Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0003712

Physical Location & Seq

Genomic Coordinates Forward (+)

9433816 .. 9435912

Gene Structure 2097 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0120700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGTTTTAACAACCCTTCCTATCTCCATCTCTCCCGCCATAACTGTAATACCCCAATTCCCACAAAACCCTAAAACCCTAATCCTCCACCGATGCAAAACCACCAGAGACCTCAACCAAGTCCACGCCCATCTCATCAAAACCCGCCTCCTCCTCAACCCAGCCATCACCGAAAACCTCCTCGAATCCGCCGCATTGATTCTCCCCAATGCCATGGACTATGCTCTCTCCATTTTCGACGATCTCGAACAACCCGATTCCTTGGCTTATAACATCATCATCAGAAGCCTCACGTTCAAGCAGTCCCCTCTTAATGCCATTGTTCTGTTCAACAAAATGGTCGAAAACTCTGTCCAACCCGATGAGTTCACTTTTTCGAGTGTGCTGAAAGCTTGTTCTAGAGTAAGGGCATTGGGGGAAGGAGAGCAGGTCCATGCCCACATTGTGAAATGTGGGTTCAAGTCAAATGGGTTCGTTGTGAACACTTTGATTCACATGTATGCGACTTGTGGTGAGCTTGAGGTTGCCCGCCAGGTGTTCGATGGATTGCCTGAGAGAAATGTTATGGCTTGGAATTCAATGCTGGCCGGTTACGTGAAGAATGAGCGTTGGGACGAGGTTGTGGAGCTGTTTCGTAAAATGTTGGAGTCGGATATTGGGTTTGATGAGGTTACATTGATCAGTGTTTTGACAGCGTGTGGGAGAGTGGCGAATTTGGAACTGGGAGAGTGGATTGGTGGGTATATAGAGGCAAATGGGTTGAAGGGTAACATTGCTTTGGTTACTTCTCTGGTTGATATGTATGCAAAATGTGGTCAAGTGGATAAAGCAAGACGAATATTTGATGGAATGGACATGAGAGATGTTGTTGCGTGGAGCGCGATGATTTCTGGTTATGGTCAAGCAAATAGATGCAGGGAGGCGCTTGATCTGTTTCACGACATGCAAAAGGCAAATGTAGATCCTAATGAGGTTACAATGGTTAGTGTGCTGTACTCCTGTGGTGTTCTTGGAGCTTTGGATACTGGTAAATGGGTTGACTTTTATGTAAAGAAGAAGAAAATGAAGCTTACTGTTACCCTCGGAACTGCATTGATAGATTTCTATGCAAAATGTGGTTGTGTGGATGATTCAGTTGAAGTGTTTAATAGAATGCCTTCAGTAAACGTCTTCTCGTGGACAGCACTAATTCAAGGACTCGCTAGTAACGGACAGGGGAAAAGGGCTCTTGAGTACTTCAAATTGATGCAGGAGAAGAACATCAAACCAAATTATGTGACTTTTATTGCGGTTCTTTCTGCTTGTAGTCATGCAGGTTTGGTTGACGAGGGTCGAAATCTTTTTGTCAGCATGAACAATGATTTTGGAATTGAACCAAGGATTGAGCACTACGGTTCTATGGTTGATATCTTGGGTCGAGCTGGGTTGATTGAAGAGGCATATCAGTTCATCAGGAACATGCCTATCCAACCCAATGCTGTTGTTTGGAGGACATTATTGGCTTCATGCAGAGCAAAGAAAAATGTTGAAATTGGCGAAGAAGCATTGCAACAGATAATCAGATTGGAGACCCCTCATAGCGGTGACTACATACTTCTGTCCAACATTTATGCATCTGCTGGTAGGCGCGAGGACGCTCTTAGAGTGAGAAATCAAATGAAAGAGGAGAGAATAGAGAAGGTGGCTCCTGGATGTAGCGTGATTCAGTTGGATGGAACGATTTATGAGTTCTTTGCAGAGAACAAGGTATATCCACACTCCGAGGAGGTTCACAATGCTACTCATGACATGATGAAACAGATCGAGGCAGCTGGTTATGTGCCCAACACAGCAGATGGAAGACTAGATGCAGAAGAAGATGATATGCAGCAAGCTTCAGTTTCTCACCACAGTGAGAAGTTGGCCATTGCATTTGGTCTTATCAGAACACGTCCTGGAACGACACTTAGAATATCGAAAAATCTTCGAGTTTGTATGGACTGCCACAATGCAACGAAGATAATATCAAAGGTTTTTAACAGAGAAATTATTGTTAGGGACTGGAACCGCTTCCATCATTTCAAAGAAGGGTCATGTTCCTGCAATGACTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

