Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002175

Physical Location & Seq

Genomic Coordinates Forward (+)

29618791 .. 29626384

Gene Structure 7594 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18994

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2361 bp

ATGGGTCCACCGGTTATTGAACCAATTCCTCTGCCAATGTCTCGTATTGCTGGTGTCACAAGTTCCCCTACTCAAAGTCCAAGGGTATCAGGAAGCTCAGAATCTGTAGTGTCGGTCTTGCAAAACCCTGACTTTTCTTCAGCATCACCTTCAGCTTCTCCAGGTTCAGTTCATAACCCTCCAAGTGTTCCACCCAAACAAGTTGCCAGTGAAGTGAAGCGAGCTCCAGTGGTCACTTTCAGTACTGTTGATAGGCCTCAGAAGAAAGAGGCTGATGTAGAGAAACCAGTTTTTCCACCTTATGTTGCAGTTTCAAAGGACAAGAAGAAGAAAAAAAGTAGAGTTTGTTACCGGTGCCAAAAAGGAAAGTGGGAAACTAAGGAGTCGTGCCTGGTTTGTGATGCCAAGTATTGCAGCAATTGTGTGCTTCGGGCAATGGGTTCAATGCCTGAAGGGCGTAAGTGTGTGACATGCATTAGTCAGCCAATTGATGAATCAAAGCGGCTGAAATTGGGTAAACAGTCGAGGGTATTGTCCAGATTGCTCAGTCCCTTGGAAGTCAAGCAGATAATGAAAGCAGAGAAAGAATGTGCTGCCAATCAACTACGGCCAGAGCAACTGATAGTAAATGGATTTCCATTAAAACCAGAAGAGATGGCCGAATTACTTGGATGCGCTTTACCTCCGCGGAAGTTGAAGCCTGGTAGATATTGGTATGACAAGGAATCTGGTCTCTGGGGAAAGGAGGGAGAAAAACCAGATAGAATCATAAGTTCAAACTTAAATTTTACTGGGAAACTTAGCTCTGAAGCAAGCAACGGAAACACTGAAGTTTATATGAATGGTCGAGAAATTACAAAGCTTGAGTTGAAGGTGCTTAAGGTGGCAAGTGTGCAATGTCCACGTGACACCCATTTTTGGGTCTATGATGATGGCCGTTATGAGGAAGAAGGTCAGAACAATATCAGGGGAAACATTTGGGAGAAGGCTACAACTCGGTTTGTCTGTAGCCTGTTCTCTTTGCCCGTGCCACATGGTCAACCTCATGGACCAAGAGATGAGGCTAGCAATTATACCACCATTCCAAATTATTTGGAGCAGAAAAAAATTCAGAAGCTTCTTCTTCTTGGCCTTCCAGGGTCTGGAACAAGCACTATCTTCAAGCAGGCAAAATTCTTGTATGGGAACAAATTTACTGCAGAAGAGGTGCAGGATATGAAGTTGATGATCCAAAGTAACATGTACAAATATCTAAGCATTCTGCTAGATGGAAGGGAGCGCTTTGAAGAGGAGGCTTTATCTAGGATGGGCGCACATGGTTCCCATGATCAAAACAAAGCAACAGGTGGTCAGGTTGATAGTGATGAAACTAGTCAATGTATCTACTCCATCAACCCAAGGTTGAAGCATTTCTCTGATTGGCTTCTGGACATTATTGCTACTGGAGATTTAGATGCTTTTTTCCCTGCTGCAACACGCGAATATGCTCCATTAGTGGAAGAGGTGTGGAAGGATCCTGCTATTCAGGAGACATATAAAAGAAAAGATGAGCTTCATTTCCTCCCAGAGGTTGCCGAATACTTTTTAAGCCAGGCTGTTGAGGTATCTAGCAATGAGTATGAACCTTCAGAACGAGACATACTATATGCAGAAGGGGTCACTCAAGGAAATGGCTTGGCTTTCATAGAATTCTCTCTTGATGATCGAAGTCCAATGTCTGAAACCTATACAGAAAATCTGGAAGCTCCACCACCGCCGCTAACCAAATACCAACTTATAAGAGTTAATGCCAAGGGGATGAATGAAGGGTGTAAGTGGGTGGAAATGTTTGAAGACGTGCGTGTGGTGGTGTTTTGCGTCGCTCTTAGTGATTATGATCAGATATGGGTTTCCCCAGACAGTAGTGGGAGCGGATCATTGCTTCAAAATAAGATAATACAAAGCAGGGAGCTATTTGAGACTATGGTCAGACACCCTTGCTTTAAAGATACTCCTTTTGTTTTGGTACTAAACAAGTATGATCTCTTTGAGGACAAGGTTAATCAGGTGCCTTTAAGTACTTGTGAATGGTTCTATGATTTTAGTCCAGTGAAGCCTCACCACAGTAACCAGTCACTGGCCCATCAAGCTTACTTCTATGTTGCAATGAAGTTCAAAGACCTTTATACTTCTATCACGGATCGAAAGCTTTTCGTGTGGCAAGCTCGGGCAAGGGACCGTGTTACAGTTGATGAGGGATTCAAGTACATAAGAGAGGTTCTCAAGTGGGATGAGGAGAAGGAGGCGAACTACTATGGCGGACCGGAGGATTCATTTTATAGTACAGATATGAGCTCCTCGCCTTATGTCAGGCAGGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001664 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005102 GO:0005488 GO:0005515 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005834 GO:0005886 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009898 GO:0009987 GO:0010033 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0019897 GO:0019898 GO:0023052 GO:0031234 GO:0031683 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032991 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0044877 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0098796 GO:0098797 GO:1901265 GO:1901363 GO:1902494 GO:1905360 GO:2000026 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-alpha

