260
BarI GAAGNNNNNNTAC 2 cut(s) 224, 256
BauI CACGAG 2 cut(s) 2554, 4353
BbsI GAAGAC 7 cut(s) 132, 244, 1589, 1656, 2424, 3771, 4445
Bbv12I GWGCWC 7 cut(s) 230, 300, 2675, 2840, 3081, 4260, 4272
BbvCI CCTCAGC 1 cut(s) 4416
BceAI ACGGC 3 cut(s) 82, 271, 1922
BcgI CGANNNNNNTGC 6 cut(s) 1028, 1062, 2846, 2880, 4563, 4597
BciT130I CCWGG 3 cut(s) 1589, 2720, 2885
BciVI GTATCC 1 cut(s) 3808
BcnI CCSGG 1 cut(s) 118
BfaI CTAG 8 cut(s) 858, 1362, 2799, 2964, 3405, 4236, 4665, 4697
BfmI CTRYAG 8 cut(s) 1638, 1965, 2049, 2855, 3273, 3292, 4068, 4533
BfoI RGCGCY 2 cut(s) 159, 4662
BfuAI ACCTGC 5 cut(s) 494, 539, 2683, 2848, 3298
BfuI GTATCC 1 cut(s) 3808
BglII AGATCT 1 cut(s) 4634
BlpI GCTNAGC 3 cut(s) 306, 1461, 4473
Bme1390I CCNGG 4 cut(s) 118, 1589, 2720, 2885
Bme18I GGWCC 9 cut(s) 636, 919, 1310, 2773, 2938, 3395, 3728, 4686, 5009
BmeRI GACNNNNNGTC 1 cut(s) 2524
BmeT110I CYCGRG 4 cut(s) 1683, 2865, 4259, 4542
BmrFI CCNGG 4 cut(s) 118, 1589, 2720, 2885
BmtI GCTAGC 1 cut(s) 861
BoxI GACNNNNGTC 1 cut(s) 2430
BpiI GAAGAC 7 cut(s) 132, 244, 1589, 1656, 2424, 3771, 4445
BpmI CTGGAG 5 cut(s) 975, 1050, 1464, 1545, 2906
Bpu10I CCTNAGC 4 cut(s) 151, 2328, 3828, 4416
Bpu1102I GCTNAGC 3 cut(s) 306, 1461, 4473
Bpu14I TTCGAA 1 cut(s) 2010
BpuEI CTTGAG 4 cut(s) 1245, 2127, 3476, 4003
BpuMI CCSGG 1 cut(s) 118
Bsa29I ATCGAT 1 cut(s) 1008
BsaAI YACGTR 1 cut(s) 1538
BsaBI GATNNNNATC 3 cut(s) 2134, 2979, 3468
BsaHI GRCGYC 1 cut(s) 156
BsaI GGTCTC 3 cut(s) 539, 648, 2551
BsaJI CCNNGG 8 cut(s) 21, 78, 966, 1587, 2177, 4423, 4935, 5005
BsaWI WCCGGW 3 cut(s) 172, 187, 4683
BsaXI ACNNNNNCTCC 8 cut(s) 67, 97, 687, 717, 1518, 1548, 3348, 3378
Bsc4I CCNNNNNNNGG 4 cut(s) 3405, 3601, 4428, 5018
Bse118I RCCGGY 3 cut(s) 674, 4683, 5029
Bse1I ACTGG 6 cut(s) 833, 1067, 1481, 1528, 3096, 3876
Bse3DI GCAATG 2 cut(s) 3682, 4979
Bse8I GATNNNNATC 3 cut(s) 2134, 2979, 3468
BseAI TCCGGA 1 cut(s) 187
BseBI CCWGG 3 cut(s) 1589, 2720, 2885
BseCI ATCGAT 1 cut(s) 1008
BseDI CCNNGG 8 cut(s) 21, 78, 966, 1587, 2177, 4423, 4935, 5005
BseJI GATNNNNATC 3 cut(s) 2134, 2979, 3468