698

Amino Acids

78.36

Weight (kDa)

6.1

Isoelectric Point (pI)

40.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	85 - 133	1.7e-10	PPR repeat family
PPR_2	PF13041	186 - 234	1.1e-08	PPR repeat family
PPR	PF01535	190 - 219	1.5e-07	PPR repeat
PPR_2	PF13041	287 - 332	1e-11	PPR repeat family
PPR	PF01535	290 - 319	8.6e-08	PPR repeat
PPR_3	PF13812	388 - 435	1.7e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	389 - 436	2.2e-10	PPR repeat family
PPR	PF01535	391 - 421	1.5e-06	PPR repeat
E_motif	PF20431	508 - 569	2.7e-18	E motif
DYW_deaminase	PF14432	605 - 698	1.3e-36	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17770 AT4G17770
fragaria_vesca	FvH4_5g22550 FvH4_5g22550 FvH4_5g22550 FvH4_5g22550 FvH4_5g22550 FvH4_5g22550
malus_domestica	MD06G1037500.v1.1
prunus_persica	Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1 Prupe.5G031500_v2.0.a1
pyrus_communis	pycom06g03100
rosa_chinensis	RchiOBHm_Chr7g0210321
rosa_laevigata	RLG00000003046
rosa_multiflora	Rmu_sc0004503.1_g000003 Rmu_sc0017069.1_g000008
rosa_roxburghii	Rroxscaffold_3G00248400
rosa_rugosa	Rorug07G0120600 Rorug07G0120700 Rorug07G0120800 Rorug07G0120800 Rorug07G0120900 Rorug07G0121000 Rorug07G0121000 Rorug07G0121000
rosa_samantha	Rh7BG248600
rosa_wichuraiana	Rw7G021630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	270
Acc36I	ACCTGC	2 cut(s)	418, 1304
AccII	CGCG	2 cut(s)	881, 1629
AciI	CCGC	8 cut(s)	36, 145, 189, 192, 529, 1289, 1581, 2047
AclWI	GGATC	1 cut(s)	956
AcoI	YGGCCR	2 cut(s)	585, 1902
AcsI	RAATTY	2 cut(s)	574, 712
AcuI	CTGAAG	2 cut(s)	1143, 1860
AdeI	CACNNNGTG	1 cut(s)	445
AfaI	GTAC	2 cut(s)	995, 1235
AfiI	CCNNNNNNNGG	1 cut(s)	1580
AflIII	ACRYGT	2 cut(s)	495, 1928
AjiI	CACGTC	1 cut(s)	1931
AjnI	CCWGG	3 cut(s)	531, 1687, 1933
AleI	CACNNNNGTG	1 cut(s)	1890
AluBI	AGCT	8 cut(s)	392, 517, 628, 1016, 1069, 1421, 1811, 1874
AluI	AGCT	8 cut(s)	392, 517, 628, 1016, 1069, 1421, 1811, 1874
Alw21I	GWGCWC	1 cut(s)	1389
Alw26I	GTCTC	2 cut(s)	102, 1562
AlwI	GGATC	1 cut(s)	956
AoxI	GGCC	2 cut(s)	585, 1902
ApeKI	GCWGC	2 cut(s)	1808, 1867
ApoI	RAATTY	2 cut(s)	574, 712
ArsI	GACNNNNNNTTYG	2 cut(s)	336, 368
Asp700I	GAANNNNTTC	2 cut(s)	1156, 2048
AspLEI	GCGC	3 cut(s)	881, 925, 1629
AspS9I	GGNCC	1 cut(s)	430
AsuHPI	GGTGA	4 cut(s)	160, 524, 1595, 1877
