Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003712

Physical Location & Seq

Genomic Coordinates Forward (+)

43604436 .. 43608594

Gene Structure 4159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003046

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGGTTTCGAGGTCTTATTCCAACTTACTTGACCTTACTTCTGGTGATTCCCTGACTTTTGGCCGTGAGAAGAAGAGGTTCCCGCGAGTTGCTACTGTTGCGGGAGTATTGTCTGAGCTAGATGATGATACCAGTAATAATAGTGTTGGCTCTGATGCTCCTTCGTCCATTTCTCAAGACCGGATGATCATAGTAGGGAATCAGCTTCCACTTCGGGCGCATAGAAGTGATGATGGGGAATGGTGCTTTAGCTGGGATGAGGATTCACTACTCTTGCAACTCAAAGATGGCCTTGGAGAAGATGTAGAAGTTATCTATATTGGTTGTCTAAAAGAAGAAATTGACCCAAGTGAGCAAGAGGATGTAGCCCAAACTTTGCTTGATACTTTTAAATGTGTCCCTGCATTTATCCCTCCGAACCTTTTCAGTAAATTTTATCATGGCTTCTGTAAGCAGCATTTGTGGCCTTTGTTTCACTACATGCTTCCTCTATCACCGGATCTCGGTGGCAGGTTTGATCGATCTCTGTGGCAAGCTTATGTTTCTGTGAACAAGATATTTGCAGATAAAGTGATGGAAGTTATTAGCCCGGATGAAGATTTTGTGTGGGTTCATGACTACCATTTGATGATTTTGCCAACATTCTTGAGGAAGAGGTTTAATAGGTTGAAGCTTGGATTCTTTCTCCATAGTCCATTTCCTTCGTCTGAGATATACAGAACACTTCCAGTAAGGGATGAGCTTCTAAGAGCACTTCTAAATTCTGATCTCATTGGCTTCCATACTTTTGATTATGCTAGGCACTTCCTTTCTTGTTGTAGTAGAATGCTTGGCCTCTCATATCAATCGAAGAGGGGATACATTGGGCTCGAGTATTATGGTCGGACAGTAAGCATTAAGATTCTTCCTGTTGGGATACATATAGGCCAGCTACAATCTGTGTTGAATCTGCCAGAGACTGAATCTAAGGTTGCTGAGCTGCAAGATCAATTTAGGGGGAAAACTGTTTTGCTTGGGGTTGATGACATGGACATCTTTAAGGGAATTAGCTTGAAACTTTTGGCTATGGAGCAATTGCTTATACAACATCCTGATAAGAGGGGTAAAGTTGTTCTTATTCAAATTGCTAACCCGGCAAGGGGCCGGGGGAAAGATGTCCTGGAGGTCCAGTTAGAAACTGATGCCACAGTGAAGAGGATCAATGAGACATTTGGGAAGCAAGGATATAGTCCAGTGGTCTTGATCAATACCCCACTACAGTTTTATGAGCGAATTGCTTATTATGTTATTGCAGAGTGTTGTCTTGTTACAGCAGTGAGGGACGGGATGAATCTTATACCCTATGAGTACATAATATGCCGCCAAGGAAATGAGAAGCTGAATGAGACTTTAGGACTAAACGCAACAACCCCAAAGAAAAGCATGCTTGTGGTTTCTGAGTTTATTGGGTGTTCTCCATCACTAAGCGGAGCAATTCGAGTTAACCCATGGAACATTGATGCTGTAGTTGAAGCTATGGATTCTGCTCTTATAATCCCAGAAGGAGAAAAACAGTTGCGGCATGAGAAGCATTATAGGTATGTCAGTACACATGATGTTGCATATTGGGCACGTAGTTTCTTGCAGGATCTTGAAAGGGCATGTAAGGATCACATGAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGGTTCAGGGTAATTGCTTTGGATCCAAATTTCAGAAAGCTTTCAGTTGAGCATATTGTTTCAGCTTACAAGAGGACGAAATGTCGAGCAATTCTCTTGGATTATGATGGTGCTATGATGCTGCCGGGTTCAATTATTACCACACCTAATTCAGAGGCTATTGGAATCTTGAACAATTTATGCAATGACCCGAGGAATGTTGTATTTCTTGTTAGTGGGAAAGACAGGAAGACTTTAACTGAGTGGTTCTCTTCTTGTGGGAATCTTGGGATTGCAGCAGAGCATGGCTTTTTTGTGAGGACAAATCATAATGCTGATTGGGAAACGTGCGTCTCTGTTCCTGATTTTGATTGGAAACAGATTGCTGAACCAGTAATGCAGTTATACACTGAAACAACTGATGGTTCTAATATAGAGGCCAAAGAAAGTGCTCTTGTTTGGAATTACCAGTATGCAGATCCAGATTTTGGCTTCTGTCAGGCTAAGGAGCTTCTGGATCACCTGGAAAGTGTTCTTGCCAATGAGCCAGTTTCTGTCAAAAGTGGCCAGCACATTGTAGAAGTTAAACCTCAGGGTGTCAATAAGGGCCGTGTAGCAGAACGCCTCCTCTTGACAATGAAACAGAAGGCAATGCTCCCAGACTTTGTTCTCTGCATTGGGGATGACAGCAAGGCCAAGTACTTCTTGGAAGACACAACTGAGATTGTGAGAATGTTACAGGTCCTTGCCAATGCTTCAGAGCAGGCGGCTAGAAGTACCCCGCAACCTTCTCAGCGAGTTGTTACTGTAGAAAGTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