BseLI CCNNNNNNNGG 4 cut(s) 3405, 3601, 4428, 5018
BseMI GCAATG 2 cut(s) 3682, 4979
BseNI ACTGG 6 cut(s) 833, 1067, 1481, 1528, 3096, 3876
BsePI GCGCGC 1 cut(s) 559
BseYI CCCAGC 2 cut(s) 1619, 3645
BsgI GTGCAG 3 cut(s) 2711, 4469, 5073
Bsh1236I CGCG 3 cut(s) 561, 3222, 4859
BshFI GGCC 4 cut(s) 51, 1624, 3166, 4421
BshNI GGYRCC 1 cut(s) 155
BshTI ACCGGT 1 cut(s) 4683
BshVI ATCGAT 1 cut(s) 1008
BsiHKAI GWGCWC 7 cut(s) 230, 300, 2675, 2840, 3081, 4260, 4272
BsiHKCI CYCGRG 4 cut(s) 1683, 2865, 4259, 4542
BsiSI CCGG 8 cut(s) 48, 118, 173, 188, 675, 999, 4684, 5030
BslFI GGGAC 6 cut(s) 932, 2786, 2951, 3381, 3628, 3741
BslI CCNNNNNNNGG 4 cut(s) 3405, 3601, 4428, 5018
BsmBI CGTCTC 1 cut(s) 3875
BsmFI GGGAC 6 cut(s) 932, 2786, 2951, 3381, 3628, 3741
BsmI GAATGC 5 cut(s) 511, 2655, 2729, 3690, 5133
BsnI GGCC 4 cut(s) 51, 1624, 3166, 4421
Bso31I GGTCTC 3 cut(s) 539, 648, 2551
BsoBI CYCGRG 4 cut(s) 1683, 2865, 4259, 4542
Bsp119I TTCGAA 1 cut(s) 2010
Bsp1286I GDGCHC 7 cut(s) 230, 300, 2675, 2840, 3081, 4260, 4272
Bsp13I TCCGGA 1 cut(s) 187
Bsp1407I TGTACA 1 cut(s) 4885
Bsp1720I GCTNAGC 3 cut(s) 306, 1461, 4473
BspANI GGCC 4 cut(s) 51, 1624, 3166, 4421
BspDI ATCGAT 1 cut(s) 1008
BspEI TCCGGA 1 cut(s) 187
BspFNI CGCG 3 cut(s) 561, 3222, 4859
BspHI TCATGA 1 cut(s) 3933
BspMAI CTGCAG 3 cut(s) 2859, 4072, 4537
BspMI ACCTGC 5 cut(s) 494, 539, 2683, 2848, 3298
BspOI GCTAGC 1 cut(s) 861
BspPI GGATC 9 cut(s) 2715, 2800, 2880, 2965, 3187, 3586, 4554, 4728, 4884
BspQI GCTCTTC 1 cut(s) 5199
BspT104I TTCGAA 1 cut(s) 2010
BspT107I GGYRCC 1 cut(s) 155
BspTNI GGTCTC 3 cut(s) 539, 648, 2551
BsrBI CCGCTC 4 cut(s) 551, 2335, 4765, 4819
BsrDI GCAATG 2 cut(s) 3682, 4979
BsrFI RCCGGY 3 cut(s) 674, 4683, 5029
BsrGI TGTACA 1 cut(s) 4885
BsrI ACTGG 6 cut(s) 833, 1067, 1481, 1528, 3096, 3876
BssAI RCCGGY 3 cut(s) 674, 4683, 5029
BssECI CCNNGG 8 cut(s) 21, 78, 966, 1587, 2177, 4423, 4935, 5005
BssHII GCGCGC 1 cut(s) 559
BssNAI GTATAC 2 cut(s) 1271, 3900
BssNI GRCGYC 1 cut(s) 156
BssSI CACGAG 2 cut(s) 2554, 4353
BssT1I CCWWGG 3 cut(s) 966, 4423, 5005
