Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000456

Physical Location & Seq

Genomic Coordinates Forward (+)

15718434 .. 15719395

Gene Structure 962 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17709

Sequence Viewer

CDS Protein Promoter (2k)

Length: 660 bp

ATGGAACCACGAACTCTGCAACTAATGGAGTTACAAACCCAGCAACAAATGGAATTACAAGCCCAGCAACCAACCGAGGAGGGAGGAAGCATCCAAGCAGCCGGGAGTAGTAACCGGTGGGCTCCCACACCGCCTCAACTAAGAATCCTCAAGGGCCTTTACTATGATAAGGGTTTTAAGTACCCAACTCCAGAGCAGATTCAAGAGATCTGCCTTCATCTGAAACAGTATGGGCAGATCGAGGACAAGAACGTCTTCTTTTGGTTCAAGAACCTCAAGGCTCGTGAGAGGCAGAAGTTGAAGGAATTTCGGAACGTTCGGGTTGGTGGCTCTCTCGATCTCAATTTTGGATCCACTAGTTCTACTGATGATGGTAGGTCCATTGATCTAAACTTTGGTTCCACTGGTTCTACTAGTACTGACAGATCCATTGATCTAAATTTTGGGTCACGTGTCGGCTATGGTGTTGATGGATCGATCATGGAACAACGAGGAGAATATCACCAGGAGATTGAAACCCTTCCACTATTCCCCATGCATGGTGAGGACATCTTTGGCAACATGAAGACTACTTCCGAGGGAGGTAGCGGTTATGGCGGTGGCTCTCGCATTTCCCTTGAGCTCAGCCTCAACTCCTACGGAAATGCAGACATAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

219

Amino Acids

24.43

Weight (kDa)

5.18

Isoelectric Point (pI)

45.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	38 - 98	1e-09	Homeodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000456)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr0c31g0501381 RchiOBHm_Chr1g0370351 RchiOBHm_Chr1g0371601 RchiOBHm_Chr1g0371691 RchiOBHm_Chr1g0372721 RchiOBHm_Chr1g0373691 RchiOBHm_Chr1g0374771 RchiOBHm_Chr1g0376901 RchiOBHm_Chr2g0121101 RchiOBHm_Chr2g0121131 RchiOBHm_Chr2g0121261 RchiOBHm_Chr2g0121411 RchiOBHm_Chr2g0121451 RchiOBHm_Chr2g0122031 RchiOBHm_Chr2g0122181 RchiOBHm_Chr2g0122361 RchiOBHm_Chr2g0122821 RchiOBHm_Chr2g0123341 RchiOBHm_Chr2g0123561 RchiOBHm_Chr2g0124121 RchiOBHm_Chr2g0124171 RchiOBHm_Chr2g0124261 RchiOBHm_Chr2g0124861 RchiOBHm_Chr2g0125451 RchiOBHm_Chr2g0125611 RchiOBHm_Chr2g0125711 RchiOBHm_Chr2g0125821 RchiOBHm_Chr2g0125951 RchiOBHm_Chr2g0126051 RchiOBHm_Chr2g0126461 RchiOBHm_Chr2g0126641 RchiOBHm_Chr2g0126791 RchiOBHm_Chr2g0126801 RchiOBHm_Chr2g0127011 RchiOBHm_Chr2g0127111 RchiOBHm_Chr2g0127221 RchiOBHm_Chr2g0127271 RchiOBHm_Chr2g0127481 RchiOBHm_Chr2g0128751 RchiOBHm_Chr2g0129721 RchiOBHm_Chr2g0129861 RchiOBHm_Chr2g0130621 RchiOBHm_Chr2g0130751 RchiOBHm_Chr2g0131011 RchiOBHm_Chr2g0131881 RchiOBHm_Chr2g0132391 RchiOBHm_Chr2g0132721 RchiOBHm_Chr2g0133491 RchiOBHm_Chr2g0133801 RchiOBHm_Chr2g0134381 RchiOBHm_Chr2g0135011 RchiOBHm_Chr2g0135621 RchiOBHm_Chr2g0136931 RchiOBHm_Chr2g0136971 RchiOBHm_Chr2g0138201 RchiOBHm_Chr2g0145771 RchiOBHm_Chr2g0146881 RchiOBHm_Chr2g0147201 RchiOBHm_Chr2g0148581 RchiOBHm_Chr2g0149121 RchiOBHm_Chr2g0155421 RchiOBHm_Chr2g0158921 RchiOBHm_Chr2g0158991 RchiOBHm_Chr2g0162461 RchiOBHm_Chr2g0163911 RchiOBHm_Chr2g0165271 RchiOBHm_Chr2g0165711 RchiOBHm_Chr2g0169451 RchiOBHm_Chr2g0169811 RchiOBHm_Chr2g0170901 RchiOBHm_Chr2g0171171 RchiOBHm_Chr3g0448741 RchiOBHm_Chr3g0448761 RchiOBHm_Chr3g0449851 RchiOBHm_Chr3g0450611 RchiOBHm_Chr3g0462491 RchiOBHm_Chr3g0462861 RchiOBHm_Chr3g0462891 RchiOBHm_Chr3g0462901 RchiOBHm_Chr3g0464701 RchiOBHm_Chr3g0464791 RchiOBHm_Chr3g0464871 RchiOBHm_Chr3g0467561 RchiOBHm_Chr3g0469431 RchiOBHm_Chr3g0469821 RchiOBHm_Chr7g0186381 RchiOBHm_Chr7g0197961 RchiOBHm_Chr7g0198171 RchiOBHm_Chr7g0198701 RchiOBHm_Chr7g0200721 RchiOBHm_Chr7g0201031 RchiOBHm_Chr7g0201551