Protein Analysis

786

Amino Acids

89.07

Weight (kDa)

6.01

Isoelectric Point (pI)

45.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-alpha	PF00503	367 - 753	2e-73	G-protein alpha subunit

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002175)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31930 AT1G31930 AT1G31930 AT1G31930 AT1G31930 AT1G31930
fragaria_vesca	FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320 FvH4_5g23320
malus_domestica	MD06G1025000.v1.1
prunus_persica	Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1 Prupe.5G026100_v2.0.a1
pyrus_communis	pycom06g02030
rosa_chinensis	RchiOBHm_Chr7g0212271
rosa_laevigata	RLG00000002900
rosa_multiflora	Rmu_sc0001911.1_g000047
rosa_roxburghii	Rroxscaffold_3G00246940
rosa_rugosa	Rorug07G0133000 Rorug07G0133100 Rorug07G0133200 Rorug07G0133200
rosa_samantha	Rh7AG265800 Rh7BG260000
rosa_wichuraiana	Rw7G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1778
AccB1I	GGYRCC	2 cut(s)	354, 2047
AccB7I	CCANNNNNTGG	2 cut(s)	1142, 2116
AccBSI	CCGCTC	1 cut(s)	1911
AccII	CGCG	2 cut(s)	688, 1479
AciI	CCGC	7 cut(s)	502, 686, 688, 1754, 1757, 1911, 2298
AclWI	GGATC	5 cut(s)	1222, 1508, 1521, 1921, 2187
AcoI	YGGCCR	3 cut(s)	608, 657, 934
AcsI	RAATTY	5 cut(s)	784, 1107, 1172, 1190, 1688
AcuI	CTGAAG	6 cut(s)	123, 135, 471, 828, 849, 1611
AcvI	CACGTG	1 cut(s)	905
AfaI	GTAC	6 cut(s)	244, 1244, 2007, 2059, 2246, 2323
AfeI	AGCGCT	1 cut(s)	1280
AfiI	CCNNNNNNNGG	6 cut(s)	918, 919, 943, 1142, 1567, 2116
AflII	CTTAAG	1 cut(s)	878
AflIII	ACRYGT	1 cut(s)	1239
AgeI	ACCGGT	2 cut(s)	10, 351
AhlI	ACTAGT	1 cut(s)	1370
AjiI	CACGTC	1 cut(s)	1837
AjnI	CCWGG	5 cut(s)	160, 390, 700, 1135, 1590
Alw21I	GWGCWC	2 cut(s)	226, 2336
Alw26I	GTCTC	5 cut(s)	45, 737, 1523, 1629, 1952
AlwI	GGATC	5 cut(s)	1222, 1508, 1521, 1921, 2187
AlwNI	CAGNNNCTG	3 cut(s)	104, 1142, 2116
Ama87I	CYCGRG	1 cut(s)	2205
Aor51HI	AGCGCT	1 cut(s)	1280
AoxI	GGCC	6 cut(s)	254, 608, 657, 934, 1129, 2118
ApeKI	GCWGC	3 cut(s)	414, 593, 1469
ApoI	RAATTY	5 cut(s)	784, 1107, 1172, 1190, 1688
AsiGI	ACCGGT	2 cut(s)	10, 351
Asp700I	GAANNNNTTC	2 cut(s)	24, 1409
AspLEI	GCGC	3 cut(s)	677, 1281, 1313
