Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0015293

Physical Location & Seq

Genomic Coordinates Forward (+)

17936441 .. 17945050

Gene Structure 8610 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001594

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGGAGGACATTGAGGATTTGTTCATTGGTGGCGGAGGAGCTCCTCCGGGTTTCCGCCTGCCGATTACATCCGTCGGACTCAATCCAAAGAAGAAGAAGAAGAACAACAAGAAGAAACCGGATCTCAATGGCAACCTCTCTCAAATCAAACACCCACTCGCTCCTCTCTCCCCTAAAGTCCCTGGCACTGAGACTATATATATCAAGACATTTGGATGCTCCCACAACCAGAGTGACAGCGAATATATGGCTGGTCAACTTTCAGCTTTTGGTTATTCATTAAGTGACAATCCTGAGGATGCAGACCTATGGCTCATAAATACATGCACAGTTAAATCTCCAAGCCAATCTGCCATGGACACTCTGATAGCAAAAGGCAAAGGTGCGAAAAAGCCCCTAGTGGTAGCTGGGTGTGTGCCTCAAGGAAGTCGAGATATAAAGGAGCTAGATGGTGTCAGTATAGTAGGAGTCCAGCAAATTGACCGTGTGGTTGAAATTGTTGAAGAAACTTTGAAAGGTCACGAGGTGCGGCTTTTAAGCCGTAAGACATTGCCAGCACTGGACCTCCCTAAGGTGAGAAAAAACAAGTTCGTTGAGATTCTTCCCATTAATGTTGGCTGTTTAGGTGCTTGCACATACTGCAAAACAAAGCATGCCCGTGGTCATTTAGGGAGTTACACCGTTGATGGACTTGTGGGACGTGTAAAATCTGTGATAGCTGATGGAGTCAGGGAAATATGGTTGAGCAGTGAAGATACTGGAGCATATGGTCGTGACATTGGGGTCAATCTACCTATTTTATTGAATGCAATTGTCAAGGAGCTTCCTCCTGATGCAAGCACAATGCTTCGAATTGGAATGACGAATCCCCCTTTCATTCTAGAGCACTTGAAAGAAATTGCGGAGGTGTTGCGGCATCCATGTGTATACTCATTTCTTCATGTACCAGTCCAATCTGGAAGTGATGCCGTCTTGACTGCAATGAATCGAGAATATACAGTGAGTGAGTTCAAGACTGTTGTAGATACTTTAACTGAGCTTGTGCCAGGGATGCAGATTGCAACTGATATAATTTGTGGATTTCCCGGTGAAACGGATGAAGATTTTGCTCAAACTCGTGACCTTATCAAGGAGTACAAGTTTCCTCAAGTTCATATTTCACAGTTCTATCCTCGACCTGGAACACCTGCTGCAAGGATGAAAAAGGTCCCCAGTACTGTAGTGAAGAATAGGAGTCGTGAATTAACTTCGGTTTTTGAAGCTTTCACCCCGTATGTTGGAATGGAAGGCAGGGTGGAAAGGATTTGGATAACAGAAGTTGCCACTGATGGTACTCACTTGGTCGGTCATACCAAGGGATACGTGCAGGTGCTTGTAGCTGGTCCAGAAAGTATGCTGGGGACTTCAGCTATTGTGAAGATAACGTCAGTTGGAAGGTGGTCGGTATTTGGAGAAGTGATTGAGACTATCCCTGAATCGAATGATAAAGCAGCTGTGGGAAAAGAAAGGCAGAGTCAGGAGAATTGTTCCCCCTGCTCGAACAATTTTGAGACCTGTGTTTGTTCAACAGAGCCTGAAACTTGTGCTTGTGGACCAGAAAGTTGTGGAGAACAGGCTACATTGACAAAATGTTCTGTAACAACTACTGGCGTTCCACTGGAAGATCAGAACAACAGAAATCTGATTGGATGGTTACTAAGGAAGCGAAAGAACCAAGTTCAGAAATTAGTGGAGAACGAAATTGACTTGGGATTGAAGAAAAAGCAAGAGCAGACCCAAGAAAGCATTGGTAAATGGGGTGTTCTGGATAAGGCTCTTCTAGGTGGGATGCTTGCGAGCTTCCTGACTATTGTAGCTGTACTAGTACATCTTGGATTTAGAATTATGTCATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0012505 GO:0016070 GO:0016740 GO:0016782 GO:0034470 GO:0034641 GO:0034660 GO:0035596 GO:0035598 GO:0035600 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050497 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Radical_SAM TRAM UPF0004