Species

Orthologous Gene IDs

rosa_chinensis

RchiOBHm_Chr0c31g0501381 RchiOBHm_Chr1g0370351 RchiOBHm_Chr1g0371601 RchiOBHm_Chr1g0371691 RchiOBHm_Chr1g0372721 RchiOBHm_Chr1g0373691 RchiOBHm_Chr1g0374771 RchiOBHm_Chr1g0376901 RchiOBHm_Chr2g0121101 RchiOBHm_Chr2g0121131 RchiOBHm_Chr2g0121261 RchiOBHm_Chr2g0121411 RchiOBHm_Chr2g0121451 RchiOBHm_Chr2g0122031 RchiOBHm_Chr2g0122181 RchiOBHm_Chr2g0122361 RchiOBHm_Chr2g0122821 RchiOBHm_Chr2g0123341 RchiOBHm_Chr2g0123561 RchiOBHm_Chr2g0124121 RchiOBHm_Chr2g0124171 RchiOBHm_Chr2g0124261 RchiOBHm_Chr2g0124861 RchiOBHm_Chr2g0125451 RchiOBHm_Chr2g0125611 RchiOBHm_Chr2g0125711 RchiOBHm_Chr2g0125821 RchiOBHm_Chr2g0125951 RchiOBHm_Chr2g0126051 RchiOBHm_Chr2g0126461 RchiOBHm_Chr2g0126641 RchiOBHm_Chr2g0126791 RchiOBHm_Chr2g0126801 RchiOBHm_Chr2g0127011 RchiOBHm_Chr2g0127111 RchiOBHm_Chr2g0127221 RchiOBHm_Chr2g0127271 RchiOBHm_Chr2g0127481 RchiOBHm_Chr2g0128751 RchiOBHm_Chr2g0129721 RchiOBHm_Chr2g0129861 RchiOBHm_Chr2g0130621 RchiOBHm_Chr2g0130751 RchiOBHm_Chr2g0131011 RchiOBHm_Chr2g0131881 RchiOBHm_Chr2g0132391 RchiOBHm_Chr2g0132721 RchiOBHm_Chr2g0133491 RchiOBHm_Chr2g0133801 RchiOBHm_Chr2g0134381 RchiOBHm_Chr2g0135011 RchiOBHm_Chr2g0135621 RchiOBHm_Chr2g0136931 RchiOBHm_Chr2g0136971 RchiOBHm_Chr2g0138201 RchiOBHm_Chr2g0145771 RchiOBHm_Chr2g0146881 RchiOBHm_Chr2g0147201 RchiOBHm_Chr2g0148581 RchiOBHm_Chr2g0149121 RchiOBHm_Chr2g0155421 RchiOBHm_Chr2g0158921 RchiOBHm_Chr2g0158991 RchiOBHm_Chr2g0162461 RchiOBHm_Chr2g0163911 RchiOBHm_Chr2g0165271 RchiOBHm_Chr2g0165711 RchiOBHm_Chr2g0169451 RchiOBHm_Chr2g0169811 RchiOBHm_Chr2g0170901 RchiOBHm_Chr2g0171171 RchiOBHm_Chr3g0448741 RchiOBHm_Chr3g0448761 RchiOBHm_Chr3g0449851 RchiOBHm_Chr3g0450611 RchiOBHm_Chr3g0462491 RchiOBHm_Chr3g0462861 RchiOBHm_Chr3g0462891 RchiOBHm_Chr3g0462901 RchiOBHm_Chr3g0464701 RchiOBHm_Chr3g0464791 RchiOBHm_Chr3g0464871 RchiOBHm_Chr3g0467561 RchiOBHm_Chr3g0469431 RchiOBHm_Chr3g0469821 RchiOBHm_Chr7g0186381 RchiOBHm_Chr7g0197961 RchiOBHm_Chr7g0198171 RchiOBHm_Chr7g0198701 RchiOBHm_Chr7g0200721 RchiOBHm_Chr7g0201031 RchiOBHm_Chr7g0201551