AspS9I	GGNCC	5 cut(s)	5, 1049, 2119, 2215, 2300
AsuHPI	GGTGA	2 cut(s)	138, 2090
AsuNHI	GCTAGC	1 cut(s)	1064
AvaI	CYCGRG	1 cut(s)	2205
AvaII	GGWCC	4 cut(s)	5, 1049, 2215, 2300
BamHI	GGATCC	1 cut(s)	1513
BanI	GGYRCC	2 cut(s)	354, 2047
BanII	GRGCYC	2 cut(s)	226, 2336
BbrPI	CACGTG	1 cut(s)	905
BbsI	GAAGAC	1 cut(s)	1839
Bbv12I	GWGCWC	2 cut(s)	226, 2336
BbvI	GCAGC	3 cut(s)	426, 580, 1456
BccI	CCATC	6 cut(s)	649, 926, 1262, 1300, 1397, 2130
BceAI	ACGGC	2 cut(s)	623, 921
BciT130I	CCWGG	5 cut(s)	162, 392, 702, 1137, 1592
BclI	TGATCA	2 cut(s)	1327, 1876
BcoDI	GTCTC	5 cut(s)	45, 737, 1523, 1629, 1952
BcuI	ACTAGT	1 cut(s)	1370
BfaI	CTAG	5 cut(s)	1065, 1265, 1302, 1371, 1608
BfmI	CTRYAG	3 cut(s)	105, 1006, 1197
BfoI	RGCGCY	1 cut(s)	1282
BfrI	CTTAAG	1 cut(s)	878
BglI	GCCNNNNNGGC	1 cut(s)	454
BisI	GCNGC	5 cut(s)	415, 503, 594, 1470, 1757
BlsI	GCNGC	5 cut(s)	416, 504, 595, 1471, 1758
BmcAI	AGTACT	2 cut(s)	244, 2059
Bme1390I	CCNGG	5 cut(s)	162, 392, 702, 1137, 1592
Bme18I	GGWCC	4 cut(s)	5, 1049, 2215, 2300
BmeT110I	CYCGRG	1 cut(s)	2205
BmgBI	CACGTC	1 cut(s)	1837
BmgT120I	GGNCC	5 cut(s)	5, 1049, 2119, 2215, 2300
BmiI	GGNNCC	6 cut(s)	6, 356, 1321, 1515, 2049, 2216
BmrFI	CCNGG	5 cut(s)	162, 392, 702, 1137, 1592
BmrI	ACTGGG	1 cut(s)	801
BmsI	GCATC	4 cut(s)	152, 391, 662, 1444
BmtI	GCTAGC	1 cut(s)	1068
BmuI	ACTGGG	1 cut(s)	801
BoxI	GACNNNNGTC	1 cut(s)	1964
BpiI	GAAGAC	1 cut(s)	1839
BplI	GAGNNNNNCTC	2 cut(s)	2244, 2276
BpmI	CTGGAG	3 cut(s)	144, 210, 1464
BpuEI	CTTGAG	3 cut(s)	884, 1647, 2246
BsaAI	YACGTR	1 cut(s)	905
BsaBI	GATNNNNATC	1 cut(s)	1875
BsaI	GGTCTC	1 cut(s)	737
BsaJI	CCNNGG	6 cut(s)	80, 552, 686, 1136, 1397, 1791
BsaWI	WCCGGW	3 cut(s)	10, 351, 2302
Bsc4I	CCNNNNNNNGG	6 cut(s)	918, 919, 943, 1142, 1567, 2116
Bse118I	RCCGGY	2 cut(s)	10, 351
Bse1I	ACTGG	8 cut(s)	207, 227, 287, 796, 1447, 2087, 2110, 2121
Bse3DI	GCAATG	5 cut(s)	441, 902, 1618, 1916, 2151
Bse8I	GATNNNNATC	1 cut(s)	1875
BseBI	CCWGG	5 cut(s)	162, 392, 702, 1137, 1592
BseDI	CCNNGG	6 cut(s)	80, 552, 686, 1136, 1397, 1791
BseGI	GGATG	4 cut(s)	677, 1311, 1803, 2275
BseJI	GATNNNNATC	1 cut(s)	1875
