Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0015293

Physical Location & Seq

Genomic Coordinates Forward (+)

16913046 .. 16925738

Gene Structure 12693 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00231640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGGAGGACATTGAGGATTTGTTCATTGGTGGCGGAGGAGCTCCTCCCGGTTTCCGCTTGCCGATTACGTCCGTCGGACTCAATCCAAAGAAGAACAACAACAACAACAAGAAGAAACCCGATCTCAATGGCAACCTCTCTCAAATCAAACATCCACTCGCTCCTCTCTCCCCTAAAGTCCCTGGCACTCAGGCTATATATATCAAGACATTTGGATGCTCCCACAACCAGAGTGACAGCGAATATATGGCTGGTCAACTTTCAGCTTTTGGTTATTCATTAAGTGACAATCCTGAGGATGCAGACCTATGGCTCATAAATACGTATTTGGATGAAGATGATATGTTTTGTGGAGAAGTGTTGGGAGGAAGTGTAATTCTTGTTAGATGCACAGTTAAATCTCCAAGCCAATCTGCCATGGACACTCTGATAGCAAAGGGCAAAGGGGCGAAAAAGCCCCTGGTGGTAGCTGGGTGTGTGCCTCAAGGAAGTCGAGATATAAAGGAGCTAGATGGTGTCAGTATAGTAGGAGTCCAGCAAATTGACCGTGTGGTTGAAATTGTTGAAGAAACTTTGAAAGGTCACGAGGTGCGGCTTTTAAGCCGTAAGACATTGCCAGCACTGGACCTCCCTAAGGTGAGAAAAAACAAGTTCGTTGAGATTCTTCCCATCAATGTTGGCTGTTTAGGTGCTTGCACATACTGCAAAACAAAGCATGCCCGTGGTCATTTAGGGAGTTACACCATTGATGGACTTGTGGGACGTGTAAAATCTGTGATAGCTGATGGAGTCAGGGAAATATGGTTGAGCAGTGAAGATACTGGAGCATATGGTCGTGACATTGGGGTCAATCTACCTATTTTATTGAATGCAATTGTCAAGGAGCTTCCTCCTGATACAAGCACAATGCTTCGAATTGGAATGACGAATCCCCCTTTCATTCTAGAGCACTTGAAAGAAATTGCAGAGGTGTTGCGGCATCCATGTGTATACTCATTTCTTCATGTACCAGTGCAATCTGGAAGTGATGCCGTCTTGACTGCAATGAATCGAGAATATACAGTGAGTGAGTTCAAGACTGTTGTAGATACTTTAACTGAGCTTGTGCCAGGGATGCAGATTGCAACTGATATAATTTGTGGATTTCCCGGTGAAACGGATGAAGATTTTGCTCAAACTCGTGACCTTATCAAGGAGTACAAGTTTCCTCAAGTTCATATTTCACAGTTCTATCCTCGACCTGGAACACCTGCTGCAAGGATGAAAAAGGTCCCCAGTACCGTAGTGAAGAATAGGAGTCGTGAATTAACTTCGGTTTTTGAAGCTTTCACCCCGTATGTTGGAATGGAAGGCAGGGTGGAAAGGATTTGGATAACAGAAGTTGCCACTGATGGTACTCACTTGGTCGGTCATACCAAGGGATACGTGCAGGTGCTTGTAGCTGGTCCAGAAAGTATGCTGGGGACTTCAGCTATTGTGAAGATAACGTCAGTTGGAAGGTGGTCGGTATTTGGAGAAGTAATTGAGACTATCCCTGAATCGAATGATAAAGCAGCTGTGGGAAAAGAAAGGCAGAGTCAGGAGAATTGTTTCCCCTGCTCGAACAATTTTGAGACTTGTGCTTGTTCAACAGAGCCTGAAACTTGTGCTTGTGGACCAGAAAGTTGTGGAGAACAGGCTACATTGACAAAATGTTCTGTAACAACTACTGGCGTTCCACTTGAAGATCAGAACAACAGAAATCTGATTGGATGGTTACTAAGGAAGCGAAAGAACCAAGTTCAGAAATTCGTGGAGAATGAAATTGACTTGGGATTAAAGAAAAAGCAAGAGCAGACCCAAGAAAGCATTGGTAAATGGGGTGTTGTGGATAAGGCTCTTCTAGGTGGGATACTTGCGAGCTTCCTGACTATTGTAGCTGTACTAGTACATCTTGGATTTAGAATTATGTCATCTAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0012505 