RchiOBHm_Chr6g0307081

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
65603743 .. 65607399
3657 bp
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UTR
Exon/CDS
Intron
PRQ27609

Sequence Viewer

Length: 225 bp
ATGAATCTCAATCCCTTTCACCCTCTCAAGCTCACACACACTCTCATCCTCCTGCGATTCCGGCAAAGCAAGTTTGGGTATGGAAGTTTTGGGTATAGAAGTTTGGGTAAAGTAAGTTTGGGTAAGCGATTTCGGCAAATTAGCTTTCGGTATACAAGTTTTCTGAAACCCATCTCTCAACAAGAATACAGTGTGACCAAATTTGCTTCACTTGCCCAGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

74

Amino Acids

8.68

Weight (kDa)

11.12

Isoelectric Point (pI)

27.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 152
AcsI RAATTY 1 cut(s) 200
AluBI AGCT 2 cut(s) 31, 144
AluI AGCT 2 cut(s) 31, 144
ApoI RAATTY 1 cut(s) 200
AsuHPI GGTGA 1 cut(s) 11
BccI CCATC 1 cut(s) 179
BmrI ACTGGG 1 cut(s) 211
BmuI ACTGGG 1 cut(s) 211
BpuEI CTTGAG 1 cut(s) 11
Bse1I ACTGG 1 cut(s) 217
BseGI GGATG 1 cut(s) 45
BseNI ACTGG 1 cut(s) 217
BsiSI CCGG 1 cut(s) 61
BsrI ACTGG 1 cut(s) 217
BssNAI GTATAC 1 cut(s) 153
Bst1107I GTATAC 1 cut(s) 153
Bst4CI ACNGT 1 cut(s) 191
BstF5I GGATG 1 cut(s) 45
BstMWI GCNNNNNNNGC 3 cut(s) 61, 133, 212
BstZ17I GTATAC 1 cut(s) 153
BtsCI GGATG 1 cut(s) 45
BtsIMutI CAGTG 1 cut(s) 196
CviJI RGCY 2 cut(s) 31, 144
CviKI_1 RGCY 2 cut(s) 31, 144
FaiI YATR 3 cut(s) 81, 96, 153
FblI GTMKAC 1 cut(s) 152
FokI GGATG 1 cut(s) 32
HapII CCGG 1 cut(s) 61
HinfI GANTC 2 cut(s) 4, 57
HpaII CCGG 1 cut(s) 61
HphI GGTGA 1 cut(s) 11
Hpy166II GTNNAC 1 cut(s) 153
Hpy188I TCNGA 1 cut(s) 165
Hpy8I GTNNAC 1 cut(s) 153
HpyCH4III ACNGT 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 3 cut(s) 61, 133, 212
LpnPI CCDG 2 cut(s) 65, 74
MaeIII GTNAC 1 cut(s) 193
MluCI AATT 2 cut(s) 138, 200
MnlI CCTC 2 cut(s) 33, 59
MseI TTAA 1 cut(s) 223
MspI CCGG 1 cut(s) 61
MwoI GCNNNNNNNGC 3 cut(s) 61, 133, 212
NmuCI GTSAC 1 cut(s) 193
PfeI GAWTC 2 cut(s) 4, 57
SaqAI TTAA 1 cut(s) 223
SetI ASST 2 cut(s) 33, 146
SgeI CNNG 6 cut(s) 40, 64, 73, 82, 168, 194
SmlI CTYRAG 1 cut(s) 26
SmoI CTYRAG 1 cut(s) 26
Sse9I AATT 2 cut(s) 138, 200
TaaI ACNGT 1 cut(s) 191
TasI AATT 2 cut(s) 138, 200
TfiI GAWTC 2 cut(s) 4, 57
Tru1I TTAA 1 cut(s) 223
Tru9I TTAA 1 cut(s) 223
TscAI CASTG 1 cut(s) 196
TseFI GTSAC 1 cut(s) 193
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 196
XapI RAATTY 1 cut(s) 200
XmiI GTMKAC 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.