BseLI	CCNNNNNNNGG	6 cut(s)	918, 919, 943, 1142, 1567, 2116
BseMI	GCAATG	5 cut(s)	441, 902, 1618, 1916, 2151
BseMII	CTCAG	3 cut(s)	111, 272, 559
BseNI	ACTGG	8 cut(s)	207, 227, 287, 796, 1447, 2087, 2110, 2121
BseRI	GAGGAG	3 cut(s)	1304, 2288, 2326
BseXI	GCAGC	3 cut(s)	426, 580, 1456
BsgI	GTGCAG	1 cut(s)	1229
Bsh1236I	CGCG	2 cut(s)	688, 1479
BshFI	GGCC	6 cut(s)	256, 610, 659, 936, 1131, 2120
BshNI	GGYRCC	2 cut(s)	354, 2047
BshTI	ACCGGT	2 cut(s)	10, 351
BsiHKAI	GWGCWC	2 cut(s)	226, 2336
BsiHKCI	CYCGRG	1 cut(s)	2205
BsiSI	CCGG	3 cut(s)	11, 352, 2303
BslFI	GGGAC	2 cut(s)	534, 2228
BslI	CCNNNNNNNGG	6 cut(s)	918, 919, 943, 1142, 1567, 2116
BsmAI	GTCTC	5 cut(s)	45, 737, 1523, 1629, 1952
BsmFI	GGGAC	2 cut(s)	534, 2228
BsmI	GAATGC	1 cut(s)	1257
BsnI	GGCC	6 cut(s)	256, 610, 659, 936, 1131, 2120
Bso31I	GGTCTC	1 cut(s)	737
BsoBI	CYCGRG	1 cut(s)	2205
Bsp1286I	GDGCHC	2 cut(s)	226, 2336
Bsp1407I	TGTACA	1 cut(s)	1242
Bsp143I	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
BspACI	CCGC	7 cut(s)	502, 686, 688, 1754, 1757, 1911, 2298
BspANI	GGCC	6 cut(s)	256, 610, 659, 936, 1131, 2120
BspCNI	CTCAG	3 cut(s)	110, 271, 558
BspFNI	CGCG	2 cut(s)	688, 1479
BspLI	GGNNCC	6 cut(s)	6, 356, 1321, 1515, 2049, 2216
BspMAI	CTGCAG	1 cut(s)	1201
BspOI	GCTAGC	1 cut(s)	1068
BspPI	GGATC	5 cut(s)	1222, 1508, 1521, 1921, 2187
BspT107I	GGYRCC	2 cut(s)	354, 2047
BspTI	CTTAAG	1 cut(s)	878
BspTNI	GGTCTC	1 cut(s)	737
BsrBI	CCGCTC	1 cut(s)	1911
BsrDI	GCAATG	5 cut(s)	441, 902, 1618, 1916, 2151
BsrFI	RCCGGY	2 cut(s)	10, 351
BsrGI	TGTACA	1 cut(s)	1242
BsrI	ACTGG	8 cut(s)	207, 227, 287, 796, 1447, 2087, 2110, 2121
BssAI	RCCGGY	2 cut(s)	10, 351
BssECI	CCNNGG	6 cut(s)	80, 552, 686, 1136, 1397, 1791
BssMI	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
BssT1I	CCWWGG	4 cut(s)	80, 552, 1397, 1791
Bst2UI	CCWGG	5 cut(s)	162, 392, 702, 1137, 1592
Bst4CI	ACNGT	6 cut(s)	247, 522, 1901, 2105, 2219, 2227
Bst6I	CTCTTC	4 cut(s)	645, 1197, 1281, 1494
BstAFI	CTTAAG	1 cut(s)	878
BstAUI	TGTACA	1 cut(s)	1242
BstBAI	YACGTR	1 cut(s)	905
BstC8I	GCNNGC	5 cut(s)	222, 814, 1066, 1167, 2202
BstDEI	CTNAG	7 cut(s)	97, 258, 378, 545, 800, 1253, 1865
BstDSI	CCRYGG	1 cut(s)	686