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	251
AciI	CCGC	3 cut(s)	131, 588, 597
AclI	AACGTT	1 cut(s)	315
AclWI	GGATC	4 cut(s)	345, 358, 420, 481
AcsI	RAATTY	2 cut(s)	305, 439
AcvI	CACGTG	1 cut(s)	452
AfaI	GTAC	2 cut(s)	182, 418
AfiI	CCNNNNNNNGG	1 cut(s)	539
AflIII	ACRYGT	1 cut(s)	451
AgeI	ACCGGT	1 cut(s)	114
AgsI	TTSAA	4 cut(s)	203, 268, 301, 515
AhlI	ACTAGT	2 cut(s)	356, 413
AjnI	CCWGG	1 cut(s)	504
AluBI	AGCT	2 cut(s)	622, 656
AluI	AGCT	2 cut(s)	622, 656
Alw21I	GWGCWC	1 cut(s)	624
AlwI	GGATC	4 cut(s)	345, 358, 420, 481
AoxI	GGCC	1 cut(s)	154
ApeKI	GCWGC	1 cut(s)	98
ApoI	RAATTY	2 cut(s)	305, 439
AsiGI	ACCGGT	1 cut(s)	114
Asp700I	GAANNNNTTC	2 cut(s)	254, 519
AspS9I	GGNCC	2 cut(s)	154, 378
AsuC2I	CCSGG	1 cut(s)	103
AsuHPI	GGTGA	2 cut(s)	494, 554
AvaII	GGWCC	1 cut(s)	378
BamHI	GGATCC	1 cut(s)	350
BanII	GRGCYC	2 cut(s)	124, 624
BauI	CACGAG	1 cut(s)	282
BbrPI	CACGTG	1 cut(s)	452
BbsI	GAAGAC	2 cut(s)	247, 572
Bbv12I	GWGCWC	1 cut(s)	624
BbvI	GCAGC	1 cut(s)	110
BccI	CCATC	2 cut(s)	365, 464
BciT130I	CCWGG	1 cut(s)	506
BcnI	CCSGG	1 cut(s)	103
BcuI	ACTAGT	2 cut(s)	356, 413
BfaI	CTAG	2 cut(s)	357, 414
BglII	AGATCT	1 cut(s)	207
BisI	GCNGC	1 cut(s)	99
BlpI	GCTNAGC	1 cut(s)	623
BlsI	GCNGC	1 cut(s)	100
BmcAI	AGTACT	1 cut(s)	418
Bme1390I	CCNGG	2 cut(s)	103, 506
Bme18I	GGWCC	1 cut(s)	378
BmgT120I	GGNCC	2 cut(s)	154, 378
BmiI	GGNNCC	4 cut(s)	6, 123, 352, 400
BmrFI	CCNGG	2 cut(s)	103, 506
BmsI	GCATC	1 cut(s)	99
BpiI	GAAGAC	2 cut(s)	247, 572
BpmI	CTGGAG	1 cut(s)	174
Bpu1102I	GCTNAGC	1 cut(s)	623
BpuEI	CTTGAG	3 cut(s)	134, 260, 638
BpuMI	CCSGG	1 cut(s)	103
Bsa29I	ATCGAT	1 cut(s)	476
BsaAI	YACGTR	1 cut(s)	452
BsaJI	CCNNGG	2 cut(s)	75, 576
BsaWI	WCCGGW	1 cut(s)	114
Bsc4I	CCNNNNNNNGG	1 cut(s)	539
Bse118I	RCCGGY	1 cut(s)	114
Bse1I	ACTGG	1 cut(s)	409
BseBI	CCWGG	1 cut(s)	506
BseCI	ATCGAT	1 cut(s)	476
BseDI	CCNNGG	2 cut(s)	75, 576
BseGI	GGATG	1 cut(s)	90
BseLI	CCNNNNNNNGG	1 cut(s)	539
BseMII	CTCAG	1 cut(s)	637
BseNI	ACTGG	1 cut(s)	409