Protein Analysis

632

Amino Acids

68.81

Weight (kDa)

7.14

Isoelectric Point (pI)

39.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UPF0004	PF00919	66 - 144	6.9e-21	Uncharacterized protein family UPF0004
Radical_SAM	PF04055	203 - 376	6.3e-20	Radical SAM superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72090
fragaria_vesca	FvH4_5g32030
malus_domestica	MD08G1219300.v1.1 MD15G1407900.v1.1
prunus_persica	Prupe.1G553700_v2.0.a1
pyrus_communis	pycom08g19030 pycom15g36400
rosa_chinensis	RchiOBHm_Chr7g0228031
rosa_laevigata	RLG00000001594
rosa_multiflora	Rmu_sc0004858.1_g000015
rosa_roxburghii	Rroxscaffold_3G00231640
rosa_rugosa	Rorug07G0245400
rosa_samantha	Rh7AG399200 Rh7CG417300 Rh7DG394700
rosa_wichuraiana	Rw7G033180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1195, 1357
AasI	GACNNNNNNGTC	1 cut(s)	782
Acc36I	ACCTGC	2 cut(s)	1195, 1357
AccI	GTMKAC	1 cut(s)	927
AciI	CCGC	5 cut(s)	33, 55, 529, 902, 913
AclWI	GGATC	1 cut(s)	129
AcuI	CTGAAG	1 cut(s)	1389
AdeI	CACNNNGTG	1 cut(s)	526
AfaI	GTAC	6 cut(s)	945, 1136, 1216, 1333, 1860, 1866
AfiI	CCNNNNNNNGG	4 cut(s)	571, 1129, 1178, 1277
AflIII	ACRYGT	1 cut(s)	700
AgsI	TTSAA	9 cut(s)	494, 503, 514, 805, 892, 1012, 1259, 1566, 1756
AhlI	ACTAGT	1 cut(s)	1861
AjiI	CACGTC	1 cut(s)	701
AjnI	CCWGG	3 cut(s)	181, 1045, 1177
Alw21I	GWGCWC	2 cut(s)	43, 888
Alw26I	GTCTC	3 cut(s)	185, 1457, 1544
AlwI	GGATC	1 cut(s)	129
AlwNI	CAGNNNCTG	1 cut(s)	1574
ApeKI	GCWGC	2 cut(s)	1190, 1490
AseI	ATTAAT	1 cut(s)	609
AspS9I	GGNCC	4 cut(s)	562, 1207, 1382, 1592
AsuC2I	CCSGG	2 cut(s)	48, 1086
AsuHPI	GGTGA	3 cut(s)	586, 1100, 1258
AsuII	TTCGAA	1 cut(s)	850
AvaII	GGWCC	4 cut(s)	562, 1207, 1382, 1592
AxyI	CCTNAGG	2 cut(s)	294, 570
BanII	GRGCYC	1 cut(s)	43
BauI	CACGAG	2 cut(s)	521, 1116
Bbv12I	GWGCWC	2 cut(s)	43, 888
BbvI	GCAGC	2 cut(s)	1177, 1502
BccI	CCATC	5 cut(s)	443, 680, 716, 1322, 1683
BceAI	ACGGC	2 cut(s)	525, 953
BciT130I	CCWGG	3 cut(s)	183, 1047, 1179
BciVI	GTATCC	1 cut(s)	1352
BcnI	CCSGG	2 cut(s)	48, 1086
BcoDI	GTCTC	3 cut(s)	185, 1457, 1544
BcuI	ACTAGT	1 cut(s)	1861
BfaI	CTAG	6 cut(s)	398, 446, 881, 1820, 1862, 1894
BfmI	CTRYAG	1 cut(s)	1218
BfuAI	ACCTGC	2 cut(s)	1195, 1357
BfuI	GTATCC	1 cut(s)	1352
BisI	GCNGC	4 cut(s)	530, 914, 1191, 1491
BlsI	GCNGC	4 cut(s)	531, 915, 1192, 1492
BmcAI	AGTACT	1 cut(s)	1216
Bme1390I	CCNGG	5 cut(s)	48, 183, 1047, 1086, 1179