830

Amino Acids

93.73

Weight (kDa)

5.86

Isoelectric Point (pI)

44.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	61 - 545	1.4e-187	Glycosyltransferase family 20
Trehalose_PPase	PF02358	595 - 786	1.2e-67	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17770 AT4G17770
fragaria_vesca	FvH4_5g22550 FvH4_5g22550 FvH4_5g22550 FvH4_5g22550 FvH4_5g22550 FvH4_5g22550
malus_domestica	MD06G1037500.v1.1
prunus_persica	Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1
pyrus_communis	pycom06g03100
rosa_chinensis	RchiOBHm_Chr7g0210321
rosa_laevigata	RLG00000003046
rosa_multiflora	Rmu_sc0004503.1_g000003 Rmu_sc0017069.1_g000008
rosa_roxburghii	Rroxscaffold_3G00248400
rosa_rugosa	Rorug07G0120600 Rorug07G0120700 Rorug07G0120800 Rorug07G0120800 Rorug07G0120900 Rorug07G0121000 Rorug07G0121000 Rorug07G0121000
rosa_samantha	Rh7BG248600
rosa_wichuraiana	Rw7G021630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1532
Acc36I	ACCTGC	1 cut(s)	501
AccB7I	CCANNNNNTGG	1 cut(s)	2156
AccII	CGCG	1 cut(s)	85
AciI	CCGC	7 cut(s)	83, 101, 1360, 1467, 1558, 2435, 2450
AclWI	GGATC	8 cut(s)	507, 1205, 1635, 1656, 1706, 1719, 2141, 2193
AcoI	YGGCCR	2 cut(s)	61, 2233
AcsI	RAATTY	3 cut(s)	431, 760, 1717
AcuI	CTGAAG	1 cut(s)	2409
AfaI	GTAC	4 cut(s)	1349, 1588, 2369, 2446
AfiI	CCNNNNNNNGG	4 cut(s)	503, 1138, 1139, 2156
AgsI	TTSAA	8 cut(s)	670, 946, 1054, 1121, 1511, 1634, 1821, 1861
AhdI	GACNNNNNGTC	1 cut(s)	1770
AjnI	CCWGG	2 cut(s)	1158, 2190
Alw21I	GWGCWC	2 cut(s)	754, 2122
Alw26I	GTCTC	4 cut(s)	950, 1199, 1379, 2026
AlwI	GGATC	8 cut(s)	507, 1205, 1635, 1656, 1706, 1719, 2141, 2193
AlwNI	CAGNNNCTG	2 cut(s)	959, 2222
Ama87I	CYCGRG	2 cut(s)	869, 1879
ApeKI	GCWGC	4 cut(s)	454, 979, 1810, 1964
ApoI	RAATTY	3 cut(s)	431, 760, 1717
Asp700I	GAANNNNTTC	4 cut(s)	77, 422, 1729, 2199
AspLEI	GCGC	1 cut(s)	220
AspS9I	GGNCC	4 cut(s)	1141, 1165, 2275, 2410
AsuC2I	CCSGG	4 cut(s)	590, 1133, 1145, 1815
AsuHPI	GGTGA	3 cut(s)	56, 486, 2180
AvaI	CYCGRG	2 cut(s)	869, 1879
AvaII	GGWCC	2 cut(s)	1165, 2410
AxyI	CCTNAGG	1 cut(s)	2259
BaeGI	GKGCMC	1 cut(s)	1612