BstENI	CCTNNNNNAGG	1 cut(s)	1565
BstF5I	GGATG	4 cut(s)	677, 1311, 1803, 2275
BstFNI	CGCG	2 cut(s)	688, 1479
BstH2I	RGCGCY	1 cut(s)	1282
BstHHI	GCGC	3 cut(s)	677, 1281, 1313
BstKTI	GATC	8 cut(s)	1230, 1330, 1516, 1705, 1879, 1916, 2023, 2182
BstMAI	GTCTC	5 cut(s)	45, 737, 1523, 1629, 1952
BstMBI	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
BstMWI	GCNNNNNNNGC	2 cut(s)	454, 2126
BstNI	CCWGG	5 cut(s)	162, 392, 702, 1137, 1592
BstNSI	RCATGY	2 cut(s)	474, 1243
BstPAI	GACNNNNGTC	1 cut(s)	1964
BstSCI	CCNGG	5 cut(s)	160, 390, 700, 1135, 1590
BstSFI	CTRYAG	3 cut(s)	105, 1006, 1197
BstUI	CGCG	2 cut(s)	688, 1479
BstV1I	GCAGC	3 cut(s)	426, 580, 1456
BstV2I	GAAGAC	1 cut(s)	1839
BstX2I	RGATCY	1 cut(s)	1513
BstYI	RGATCY	1 cut(s)	1513
BsuRI	GGCC	6 cut(s)	256, 610, 659, 936, 1131, 2120
BtgI	CCRYGG	1 cut(s)	686
BtrI	CACGTC	1 cut(s)	1837
BtsCI	GGATG	4 cut(s)	677, 1311, 1803, 2275
BtsIMutI	CAGTG	5 cut(s)	214, 234, 825, 2094, 2114
Cac8I	GCNNGC	5 cut(s)	222, 814, 1066, 1167, 2202
CaiI	CAGNNNCTG	3 cut(s)	104, 1142, 2116
CfoI	GCGC	3 cut(s)	677, 1281, 1313
Cfr10I	RCCGGY	2 cut(s)	10, 351
Cfr13I	GGNCC	5 cut(s)	5, 1049, 2119, 2215, 2300
Cfr42I	CCGCGG	1 cut(s)	689
CpoI	CGGWCCG	1 cut(s)	2300
CseI	GACGC	1 cut(s)	1846
Csp6I	GTAC	6 cut(s)	243, 1243, 2006, 2058, 2245, 2322
CspAI	ACCGGT	2 cut(s)	10, 351
CspI	CGGWCCG	1 cut(s)	2300
CviAII	CATG	6 cut(s)	471, 1034, 1046, 1240, 1316, 1325
CviQI	GTAC	6 cut(s)	243, 1243, 2006, 2058, 2245, 2322
DdeI	CTNAG	7 cut(s)	97, 258, 378, 545, 800, 1253, 1865
DpnI	GATC	8 cut(s)	1229, 1329, 1515, 1704, 1878, 1915, 2022, 2181
DpnII	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
DraI	TTTAAA	1 cut(s)	1984
EaeI	YGGCCR	3 cut(s)	608, 657, 934
Eam1104I	CTCTTC	4 cut(s)	645, 1197, 1281, 1494
EarI	CTCTTC	4 cut(s)	645, 1197, 1281, 1494
EciI	GGCGGA	1 cut(s)	2313
Ecl136II	GAGCTC	2 cut(s)	224, 2334
Eco130I	CCWWGG	4 cut(s)	80, 552, 1397, 1791
Eco147I	AGGCCT	1 cut(s)	256
Eco24I	GRGCYC	2 cut(s)	226, 2336
Eco31I	GGTCTC	1 cut(s)	737
Eco47I	GGWCC	4 cut(s)	5, 1049, 2215, 2300
Eco47III	AGCGCT	1 cut(s)	1280
Eco53kI	GAGCTC	2 cut(s)	224, 2334
Eco57I	CTGAAG	6 cut(s)	123, 135, 471, 828, 849, 1611