Bst1107I GTATAC 2 cut(s) 1271, 3900
Bst2BI CACGAG 2 cut(s) 2554, 4353
Bst2UI CCWGG 3 cut(s) 1589, 2720, 2885
BstACI GRCGYC 1 cut(s) 156
BstAPI GCANNNNNTGC 4 cut(s) 854, 1229, 4571, 4841
BstAUI TGTACA 1 cut(s) 4885
BstBAI YACGTR 1 cut(s) 1538
BstBI TTCGAA 1 cut(s) 2010
BstDSI CCRYGG 2 cut(s) 21, 2177
BstFNI CGCG 3 cut(s) 561, 3222, 4859
BstH2I RGCGCY 2 cut(s) 159, 4662
BstHHI GCGC 7 cut(s) 158, 561, 563, 1039, 3224, 4661, 4727
BstNI CCWGG 3 cut(s) 1589, 2720, 2885
BstPAI GACNNNNGTC 1 cut(s) 2430
BstSCI CCNGG 4 cut(s) 116, 1587, 2718, 2883
BstSFI CTRYAG 8 cut(s) 1638, 1965, 2049, 2855, 3273, 3292, 4068, 4533
BstUI CGCG 3 cut(s) 561, 3222, 4859
BstV2I GAAGAC 7 cut(s) 132, 244, 1589, 1656, 2424, 3771, 4445
BstX2I RGATCY 7 cut(s) 2792, 2957, 3192, 3591, 4634, 4733, 4876
BstXI CCANNNNNNTGG 1 cut(s) 665
BstYI RGATCY 7 cut(s) 2792, 2957, 3192, 3591, 4634, 4733, 4876
BstZ17I GTATAC 2 cut(s) 1271, 3900
Bsu15I ATCGAT 1 cut(s) 1008
BsuI GTATCC 1 cut(s) 3808
BsuRI GGCC 4 cut(s) 51, 1624, 3166, 4421
BsuTUI ATCGAT 1 cut(s) 1008
BtgI CCRYGG 2 cut(s) 21, 2177
BtsI GCAGTG 3 cut(s) 288, 868, 1852
BveI ACCTGC 5 cut(s) 494, 539, 2683, 2848, 3298
CaiI CAGNNNCTG 1 cut(s) 1423
CciI TCATGA 1 cut(s) 3933
CfoI GCGC 7 cut(s) 158, 561, 563, 1039, 3224, 4661, 4727
Cfr10I RCCGGY 3 cut(s) 674, 4683, 5029
ClaI ATCGAT 1 cut(s) 1008
CpoI CGGWCCG 1 cut(s) 636
Csp6I GTAC 7 cut(s) 7, 1535, 2822, 3423, 3948, 4886, 5146
CspAI ACCGGT 1 cut(s) 4683
CspI CGGWCCG 1 cut(s) 636
CviQI GTAC 7 cut(s) 7, 1535, 2822, 3423, 3948, 4886, 5146
DinI GGCGCC 1 cut(s) 157
DraI TTTAAA 1 cut(s) 1711
DriI GACNNNNNGTC 1 cut(s) 2524
EaeI YGGCCR 1 cut(s) 49
Eam1105I GACNNNNNGTC 1 cut(s) 2524
Ecl136II GAGCTC 3 cut(s) 228, 298, 4258
Eco130I CCWWGG 3 cut(s) 966, 4423, 5005
Eco24I GRGCYC 3 cut(s) 230, 300, 4260
Eco31I GGTCTC 3 cut(s) 539, 648, 2551
Eco32I GATATC 1 cut(s) 3337
Eco47I GGWCC 9 cut(s) 636, 919, 1310, 2773, 2938, 3395, 3728, 4686, 5009
Eco53kI GAGCTC 3 cut(s) 228, 298, 4258
Eco57I CTGAAG 9 cut(s) 840, 2550, 2721, 3381, 3525, 3587, 3684, 3753, 4010