BalI	TGGCCA	1 cut(s)	2235
BamHI	GGATCC	1 cut(s)	1711
BanII	GRGCYC	1 cut(s)	870
BarI	GAAGNNNNNNTAC	2 cut(s)	842, 874
BbsI	GAAGAC	2 cut(s)	1925, 2385
Bbv12I	GWGCWC	2 cut(s)	754, 2122
BbvI	GCAGC	4 cut(s)	466, 966, 1797, 1976
BccI	CCATC	6 cut(s)	227, 281, 568, 1465, 1790, 2084
BceAI	ACGGC	2 cut(s)	48, 2262
BciT130I	CCWGG	2 cut(s)	1160, 2192
BciVI	GTATCC	2 cut(s)	851, 909
BclI	TGATCA	2 cut(s)	186, 1242
BcnI	CCSGG	4 cut(s)	590, 1133, 1145, 1815
BcoDI	GTCTC	4 cut(s)	950, 1199, 1379, 2026
BfaI	CTAG	3 cut(s)	119, 798, 2439
BfmI	CTRYAG	3 cut(s)	1256, 1503, 2475
BfuAI	ACCTGC	1 cut(s)	501
BfuI	GTATCC	2 cut(s)	851, 909
BisI	GCNGC	7 cut(s)	455, 980, 1360, 1559, 1811, 1965, 2436
BlpI	GCTNAGC	1 cut(s)	975
BlsI	GCNGC	7 cut(s)	456, 981, 1361, 1560, 1812, 1966, 2437
BmcAI	AGTACT	1 cut(s)	2369
Bme1390I	CCNGG	6 cut(s)	590, 1133, 1145, 1160, 1815, 2192
Bme18I	GGWCC	2 cut(s)	1165, 2410
BmeRI	GACNNNNNGTC	1 cut(s)	1770
BmeT110I	CYCGRG	2 cut(s)	869, 1879
BmgT120I	GGNCC	4 cut(s)	1141, 1165, 2275, 2410
BmiI	GGNNCC	3 cut(s)	80, 1142, 1713
BmrFI	CCNGG	6 cut(s)	590, 1133, 1145, 1160, 1815, 2192
BmsI	GCATC	5 cut(s)	145, 1171, 1489, 1655, 1797
BpiI	GAAGAC	2 cut(s)	1925, 2385
BplI	GAGNNNNNCTC	4 cut(s)	1767, 1799, 1922, 1954
BpmI	CTGGAG	1 cut(s)	1181
Bpu10I	CCTNAGC	1 cut(s)	2172
Bpu1102I	GCTNAGC	1 cut(s)	975
BpuEI	CTTGAG	2 cut(s)	159, 667
BpuMI	CCSGG	4 cut(s)	590, 1133, 1145, 1815
Bsa29I	ATCGAT	1 cut(s)	520
BsaAI	YACGTR	1 cut(s)	1613
BsaJI	CCNNGG	5 cut(s)	292, 1144, 1363, 1487, 1880
BsaWI	WCCGGW	2 cut(s)	180, 496
BsaXI	ACNNNNNCTCC	4 cut(s)	288, 318, 1154, 1184
Bsc4I	CCNNNNNNNGG	4 cut(s)	503, 1138, 1139, 2156
Bse1I	ACTGG	7 cut(s)	132, 728, 1168, 1232, 2060, 2137, 2216
Bse21I	CCTNAGG	1 cut(s)	2259
Bse3DI	GCAATG	2 cut(s)	1879, 2325
BseBI	CCWGG	2 cut(s)	1160, 2192
BseCI	ATCGAT	1 cut(s)	520
BseDI	CCNNGG	5 cut(s)	292, 1144, 1363, 1487, 1880
BseGI	GGATG	8 cut(s)	189, 262, 367, 598, 742, 1087, 1332, 2356
BseLI	CCNNNNNNNGG	4 cut(s)	503, 1138, 1139, 2156
BseMI	GCAATG	2 cut(s)	1879, 2325
BseMII	CTCAG	8 cut(s)	105, 699, 966, 1428, 1920, 2273, 2379, 2474