AvaII	GGWCC	1 cut(s)	430
BaeGI	GKGCMC	1 cut(s)	1824
BalI	TGGCCA	1 cut(s)	1904
BanII	GRGCYC	1 cut(s)	1228
BauI	CACGAG	1 cut(s)	1174
BbsI	GAAGAC	2 cut(s)	1162, 1846
Bbv12I	GWGCWC	1 cut(s)	1389
BbvI	GCAGC	2 cut(s)	1820, 1879
BccI	CCATC	8 cut(s)	35, 138, 173, 536, 839, 1706, 1829, 2061
BciT130I	CCWGG	3 cut(s)	533, 1689, 1935
BciVI	GTATCC	1 cut(s)	1015
BclI	TGATCA	1 cut(s)	678
BcoDI	GTCTC	2 cut(s)	102, 1562
BfaI	CTAG	3 cut(s)	399, 1203, 1844
BfoI	RGCGCY	1 cut(s)	926
BfuAI	ACCTGC	2 cut(s)	418, 1304
BfuI	GTATCC	1 cut(s)	1015
BisI	GCNGC	3 cut(s)	192, 1809, 1868
BlsI	GCNGC	3 cut(s)	193, 1810, 1869
BmcAI	AGTACT	1 cut(s)	1235
Bme1390I	CCNGG	3 cut(s)	533, 1689, 1935
Bme18I	GGWCC	1 cut(s)	430
BmgBI	CACGTC	1 cut(s)	1931
BmgT120I	GGNCC	1 cut(s)	430
BmiI	GGNNCC	2 cut(s)	1686, 2045
BmrFI	CCNGG	3 cut(s)	533, 1689, 1935
BmrI	ACTGGG	1 cut(s)	731
BmsI	GCATC	5 cut(s)	83, 902, 1236, 1622, 1837
BmuI	ACTGGG	1 cut(s)	731
BoxI	GACNNNNGTC	1 cut(s)	1329
BpiI	GAAGAC	2 cut(s)	1162, 1846
BpuEI	CTTGAG	2 cut(s)	539, 1250
BsaAI	YACGTR	1 cut(s)	595
BsaI	GGTCTC	2 cut(s)	102, 1562
BsaJI	CCNNGG	5 cut(s)	213, 261, 1081, 1376, 1761
BsaXI	ACNNNNNCTCC	2 cut(s)	414, 444
Bsc4I	CCNNNNNNNGG	1 cut(s)	1580
Bse118I	RCCGGY	1 cut(s)	587
Bse1I	ACTGG	3 cut(s)	726, 1030, 2045
Bse3DI	GCAATG	4 cut(s)	771, 1544, 1905, 2089
BseBI	CCWGG	3 cut(s)	533, 1689, 1935
BseDI	CCNNGG	5 cut(s)	213, 261, 1081, 1376, 1761
BseGI	GGATG	3 cut(s)	1132, 1697, 1717
BseLI	CCNNNNNNNGG	1 cut(s)	1580
BseMI	GCAATG	4 cut(s)	771, 1544, 1905, 2089
BseMII	CTCAG	1 cut(s)	543
BseNI	ACTGG	3 cut(s)	726, 1030, 2045
BseRI	GAGGAG	5 cut(s)	140, 143, 170, 1679, 1778
BseSI	GKGCMC	1 cut(s)	1824
BseXI	GCAGC	2 cut(s)	1820, 1879
BseYI	CCCAGC	2 cut(s)	160, 1421
Bsh1236I	CGCG	2 cut(s)	881, 1629
BshFI	GGCC	2 cut(s)	587, 1904
BsiHKAI	GWGCWC	1 cut(s)	1389
BsiSI	CCGG	1 cut(s)	588
BslFI	GGGAC	3 cut(s)	289, 626, 2051
BslI	CCNNNNNNNGG	1 cut(s)	1580
BsmAI	GTCTC	2 cut(s)	102, 1562
BsmFI	GGGAC	3 cut(s)	289, 626, 2051
BsmI	GAATGC	1 cut(s)	1158
BsnI	GGCC	2 cut(s)	587, 1904
Bso31I	GGTCTC	2 cut(s)	102, 1562
Bsp1286I	GDGCHC	3 cut(s)	1228, 1389, 1824
Bsp143I	GATC	5 cut(s)	241, 678, 928, 961, 1800
Bsp19I	CCATGG	1 cut(s)	213
BspACI	CCGC	8 cut(s)	36, 145, 189, 192, 529, 1289, 1581, 2047
BspANI	GGCC	2 cut(s)	587, 1904