Eco88I CYCGRG 4 cut(s) 1683, 2865, 4259, 4542
EcoICRI GAGCTC 3 cut(s) 228, 298, 4258
EcoO109I RGGNCCY 3 cut(s) 2773, 2938, 3728
EcoRI GAATTC 1 cut(s) 275
EcoRII CCWGG 3 cut(s) 1587, 2718, 2883
EcoRV GATATC 1 cut(s) 3337
EcoT14I CCWWGG 3 cut(s) 966, 4423, 5005
EcoT22I ATGCAT 2 cut(s) 1498, 3690
EcoT38I GRGCYC 3 cut(s) 230, 300, 4260
EgeI GGCGCC 1 cut(s) 157
EheI GGCGCC 1 cut(s) 157
ErhI CCWWGG 3 cut(s) 966, 4423, 5005
Esp3I CGTCTC 1 cut(s) 3875
FalI AAGNNNNNCTT 2 cut(s) 4624, 4656
FaqI GGGAC 6 cut(s) 932, 2786, 2951, 3381, 3628, 3741
FauI CCCGC 1 cut(s) 2328
FauNDI CATATG 1 cut(s) 2401
FblI GTMKAC 4 cut(s) 1200, 1270, 3288, 3899
FriOI GRGCYC 3 cut(s) 230, 300, 4260
FspBI CTAG 8 cut(s) 858, 1362, 2799, 2964, 3405, 4236, 4665, 4697
FspI TGCGCA 1 cut(s) 1038
GlaI GCGC 7 cut(s) 157, 560, 562, 1038, 3223, 4660, 4726
GsaI CCCAGC 2 cut(s) 1623, 3649
GsuI CTGGAG 5 cut(s) 975, 1050, 1464, 1545, 2906
HaeII RGCGCY 2 cut(s) 159, 4662
HaeIII GGCC 4 cut(s) 51, 1624, 3166, 4421
HapII CCGG 8 cut(s) 48, 118, 173, 188, 675, 999, 4684, 5030
HhaI GCGC 7 cut(s) 158, 561, 563, 1039, 3224, 4661, 4727
Hin1I GRCGYC 1 cut(s) 156
Hin6I GCGC 7 cut(s) 156, 559, 561, 1037, 3222, 4659, 4725
HinP1I GCGC 7 cut(s) 156, 559, 561, 1037, 3222, 4659, 4725
HindIII AAGCTT 5 cut(s) 207, 233, 2213, 3266, 5073
HpaII CCGG 8 cut(s) 48, 118, 173, 188, 675, 999, 4684, 5030
Hpy99I CGWCG 2 cut(s) 68, 604
HpyCH4IV ACGT 4 cut(s) 1537, 4510, 4811, 4840
HpySE526I ACGT 4 cut(s) 1537, 4510, 4811, 4840
Hsp92I GRCGYC 1 cut(s) 156
HspAI GCGC 7 cut(s) 156, 559, 561, 1037, 3222, 4659, 4725
KasI GGCGCC 1 cut(s) 155
Kpn2I TCCGGA 1 cut(s) 187
LguI GCTCTTC 1 cut(s) 5199
MaeI CTAG 8 cut(s) 858, 1362, 2799, 2964, 3405, 4236, 4665, 4697
MaeII ACGT 4 cut(s) 1537, 4510, 4811, 4840
MbiI CCGCTC 4 cut(s) 551, 2335, 4765, 4819
MfeI CAATTG 2 cut(s) 738, 1791
MflI RGATCY 7 cut(s) 2792, 2957, 3192, 3591, 4634, 4733, 4876
MhlI GDGCHC 7 cut(s) 230, 300, 2675, 2840, 3081, 4260, 4272
Mly113I GGCGCC 1 cut(s) 156
MlyI GAGTC 9 cut(s) 443, 1332, 1408, 1745, 1889, 2440, 2857, 3287, 4709