Bme18I	GGWCC	4 cut(s)	562, 1207, 1382, 1592
BmgBI	CACGTC	1 cut(s)	701
BmgT120I	GGNCC	4 cut(s)	562, 1207, 1382, 1592
BmiI	GGNNCC	1 cut(s)	1209
BmrFI	CCNGG	5 cut(s)	48, 183, 1047, 1086, 1179
BmrI	ACTGGG	1 cut(s)	1206
BmsI	GCATC	7 cut(s)	206, 289, 823, 925, 955, 1041, 1818
BmuI	ACTGGG	1 cut(s)	1206
BpmI	CTGGAG	1 cut(s)	780
Bpu14I	TTCGAA	1 cut(s)	850
BpuEI	CTTGAG	2 cut(s)	405, 1131
BpuMI	CCSGG	2 cut(s)	48, 1086
BsaAI	YACGTR	1 cut(s)	1363
BsaI	GGTCTC	1 cut(s)	1544
BsaJI	CCNNGG	5 cut(s)	181, 354, 658, 1046, 1353
BsaWI	WCCGGW	1 cut(s)	118
BsaXI	ACNNNNNCTCC	4 cut(s)	549, 579, 1124, 1154
Bsc4I	CCNNNNNNNGG	4 cut(s)	571, 1129, 1178, 1277
Bse1I	ACTGG	6 cut(s)	564, 763, 947, 1212, 1651, 1662
Bse21I	CCTNAGG	2 cut(s)	294, 570
Bse3DI	GCAATG	2 cut(s)	548, 987
BseBI	CCWGG	3 cut(s)	183, 1047, 1179
BseDI	CCNNGG	5 cut(s)	181, 354, 658, 1046, 1353
BseLI	CCNNNNNNNGG	4 cut(s)	571, 1129, 1178, 1277
BseMI	GCAATG	2 cut(s)	548, 987
BseMII	CTCAG	3 cut(s)	180, 285, 1026
BseNI	ACTGG	6 cut(s)	564, 763, 947, 1212, 1651, 1662
BseRI	GAGGAG	3 cut(s)	33, 51, 153
BseXI	GCAGC	2 cut(s)	1177, 1502
BseYI	CCCAGC	2 cut(s)	407, 1396
BsgI	GTGCAG	1 cut(s)	1385
BsiHKAI	GWGCWC	2 cut(s)	43, 888
BsiSI	CCGG	3 cut(s)	47, 119, 1086
BslFI	GGGAC	4 cut(s)	164, 711, 1193, 1414
BslI	CCNNNNNNNGG	4 cut(s)	571, 1129, 1178, 1277
BsmAI	GTCTC	3 cut(s)	185, 1457, 1544
BsmFI	GGGAC	4 cut(s)	164, 711, 1193, 1414
BsmI	GAATGC	1 cut(s)	811
Bso31I	GGTCTC	1 cut(s)	1544
Bsp119I	TTCGAA	1 cut(s)	850
Bsp1286I	GDGCHC	2 cut(s)	43, 888
Bsp143I	GATC	2 cut(s)	121, 1663
Bsp19I	CCATGG	1 cut(s)	354
BspACI	CCGC	5 cut(s)	33, 55, 529, 902, 913
BspCNI	CTCAG	3 cut(s)	181, 286, 1027
BspLI	GGNNCC	1 cut(s)	1209
BspMI	ACCTGC	2 cut(s)	1195, 1357
BspPI	GGATC	1 cut(s)	129
BspQI	GCTCTTC	1 cut(s)	1821
BspT104I	TTCGAA	1 cut(s)	850
BspTNI	GGTCTC	1 cut(s)	1544
BsrDI	GCAATG	2 cut(s)	548, 987
BsrI	ACTGG	6 cut(s)	564, 763, 947, 1212, 1651, 1662
BssECI	CCNNGG	5 cut(s)	181, 354, 658, 1046, 1353
BssMI	GATC	2 cut(s)	121, 1663
BssNAI	GTATAC	1 cut(s)	928
BssSI	CACGAG	2 cut(s)	521, 1116
BssT1I	CCWWGG	2 cut(s)	354, 1353
Bst1107I	GTATAC	1 cut(s)	928
Bst2BI	CACGAG	2 cut(s)	521, 1116
Bst2UI	CCWGG	3 cut(s)	183, 1047, 1179
Bst4CI	ACNGT	7 cut(s)	331, 485, 682, 1000, 1018, 1164, 1219
Bst6I	CTCTTC	1 cut(s)	1821
BstAPI	GCANNNNNTGC	1 cut(s)	639
BstBAI	YACGTR	1 cut(s)	1363
BstBI	TTCGAA	1 cut(s)	850
BstC8I	GCNNGC	7 cut(s)	59, 555, 631, 654, 838, 1833, 1837