GO:0016070 GO:0016740 GO:0016782 GO:0034470 GO:0034641 GO:0034660 GO:0035596 GO:0035598 GO:0035600 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050497 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Radical_SAM TRAM UPF0004

Protein Analysis

653

Amino Acids

71.26

Weight (kDa)

6.24

Isoelectric Point (pI)

39.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UPF0004	PF00919	66 - 108	6.5e-11	Uncharacterized protein family UPF0004
Radical_SAM	PF04055	224 - 397	1.5e-19	Radical SAM superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72090
fragaria_vesca	FvH4_5g32030
malus_domestica	MD08G1219300.v1.1 MD15G1407900.v1.1
prunus_persica	Prupe.1G553700_v2.0.a1
pyrus_communis	pycom08g19030 pycom15g36400
rosa_chinensis	RchiOBHm_Chr7g0228031
rosa_laevigata	RLG00000001594
rosa_multiflora	Rmu_sc0004858.1_g000015
rosa_roxburghii	Rroxscaffold_3G00231640
rosa_rugosa	Rorug07G0245400
rosa_samantha	Rh7AG399200 Rh7CG417300 Rh7DG394700
rosa_wichuraiana	Rw7G033180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1258, 1420
AasI	GACNNNNNNGTC	1 cut(s)	845
Acc36I	ACCTGC	2 cut(s)	1258, 1420
AccI	GTMKAC	1 cut(s)	990
AciI	CCGC	4 cut(s)	33, 55, 592, 976
AcsI	RAATTY	1 cut(s)	1787
AcuI	CTGAAG	1 cut(s)	1452
AdeI	CACNNNGTG	1 cut(s)	589
AfaI	GTAC	6 cut(s)	1008, 1199, 1279, 1396, 1923, 1929
AfiI	CCNNNNNNNGG	4 cut(s)	634, 1192, 1241, 1340
AflIII	ACRYGT	1 cut(s)	763
AgsI	TTSAA	9 cut(s)	557, 566, 577, 868, 955, 1075, 1322, 1629, 1724
AhlI	ACTAGT	1 cut(s)	1924
AjiI	CACGTC	1 cut(s)	764
AjnI	CCWGG	4 cut(s)	181, 459, 1108, 1240
Alw21I	GWGCWC	2 cut(s)	43, 951
Alw26I	GTCTC	2 cut(s)	1520, 1607
AlwNI	CAGNNNCTG	1 cut(s)	1637
ApeKI	GCWGC	2 cut(s)	1253, 1553
ApoI	RAATTY	1 cut(s)	1787
Asp700I	GAANNNNTTC	1 cut(s)	1589
