Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007947

Physical Location & Seq

Genomic Coordinates Forward (+)

67684009 .. 67685503

Gene Structure 1495 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ21650

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGGCGGGAGGCAAAGTGAGGAAAGAGAAGGCGAAGGCGGGAGGCGCGCAGACGCCGTATCAAGGAGGCATCTCCTTCCACAAGTCCAAAGGCCAGCACATCCTCAAGAACCCTCTTCTCGTCGACTCCATAGTCCAGAAGTCCGGCATCAAATCCACCGACGTCATCCTCGAGATCGGTCCCGGTACCGGTAATCTCACCAAGAAGCTTCTGGAAGCCGGCAAGAAGGTCATCGCCGTTGAGATTGACGCTCGTATGGTCCTCGAGCTTCAGCGACGATTCCAGGGCACTCCTCTCTCCAACCGCTTACAGATTATTCAAGGAGATGTGCTCAAGACTGAGCTTCCCTATTTCGATATATGCGTGGCCAACATCCCTTATCAAATCTCCTCACCCCTCACCTTCAAGTTACTGCATCACAAACCTGCTTTCAGATGTGCTATTATAATGTTCCAAAAGGAATTTGCAATGAGGTTGATTGCGCAGCCAGGGGACAAGCTCTACTGTCGTCTTACGGTTAACACCCAGCGCCTGGCTCAGGTCTCTCATCTTCTCAAAGTTGGAAGGAACAATTTCCGCCCTCCGCCAAAGGTTGACTCCTCTGTAGTTCGAATTGAGCCCAGGAAACAATTTGAAGTGAACGAGAAGGAGTGGGATGGCTTCTTGCGGATTTGTTTCAATAGGAAGAACAAAACGCTTGGTTCGATTTTTAGGCAGAAAAAGGTTCTCAGTTTGCTCGAGAAGAATTATAAGACCCTGCAGGCACTTAATCTCAATCCTGCTCAACAGGGTGCCGTGGAGGAGACCAATGAAGTGATGGATTTTGAGGATATGGAGATGGATGATGACGAAGCTGATGATGAAATGGAGGTGGAGGACGGTAATGCAGAAGGAGAGACATCTGAATTCAAAGAAAAGGTTTTGAGGGTCTTGAAGGATAATGATTTTGAAAATGAGAGGTCTTCAAAGCTTAAATTACGTGAGTTTGTAACCCTACTTTCTGAATTCTGCAAGGCTGGTATTCACTTCTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000179 GO:0001510 GO:0001708 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008173 GO:0008649 GO:0008757 GO:0009451 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0016433 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0022613 GO:0030154 GO:0031167 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032259 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045165 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051301 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:0140098 GO:0140102 GO:1901360 GO:2000232 GO:2000234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RrnaAD

Protein Analysis

344

Amino Acids

39.01

Weight (kDa)

8.89

Isoelectric Point (pI)