BseNI	ACTGG	7 cut(s)	132, 728, 1168, 1232, 2060, 2137, 2216
BseRI	GAGGAG	3 cut(s)	1672, 1675, 2285
BseSI	GKGCMC	1 cut(s)	1612
BseXI	GCAGC	4 cut(s)	466, 966, 1797, 1976
BseYI	CCCAGC	2 cut(s)	252, 1668
Bsh1236I	CGCG	1 cut(s)	85
BshVI	ATCGAT	1 cut(s)	520
BsiHKAI	GWGCWC	2 cut(s)	754, 2122
BsiHKCI	CYCGRG	2 cut(s)	869, 1879
BsiSI	CCGG	6 cut(s)	181, 497, 590, 1133, 1144, 1814
BslFI	GGGAC	2 cut(s)	383, 1334
BslI	CCNNNNNNNGG	4 cut(s)	503, 1138, 1139, 2156
BsmAI	GTCTC	4 cut(s)	950, 1199, 1379, 2026
BsmBI	CGTCTC	1 cut(s)	2026
BsmFI	GGGAC	2 cut(s)	383, 1334
BsmI	GAATGC	1 cut(s)	831
BsoBI	CYCGRG	2 cut(s)	869, 1879
Bsp1286I	GDGCHC	4 cut(s)	754, 870, 1612, 2122
Bsp1720I	GCTNAGC	1 cut(s)	975
Bsp19I	CCATGG	1 cut(s)	1487
BspACI	CCGC	7 cut(s)	83, 101, 1360, 1467, 1558, 2435, 2450
BspCNI	CTCAG	8 cut(s)	106, 700, 967, 1429, 1921, 2272, 2380, 2473
BspDI	ATCGAT	1 cut(s)	520
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	3 cut(s)	80, 1142, 1713
BspMI	ACCTGC	1 cut(s)	501
BspPI	GGATC	8 cut(s)	507, 1205, 1635, 1656, 1706, 1719, 2141, 2193
BsrDI	GCAATG	2 cut(s)	1879, 2325
BsrI	ACTGG	7 cut(s)	132, 728, 1168, 1232, 2060, 2137, 2216
BssECI	CCNNGG	5 cut(s)	292, 1144, 1363, 1487, 1880
BssT1I	CCWWGG	3 cut(s)	292, 1363, 1487
Bst2UI	CCWGG	2 cut(s)	1160, 2192
Bst4CI	ACNGT	7 cut(s)	97, 889, 1006, 1189, 1260, 1554, 2476
Bst6I	CTCTTC	5 cut(s)	68, 647, 845, 1187, 1945
BstBAI	YACGTR	1 cut(s)	1613
BstC8I	GCNNGC	5 cut(s)	534, 929, 1424, 2237, 2433
BstDSI	CCRYGG	1 cut(s)	1487
BstF5I	GGATG	8 cut(s)	189, 262, 367, 598, 742, 1087, 1332, 2356
BstFNI	CGCG	1 cut(s)	85
BstHHI	GCGC	1 cut(s)	220
BstMAI	GTCTC	4 cut(s)	950, 1199, 1379, 2026
BstMWI	GCNNNNNNNGC	5 cut(s)	98, 463, 1133, 1567, 1607
BstNI	CCWGG	2 cut(s)	1160, 2192
BstNSI	RCATGY	3 cut(s)	484, 1426, 1644
BstSCI	CCNGG	6 cut(s)	588, 1131, 1143, 1158, 1813, 2190
BstSFI	CTRYAG	3 cut(s)	1256, 1503, 2475
BstSLI	GKGCMC	1 cut(s)	1612
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	4 cut(s)	466, 966, 1797, 1976
BstV2I	GAAGAC	2 cut(s)	1925, 2385
BstX2I	RGATCY	4 cut(s)	499, 1627, 1711, 2146
