Eps15 homology domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0169461 RchiOBHm_Chr7g0209401 |
| rosa_multiflora | Rmu_sc0000117.1_g000028 Rmu_sc0000813.1_g000013 |
| rosa_roxburghii | Rroxscaffold_2G00141080 Rroxscaffold_3G00274460 Rroxscaffold_5G00364860 |
| rosa_samantha | Rh1DG134900 Rh4AG185100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 366 |
| AciI | CCGC | 1 cut(s) | 32 |
| AcsI | RAATTY | 1 cut(s) | 138 |
| AgsI | TTSAA | 3 cut(s) | 144, 222, 293 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 373 |
| Alw26I | GTCTC | 1 cut(s) | 381 |
| Ama87I | CYCGRG | 1 cut(s) | 378 |
| ApoI | RAATTY | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 2 cut(s) | 290, 295 |
| AvaI | CYCGRG | 1 cut(s) | 378 |
| BauI | CACGAG | 1 cut(s) | 47 |
| BccI | CCATC | 2 cut(s) | 7, 242 |
| BceAI | ACGGC | 2 cut(s) | 91, 325 |
| BcoDI | GTCTC | 1 cut(s) | 381 |
| BfaI | CTAG | 1 cut(s) | 347 |
| BfmI | CTRYAG | 1 cut(s) | 363 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 373 |
| BmeT110I | CYCGRG | 1 cut(s) | 378 |
| BmsI | GCATC | 1 cut(s) | 19 |
| BsaBI | GATNNNNATC | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 1 cut(s) | 307 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 79, 109 |
| Bse3DI | GCAATG | 2 cut(s) | 160, 280 |
| Bse8I | GATNNNNATC | 1 cut(s) | 129 |
| BseDI | CCNNGG | 1 cut(s) | 307 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseJI | GATNNNNATC | 1 cut(s) | 129 |
| BseMI | GCAATG | 2 cut(s) | 160, 280 |
| BsiHKCI | CYCGRG | 1 cut(s) | 378 |
| BslFI | GGGAC | 1 cut(s) | 318 |
| BsmAI | GTCTC | 1 cut(s) | 381 |
| BsmBI | CGTCTC | 1 cut(s) | 381 |
| BsmFI | GGGAC | 1 cut(s) | 318 |
| BsoBI | CYCGRG | 1 cut(s) | 378 |
| Bsp143I | GATC | 3 cut(s) | 66, 157, 211 |
| BspACI | CCGC | 1 cut(s) | 32 |
| BsrDI | GCAATG | 2 cut(s) | 160, 280 |
| BssECI | CCNNGG | 1 cut(s) | 307 |
| BssMI | GATC | 3 cut(s) | 66, 157, 211 |
| BssSI | CACGAG | 1 cut(s) | 47 |
| Bst2BI | CACGAG | 1 cut(s) | 47 |
| Bst4CI | ACNGT | 1 cut(s) | 226 |
| Bst6I | CTCTTC | 1 cut(s) | 33 |
| BstDSI | CCRYGG | 1 cut(s) | 307 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstKTI | GATC | 3 cut(s) | 69, 160, 214 |
| BstMAI | GTCTC | 1 cut(s) | 381 |
| BstMBI | GATC | 3 cut(s) | 66, 157, 211 |
| BstNSI | RCATGY | 1 cut(s) | 326 |
| BstSFI | CTRYAG | 1 cut(s) | 363 |
| BtgI | CCRYGG | 1 cut(s) | 307 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| CviAII | CATG | 2 cut(s) | 323, 395 |
| CviJI | RGCY | 2 cut(s) | 203, 372 |
| CviKI_1 | RGCY | 2 cut(s) | 203, 372 |
| DpnI | GATC | 3 cut(s) | 68, 159, 213 |
| DpnII | GATC | 3 cut(s) | 66, 157, 211 |
| DriI | GACNNNNNGTC | 1 cut(s) | 373 |