27.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RrnaAD	PF00398	25 - 274	4e-67	Ribosomal RNA adenine dimethylase
Methyltransf_25	PF13649	56 - 124	7.4e-09	Methyltransferase domain
Methyltransf_11	PF08241	57 - 124	5.7e-07	Methyltransferase domain
Methyltransf_12	PF08242	57 - 124	7.6e-07	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47420
fragaria_vesca	FvH4_5g39320 FvH4_5g39320 FvH4_5g39320 FvH4_5g39320 FvH4_5g39320
malus_domestica	MD01G1012800.v1.1 MD11G1314900.v1.1
prunus_persica	Prupe.1G563800_v2.0.a1 Prupe.8G271700_v2.0.a1
pyrus_communis	pycom01g04480 pycom03g23390 pycom11g27510
rosa_chinensis	RchiOBHm_Chr7g0241601
rosa_laevigata	RLG00000000562
rosa_multiflora	Rmu_sc0002268.1_g000014 Rmu_sc0014556.1_g000002
rosa_roxburghii	Rroxscaffold_3G00218890
rosa_rugosa	Rorug07G0345600
rosa_samantha	Rh7AG500000 Rh7BG471100 Rh7CG516400 Rh7DG485000
rosa_wichuraiana	Rw7G042230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	446, 750
AasI	GACNNNNNNGTC	1 cut(s)	131
AatII	GACGTC	1 cut(s)	165
Acc16I	TGCGCA	1 cut(s)	483
Acc36I	ACCTGC	1 cut(s)	433
Acc65I	GGTACC	1 cut(s)	185
AccB1I	GGYRCC	2 cut(s)	185, 791
AccB7I	CCANNNNNTGG	1 cut(s)	532
AccI	GTMKAC	1 cut(s)	123
AccII	CGCG	1 cut(s)	47
AciI	CCGC	6 cut(s)	5, 38, 304, 577, 584, 667
AcoI	YGGCCR	1 cut(s)	366
AcsI	RAATTY	3 cut(s)	461, 905, 1004
AcuI	CTGAAG	1 cut(s)	254
AcyI	GRCGYC	2 cut(s)	53, 162
AfaI	GTAC	1 cut(s)	187
AfiI	CCNNNNNNNGG	4 cut(s)	62, 188, 532, 538
AgeI	ACCGGT	1 cut(s)	188
AgsI	TTSAA	8 cut(s)	320, 406, 635, 679, 910, 934, 950, 966
AjnI	CCWGG	4 cut(s)	282, 487, 531, 620
AluBI	AGCT	6 cut(s)	208, 268, 343, 499, 854, 970
AluI	AGCT	6 cut(s)	208, 268, 343, 499, 854, 970
Alw21I	GWGCWC	1 cut(s)	333
Alw26I	GTCTC	3 cut(s)	547, 797, 890
AlwNI	CAGNNNCTG	1 cut(s)	532
Ama87I	CYCGRG	3 cut(s)	170, 263, 737
AoxI	GGCC	2 cut(s)	91, 366
ApeKI	GCWGC	1 cut(s)	484
ApoI	RAATTY	3 cut(s)	461, 905, 1004
AsiGI	ACCGGT	1 cut(s)	188
Asp700I	GAANNNNTTC	1 cut(s)	572
Asp718I	GGTACC	1 cut(s)	185
AspLEI	GCGC	4 cut(s)	47, 49, 484, 531
AspS9I	GGNCC	2 cut(s)	179, 259
AsuC2I	CCSGG	1 cut(s)	183
AsuHPI	GGTGA	3 cut(s)	190, 384, 391
AsuII	TTCGAA	1 cut(s)	610
AvaI	CYCGRG	3 cut(s)	170, 263, 737
AvaII	GGWCC	2 cut(s)	179, 259
BaeGI	GKGCMC	1 cut(s)	290
BalI	TGGCCA	1 cut(s)	368
BanI	GGYRCC	2 cut(s)	185, 791