BstYI	RGATCY	4 cut(s)	499, 1627, 1711, 2146
Bsu15I	ATCGAT	1 cut(s)	520
Bsu36I	CCTNAGG	1 cut(s)	2259
BsuI	GTATCC	2 cut(s)	851, 909
BsuTUI	ATCGAT	1 cut(s)	520
BtgI	CCRYGG	1 cut(s)	1487
BtsCI	GGATG	8 cut(s)	189, 262, 367, 598, 742, 1087, 1332, 2356
BtsI	GCAGTG	1 cut(s)	1320
BtsIMutI	CAGTG	4 cut(s)	1194, 1239, 1320, 2076
BveI	ACCTGC	1 cut(s)	501
Cac8I	GCNNGC	5 cut(s)	534, 929, 1424, 2237, 2433
CaiI	CAGNNNCTG	2 cut(s)	959, 2222
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	1 cut(s)	220
Cfr13I	GGNCC	4 cut(s)	1141, 1165, 2275, 2410
ClaI	ATCGAT	1 cut(s)	520
CseI	GACGC	1 cut(s)	2008
Csp6I	GTAC	4 cut(s)	1348, 1587, 2368, 2445
CviQI	GTAC	4 cut(s)	1348, 1587, 2368, 2445
DraI	TTTAAA	1 cut(s)	391
DriI	GACNNNNNGTC	1 cut(s)	1770
EaeI	YGGCCR	2 cut(s)	61, 2233
Eam1104I	CTCTTC	5 cut(s)	68, 647, 845, 1187, 1945
Eam1105I	GACNNNNNGTC	1 cut(s)	1770
EarI	CTCTTC	5 cut(s)	68, 647, 845, 1187, 1945
Eco130I	CCWWGG	3 cut(s)	292, 1363, 1487
Eco24I	GRGCYC	1 cut(s)	870
Eco47I	GGWCC	2 cut(s)	1165, 2410
Eco57I	CTGAAG	1 cut(s)	2409
Eco81I	CCTNAGG	1 cut(s)	2259
Eco88I	CYCGRG	2 cut(s)	869, 1879
EcoO109I	RGGNCCY	1 cut(s)	2410
EcoRII	CCWGG	2 cut(s)	1158, 2190
EcoT14I	CCWWGG	3 cut(s)	292, 1363, 1487
EcoT38I	GRGCYC	1 cut(s)	870
ErhI	CCWWGG	3 cut(s)	292, 1363, 1487
Esp3I	CGTCTC	1 cut(s)	2026
FalI	AAGNNNNNCTT	6 cut(s)	276, 308, 1098, 1130, 2357, 2389
FaqI	GGGAC	2 cut(s)	383, 1334
FauI	CCCGC	3 cut(s)	90, 94, 2457
FbaI	TGATCA	2 cut(s)	186, 1242
Fnu4HI	GCNGC	7 cut(s)	455, 980, 1360, 1559, 1811, 1965, 2436
FokI	GGATG	8 cut(s)	196, 269, 374, 605, 749, 1074, 1339, 2363
FriOI	GRGCYC	1 cut(s)	870
Fsp4HI	GCNGC	7 cut(s)	455, 980, 1360, 1559, 1811, 1965, 2436
FspBI	CTAG	3 cut(s)	119, 798, 2439
GlaI	GCGC	1 cut(s)	219
GluI	GCNGC	7 cut(s)	455, 980, 1360, 1559, 1811, 1965, 2436
GsaI	CCCAGC	2 cut(s)	256, 1672
GsuI	CTGGAG	1 cut(s)	1181
HapII	CCGG	6 cut(s)	181, 497, 590, 1133, 1144, 1814
HgaI	GACGC	1 cut(s)	2008
HhaI	GCGC	1 cut(s)	220
Hin6I	GCGC	1 cut(s)	218
HinP1I	GCGC	1 cut(s)	218
HincII	GTYRAC	1 cut(s)	1483
HindII	GTYRAC	1 cut(s)	1483