BstDEI	CTNAG	5 cut(s)	189, 294, 570, 1035, 1697
BstDSI	CCRYGG	2 cut(s)	354, 658
BstENI	CCTNNNNNAGG	2 cut(s)	569, 1127
BstKTI	GATC	2 cut(s)	124, 1666
BstMAI	GTCTC	3 cut(s)	185, 1457, 1544
BstMBI	GATC	2 cut(s)	121, 1663
BstMWI	GCNNNNNNNGC	2 cut(s)	639, 1051
BstNI	CCWGG	3 cut(s)	183, 1047, 1179
BstNSI	RCATGY	2 cut(s)	327, 656
BstSCI	CCNGG	5 cut(s)	46, 181, 1045, 1084, 1177
BstSFI	CTRYAG	1 cut(s)	1218
BstV1I	GCAGC	2 cut(s)	1177, 1502
BstX2I	RGATCY	1 cut(s)	121
BstYI	RGATCY	1 cut(s)	121
BstZ17I	GTATAC	1 cut(s)	928
Bsu36I	CCTNAGG	2 cut(s)	294, 570
BsuI	GTATCC	1 cut(s)	1352
BtgI	CCRYGG	2 cut(s)	354, 658
BtrI	CACGTC	1 cut(s)	701
BtsI	GCAGTG	1 cut(s)	754
BtsIMutI	CAGTG	6 cut(s)	186, 557, 754, 1005, 1323, 1655
BveI	ACCTGC	2 cut(s)	1195, 1357
Cac8I	GCNNGC	7 cut(s)	59, 555, 631, 654, 838, 1833, 1837
CaiI	CAGNNNCTG	1 cut(s)	1574
Cfr13I	GGNCC	4 cut(s)	562, 1207, 1382, 1592
Csp6I	GTAC	6 cut(s)	944, 1135, 1215, 1332, 1859, 1865
CviAII	CATG	5 cut(s)	324, 355, 653, 921, 941
CviQI	GTAC	6 cut(s)	944, 1135, 1215, 1332, 1859, 1865
DdeI	CTNAG	5 cut(s)	189, 294, 570, 1035, 1697
DpnI	GATC	2 cut(s)	123, 1665
DpnII	GATC	2 cut(s)	121, 1663
DraIII	CACNNNGTG	1 cut(s)	526
DrdI	GACNNNNNNGTC	1 cut(s)	782
DseDI	GACNNNNNNGTC	1 cut(s)	782
Eam1104I	CTCTTC	1 cut(s)	1821
EarI	CTCTTC	1 cut(s)	1821
EciI	GGCGGA	2 cut(s)	44, 48
Ecl136II	GAGCTC	1 cut(s)	41
Eco130I	CCWWGG	2 cut(s)	354, 1353
Eco24I	GRGCYC	1 cut(s)	43
Eco31I	GGTCTC	1 cut(s)	1544
Eco47I	GGWCC	4 cut(s)	562, 1207, 1382, 1592
Eco53kI	GAGCTC	1 cut(s)	41
Eco57I	CTGAAG	1 cut(s)	1389
Eco81I	CCTNAGG	2 cut(s)	294, 570
EcoICRI	GAGCTC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	2 cut(s)	569, 1127
EcoO109I	RGGNCCY	1 cut(s)	1207
EcoRII	CCWGG	3 cut(s)	181, 1045, 1177
EcoT14I	CCWWGG	2 cut(s)	354, 1353
EcoT38I	GRGCYC	1 cut(s)	43
ErhI	CCWWGG	2 cut(s)	354, 1353
FaeI	CATG	5 cut(s)	327, 358, 656, 924, 944
FaqI	GGGAC	4 cut(s)	164, 711, 1193, 1414
FatI	CATG	5 cut(s)	323, 354, 652, 920, 940
FauNDI	CATATG	1 cut(s)	766
FblI	GTMKAC	1 cut(s)	927
Fnu4HI	GCNGC	4 cut(s)	530, 914, 1191, 1491
FriOI	GRGCYC	1 cut(s)	43
Fsp4HI	GCNGC	4 cut(s)	530, 914, 1191, 1491
FspBI	CTAG	6 cut(s)	398, 446, 881, 1820, 1862, 1894
GluI	GCNGC	4 cut(s)	530, 914, 1191, 1491
GsaI	CCCAGC	2 cut(s)	411, 1400
GsuI	CTGGAG	1 cut(s)	780
HapII	CCGG	3 cut(s)	47, 119, 1086
Hin1II	CATG	5 cut(s)	327, 358, 656, 924, 944