AspS9I	GGNCC	4 cut(s)	625, 1270, 1445, 1655
AsuC2I	CCSGG	2 cut(s)	48, 1149
AsuHPI	GGTGA	3 cut(s)	649, 1163, 1321
AsuII	TTCGAA	1 cut(s)	913
AvaII	GGWCC	4 cut(s)	625, 1270, 1445, 1655
AxyI	CCTNAGG	2 cut(s)	294, 633
BanII	GRGCYC	1 cut(s)	43
BauI	CACGAG	2 cut(s)	584, 1179
Bbv12I	GWGCWC	2 cut(s)	43, 951
BbvI	GCAGC	2 cut(s)	1240, 1565
BccI	CCATC	6 cut(s)	506, 677, 743, 779, 1385, 1746
BceAI	ACGGC	2 cut(s)	588, 1016
BciT130I	CCWGG	4 cut(s)	183, 461, 1110, 1242
BciVI	GTATCC	2 cut(s)	1415, 1884
BcnI	CCSGG	2 cut(s)	48, 1149
BcoDI	GTCTC	2 cut(s)	1520, 1607
BcuI	ACTAGT	1 cut(s)	1924
BfaI	CTAG	4 cut(s)	509, 944, 1883, 1925
BfuAI	ACCTGC	2 cut(s)	1258, 1420
BfuI	GTATCC	2 cut(s)	1415, 1884
BisI	GCNGC	4 cut(s)	593, 977, 1254, 1554
BlsI	GCNGC	4 cut(s)	594, 978, 1255, 1555
Bme1390I	CCNGG	6 cut(s)	48, 183, 461, 1110, 1149, 1242
Bme18I	GGWCC	4 cut(s)	625, 1270, 1445, 1655
BmgBI	CACGTC	1 cut(s)	764
BmgT120I	GGNCC	4 cut(s)	625, 1270, 1445, 1655
BmiI	GGNNCC	1 cut(s)	1272
BmrFI	CCNGG	6 cut(s)	48, 183, 461, 1110, 1149, 1242
BmrI	ACTGGG	1 cut(s)	1269
BmsI	GCATC	6 cut(s)	206, 289, 377, 988, 1018, 1104
BmuI	ACTGGG	1 cut(s)	1269
BpmI	CTGGAG	1 cut(s)	843
Bpu14I	TTCGAA	1 cut(s)	913
BpuEI	CTTGAG	2 cut(s)	468, 1194
BpuMI	CCSGG	2 cut(s)	48, 1149
BsaAI	YACGTR	2 cut(s)	324, 1426
BsaJI	CCNNGG	6 cut(s)	181, 417, 459, 721, 1109, 1416
BsaXI	ACNNNNNCTCC	6 cut(s)	357, 387, 612, 642, 1187, 1217
Bsc4I	CCNNNNNNNGG	4 cut(s)	634, 1192, 1241, 1340
Bse1I	ACTGG	5 cut(s)	627, 826, 1010, 1275, 1714
Bse21I	CCTNAGG	2 cut(s)	294, 633
Bse3DI	GCAATG	2 cut(s)	611, 1050
BseBI	CCWGG	4 cut(s)	183, 461, 1110, 1242
BseDI	CCNNGG	6 cut(s)	181, 417, 459, 721, 1109, 1416
BseGI	GGATG	9 cut(s)	151, 221, 304, 337, 979, 1119, 1165, 1266, 1757
BseLI	CCNNNNNNNGG	4 cut(s)	634, 1192, 1241, 1340
BseMI	GCAATG	2 cut(s)	611, 1050
BseMII	CTCAG	3 cut(s)	203, 285, 1089
BseNI	ACTGG	5 cut(s)	627, 826, 1010, 1275, 1714
BseRI	GAGGAG	3 cut(s)	33, 51, 153
BseXI	GCAGC	2 cut(s)	1240, 1565
BseYI	CCCAGC	2 cut(s)	470, 1459
BsgI	GTGCAG	1 cut(s)	1448
BsiHKAI	GWGCWC	2 cut(s)	43, 951