BanII	GRGCYC	1 cut(s)	621
BbsI	GAAGAC	1 cut(s)	954
Bbv12I	GWGCWC	1 cut(s)	333
BbvI	GCAGC	1 cut(s)	496
BccI	CCATC	3 cut(s)	650, 811, 832
BceAI	ACGGC	3 cut(s)	40, 221, 779
BciT130I	CCWGG	4 cut(s)	284, 489, 533, 622
BcnI	CCSGG	1 cut(s)	183
BcoDI	GTCTC	3 cut(s)	547, 797, 890
BfmI	CTRYAG	2 cut(s)	603, 758
BfoI	RGCGCY	1 cut(s)	532
BfuAI	ACCTGC	1 cut(s)	433
BisI	GCNGC	1 cut(s)	485
BlsI	GCNGC	1 cut(s)	486
Bme1390I	CCNGG	5 cut(s)	183, 284, 489, 533, 622
Bme18I	GGWCC	2 cut(s)	179, 259
BmeT110I	CYCGRG	3 cut(s)	170, 263, 737
BmgT120I	GGNCC	2 cut(s)	179, 259
BmiI	GGNNCC	3 cut(s)	181, 187, 793
BmrFI	CCNGG	5 cut(s)	183, 284, 489, 533, 622
BmsI	GCATC	3 cut(s)	78, 156, 424
BpiI	GAAGAC	1 cut(s)	954
BplI	GAGNNNNNCTC	2 cut(s)	315, 347
Bpu10I	CCTNAGC	1 cut(s)	537
Bpu14I	TTCGAA	1 cut(s)	610
BpuEI	CTTGAG	2 cut(s)	89, 317
BpuMI	CCSGG	1 cut(s)	183
BsaAI	YACGTR	1 cut(s)	980
BsaHI	GRCGYC	2 cut(s)	53, 162
BsaI	GGTCTC	2 cut(s)	547, 797
BsaJI	CCNNGG	4 cut(s)	283, 488, 620, 795
BsaWI	WCCGGW	1 cut(s)	188
BsaXI	ACNNNNNCTCC	1 cut(s)	30
Bsc4I	CCNNNNNNNGG	4 cut(s)	62, 188, 532, 538
Bse118I	RCCGGY	2 cut(s)	188, 218
Bse3DI	GCAATG	1 cut(s)	474
BseBI	CCWGG	4 cut(s)	284, 489, 533, 622
BseDI	CCNNGG	4 cut(s)	283, 488, 620, 795
BseGI	GGATG	5 cut(s)	99, 165, 372, 661, 847
BseLI	CCNNNNNNNGG	4 cut(s)	62, 188, 532, 538
BseMI	GCAATG	1 cut(s)	474
BseMII	CTCAG	3 cut(s)	330, 551, 742
BsePI	GCGCGC	1 cut(s)	45
BseRI	GAGGAG	4 cut(s)	282, 379, 589, 815
BseSI	GKGCMC	1 cut(s)	290
BseXI	GCAGC	1 cut(s)	496
BseYI	CCCAGC	1 cut(s)	525
Bsh1236I	CGCG	1 cut(s)	47
BshFI	GGCC	2 cut(s)	93, 368
BshNI	GGYRCC	2 cut(s)	185, 791
BshTI	ACCGGT	1 cut(s)	188
BsiHKAI	GWGCWC	1 cut(s)	333
BsiHKCI	CYCGRG	3 cut(s)	170, 263, 737
BsiSI	CCGG	4 cut(s)	144, 183, 189, 219
BslFI	GGGAC	2 cut(s)	165, 506
BslI	CCNNNNNNNGG	4 cut(s)	62, 188, 532, 538
BsmAI	GTCTC	3 cut(s)	547, 797, 890
BsmFI	GGGAC	2 cut(s)	165, 506
BsnI	GGCC	2 cut(s)	93, 368
Bso31I	GGTCTC	2 cut(s)	547, 797
BsoBI	CYCGRG	3 cut(s)	170, 263, 737
Bsp119I	TTCGAA	1 cut(s)	610
Bsp1286I	GDGCHC	3 cut(s)	290, 333, 621
Bsp143I	GATC	1 cut(s)	174
BspACI	CCGC	6 cut(s)	5, 38, 304, 577, 584, 667
BspANI	GGCC	2 cut(s)	93, 368
BspCNI	CTCAG	3 cut(s)	331, 550, 741
BspFNI	CGCG	1 cut(s)	47
BspLI	GGNNCC	3 cut(s)	181, 187, 793
BspMAI	CTGCAG	1 cut(s)	762