HincII	GTYRAC	1 cut(s)	257
HindII	GTYRAC	1 cut(s)	257
HindIII	AAGCTT	1 cut(s)	1260
HinfI	GANTC	9 cut(s)	78, 468, 598, 726, 865, 985, 1234, 1475, 1513
HpaII	CCGG	3 cut(s)	47, 119, 1086
HphI	GGTGA	3 cut(s)	586, 1100, 1258
Hpy166II	GTNNAC	3 cut(s)	257, 928, 1592
Hpy188I	TCNGA	5 cut(s)	77, 366, 1668, 1683, 1722
Hpy8I	GTNNAC	3 cut(s)	257, 928, 1592
Hpy99I	CGWCG	1 cut(s)	77
HpyAV	CCTTC	2 cut(s)	1280, 1428
HpyCH4III	ACNGT	7 cut(s)	331, 485, 682, 1000, 1018, 1164, 1219
HpyCH4IV	ACGT	3 cut(s)	700, 1362, 1424
HpyF10VI	GCNNNNNNNGC	2 cut(s)	639, 1051
HpyF3I	CTNAG	5 cut(s)	189, 294, 570, 1035, 1697
HpySE526I	ACGT	3 cut(s)	700, 1362, 1424
Hsp92II	CATG	5 cut(s)	327, 358, 656, 924, 944
Kzo9I	GATC	2 cut(s)	121, 1663
LguI	GCTCTTC	1 cut(s)	1821
LmnI	GCTCC	7 cut(s)	38, 46, 166, 224, 442, 761, 820
Lsp1109I	GCAGC	2 cut(s)	1177, 1502
LweI	GCATC	7 cut(s)	206, 289, 823, 925, 955, 1041, 1818
MaeI	CTAG	6 cut(s)	398, 446, 881, 1820, 1862, 1894
MaeII	ACGT	3 cut(s)	700, 1362, 1424
MaeIII	GTNAC	8 cut(s)	233, 284, 518, 674, 773, 1118, 1636, 1692
MalI	GATC	2 cut(s)	123, 1665
MboI	GATC	2 cut(s)	121, 1663
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	1 cut(s)	121
MhlI	GDGCHC	2 cut(s)	43, 888
MlyI	GAGTC	5 cut(s)	72, 477, 735, 1243, 1522
MmeI	TCCRAC	3 cut(s)	55, 1258, 1411
MseI	TTAA	6 cut(s)	281, 333, 536, 609, 1031, 1244
MslI	CAYNNNNRTG	3 cut(s)	214, 657, 921
MspA1I	CMGCKG	1 cut(s)	1493
MspI	CCGG	3 cut(s)	47, 119, 1086
MspR9I	CCNGG	5 cut(s)	48, 183, 1047, 1086, 1179
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	1 cut(s)	811
MvaI	CCWGG	3 cut(s)	183, 1047, 1179
MwoI	GCNNNNNNNGC	2 cut(s)	639, 1051
NciI	CCSGG	2 cut(s)	48, 1086
NcoI	CCATGG	1 cut(s)	354
NdeI	CATATG	1 cut(s)	766
NdeII	GATC	2 cut(s)	121, 1663
NlaIII	CATG	5 cut(s)	327, 358, 656, 924, 944
NlaIV	GGNNCC	1 cut(s)	1209
NmuCI	GTSAC	5 cut(s)	233, 284, 518, 773, 1118
NspI	RCATGY	2 cut(s)	327, 656
NspV	TTCGAA	1 cut(s)	850
PaeI	GCATGC	1 cut(s)	656
PaqCI	CACCTGC	2 cut(s)	1195, 1357
PciSI	GCTCTTC	1 cut(s)	1821
PctI	GAATGC	1 cut(s)	811
PfeI	GAWTC	4 cut(s)	598, 865, 985, 1475
PkrI	GCNGC	4 cut(s)	531, 915, 1192, 1492
PleI	GAGTC	5 cut(s)	72, 476, 734, 1242, 1521
PpsI	GAGTC	5 cut(s)	72, 476, 734, 1242, 1521
Ppu21I	YACGTR	1 cut(s)	1363
PpuMI	RGGWCCY	1 cut(s)	1207
PshBI	ATTAAT	1 cut(s)	609
Psp124BI	GAGCTC	1 cut(s)	43
Psp5II	RGGWCCY	1 cut(s)	1207
Psp6I	CCWGG	3 cut(s)	181, 1045, 1177