BsiSI	CCGG	2 cut(s)	48, 1149
BslFI	GGGAC	4 cut(s)	164, 774, 1256, 1477
BslI	CCNNNNNNNGG	4 cut(s)	634, 1192, 1241, 1340
BsmAI	GTCTC	2 cut(s)	1520, 1607
BsmFI	GGGAC	4 cut(s)	164, 774, 1256, 1477
BsmI	GAATGC	1 cut(s)	874
Bsp119I	TTCGAA	1 cut(s)	913
Bsp1286I	GDGCHC	2 cut(s)	43, 951
Bsp143I	GATC	2 cut(s)	121, 1726
Bsp19I	CCATGG	1 cut(s)	417
BspACI	CCGC	4 cut(s)	33, 55, 592, 976
BspCNI	CTCAG	3 cut(s)	202, 286, 1090
BspLI	GGNNCC	1 cut(s)	1272
BspMI	ACCTGC	2 cut(s)	1258, 1420
BspQI	GCTCTTC	1 cut(s)	1884
BspT104I	TTCGAA	1 cut(s)	913
BsrDI	GCAATG	2 cut(s)	611, 1050
BsrI	ACTGG	5 cut(s)	627, 826, 1010, 1275, 1714
BssECI	CCNNGG	6 cut(s)	181, 417, 459, 721, 1109, 1416
BssMI	GATC	2 cut(s)	121, 1726
BssNAI	GTATAC	1 cut(s)	991
BssSI	CACGAG	2 cut(s)	584, 1179
BssT1I	CCWWGG	2 cut(s)	417, 1416
Bst1107I	GTATAC	1 cut(s)	991
Bst2BI	CACGAG	2 cut(s)	584, 1179
Bst2UI	CCWGG	4 cut(s)	183, 461, 1110, 1242
Bst4CI	ACNGT	6 cut(s)	394, 548, 1063, 1081, 1227, 1282
Bst6I	CTCTTC	1 cut(s)	1884
BstAPI	GCANNNNNTGC	1 cut(s)	702
BstBAI	YACGTR	2 cut(s)	324, 1426
BstBI	TTCGAA	1 cut(s)	913
BstC8I	GCNNGC	5 cut(s)	59, 618, 694, 717, 1900
BstDEI	CTNAG	6 cut(s)	189, 294, 633, 1098, 1760, 1956
BstDSI	CCRYGG	2 cut(s)	417, 721
BstENI	CCTNNNNNAGG	2 cut(s)	632, 1190
BstF5I	GGATG	9 cut(s)	151, 221, 304, 337, 979, 1119, 1165, 1266, 1757
BstKTI	GATC	2 cut(s)	124, 1729
BstMAI	GTCTC	2 cut(s)	1520, 1607
BstMBI	GATC	2 cut(s)	121, 1726
BstMWI	GCNNNNNNNGC	2 cut(s)	702, 1114
BstNI	CCWGG	4 cut(s)	183, 461, 1110, 1242
BstNSI	RCATGY	1 cut(s)	719
BstSCI	CCNGG	6 cut(s)	46, 181, 459, 1108, 1147, 1240
BstSNI	TACGTA	1 cut(s)	324
BstV1I	GCAGC	2 cut(s)	1240, 1565
BstZ17I	GTATAC	1 cut(s)	991
Bsu36I	CCTNAGG	2 cut(s)	294, 633
BsuI	GTATCC	2 cut(s)	1415, 1884
BtgI	CCRYGG	2 cut(s)	417, 721
BtrI	CACGTC	1 cut(s)	764
BtsCI	GGATG	9 cut(s)	151, 221, 304, 337, 979, 1119, 1165, 1266, 1757
BtsI	GCAGTG	1 cut(s)	817
BtsIMutI	CAGTG	5 cut(s)	620, 817, 1017, 1068, 1386
BveI	ACCTGC	2 cut(s)	1258, 1420
Cac8I	GCNNGC	5 cut(s)	59, 618, 694, 717, 1900
CaiI	CAGNNNCTG	1 cut(s)	1637