MmeI TCCRAC 4 cut(s) 1745, 2074, 2617, 4794
Mph1103I ATGCAT 2 cut(s) 1498, 3690
MroI TCCGGA 1 cut(s) 187
MroXI GAANNNNTTC 5 cut(s) 208, 1605, 1955, 2081, 5192
MseI TTAA 9 cut(s) 450, 753, 867, 1137, 1710, 2039, 2511, 3450, 3711
MslI CAYNNNNRTG 1 cut(s) 1734
MspA1I CMGCKG 3 cut(s) 665, 1220, 1460
MspI CCGG 8 cut(s) 48, 118, 173, 188, 675, 999, 4684, 5030
MspR9I CCNGG 4 cut(s) 118, 1589, 2720, 2885
MunI CAATTG 2 cut(s) 738, 1791
Mva1269I GAATGC 5 cut(s) 511, 2655, 2729, 3690, 5133
MvaI CCWGG 3 cut(s) 1589, 2720, 2885
MvnI CGCG 3 cut(s) 561, 3222, 4859
NarI GGCGCC 1 cut(s) 156
NciI CCSGG 1 cut(s) 118
NdeI CATATG 1 cut(s) 2401
NheI GCTAGC 1 cut(s) 857
NmeAIII GCCGAG 2 cut(s) 59, 4960
NmuCI GTSAC 6 cut(s) 363, 2591, 2695, 2860, 3233, 3998
NsbI TGCGCA 1 cut(s) 1038
NsiI ATGCAT 2 cut(s) 1498, 3690
NspV TTCGAA 1 cut(s) 2010
PaeI GCATGC 2 cut(s) 1081, 2374
PaeR7I CTCGAG 3 cut(s) 1683, 2865, 4259
PagI TCATGA 1 cut(s) 3933
PaqCI CACCTGC 3 cut(s) 494, 2683, 2848
PauI GCGCGC 1 cut(s) 559
PciI ACATGT 5 cut(s) 2227, 2240, 2305, 2803, 2968
PciSI GCTCTTC 1 cut(s) 5199
PcsI WCGNNNNNNNCGW 3 cut(s) 605, 4342, 4351
PctI GAATGC 5 cut(s) 511, 2655, 2729, 3690, 5133
PdmI GAANNNNTTC 5 cut(s) 208, 1605, 1955, 2081, 5192
PinAI ACCGGT 1 cut(s) 4683
PleI GAGTC 9 cut(s) 442, 1331, 1408, 1745, 1889, 2439, 2857, 3286, 4708
PluTI GGCGCC 1 cut(s) 159
PpsI GAGTC 9 cut(s) 442, 1331, 1408, 1745, 1889, 2439, 2857, 3286, 4708
Ppu21I YACGTR 1 cut(s) 1538
PpuMI RGGWCCY 3 cut(s) 2773, 2938, 3728
PscI ACATGT 5 cut(s) 2227, 2240, 2305, 2803, 2968
PshAI GACNNNNGTC 1 cut(s) 2430
PshBI ATTAAT 1 cut(s) 3711
Psp124BI GAGCTC 3 cut(s) 230, 300, 4260
Psp5II RGGWCCY 3 cut(s) 2773, 2938, 3728
Psp6I CCWGG 3 cut(s) 1587, 2718, 2883
PspFI CCCAGC 2 cut(s) 1619, 3645
PspGI CCWGG 3 cut(s) 1587, 2718, 2883
PspPPI RGGWCCY 3 cut(s) 2773, 2938, 3728
PstI CTGCAG 3 cut(s) 2859, 4072, 4537
PstNI CAGNNNCTG 1 cut(s) 1423
PsuI RGATCY 7 cut(s) 2792, 2957, 3192, 3591, 4634, 4733, 4876
PteI GCGCGC 1 cut(s) 559
PvuII CAGCTG 2 cut(s) 665, 1220
RsaI GTAC 7 cut(s) 8, 1536, 2823, 3424, 3949, 4887, 5147