PspFI	CCCAGC	2 cut(s)	407, 1396
PspGI	CCWGG	3 cut(s)	181, 1045, 1177
PspN4I	GGNNCC	1 cut(s)	1209
PspPI	GGNCC	4 cut(s)	562, 1207, 1382, 1592
PspPPI	RGGWCCY	1 cut(s)	1207
PstNI	CAGNNNCTG	1 cut(s)	1574
PsuI	RGATCY	1 cut(s)	121
PvuII	CAGCTG	1 cut(s)	1493
RsaI	GTAC	6 cut(s)	945, 1136, 1216, 1333, 1860, 1866
RsaNI	GTAC	6 cut(s)	944, 1135, 1215, 1332, 1859, 1865
RseI	CAYNNNNRTG	3 cut(s)	214, 657, 921
SacI	GAGCTC	1 cut(s)	43
SapI	GCTCTTC	1 cut(s)	1821
SaqAI	TTAA	6 cut(s)	281, 333, 536, 609, 1031, 1244
SatI	GCNGC	4 cut(s)	530, 914, 1191, 1491
Sau3AI	GATC	2 cut(s)	121, 1663
Sau96I	GGNCC	4 cut(s)	562, 1207, 1382, 1592
ScaI	AGTACT	1 cut(s)	1216
SchI	GAGTC	5 cut(s)	72, 477, 735, 1243, 1522
ScrFI	CCNGG	5 cut(s)	48, 183, 1047, 1086, 1179
SduI	GDGCHC	2 cut(s)	43, 888
SfaNI	GCATC	7 cut(s)	206, 289, 823, 925, 955, 1041, 1818
SfcI	CTRYAG	1 cut(s)	1218
SfuI	TTCGAA	1 cut(s)	850
SinI	GGWCC	4 cut(s)	562, 1207, 1382, 1592
SmiMI	CAYNNNNRTG	3 cut(s)	214, 657, 921
SmlI	CTYRAG	2 cut(s)	420, 1146
SmoI	CTYRAG	2 cut(s)	420, 1146
SpeI	ACTAGT	1 cut(s)	1861
SphI	GCATGC	1 cut(s)	656
SsiI	CCGC	5 cut(s)	33, 55, 529, 902, 913
SspMI	CTAG	6 cut(s)	398, 446, 881, 1820, 1862, 1894
SstI	GAGCTC	1 cut(s)	43
StyD4I	CCNGG	5 cut(s)	46, 181, 1045, 1084, 1177
StyI	CCWWGG	2 cut(s)	354, 1353
TaaI	ACNGT	7 cut(s)	331, 485, 682, 1000, 1018, 1164, 1219
TaiI	ACGT	3 cut(s)	703, 1365, 1427
TaqI	TCGA	6 cut(s)	430, 850, 988, 1174, 1478, 1538
TaqII	GACCGA	1 cut(s)	1334
TatI	WGTACW	4 cut(s)	1134, 1214, 1858, 1864
TauI	GCSGC	2 cut(s)	532, 916
TfiI	GAWTC	4 cut(s)	598, 865, 985, 1475
Tru1I	TTAA	6 cut(s)	281, 333, 536, 609, 1031, 1244
Tru9I	TTAA	6 cut(s)	281, 333, 536, 609, 1031, 1244
TscAI	CASTG	6 cut(s)	193, 564, 754, 1005, 1330, 1662
TseFI	GTSAC	5 cut(s)	233, 284, 518, 773, 1118
TseI	GCWGC	2 cut(s)	1190, 1490
Tsp45I	GTSAC	5 cut(s)	233, 284, 518, 773, 1118
TspDTI	ATGAA	8 cut(s)	13, 267, 865, 929, 998, 1113, 1142, 1214
TspGWI	ACGGA	2 cut(s)	61, 1109
TspRI	CASTG	6 cut(s)	193, 564, 754, 1005, 1330, 1662
VpaK11BI	GGWCC	4 cut(s)	562, 1207, 1382, 1592
VspI	ATTAAT	1 cut(s)	609
XagI	CCTNNNNNAGG	2 cut(s)	569, 1127
XbaI	TCTAGA	1 cut(s)	880
XceI	RCATGY	2 cut(s)	327, 656
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1784
XmiI	GTMKAC	1 cut(s)	927
XspI	CTAG	6 cut(s)	398, 446, 881, 1820, 1862, 1894
ZrmI	AGTACT	1 cut(s)	1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.