BspMI	ACCTGC	1 cut(s)	433
BspT104I	TTCGAA	1 cut(s)	610
BspT107I	GGYRCC	2 cut(s)	185, 791
BspTNI	GGTCTC	2 cut(s)	547, 797
BsrDI	GCAATG	1 cut(s)	474
BsrFI	RCCGGY	2 cut(s)	188, 218
BssAI	RCCGGY	2 cut(s)	188, 218
BssECI	CCNNGG	4 cut(s)	283, 488, 620, 795
BssHII	GCGCGC	1 cut(s)	45
BssMI	GATC	1 cut(s)	174
BssNI	GRCGYC	2 cut(s)	53, 162
Bst2UI	CCWGG	4 cut(s)	284, 489, 533, 622
Bst4CI	ACNGT	3 cut(s)	506, 517, 881
Bst6I	CTCTTC	1 cut(s)	120
BstACI	GRCGYC	2 cut(s)	53, 162
BstBAI	YACGTR	1 cut(s)	980
BstBI	TTCGAA	1 cut(s)	610
BstC8I	GCNNGC	4 cut(s)	47, 95, 220, 762
BstDEI	CTNAG	3 cut(s)	339, 537, 728
BstDSI	CCRYGG	1 cut(s)	795
BstENI	CCTNNNNNAGG	1 cut(s)	536
BstF5I	GGATG	5 cut(s)	99, 165, 372, 661, 847
BstFNI	CGCG	1 cut(s)	47
BstH2I	RGCGCY	1 cut(s)	532
BstHHI	GCGC	4 cut(s)	47, 49, 484, 531
BstKTI	GATC	1 cut(s)	177
BstMAI	GTCTC	3 cut(s)	547, 797, 890
BstMBI	GATC	1 cut(s)	174
BstMWI	GCNNNNNNNGC	1 cut(s)	44
BstNI	CCWGG	4 cut(s)	284, 489, 533, 622
BstSCI	CCNGG	5 cut(s)	181, 282, 487, 531, 620
BstSFI	CTRYAG	2 cut(s)	603, 758
BstSLI	GKGCMC	1 cut(s)	290
BstUI	CGCG	1 cut(s)	47
BstV1I	GCAGC	1 cut(s)	496
BstV2I	GAAGAC	1 cut(s)	954
BsuRI	GGCC	2 cut(s)	93, 368
BtgI	CCRYGG	1 cut(s)	795
BtgZI	GCGATG	1 cut(s)	217
BtsCI	GGATG	5 cut(s)	99, 165, 372, 661, 847
BveI	ACCTGC	1 cut(s)	433
Cac8I	GCNNGC	4 cut(s)	47, 95, 220, 762
CaiI	CAGNNNCTG	1 cut(s)	532
CfoI	GCGC	4 cut(s)	47, 49, 484, 531
Cfr10I	RCCGGY	2 cut(s)	188, 218
Cfr13I	GGNCC	2 cut(s)	179, 259
CseI	GACGC	2 cut(s)	61, 257
Csp6I	GTAC	1 cut(s)	186
CspAI	ACCGGT	1 cut(s)	188
CviQI	GTAC	1 cut(s)	186
DdeI	CTNAG	3 cut(s)	339, 537, 728
DpnI	GATC	1 cut(s)	176
DpnII	GATC	1 cut(s)	174
DrdI	GACNNNNNNGTC	1 cut(s)	131
DseDI	GACNNNNNNGTC	1 cut(s)	131
EaeI	YGGCCR	1 cut(s)	366
Eam1104I	CTCTTC	1 cut(s)	120
EarI	CTCTTC	1 cut(s)	120
EciI	GGCGGA	2 cut(s)	566, 573
Eco24I	GRGCYC	1 cut(s)	621
Eco31I	GGTCTC	2 cut(s)	547, 797
Eco47I	GGWCC	2 cut(s)	179, 259
Eco57I	CTGAAG	1 cut(s)	254
Eco88I	CYCGRG	3 cut(s)	170, 263, 737
EcoNI	CCTNNNNNAGG	1 cut(s)	536
EcoRI	GAATTC	2 cut(s)	905, 1004
EcoRII	CCWGG	4 cut(s)	282, 487, 531, 620
EcoT38I	GRGCYC	1 cut(s)	621
FaiI	YATR	7 cut(s)	131, 257, 359, 361, 446, 750, 833
FaqI	GGGAC	2 cut(s)	165, 506
FauI	CCCGC	1 cut(s)	31
FblI	GTMKAC	1 cut(s)	123
Fnu4HI	GCNGC	1 cut(s)	485