RsaNI GTAC 7 cut(s) 7, 1535, 2822, 3423, 3948, 4886, 5146
RseI CAYNNNNRTG 1 cut(s) 1734
Rsr2I CGGWCCG 1 cut(s) 636
RsrII CGGWCCG 1 cut(s) 636
SacI GAGCTC 3 cut(s) 230, 300, 4260
SapI GCTCTTC 1 cut(s) 5199
SaqAI TTAA 9 cut(s) 450, 753, 867, 1137, 1710, 2039, 2511, 3450, 3711
SchI GAGTC 9 cut(s) 443, 1332, 1408, 1745, 1889, 2440, 2857, 3287, 4709
ScrFI CCNGG 4 cut(s) 118, 1589, 2720, 2885
SduI GDGCHC 7 cut(s) 230, 300, 2675, 2840, 3081, 4260, 4272
SfcI CTRYAG 8 cut(s) 1638, 1965, 2049, 2855, 3273, 3292, 4068, 4533
SfoI GGCGCC 1 cut(s) 157
Sfr274I CTCGAG 3 cut(s) 1683, 2865, 4259
SfuI TTCGAA 1 cut(s) 2010
SinI GGWCC 9 cut(s) 636, 919, 1310, 2773, 2938, 3395, 3728, 4686, 5009
SlaI CTCGAG 3 cut(s) 1683, 2865, 4259
SmiMI CAYNNNNRTG 1 cut(s) 1734
SmlI CTYRAG 7 cut(s) 1260, 1683, 2142, 2865, 3455, 3982, 4259
SmoI CTYRAG 7 cut(s) 1260, 1683, 2142, 2865, 3455, 3982, 4259
SphI GCATGC 2 cut(s) 1081, 2374
SspDI GGCGCC 1 cut(s) 155
SspI AATATT 4 cut(s) 406, 2089, 3769, 4598
SspMI CTAG 8 cut(s) 858, 1362, 2799, 2964, 3405, 4236, 4665, 4697
SstI GAGCTC 3 cut(s) 230, 300, 4260
StyD4I CCNGG 4 cut(s) 116, 1587, 2718, 2883
StyI CCWWGG 3 cut(s) 966, 4423, 5005
TaiI ACGT 4 cut(s) 1540, 4513, 4814, 4843
TaqII GACCGA 2 cut(s) 624, 2575
TatI WGTACW 3 cut(s) 3947, 4885, 5145
TauI GCSGC 4 cut(s) 150, 161, 914, 4847
Tru1I TTAA 9 cut(s) 450, 753, 867, 1137, 1710, 2039, 2511, 3450, 3711
Tru9I TTAA 9 cut(s) 450, 753, 867, 1137, 1710, 2039, 2511, 3450, 3711
TseFI GTSAC 6 cut(s) 363, 2591, 2695, 2860, 3233, 3998
Tsp45I GTSAC 6 cut(s) 363, 2591, 2695, 2860, 3233, 3998
TspGWI ACGGA 8 cut(s) 10, 628, 1917, 2009, 3899, 4435, 4628, 4843
VpaK11BI GGWCC 9 cut(s) 636, 919, 1310, 2773, 2938, 3395, 3728, 4686, 5009
VspI ATTAAT 1 cut(s) 3711
XbaI TCTAGA 3 cut(s) 1361, 4664, 4696
XhoI CTCGAG 3 cut(s) 1683, 2865, 4259
XmiI GTMKAC 4 cut(s) 1200, 1270, 3288, 3899
XmnI GAANNNNTTC 5 cut(s) 208, 1605, 1955, 2081, 5192
XspI CTAG 8 cut(s) 858, 1362, 2799, 2964, 3405, 4236, 4665, 4697
Zsp2I ATGCAT 2 cut(s) 1498, 3690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.