Eco72I	CACGTG	1 cut(s)	905
Eco88I	CYCGRG	1 cut(s)	2205
EcoICRI	GAGCTC	2 cut(s)	224, 2334
EcoNI	CCTNNNNNAGG	1 cut(s)	1565
EcoRI	GAATTC	1 cut(s)	1688
EcoRII	CCWGG	5 cut(s)	160, 390, 700, 1135, 1590
EcoT14I	CCWWGG	4 cut(s)	80, 552, 1397, 1791
EcoT22I	ATGCAT	1 cut(s)	476
EcoT38I	GRGCYC	2 cut(s)	226, 2336
ErhI	CCWWGG	4 cut(s)	80, 552, 1397, 1791
FaeI	CATG	6 cut(s)	474, 1037, 1049, 1243, 1319, 1328
FalI	AAGNNNNNCTT	2 cut(s)	1536, 1568
FaqI	GGGAC	2 cut(s)	534, 2228
FatI	CATG	6 cut(s)	470, 1033, 1045, 1239, 1315, 1324
FbaI	TGATCA	2 cut(s)	1327, 1876
Fnu4HI	GCNGC	5 cut(s)	415, 503, 594, 1470, 1757
FokI	GGATG	4 cut(s)	684, 1318, 1810, 2282
FriOI	GRGCYC	2 cut(s)	226, 2336
Fsp4HI	GCNGC	5 cut(s)	415, 503, 594, 1470, 1757
FspBI	CTAG	5 cut(s)	1065, 1265, 1302, 1371, 1608
GlaI	GCGC	3 cut(s)	676, 1280, 1312
GluI	GCNGC	5 cut(s)	415, 503, 594, 1470, 1757
GsuI	CTGGAG	3 cut(s)	144, 210, 1464
HaeII	RGCGCY	1 cut(s)	1282
HaeIII	GGCC	6 cut(s)	256, 610, 659, 936, 1131, 2120
HapII	CCGG	3 cut(s)	11, 352, 2303
HgaI	GACGC	1 cut(s)	1846
HhaI	GCGC	3 cut(s)	677, 1281, 1313
Hin1II	CATG	6 cut(s)	474, 1037, 1049, 1243, 1319, 1328
Hin6I	GCGC	3 cut(s)	675, 1279, 1311
HinP1I	GCGC	3 cut(s)	675, 1279, 1311
HincII	GTYRAC	1 cut(s)	1040
HindII	GTYRAC	1 cut(s)	1040
HindIII	AAGCTT	4 cut(s)	860, 1115, 2127, 2186
HinfI	GANTC	7 cut(s)	101, 383, 494, 725, 765, 2238, 2309
HpaII	CCGG	3 cut(s)	11, 352, 2303
HphI	GGTGA	2 cut(s)	138, 2090
Hpy166II	GTNNAC	4 cut(s)	8, 518, 902, 1040
Hpy188III	TCNNGA	8 cut(s)	90, 537, 848, 1143, 1427, 1526, 1697, 1739
Hpy8I	GTNNAC	4 cut(s)	8, 518, 902, 1040
Hpy99I	CGWCG	1 cut(s)	1862
HpyCH4III	ACNGT	6 cut(s)	247, 522, 1901, 2105, 2219, 2227
HpyCH4IV	ACGT	2 cut(s)	904, 1836
HpyF10VI	GCNNNNNNNGC	2 cut(s)	454, 2126
HpyF3I	CTNAG	7 cut(s)	97, 258, 378, 545, 800, 1253, 1865
HpySE526I	ACGT	2 cut(s)	904, 1836
Hsp92II	CATG	6 cut(s)	474, 1037, 1049, 1243, 1319, 1328
HspAI	GCGC	3 cut(s)	675, 1279, 1311
Ksp22I	TGATCA	2 cut(s)	1327, 1876
KspI	CCGCGG	1 cut(s)	689
Kzo9I	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
LmnI	GCTCC	8 cut(s)	229, 1096, 1276, 1492, 1750, 1908, 1948, 2339