BseRI	GAGGAG	2 cut(s)	92, 507
BseXI	GCAGC	1 cut(s)	110
BseYI	CCCAGC	2 cut(s)	39, 63
BshFI	GGCC	1 cut(s)	156
BshTI	ACCGGT	1 cut(s)	114
BshVI	ATCGAT	1 cut(s)	476
BsiHKAI	GWGCWC	1 cut(s)	624
BsiSI	CCGG	2 cut(s)	102, 115
BslI	CCNNNNNNNGG	1 cut(s)	539
BsnI	GGCC	1 cut(s)	156
Bsp1286I	GDGCHC	2 cut(s)	124, 624
Bsp143I	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
Bsp1720I	GCTNAGC	1 cut(s)	623
BspACI	CCGC	3 cut(s)	131, 588, 597
BspANI	GGCC	1 cut(s)	156
BspCNI	CTCAG	1 cut(s)	636
BspDI	ATCGAT	1 cut(s)	476
BspLI	GGNNCC	4 cut(s)	6, 123, 352, 400
BspPI	GGATC	4 cut(s)	345, 358, 420, 481
BsrFI	RCCGGY	1 cut(s)	114
BsrI	ACTGG	1 cut(s)	409
BssAI	RCCGGY	1 cut(s)	114
BssECI	CCNNGG	2 cut(s)	75, 576
BssMI	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
BssSI	CACGAG	1 cut(s)	282
Bst2BI	CACGAG	1 cut(s)	282
Bst2UI	CCWGG	1 cut(s)	506
Bst4CI	ACNGT	1 cut(s)	228
BstBAI	YACGTR	1 cut(s)	452
BstDEI	CTNAG	3 cut(s)	140, 623, 657
BstF5I	GGATG	1 cut(s)	90
BstKTI	GATC	9 cut(s)	210, 240, 340, 353, 388, 428, 436, 476, 480
BstMBI	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
BstMWI	GCNNNNNNNGC	2 cut(s)	594, 653
BstNI	CCWGG	1 cut(s)	506
BstSCI	CCNGG	2 cut(s)	101, 504
BstV1I	GCAGC	1 cut(s)	110
BstV2I	GAAGAC	2 cut(s)	247, 572
BstX2I	RGATCY	3 cut(s)	207, 350, 425
BstYI	RGATCY	3 cut(s)	207, 350, 425
Bsu15I	ATCGAT	1 cut(s)	476
BsuRI	GGCC	1 cut(s)	156
BsuTUI	ATCGAT	1 cut(s)	476
BtsCI	GGATG	1 cut(s)	90
BtsIMutI	CAGTG	1 cut(s)	402
Cfr10I	RCCGGY	1 cut(s)	114
Cfr13I	GGNCC	2 cut(s)	154, 378
ClaI	ATCGAT	1 cut(s)	476
Csp6I	GTAC	2 cut(s)	181, 417
CspAI	ACCGGT	1 cut(s)	114
CviAII	CATG	4 cut(s)	481, 535, 539, 562
CviQI	GTAC	2 cut(s)	181, 417
DdeI	CTNAG	3 cut(s)	140, 623, 657
DpnI	GATC	9 cut(s)	209, 239, 339, 352, 387, 427, 435, 475, 479
DpnII	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
DrdI	GACNNNNNNGTC	1 cut(s)	251
DseDI	GACNNNNNNGTC	1 cut(s)	251
Ecl136II	GAGCTC	1 cut(s)	622
Eco24I	GRGCYC	2 cut(s)	124, 624
Eco47I	GGWCC	1 cut(s)	378