HindIII	AAGCTT	3 cut(s)	534, 671, 1727
HpaI	GTTAAC	1 cut(s)	1483
HpaII	CCGG	6 cut(s)	181, 497, 590, 1133, 1144, 1814
HphI	GGTGA	3 cut(s)	56, 486, 2180
Hpy166II	GTNNAC	3 cut(s)	550, 1483, 1589
Hpy8I	GTNNAC	3 cut(s)	550, 1483, 1589
HpyAV	CCTTC	5 cut(s)	171, 711, 1535, 2308, 2466
HpyCH4III	ACNGT	7 cut(s)	97, 889, 1006, 1189, 1260, 1554, 2476
HpyCH4IV	ACGT	2 cut(s)	1612, 2015
HpyF10VI	GCNNNNNNNGC	5 cut(s)	98, 463, 1133, 1567, 1607
HpySE526I	ACGT	2 cut(s)	1612, 2015
HspAI	GCGC	1 cut(s)	218
Ksp22I	TGATCA	2 cut(s)	186, 1242
KspAI	GTTAAC	1 cut(s)	1483
LmnI	GCTCC	5 cut(s)	163, 1069, 1469, 2176, 2328
Lsp1109I	GCAGC	4 cut(s)	466, 966, 1797, 1976
LweI	GCATC	5 cut(s)	145, 1171, 1489, 1655, 1797
MaeI	CTAG	3 cut(s)	119, 798, 2439
MaeII	ACGT	2 cut(s)	1612, 2015
MaeIII	GTNAC	3 cut(s)	1306, 2403, 2470
MfeI	CAATTG	1 cut(s)	1073
MflI	RGATCY	4 cut(s)	499, 1627, 1711, 2146
MhlI	GDGCHC	4 cut(s)	754, 870, 1612, 2122
MlsI	TGGCCA	1 cut(s)	2235
MluNI	TGGCCA	1 cut(s)	2235
MmeI	TCCRAC	2 cut(s)	45, 863
Mox20I	TGGCCA	1 cut(s)	2235
MroXI	GAANNNNTTC	4 cut(s)	77, 422, 1729, 2199
MscI	TGGCCA	1 cut(s)	2235
MseI	TTAA	7 cut(s)	390, 660, 897, 1038, 1482, 1925, 2253
MslI	CAYNNNNRTG	2 cut(s)	225, 1427
Msp20I	TGGCCA	1 cut(s)	2235
MspI	CCGG	6 cut(s)	181, 497, 590, 1133, 1144, 1814
MspR9I	CCNGG	6 cut(s)	590, 1133, 1145, 1160, 1815, 2192
MunI	CAATTG	1 cut(s)	1073
Mva1269I	GAATGC	1 cut(s)	831
MvaI	CCWGG	2 cut(s)	1160, 2192
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	5 cut(s)	98, 463, 1133, 1567, 1607
NciI	CCSGG	4 cut(s)	590, 1133, 1145, 1815
NcoI	CCATGG	1 cut(s)	1487
NlaIV	GGNNCC	3 cut(s)	80, 1142, 1713
NspI	RCATGY	3 cut(s)	484, 1426, 1644
PaeI	GCATGC	1 cut(s)	1426
PaeR7I	CTCGAG	1 cut(s)	869
PagI	TCATGA	1 cut(s)	613
PctI	GAATGC	1 cut(s)	831
PdmI	GAANNNNTTC	4 cut(s)	77, 422, 1729, 2199
PflMI	CCANNNNNTGG	1 cut(s)	2156
PfoI	TCCNGGA	1 cut(s)	1158
PkrI	GCNGC	7 cut(s)	456, 981, 1361, 1560, 1812, 1966, 2437
Ppu21I	YACGTR	1 cut(s)	1613
PpuMI	RGGWCCY	1 cut(s)	2410
PsiI	TTATAA	1 cut(s)	1532
Psp5II	RGGWCCY	1 cut(s)	2410
Psp6I	CCWGG	2 cut(s)	1158, 2190
