RchiOBHm_Chr7g0209401

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
26789058 .. 26789715
658 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18742

Sequence Viewer

Length: 123 bp
ATGTCGACCGAGATGGGTGGGTCAATGAATGGTGCCGTATTTGTGGATGCGGAAGAAGAGGAACTCGTGTTAGACGTCAGAGTGATCAGCGATGGTGGCCATTGGTTTAATTGGGTGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

40

Amino Acids

4.4

Weight (kDa)

4.05

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 78
AccB1I GGYRCC 1 cut(s) 32
AccI GTMKAC 1 cut(s) 5
AciI CCGC 1 cut(s) 50
AcoI YGGCCR 1 cut(s) 97
AcyI GRCGYC 1 cut(s) 75
AoxI GGCC 1 cut(s) 97
BalI TGGCCA 1 cut(s) 99
BanI GGYRCC 1 cut(s) 32
BauI CACGAG 1 cut(s) 65
BccI CCATC 2 cut(s) 7, 86
BceAI ACGGC 1 cut(s) 20
BclI TGATCA 1 cut(s) 84
BmiI GGNNCC 1 cut(s) 34
BmsI GCATC 1 cut(s) 37
BsaHI GRCGYC 1 cut(s) 75
BseGI GGATG 1 cut(s) 52
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 1 cut(s) 99
BshNI GGYRCC 1 cut(s) 32
BsiEI CGRYCG 1 cut(s) 9
BsnI GGCC 1 cut(s) 99
Bsp143I GATC 1 cut(s) 84
BspACI CCGC 1 cut(s) 50
BspANI GGCC 1 cut(s) 99
BspLI GGNNCC 1 cut(s) 34
BspT107I GGYRCC 1 cut(s) 32
BssMI GATC 1 cut(s) 84
BssNI GRCGYC 1 cut(s) 75
BssSI CACGAG 1 cut(s) 65
Bst2BI CACGAG 1 cut(s) 65
Bst6I CTCTTC 1 cut(s) 51
BstACI GRCGYC 1 cut(s) 75
BstF5I GGATG 1 cut(s) 52
BstKTI GATC 1 cut(s) 87
BstMBI GATC 1 cut(s) 84
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 1 cut(s) 96
BsuRI GGCC 1 cut(s) 99
BtgZI GCGATG 1 cut(s) 105
BtsCI GGATG 1 cut(s) 52
CviJI RGCY 1 cut(s) 99
CviKI_1 RGCY 1 cut(s) 99
DpnI GATC 1 cut(s) 86
DpnII GATC 1 cut(s) 84
EaeI YGGCCR 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 51
EarI CTCTTC 1 cut(s) 51
FbaI TGATCA 1 cut(s) 84
FblI GTMKAC 1 cut(s) 5
FokI GGATG 1 cut(s) 59
HaeIII GGCC 1 cut(s) 99
Hin1I GRCGYC 1 cut(s) 75
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 1 cut(s) 80
Hpy8I GTNNAC 1 cut(s) 6
HpyCH4IV ACGT 1 cut(s) 75
HpyF10VI GCNNNNNNNGC 1 cut(s) 96
HpySE526I ACGT 1 cut(s) 75
Hsp92I GRCGYC 1 cut(s) 75
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 1 cut(s) 84
LweI GCATC 1 cut(s) 37
MaeII ACGT 1 cut(s) 75
MalI GATC 1 cut(s) 86
MboI GATC 1 cut(s) 84
MboII GAAGA 2 cut(s) 65, 68
MlsI TGGCCA 1 cut(s) 99
MluCI AATT 1 cut(s) 109
MluNI TGGCCA 1 cut(s) 99
MnlI CCTC 1 cut(s) 52
Mox20I TGGCCA 1 cut(s) 99
MscI TGGCCA 1 cut(s) 99
MseI TTAA 1 cut(s) 108
Msp20I TGGCCA 1 cut(s) 99
MwoI GCNNNNNNNGC 1 cut(s) 96
NdeII GATC 1 cut(s) 84
NlaIV GGNNCC 1 cut(s) 34
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PspN4I GGNNCC 1 cut(s) 34
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 108
Sau3AI GATC 1 cut(s) 84
SetI ASST 1 cut(s) 78
SfaNI GCATC 1 cut(s) 37
SgeI CNNG 3 cut(s) 22, 77, 79
Sse9I AATT 1 cut(s) 109
SsiI CCGC 1 cut(s) 50
TaiI ACGT 1 cut(s) 78
TaqI TCGA 1 cut(s) 5
TaqII GACCGA 1 cut(s) 23
TasI AATT 1 cut(s) 109
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TspDTI ATGAA 1 cut(s) 41
XmiI GTMKAC 1 cut(s) 5
ZraI GACGTC 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.