Eco53kI	GAGCTC	1 cut(s)	622
Eco72I	CACGTG	1 cut(s)	452
EcoICRI	GAGCTC	1 cut(s)	622
EcoO109I	RGGNCCY	1 cut(s)	154
EcoRII	CCWGG	1 cut(s)	504
EcoT22I	ATGCAT	1 cut(s)	540
EcoT38I	GRGCYC	2 cut(s)	124, 624
FaeI	CATG	4 cut(s)	484, 538, 542, 565
FaiI	YATR	9 cut(s)	165, 231, 462, 482, 536, 540, 563, 594, 653
FalI	AAGNNNNNCTT	2 cut(s)	239, 271
FatI	CATG	4 cut(s)	480, 534, 538, 561
Fnu4HI	GCNGC	1 cut(s)	99
FokI	GGATG	1 cut(s)	77
FriOI	GRGCYC	2 cut(s)	124, 624
Fsp4HI	GCNGC	1 cut(s)	99
FspBI	CTAG	2 cut(s)	357, 414
GluI	GCNGC	1 cut(s)	99
GsaI	CCCAGC	2 cut(s)	43, 67
GsuI	CTGGAG	1 cut(s)	174
HaeIII	GGCC	1 cut(s)	156
HapII	CCGG	2 cut(s)	102, 115
Hin1II	CATG	4 cut(s)	484, 538, 542, 565
HinfI	GANTC	2 cut(s)	144, 199
HpaII	CCGG	2 cut(s)	102, 115
HphI	GGTGA	2 cut(s)	494, 554
Hpy188I	TCNGA	3 cut(s)	222, 312, 577
Hpy188III	TCNNGA	5 cut(s)	191, 203, 268, 284, 335
HpyAV	CCTTC	3 cut(s)	224, 295, 530
HpyCH4III	ACNGT	1 cut(s)	228
HpyCH4IV	ACGT	3 cut(s)	252, 315, 451
HpyCH4V	TGCA	3 cut(s)	19, 538, 647
HpyF10VI	GCNNNNNNNGC	2 cut(s)	594, 653
HpyF3I	CTNAG	3 cut(s)	140, 623, 657
HpySE526I	ACGT	3 cut(s)	252, 315, 451
Hsp92II	CATG	4 cut(s)	484, 538, 542, 565
Kzo9I	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
LmnI	GCTCC	1 cut(s)	127
LpnPI	CCDG	8 cut(s)	53, 77, 115, 128, 204, 390, 491, 518
Lsp1109I	GCAGC	1 cut(s)	110
LweI	GCATC	1 cut(s)	99
MaeI	CTAG	2 cut(s)	357, 414
MaeII	ACGT	3 cut(s)	252, 315, 451
MaeIII	GTNAC	3 cut(s)	30, 110, 447
MalI	GATC	9 cut(s)	209, 239, 339, 352, 387, 427, 435, 475, 479
MboI	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
MboII	GAAGA	2 cut(s)	247, 577
MflI	RGATCY	3 cut(s)	207, 350, 425
MhlI	GDGCHC	2 cut(s)	124, 624
MluCI	AATT	4 cut(s)	53, 305, 343, 439
Mph1103I	ATGCAT	1 cut(s)	540
MroXI	GAANNNNTTC	2 cut(s)	254, 519
MseI	TTAA	1 cut(s)	177
MspI	CCGG	2 cut(s)	102, 115
MspR9I	CCNGG	2 cut(s)	103, 506
MvaI	CCWGG	1 cut(s)	506
MwoI	GCNNNNNNNGC	2 cut(s)	594, 653
NciI	CCSGG	1 cut(s)	103