Cfr13I	GGNCC	4 cut(s)	625, 1270, 1445, 1655
Csp6I	GTAC	6 cut(s)	1007, 1198, 1278, 1395, 1922, 1928
CviAII	CATG	4 cut(s)	418, 716, 984, 1004
CviQI	GTAC	6 cut(s)	1007, 1198, 1278, 1395, 1922, 1928
DdeI	CTNAG	6 cut(s)	189, 294, 633, 1098, 1760, 1956
DpnI	GATC	2 cut(s)	123, 1728
DpnII	GATC	2 cut(s)	121, 1726
DraIII	CACNNNGTG	1 cut(s)	589
DrdI	GACNNNNNNGTC	1 cut(s)	845
DseDI	GACNNNNNNGTC	1 cut(s)	845
Eam1104I	CTCTTC	1 cut(s)	1884
EarI	CTCTTC	1 cut(s)	1884
EciI	GGCGGA	1 cut(s)	48
Ecl136II	GAGCTC	1 cut(s)	41
Eco105I	TACGTA	1 cut(s)	324
Eco130I	CCWWGG	2 cut(s)	417, 1416
Eco24I	GRGCYC	1 cut(s)	43
Eco47I	GGWCC	4 cut(s)	625, 1270, 1445, 1655
Eco53kI	GAGCTC	1 cut(s)	41
Eco57I	CTGAAG	1 cut(s)	1452
Eco81I	CCTNAGG	2 cut(s)	294, 633
EcoICRI	GAGCTC	1 cut(s)	41
EcoNI	CCTNNNNNAGG	2 cut(s)	632, 1190
EcoO109I	RGGNCCY	1 cut(s)	1270
EcoRII	CCWGG	4 cut(s)	181, 459, 1108, 1240
EcoT14I	CCWWGG	2 cut(s)	417, 1416
EcoT38I	GRGCYC	1 cut(s)	43
ErhI	CCWWGG	2 cut(s)	417, 1416
FaeI	CATG	4 cut(s)	421, 719, 987, 1007
FaqI	GGGAC	4 cut(s)	164, 774, 1256, 1477
FatI	CATG	4 cut(s)	417, 715, 983, 1003
FauNDI	CATATG	1 cut(s)	829
FblI	GTMKAC	1 cut(s)	990
Fnu4HI	GCNGC	4 cut(s)	593, 977, 1254, 1554
FokI	GGATG	9 cut(s)	138, 228, 311, 344, 966, 1126, 1172, 1273, 1764
FriOI	GRGCYC	1 cut(s)	43
Fsp4HI	GCNGC	4 cut(s)	593, 977, 1254, 1554
FspBI	CTAG	4 cut(s)	509, 944, 1883, 1925
GluI	GCNGC	4 cut(s)	593, 977, 1254, 1554
GsaI	CCCAGC	2 cut(s)	474, 1463
GsuI	CTGGAG	1 cut(s)	843
HapII	CCGG	2 cut(s)	48, 1149
Hin1II	CATG	4 cut(s)	421, 719, 987, 1007
HincII	GTYRAC	1 cut(s)	257
HindII	GTYRAC	1 cut(s)	257
HindIII	AAGCTT	1 cut(s)	1323
HinfI	GANTC	9 cut(s)	78, 531, 661, 789, 928, 1048, 1297, 1538, 1576
HpaII	CCGG	2 cut(s)	48, 1149
HphI	GGTGA	3 cut(s)	649, 1163, 1321
Hpy166II	GTNNAC	3 cut(s)	257, 991, 1655
Hpy188I	TCNGA	5 cut(s)	77, 429, 1731, 1746, 1785
Hpy8I	GTNNAC	3 cut(s)	257, 991, 1655
Hpy99I	CGWCG	1 cut(s)	77
HpyAV	CCTTC	2 cut(s)	1343, 1491
HpyCH4III	ACNGT	6 cut(s)	394, 548, 1063, 1081, 1227, 1282
HpyCH4IV	ACGT	5 cut(s)	68, 323, 763, 1425, 1487