Lsp1109I	GCAGC	3 cut(s)	426, 580, 1456
LweI	GCATC	4 cut(s)	152, 391, 662, 1444
MaeI	CTAG	5 cut(s)	1065, 1265, 1302, 1371, 1608
MaeII	ACGT	2 cut(s)	904, 1836
MalI	GATC	8 cut(s)	1229, 1329, 1515, 1704, 1878, 1915, 2022, 2181
MbiI	CCGCTC	1 cut(s)	1911
MboI	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
MfeI	CAATTG	2 cut(s)	418, 486
MflI	RGATCY	1 cut(s)	1513
MhlI	GDGCHC	2 cut(s)	226, 2336
MlyI	GAGTC	1 cut(s)	392
Mph1103I	ATGCAT	1 cut(s)	476
MroXI	GAANNNNTTC	2 cut(s)	24, 1409
MseI	TTAA	8 cut(s)	641, 782, 879, 1586, 1785, 1983, 2040, 2054
MspA1I	CMGCKG	1 cut(s)	688
MspCI	CTTAAG	1 cut(s)	878
MspI	CCGG	3 cut(s)	11, 352, 2303
MspR9I	CCNGG	5 cut(s)	162, 392, 702, 1137, 1592
MunI	CAATTG	2 cut(s)	418, 486
Mva1269I	GAATGC	1 cut(s)	1257
MvaI	CCWGG	5 cut(s)	162, 392, 702, 1137, 1592
MvnI	CGCG	2 cut(s)	688, 1479
MwoI	GCNNNNNNNGC	2 cut(s)	454, 2126
NdeII	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
NheI	GCTAGC	1 cut(s)	1064
NlaIII	CATG	6 cut(s)	474, 1037, 1049, 1243, 1319, 1328
NlaIV	GGNNCC	6 cut(s)	6, 356, 1321, 1515, 2049, 2216
NmuCI	GTSAC	6 cut(s)	55, 232, 466, 905, 1657, 2112
NsiI	ATGCAT	1 cut(s)	476
NspI	RCATGY	2 cut(s)	474, 1243
PceI	AGGCCT	1 cut(s)	256
PciI	ACATGT	1 cut(s)	1239
PctI	GAATGC	1 cut(s)	1257
PdmI	GAANNNNTTC	2 cut(s)	24, 1409
PfeI	GAWTC	6 cut(s)	101, 494, 725, 765, 2238, 2309
PflMI	CCANNNNNTGG	2 cut(s)	1142, 2116
PinAI	ACCGGT	2 cut(s)	10, 351
PkrI	GCNGC	5 cut(s)	416, 504, 595, 1471, 1758
PleI	GAGTC	1 cut(s)	391
PmaCI	CACGTG	1 cut(s)	905
PmlI	CACGTG	1 cut(s)	905
PpsI	GAGTC	1 cut(s)	391
Ppu21I	YACGTR	1 cut(s)	905
PscI	ACATGT	1 cut(s)	1239
PshAI	GACNNNNGTC	1 cut(s)	1964
PsiI	TTATAA	1 cut(s)	1778
Psp124BI	GAGCTC	2 cut(s)	226, 2336
Psp6I	CCWGG	5 cut(s)	160, 390, 700, 1135, 1590
PspCI	CACGTG	1 cut(s)	905
PspGI	CCWGG	5 cut(s)	160, 390, 700, 1135, 1590
PspN4I	GGNNCC	6 cut(s)	6, 356, 1321, 1515, 2049, 2216
PspPI	GGNCC	5 cut(s)	5, 1049, 2119, 2215, 2300
PsrI	GAACNNNNNNTAC	2 cut(s)	1623, 1655
PstI	CTGCAG	1 cut(s)	1201
PstNI	CAGNNNCTG	3 cut(s)	104, 1142, 2116
PsuI	RGATCY	1 cut(s)	1513
RsaI	GTAC	6 cut(s)	244, 1244, 2007, 2059, 2246, 2323
RsaNI	GTAC	6 cut(s)	243, 1243, 2006, 2058, 2245, 2322