NdeII	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
NlaIII	CATG	4 cut(s)	484, 538, 542, 565
NlaIV	GGNNCC	4 cut(s)	6, 123, 352, 400
NmuCI	GTSAC	1 cut(s)	447
NsiI	ATGCAT	1 cut(s)	540
PdmI	GAANNNNTTC	2 cut(s)	254, 519
PfeI	GAWTC	2 cut(s)	144, 199
PinAI	ACCGGT	1 cut(s)	114
PkrI	GCNGC	1 cut(s)	100
PmaCI	CACGTG	1 cut(s)	452
PmlI	CACGTG	1 cut(s)	452
Ppu21I	YACGTR	1 cut(s)	452
Psp124BI	GAGCTC	1 cut(s)	624
Psp1406I	AACGTT	1 cut(s)	315
Psp6I	CCWGG	1 cut(s)	504
PspCI	CACGTG	1 cut(s)	452
PspFI	CCCAGC	2 cut(s)	39, 63
PspGI	CCWGG	1 cut(s)	504
PspN4I	GGNNCC	4 cut(s)	6, 123, 352, 400
PspPI	GGNCC	2 cut(s)	154, 378
PsuI	RGATCY	3 cut(s)	207, 350, 425
RsaI	GTAC	2 cut(s)	182, 418
RsaNI	GTAC	2 cut(s)	181, 417
SacI	GAGCTC	1 cut(s)	624
SaqAI	TTAA	1 cut(s)	177
SatI	GCNGC	1 cut(s)	99
Sau3AI	GATC	9 cut(s)	207, 237, 337, 350, 385, 425, 433, 473, 477
Sau96I	GGNCC	2 cut(s)	154, 378
ScaI	AGTACT	1 cut(s)	418
ScrFI	CCNGG	2 cut(s)	103, 506
SduI	GDGCHC	2 cut(s)	124, 624
SetI	ASST	8 cut(s)	255, 276, 318, 380, 454, 586, 624, 658
SfaNI	GCATC	1 cut(s)	99
SinI	GGWCC	1 cut(s)	378
SmlI	CTYRAG	3 cut(s)	149, 275, 617
SmoI	CTYRAG	3 cut(s)	149, 275, 617
SpeI	ACTAGT	2 cut(s)	356, 413
Sse9I	AATT	4 cut(s)	53, 305, 343, 439
SsiI	CCGC	3 cut(s)	131, 588, 597
SspMI	CTAG	2 cut(s)	357, 414
SstI	GAGCTC	1 cut(s)	624
StyD4I	CCNGG	2 cut(s)	101, 504
TaaI	ACNGT	1 cut(s)	228
TaiI	ACGT	3 cut(s)	255, 318, 454
TaqI	TCGA	3 cut(s)	240, 336, 476
TasI	AATT	4 cut(s)	53, 305, 343, 439
TatI	WGTACW	1 cut(s)	416
TfiI	GAWTC	2 cut(s)	144, 199
Tru1I	TTAA	1 cut(s)	177
Tru9I	TTAA	1 cut(s)	177
TscAI	CASTG	1 cut(s)	409
TseFI	GTSAC	1 cut(s)	447
TseI	GCWGC	1 cut(s)	98
Tsp45I	GTSAC	1 cut(s)	447
TspDTI	ATGAA	2 cut(s)	206, 578
TspGWI	ACGGA	1 cut(s)	654
TspRI	CASTG	1 cut(s)	409
VpaK11BI	GGWCC	1 cut(s)	378
XapI	RAATTY	2 cut(s)	305, 439
XmnI	GAANNNNTTC	2 cut(s)	254, 519
XspI	CTAG	2 cut(s)	357, 414
ZrmI	AGTACT	1 cut(s)	418
Zsp2I	ATGCAT	1 cut(s)	540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.