FokI	GGATG	5 cut(s)	86, 152, 359, 668, 854
FriOI	GRGCYC	1 cut(s)	621
Fsp4HI	GCNGC	1 cut(s)	485
FspI	TGCGCA	1 cut(s)	483
GlaI	GCGC	4 cut(s)	46, 48, 483, 530
GluI	GCNGC	1 cut(s)	485
GsaI	CCCAGC	1 cut(s)	529
HaeII	RGCGCY	1 cut(s)	532
HaeIII	GGCC	2 cut(s)	93, 368
HapII	CCGG	4 cut(s)	144, 183, 189, 219
HgaI	GACGC	2 cut(s)	61, 257
HhaI	GCGC	4 cut(s)	47, 49, 484, 531
Hin1I	GRCGYC	2 cut(s)	53, 162
Hin6I	GCGC	4 cut(s)	45, 47, 482, 529
HinP1I	GCGC	4 cut(s)	45, 47, 482, 529
HincII	GTYRAC	3 cut(s)	124, 520, 595
HindII	GTYRAC	3 cut(s)	124, 520, 595
HindIII	AAGCTT	2 cut(s)	206, 968
HinfI	GANTC	3 cut(s)	125, 279, 596
HpaI	GTTAAC	1 cut(s)	520
HpaII	CCGG	4 cut(s)	144, 183, 189, 219
HphI	GGTGA	3 cut(s)	190, 384, 391
Hpy166II	GTNNAC	4 cut(s)	124, 520, 595, 640
Hpy188I	TCNGA	3 cut(s)	434, 904, 1003
Hpy188III	TCNNGA	8 cut(s)	106, 136, 172, 212, 334, 739, 931, 1032
Hpy8I	GTNNAC	4 cut(s)	124, 520, 595, 640
Hpy99I	CGWCG	3 cut(s)	125, 164, 279
HpyAV	CCTTC	9 cut(s)	22, 28, 85, 220, 412, 558, 640, 884, 928
HpyCH4III	ACNGT	3 cut(s)	506, 517, 881
HpyCH4IV	ACGT	2 cut(s)	162, 979
HpyCH4V	TGCA	5 cut(s)	415, 467, 760, 887, 1011
HpyF10VI	GCNNNNNNNGC	1 cut(s)	44
HpyF3I	CTNAG	3 cut(s)	339, 537, 728
HpySE526I	ACGT	2 cut(s)	162, 979
Hsp92I	GRCGYC	2 cut(s)	53, 162
HspAI	GCGC	4 cut(s)	45, 47, 482, 529
KpnI	GGTACC	1 cut(s)	189
KroI	GCCGGC	1 cut(s)	218
KroNI	GCCGGC	1 cut(s)	220
KspAI	GTTAAC	1 cut(s)	520
Kzo9I	GATC	1 cut(s)	174
Lsp1109I	GCAGC	1 cut(s)	496
LweI	GCATC	3 cut(s)	78, 156, 424
MaeII	ACGT	2 cut(s)	162, 979
MaeIII	GTNAC	2 cut(s)	408, 988
MalI	GATC	1 cut(s)	176
MboI	GATC	1 cut(s)	174
MboII	GAAGA	5 cut(s)	107, 542, 697, 754, 954
MhlI	GDGCHC	3 cut(s)	290, 333, 621
MlsI	TGGCCA	1 cut(s)	368
MluCI	AATT	8 cut(s)	461, 571, 612, 629, 745, 905, 974, 1004
MluNI	TGGCCA	1 cut(s)	368
MlyI	GAGTC	2 cut(s)	119, 590
MmeI	TCCRAC	2 cut(s)	324, 541
Mox20I	TGGCCA	1 cut(s)	368
MroNI	GCCGGC	1 cut(s)	218
MroXI	GAANNNNTTC	1 cut(s)	572
MscI	TGGCCA	1 cut(s)	368
MseI	TTAA	3 cut(s)	519, 768, 972
Msp20I	TGGCCA	1 cut(s)	368
MspI	CCGG	4 cut(s)	144, 183, 189, 219
MspR9I	CCNGG	5 cut(s)	183, 284, 489, 533, 622
MvaI	CCWGG	4 cut(s)	284, 489, 533, 622
MvnI	CGCG	1 cut(s)	47
MwoI	GCNNNNNNNGC	1 cut(s)	44
NaeI	GCCGGC	1 cut(s)	220
NciI	CCSGG	1 cut(s)	183
NdeII	GATC	1 cut(s)	174
NgoMIV	GCCGGC	1 cut(s)	218