HpyF10VI	GCNNNNNNNGC	2 cut(s)	702, 1114
HpyF3I	CTNAG	6 cut(s)	189, 294, 633, 1098, 1760, 1956
HpySE526I	ACGT	5 cut(s)	68, 323, 763, 1425, 1487
Hsp92II	CATG	4 cut(s)	421, 719, 987, 1007
Kzo9I	GATC	2 cut(s)	121, 1726
LguI	GCTCTTC	1 cut(s)	1884
LmnI	GCTCC	7 cut(s)	38, 46, 166, 224, 505, 824, 883
Lsp1109I	GCAGC	2 cut(s)	1240, 1565
LweI	GCATC	6 cut(s)	206, 289, 377, 988, 1018, 1104
MaeI	CTAG	4 cut(s)	509, 944, 1883, 1925
MaeII	ACGT	5 cut(s)	68, 323, 763, 1425, 1487
MaeIII	GTNAC	8 cut(s)	233, 284, 581, 737, 836, 1181, 1699, 1755
MalI	GATC	2 cut(s)	123, 1728
MboI	GATC	2 cut(s)	121, 1726
MfeI	CAATTG	1 cut(s)	873
MhlI	GDGCHC	2 cut(s)	43, 951
MlyI	GAGTC	5 cut(s)	72, 540, 798, 1306, 1585
MmeI	TCCRAC	3 cut(s)	55, 1321, 1474
MroXI	GAANNNNTTC	1 cut(s)	1589
MseI	TTAA	6 cut(s)	281, 396, 599, 1094, 1307, 1817
MslI	CAYNNNNRTG	3 cut(s)	214, 720, 984
MspA1I	CMGCKG	1 cut(s)	1556
MspI	CCGG	2 cut(s)	48, 1149
MspR9I	CCNGG	6 cut(s)	48, 183, 461, 1110, 1149, 1242
MunI	CAATTG	1 cut(s)	873
Mva1269I	GAATGC	1 cut(s)	874
MvaI	CCWGG	4 cut(s)	183, 461, 1110, 1242
MwoI	GCNNNNNNNGC	2 cut(s)	702, 1114
NciI	CCSGG	2 cut(s)	48, 1149
NcoI	CCATGG	1 cut(s)	417
NdeI	CATATG	1 cut(s)	829
NdeII	GATC	2 cut(s)	121, 1726
NlaIII	CATG	4 cut(s)	421, 719, 987, 1007
NlaIV	GGNNCC	1 cut(s)	1272
NmuCI	GTSAC	5 cut(s)	233, 284, 581, 836, 1181
NspI	RCATGY	1 cut(s)	719
NspV	TTCGAA	1 cut(s)	913
PaeI	GCATGC	1 cut(s)	719
PaqCI	CACCTGC	2 cut(s)	1258, 1420
PciSI	GCTCTTC	1 cut(s)	1884
PctI	GAATGC	1 cut(s)	874
PdmI	GAANNNNTTC	1 cut(s)	1589
PfeI	GAWTC	4 cut(s)	661, 928, 1048, 1538
PkrI	GCNGC	4 cut(s)	594, 978, 1255, 1555
PleI	GAGTC	5 cut(s)	72, 539, 797, 1305, 1584
PpsI	GAGTC	5 cut(s)	72, 539, 797, 1305, 1584
Ppu21I	YACGTR	2 cut(s)	324, 1426
PpuMI	RGGWCCY	1 cut(s)	1270
Psp124BI	GAGCTC	1 cut(s)	43
Psp5II	RGGWCCY	1 cut(s)	1270
Psp6I	CCWGG	4 cut(s)	181, 459, 1108, 1240
PspFI	CCCAGC	2 cut(s)	470, 1459
PspGI	CCWGG	4 cut(s)	181, 459, 1108, 1240
PspN4I	GGNNCC	1 cut(s)	1272
PspPI	GGNCC	4 cut(s)	625, 1270, 1445, 1655
PspPPI	RGGWCCY	1 cut(s)	1270
PstNI	CAGNNNCTG	1 cut(s)	1637