PspFI	CCCAGC	2 cut(s)	252, 1668
PspGI	CCWGG	2 cut(s)	1158, 2190
PspN4I	GGNNCC	3 cut(s)	80, 1142, 1713
PspPI	GGNCC	4 cut(s)	1141, 1165, 2275, 2410
PspPPI	RGGWCCY	1 cut(s)	2410
PspXI	VCTCGAGB	1 cut(s)	869
PstNI	CAGNNNCTG	2 cut(s)	959, 2222
PsuI	RGATCY	4 cut(s)	499, 1627, 1711, 2146
RsaI	GTAC	4 cut(s)	1349, 1588, 2369, 2446
RsaNI	GTAC	4 cut(s)	1348, 1587, 2368, 2445
RseI	CAYNNNNRTG	2 cut(s)	225, 1427
SaqAI	TTAA	7 cut(s)	390, 660, 897, 1038, 1482, 1925, 2253
SatI	GCNGC	7 cut(s)	455, 980, 1360, 1559, 1811, 1965, 2436
Sau96I	GGNCC	4 cut(s)	1141, 1165, 2275, 2410
ScaI	AGTACT	1 cut(s)	2369
ScrFI	CCNGG	6 cut(s)	590, 1133, 1145, 1160, 1815, 2192
SduI	GDGCHC	4 cut(s)	754, 870, 1612, 2122
SfaNI	GCATC	5 cut(s)	145, 1171, 1489, 1655, 1797
SfcI	CTRYAG	3 cut(s)	1256, 1503, 2475
Sfr274I	CTCGAG	1 cut(s)	869
SinI	GGWCC	2 cut(s)	1165, 2410
SlaI	CTCGAG	1 cut(s)	869
SmiMI	CAYNNNNRTG	2 cut(s)	225, 1427
SmlI	CTYRAG	3 cut(s)	174, 646, 869
SmoI	CTYRAG	3 cut(s)	174, 646, 869
SphI	GCATGC	1 cut(s)	1426
SsiI	CCGC	7 cut(s)	83, 101, 1360, 1467, 1558, 2435, 2450
SspMI	CTAG	3 cut(s)	119, 798, 2439
StyD4I	CCNGG	6 cut(s)	588, 1131, 1143, 1158, 1813, 2190
StyI	CCWWGG	3 cut(s)	292, 1363, 1487
TaaI	ACNGT	7 cut(s)	97, 889, 1006, 1189, 1260, 1554, 2476
TaiI	ACGT	2 cut(s)	1615, 2018
TaqI	TCGA	6 cut(s)	8, 520, 848, 870, 1477, 1774
TatI	WGTACW	3 cut(s)	1347, 1586, 2367
TauI	GCSGC	3 cut(s)	1362, 1561, 2438
Tru1I	TTAA	7 cut(s)	390, 660, 897, 1038, 1482, 1925, 2253
Tru9I	TTAA	7 cut(s)	390, 660, 897, 1038, 1482, 1925, 2253
TscAI	CASTG	4 cut(s)	1194, 1239, 1320, 2083
TseI	GCWGC	4 cut(s)	454, 979, 1810, 1964
TspDTI	ATGAA	4 cut(s)	602, 609, 1343, 2321
TspRI	CASTG	4 cut(s)	1194, 1239, 1320, 2083
Van91I	CCANNNNNTGG	1 cut(s)	2156
VpaK11BI	GGWCC	2 cut(s)	1165, 2410
XapI	RAATTY	3 cut(s)	431, 760, 1717
XceI	RCATGY	3 cut(s)	484, 1426, 1644
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2371
XhoI	CTCGAG	1 cut(s)	869
XmnI	GAANNNNTTC	4 cut(s)	77, 422, 1729, 2199
XspI	CTAG	3 cut(s)	119, 798, 2439
ZrmI	AGTACT	1 cut(s)	2369

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.