NlaIV	GGNNCC	3 cut(s)	181, 187, 793
NsbI	TGCGCA	1 cut(s)	483
NspV	TTCGAA	1 cut(s)	610
PaeR7I	CTCGAG	3 cut(s)	170, 263, 737
PauI	GCGCGC	1 cut(s)	45
PcsI	WCGNNNNNNNCGW	3 cut(s)	168, 360, 701
PdiI	GCCGGC	1 cut(s)	220
PdmI	GAANNNNTTC	1 cut(s)	572
PfeI	GAWTC	1 cut(s)	279
PflMI	CCANNNNNTGG	1 cut(s)	532
PinAI	ACCGGT	1 cut(s)	188
PkrI	GCNGC	1 cut(s)	486
PleI	GAGTC	2 cut(s)	119, 590
PpsI	GAGTC	2 cut(s)	119, 590
Ppu21I	YACGTR	1 cut(s)	980
PsiI	TTATAA	2 cut(s)	446, 750
Psp6I	CCWGG	4 cut(s)	282, 487, 531, 620
PspFI	CCCAGC	1 cut(s)	525
PspGI	CCWGG	4 cut(s)	282, 487, 531, 620
PspN4I	GGNNCC	3 cut(s)	181, 187, 793
PspPI	GGNCC	2 cut(s)	179, 259
PspXI	VCTCGAGB	1 cut(s)	263
PstI	CTGCAG	1 cut(s)	762
PstNI	CAGNNNCTG	1 cut(s)	532
PteI	GCGCGC	1 cut(s)	45
RsaI	GTAC	1 cut(s)	187
RsaNI	GTAC	1 cut(s)	186
SalI	GTCGAC	1 cut(s)	122
SaqAI	TTAA	3 cut(s)	519, 768, 972
SatI	GCNGC	1 cut(s)	485
Sau3AI	GATC	1 cut(s)	174
Sau96I	GGNCC	2 cut(s)	179, 259
SbfI	CCTGCAGG	1 cut(s)	762
SchI	GAGTC	2 cut(s)	119, 590
ScrFI	CCNGG	5 cut(s)	183, 284, 489, 533, 622
SdaI	CCTGCAGG	1 cut(s)	762
SduI	GDGCHC	3 cut(s)	290, 333, 621
SfaNI	GCATC	3 cut(s)	78, 156, 424
SfcI	CTRYAG	2 cut(s)	603, 758
Sfr274I	CTCGAG	3 cut(s)	170, 263, 737
SfuI	TTCGAA	1 cut(s)	610
SinI	GGWCC	2 cut(s)	179, 259
SlaI	CTCGAG	3 cut(s)	170, 263, 737
SmlI	CTYRAG	5 cut(s)	104, 170, 263, 332, 737
SmoI	CTYRAG	5 cut(s)	104, 170, 263, 332, 737
Sse8387I	CCTGCAGG	1 cut(s)	762
Sse9I	AATT	8 cut(s)	461, 571, 612, 629, 745, 905, 974, 1004
SsiI	CCGC	6 cut(s)	5, 38, 304, 577, 584, 667
StyD4I	CCNGG	5 cut(s)	181, 282, 487, 531, 620
TaaI	ACNGT	3 cut(s)	506, 517, 881
TaiI	ACGT	2 cut(s)	165, 982
TaqI	TCGA	7 cut(s)	123, 171, 264, 354, 610, 704, 738
TaqII	GACCGA	1 cut(s)	167
TasI	AATT	8 cut(s)	461, 571, 612, 629, 745, 905, 974, 1004
TfiI	GAWTC	1 cut(s)	279
Tru1I	TTAA	3 cut(s)	519, 768, 972
Tru9I	TTAA	3 cut(s)	519, 768, 972
TseI	GCWGC	1 cut(s)	484
TspDTI	ATGAA	2 cut(s)	825, 876
Van91I	CCANNNNNTGG	1 cut(s)	532
VpaK11BI	GGWCC	2 cut(s)	179, 259
XagI	CCTNNNNNAGG	1 cut(s)	536
XapI	RAATTY	3 cut(s)	461, 905, 1004
XcmI	CCANNNNNNNNNTGG	2 cut(s)	208, 814
XhoI	CTCGAG	3 cut(s)	170, 263, 737
XmiI	GTMKAC	1 cut(s)	123
XmnI	GAANNNNTTC	1 cut(s)	572
ZraI	GACGTC	1 cut(s)	163

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.