PvuII	CAGCTG	1 cut(s)	1556
RsaI	GTAC	6 cut(s)	1008, 1199, 1279, 1396, 1923, 1929
RsaNI	GTAC	6 cut(s)	1007, 1198, 1278, 1395, 1922, 1928
RseI	CAYNNNNRTG	3 cut(s)	214, 720, 984
SacI	GAGCTC	1 cut(s)	43
SapI	GCTCTTC	1 cut(s)	1884
SaqAI	TTAA	6 cut(s)	281, 396, 599, 1094, 1307, 1817
SatI	GCNGC	4 cut(s)	593, 977, 1254, 1554
Sau3AI	GATC	2 cut(s)	121, 1726
Sau96I	GGNCC	4 cut(s)	625, 1270, 1445, 1655
SchI	GAGTC	5 cut(s)	72, 540, 798, 1306, 1585
ScrFI	CCNGG	6 cut(s)	48, 183, 461, 1110, 1149, 1242
SduI	GDGCHC	2 cut(s)	43, 951
SfaNI	GCATC	6 cut(s)	206, 289, 377, 988, 1018, 1104
SfuI	TTCGAA	1 cut(s)	913
SinI	GGWCC	4 cut(s)	625, 1270, 1445, 1655
SmiMI	CAYNNNNRTG	3 cut(s)	214, 720, 984
SmlI	CTYRAG	2 cut(s)	483, 1209
SmoI	CTYRAG	2 cut(s)	483, 1209
SnaBI	TACGTA	1 cut(s)	324
SpeI	ACTAGT	1 cut(s)	1924
SphI	GCATGC	1 cut(s)	719
SsiI	CCGC	4 cut(s)	33, 55, 592, 976
SspMI	CTAG	4 cut(s)	509, 944, 1883, 1925
SstI	GAGCTC	1 cut(s)	43
StyD4I	CCNGG	6 cut(s)	46, 181, 459, 1108, 1147, 1240
StyI	CCWWGG	2 cut(s)	417, 1416
TaaI	ACNGT	6 cut(s)	394, 548, 1063, 1081, 1227, 1282
TaiI	ACGT	5 cut(s)	71, 326, 766, 1428, 1490
TaqI	TCGA	6 cut(s)	493, 913, 1051, 1237, 1541, 1601
TaqII	GACCGA	1 cut(s)	1397
TatI	WGTACW	3 cut(s)	1197, 1921, 1927
TauI	GCSGC	2 cut(s)	595, 979
TfiI	GAWTC	4 cut(s)	661, 928, 1048, 1538
Tru1I	TTAA	6 cut(s)	281, 396, 599, 1094, 1307, 1817
Tru9I	TTAA	6 cut(s)	281, 396, 599, 1094, 1307, 1817
TscAI	CASTG	5 cut(s)	627, 817, 1017, 1068, 1393
TseFI	GTSAC	5 cut(s)	233, 284, 581, 836, 1181
TseI	GCWGC	2 cut(s)	1253, 1553
Tsp45I	GTSAC	5 cut(s)	233, 284, 581, 836, 1181
TspGWI	ACGGA	2 cut(s)	61, 1172
TspRI	CASTG	5 cut(s)	627, 817, 1017, 1068, 1393
VpaK11BI	GGWCC	4 cut(s)	625, 1270, 1445, 1655
XagI	CCTNNNNNAGG	2 cut(s)	632, 1190
XapI	RAATTY	1 cut(s)	1787
XbaI	TCTAGA	1 cut(s)	943
XceI	RCATGY	1 cut(s)	719
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1847
XmiI	GTMKAC	1 cut(s)	990
XmnI	GAANNNNTTC	1 cut(s)	1589
XspI	CTAG	4 cut(s)	509, 944, 1883, 1925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.