Rh7DG397600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
54538594 .. 54554629
16036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG397600.1

Sequence Viewer

Length: 279 bp
ATGGAAGTTTTGGGTATAGAAGTTTGGCAAAGCATAGACGTCTTCAAGTTTGGTTCGATTTCTGGTTCGATTTCGAATTCTTCAAGCTTGATCAAAATCAATGAAGCAAATGGCTCCATAGTCAAAGGCATCAATCTAGACGTGGAAACCTTTACGCCACAAACAGGAAATGAAACAACAACTTTCACACTAGCCCATCCTTTTCCTGACAAAAAAGAGTCCCTGATAAACAAAACAGTTCGCAGGATGAGGATTGTCAAGCGGTGGATTACACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

92

Amino Acids

10.27

Weight (kDa)

9.22

Isoelectric Point (pI)

37.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 42
AciI CCGC 1 cut(s) 262
AcsI RAATTY 1 cut(s) 76
AcyI GRCGYC 1 cut(s) 39
AfiI CCNNNNNNNGG 1 cut(s) 164
AgsI TTSAA 2 cut(s) 46, 84
AjiI CACGTC 1 cut(s) 142
AluBI AGCT 1 cut(s) 87
AluI AGCT 1 cut(s) 87
ApoI RAATTY 1 cut(s) 76
AsuII TTCGAA 1 cut(s) 74
BbsI GAAGAC 1 cut(s) 34
BccI CCATC 1 cut(s) 204
BclI TGATCA 1 cut(s) 90
BfaI CTAG 2 cut(s) 137, 191
BmgBI CACGTC 1 cut(s) 142
BmiI GGNNCC 1 cut(s) 115
BmsI GCATC 1 cut(s) 138
BpiI GAAGAC 1 cut(s) 34
Bpu14I TTCGAA 1 cut(s) 74
BsaBI GATNNNNATC 1 cut(s) 95
BsaHI GRCGYC 1 cut(s) 39
Bsc4I CCNNNNNNNGG 1 cut(s) 164
Bse8I GATNNNNATC 1 cut(s) 95
BseGI GGATG 2 cut(s) 196, 252
BseJI GATNNNNATC 1 cut(s) 95
BseLI CCNNNNNNNGG 1 cut(s) 164
BslFI GGGAC 1 cut(s) 205
BslI CCNNNNNNNGG 1 cut(s) 164
BsmFI GGGAC 1 cut(s) 205
Bsp119I TTCGAA 1 cut(s) 74
Bsp143I GATC 1 cut(s) 90
BspACI CCGC 1 cut(s) 262
BspLI GGNNCC 1 cut(s) 115
BspT104I TTCGAA 1 cut(s) 74
BssMI GATC 1 cut(s) 90
BssNI GRCGYC 1 cut(s) 39
Bst4CI ACNGT 1 cut(s) 238
BstACI GRCGYC 1 cut(s) 39
BstBI TTCGAA 1 cut(s) 74
BstF5I GGATG 2 cut(s) 196, 252
BstKTI GATC 1 cut(s) 93
BstMBI GATC 1 cut(s) 90
BstV2I GAAGAC 1 cut(s) 34
BtrI CACGTC 1 cut(s) 142
BtsCI GGATG 2 cut(s) 196, 252
CviJI RGCY 3 cut(s) 87, 114, 194
CviKI_1 RGCY 3 cut(s) 87, 114, 194
DpnI GATC 1 cut(s) 92
DpnII GATC 1 cut(s) 90
EcoRI GAATTC 1 cut(s) 76
FaiI YATR 4 cut(s) 17, 35, 119, 277
FaqI GGGAC 1 cut(s) 205
FbaI TGATCA 1 cut(s) 90
FokI GGATG 2 cut(s) 183, 259
FspBI CTAG 2 cut(s) 137, 191
Hin1I GRCGYC 1 cut(s) 39
HindIII AAGCTT 1 cut(s) 85
HinfI GANTC 1 cut(s) 218
Hpy188III TCNNGA 2 cut(s) 137, 206
HpyCH4III ACNGT 1 cut(s) 238
HpyCH4IV ACGT 2 cut(s) 39, 141
HpySE526I ACGT 2 cut(s) 39, 141
Hsp92I GRCGYC 1 cut(s) 39
Ksp22I TGATCA 1 cut(s) 90
Kzo9I GATC 1 cut(s) 90
LmnI GCTCC 1 cut(s) 119
LpnPI CCDG 5 cut(s) 48, 150, 219, 229, 236
LweI GCATC 1 cut(s) 138
MaeI CTAG 2 cut(s) 137, 191
MaeII ACGT 2 cut(s) 39, 141
MalI GATC 1 cut(s) 92
MboI GATC 1 cut(s) 90
MboII GAAGA 2 cut(s) 34, 72
MluCI AATT 1 cut(s) 76
MlyI GAGTC 1 cut(s) 227
MnlI CCTC 1 cut(s) 243
NdeII GATC 1 cut(s) 90
NlaIV GGNNCC 1 cut(s) 115
NspV TTCGAA 1 cut(s) 74
PleI GAGTC 1 cut(s) 226
PpsI GAGTC 1 cut(s) 226
PspN4I GGNNCC 1 cut(s) 115
Sau3AI GATC 1 cut(s) 90
SchI GAGTC 1 cut(s) 227
SetI ASST 4 cut(s) 42, 89, 144, 152
SfaNI GCATC 1 cut(s) 138
SfuI TTCGAA 1 cut(s) 74
Sse9I AATT 1 cut(s) 76
SsiI CCGC 1 cut(s) 262
SspMI CTAG 2 cut(s) 137, 191
TaaI ACNGT 1 cut(s) 238
TaiI ACGT 2 cut(s) 42, 144
TaqI TCGA 3 cut(s) 56, 68, 74
TasI AATT 1 cut(s) 76
TspDTI ATGAA 2 cut(s) 117, 186
XapI RAATTY 1 cut(s) 76
XbaI TCTAGA 1 cut(s) 136
XspI CTAG 2 cut(s) 137, 191
ZraI GACGTC 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.