Rsr2I	CGGWCCG	1 cut(s)	2300
RsrII	CGGWCCG	1 cut(s)	2300
SacI	GAGCTC	2 cut(s)	226, 2336
SacII	CCGCGG	1 cut(s)	689
SaqAI	TTAA	8 cut(s)	641, 782, 879, 1586, 1785, 1983, 2040, 2054
SatI	GCNGC	5 cut(s)	415, 503, 594, 1470, 1757
Sau3AI	GATC	8 cut(s)	1227, 1327, 1513, 1702, 1876, 1913, 2020, 2179
Sau96I	GGNCC	5 cut(s)	5, 1049, 2119, 2215, 2300
ScaI	AGTACT	2 cut(s)	244, 2059
SchI	GAGTC	1 cut(s)	392
ScrFI	CCNGG	5 cut(s)	162, 392, 702, 1137, 1592
SduI	GDGCHC	2 cut(s)	226, 2336
SfaNI	GCATC	4 cut(s)	152, 391, 662, 1444
SfcI	CTRYAG	3 cut(s)	105, 1006, 1197
Sfr303I	CCGCGG	1 cut(s)	689
SgrBI	CCGCGG	1 cut(s)	689
SinI	GGWCC	4 cut(s)	5, 1049, 2215, 2300
SmlI	CTYRAG	4 cut(s)	863, 878, 1662, 2261
SmoI	CTYRAG	4 cut(s)	863, 878, 1662, 2261
SpeI	ACTAGT	1 cut(s)	1370
SseBI	AGGCCT	1 cut(s)	256
SsiI	CCGC	7 cut(s)	502, 686, 688, 1754, 1757, 1911, 2298
SspMI	CTAG	5 cut(s)	1065, 1265, 1302, 1371, 1608
SstI	GAGCTC	2 cut(s)	226, 2336
StuI	AGGCCT	1 cut(s)	256
StyD4I	CCNGG	5 cut(s)	160, 390, 700, 1135, 1590
StyI	CCWWGG	4 cut(s)	80, 552, 1397, 1791
TaaI	ACNGT	6 cut(s)	247, 522, 1901, 2105, 2219, 2227
TaiI	ACGT	2 cut(s)	907, 1839
TaqI	TCGA	4 cut(s)	524, 847, 1705, 2182
TaqII	GACCGA	1 cut(s)	103
TatI	WGTACW	5 cut(s)	242, 1242, 2057, 2244, 2321
TauI	GCSGC	2 cut(s)	505, 1759
TfiI	GAWTC	6 cut(s)	101, 494, 725, 765, 2238, 2309
Tru1I	TTAA	8 cut(s)	641, 782, 879, 1586, 1785, 1983, 2040, 2054
Tru9I	TTAA	8 cut(s)	641, 782, 879, 1586, 1785, 1983, 2040, 2054
TscAI	CASTG	5 cut(s)	214, 234, 832, 2094, 2121
TseFI	GTSAC	6 cut(s)	55, 232, 466, 905, 1657, 2112
TseI	GCWGC	3 cut(s)	414, 593, 1469
Tsp45I	GTSAC	6 cut(s)	55, 232, 466, 905, 1657, 2112
TspGWI	ACGGA	2 cut(s)	834, 2192
TspRI	CASTG	5 cut(s)	214, 234, 832, 2094, 2121
Van91I	CCANNNNNTGG	2 cut(s)	1142, 2116
Vha464I	CTTAAG	1 cut(s)	878
VpaK11BI	GGWCC	4 cut(s)	5, 1049, 2215, 2300
XagI	CCTNNNNNAGG	1 cut(s)	1565
XapI	RAATTY	5 cut(s)	784, 1107, 1172, 1190, 1688
XceI	RCATGY	2 cut(s)	474, 1243
XmnI	GAANNNNTTC	2 cut(s)	24, 1409
XspI	CTAG	5 cut(s)	1065, 1265, 1302, 1371, 1608
ZrmI	AGTACT	2 cut(s)	244, 2059
Zsp2I	ATGCAT	1 cut(s)	476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.