| Eam1104I | CTCTTC | 1 cut(s) | 33 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 373 |
| EarI | CTCTTC | 1 cut(s) | 33 |
| Eco32I | GATATC | 1 cut(s) | 112 |
| Eco88I | CYCGRG | 1 cut(s) | 378 |
| EcoRV | GATATC | 1 cut(s) | 112 |
| Esp3I | CGTCTC | 1 cut(s) | 381 |
| FaeI | CATG | 2 cut(s) | 326, 398 |
| FaiI | YATR | 3 cut(s) | 164, 324, 396 |
| FaqI | GGGAC | 1 cut(s) | 318 |
| FatI | CATG | 2 cut(s) | 322, 394 |
| FblI | GTMKAC | 1 cut(s) | 366 |
| FokI | GGATG | 1 cut(s) | 41 |
| FspBI | CTAG | 1 cut(s) | 347 |
| Hin1II | CATG | 2 cut(s) | 326, 398 |
| HinfI | GANTC | 3 cut(s) | 170, 230, 293 |
| HphI | GGTGA | 2 cut(s) | 290, 295 |
| Hpy166II | GTNNAC | 2 cut(s) | 190, 367 |
| Hpy188I | TCNGA | 1 cut(s) | 10 |
| Hpy188III | TCNNGA | 4 cut(s) | 144, 258, 378, 380 |
| Hpy8I | GTNNAC | 2 cut(s) | 190, 367 |
| Hpy99I | CGWCG | 1 cut(s) | 77 |
| HpyAV | CCTTC | 1 cut(s) | 348 |
| HpyCH4III | ACNGT | 1 cut(s) | 226 |
| HpyCH4IV | ACGT | 1 cut(s) | 404 |
| HpyCH4V | TGCA | 1 cut(s) | 326 |
| HpySE526I | ACGT | 1 cut(s) | 404 |
| Hsp92II | CATG | 2 cut(s) | 326, 398 |
| Kzo9I | GATC | 3 cut(s) | 66, 157, 211 |
| LpnPI | CCDG | 1 cut(s) | 222 |
| LweI | GCATC | 1 cut(s) | 19 |
| MaeI | CTAG | 1 cut(s) | 347 |
| MaeII | ACGT | 1 cut(s) | 404 |
| MalI | GATC | 3 cut(s) | 68, 159, 213 |
| MboI | GATC | 3 cut(s) | 66, 157, 211 |
| MboII | GAAGA | 4 cut(s) | 47, 50, 134, 326 |
| MluCI | AATT | 5 cut(s) | 115, 138, 165, 261, 288 |
| MmeI | TCCRAC | 2 cut(s) | 40, 331 |
| MnlI | CCTC | 2 cut(s) | 34, 184 |
| MseI | TTAA | 1 cut(s) | 135 |
| NdeII | GATC | 3 cut(s) | 66, 157, 211 |
| NlaIII | CATG | 2 cut(s) | 326, 398 |
| NspI | RCATGY | 1 cut(s) | 326 |
| PaeR7I | CTCGAG | 1 cut(s) | 378 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PfeI | GAWTC | 3 cut(s) | 170, 230, 293 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| Sau3AI | GATC | 3 cut(s) | 66, 157, 211 |
| SetI | ASST | 1 cut(s) | 407 |
| SfaNI | GCATC | 1 cut(s) | 19 |
| SfcI | CTRYAG | 1 cut(s) | 363 |
| Sfr274I | CTCGAG | 1 cut(s) | 378 |
| SlaI | CTCGAG | 1 cut(s) | 378 |
| SmlI | CTYRAG | 1 cut(s) | 378 |
| SmoI | CTYRAG | 1 cut(s) | 378 |
| Sse9I | AATT | 5 cut(s) | 115, 138, 165, 261, 288 |
| SsiI | CCGC | 1 cut(s) | 32 |
| SspMI | CTAG | 1 cut(s) | 347 |
| TaaI | ACNGT | 1 cut(s) | 226 |
| TaiI | ACGT | 1 cut(s) | 407 |
| TaqI | TCGA | 1 cut(s) | 379 |
| TasI | AATT | 5 cut(s) | 115, 138, 165, 261, 288 |
| TfiI | GAWTC | 3 cut(s) | 170, 230, 293 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| TspDTI | ATGAA | 4 cut(s) | 222, 300, 333, 383 |
| XapI | RAATTY | 1 cut(s) | 138 |
| XceI | RCATGY | 1 cut(s) | 326 |
| XhoI | CTCGAG | 1 cut(s) | 378 |
| XmiI | GTMKAC | 1 cut(s) | 366 |
| XspI | CTAG | 1 cut(s) | 347 |