BspCNI	CTCAG	1 cut(s)	544
BspFNI	CGCG	2 cut(s)	881, 1629
BspHI	TCATGA	1 cut(s)	1783
BspLI	GGNNCC	2 cut(s)	1686, 2045
BspMI	ACCTGC	2 cut(s)	418, 1304
BspPI	GGATC	1 cut(s)	956
BspTNI	GGTCTC	2 cut(s)	102, 1562
BsrDI	GCAATG	4 cut(s)	771, 1544, 1905, 2089
BsrFI	RCCGGY	1 cut(s)	587
BsrI	ACTGG	3 cut(s)	726, 1030, 2045
BssAI	RCCGGY	1 cut(s)	587
BssECI	CCNNGG	5 cut(s)	213, 261, 1081, 1376, 1761
BssMI	GATC	5 cut(s)	241, 678, 928, 961, 1800
BssSI	CACGAG	1 cut(s)	1174
BssT1I	CCWWGG	3 cut(s)	213, 261, 1376
Bst2BI	CACGAG	1 cut(s)	1174
Bst2UI	CCWGG	3 cut(s)	533, 1689, 1935
Bst4CI	ACNGT	4 cut(s)	46, 1075, 1394, 1892
Bst6I	CTCTTC	1 cut(s)	1428
BstBAI	YACGTR	1 cut(s)	595
BstC8I	GCNNGC	3 cut(s)	529, 585, 1872
BstDEI	CTNAG	3 cut(s)	552, 1640, 1946
BstDSI	CCRYGG	1 cut(s)	213
BstF5I	GGATG	3 cut(s)	1132, 1697, 1717
BstFNI	CGCG	2 cut(s)	881, 1629
BstH2I	RGCGCY	1 cut(s)	926
BstHHI	GCGC	3 cut(s)	881, 925, 1629
BstKTI	GATC	5 cut(s)	244, 681, 931, 964, 1803
BstMAI	GTCTC	2 cut(s)	102, 1562
BstMBI	GATC	5 cut(s)	241, 678, 928, 961, 1800
BstMWI	GCNNNNNNNGC	1 cut(s)	878
BstNI	CCWGG	3 cut(s)	533, 1689, 1935
BstNSI	RCATGY	3 cut(s)	499, 946, 1462
BstPAI	GACNNNNGTC	1 cut(s)	1329
BstSCI	CCNGG	3 cut(s)	531, 1687, 1933
BstSLI	GKGCMC	1 cut(s)	1824
BstUI	CGCG	2 cut(s)	881, 1629
BstV1I	GCAGC	2 cut(s)	1820, 1879
BstV2I	GAAGAC	2 cut(s)	1162, 1846
BstX2I	RGATCY	1 cut(s)	961
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstYI	RGATCY	1 cut(s)	961
BsuI	GTATCC	1 cut(s)	1015
BsuRI	GGCC	2 cut(s)	587, 1904
BtgI	CCRYGG	1 cut(s)	213
BtgZI	GCGATG	1 cut(s)	896
BtrI	CACGTC	1 cut(s)	1931
BtsCI	GGATG	3 cut(s)	1132, 1697, 1717
BtsIMutI	CAGTG	2 cut(s)	688, 1897
BveI	ACCTGC	2 cut(s)	418, 1304
Cac8I	GCNNGC	3 cut(s)	529, 585, 1872
CciI	TCATGA	1 cut(s)	1783
CfoI	GCGC	3 cut(s)	881, 925, 1629
Cfr10I	RCCGGY	1 cut(s)	587
Cfr13I	GGNCC	1 cut(s)	430
CseI	GACGC	1 cut(s)	1643
Csp6I	GTAC	2 cut(s)	994, 1234
CviQI	GTAC	2 cut(s)	994, 1234
DdeI	CTNAG	3 cut(s)	552, 1640, 1946
DpnI	GATC	5 cut(s)	243, 680, 930, 963, 1802
DpnII	GATC	5 cut(s)	241, 678, 928, 961, 1800
DraIII	CACNNNGTG	1 cut(s)	445
EaeI	YGGCCR	2 cut(s)	585, 1902
Eam1104I	CTCTTC	1 cut(s)	1428
EarI	CTCTTC	1 cut(s)	1428
EciI	GGCGGA	1 cut(s)	178
Eco130I	CCWWGG	3 cut(s)	213, 261, 1376
Eco24I	GRGCYC	1 cut(s)	1228
Eco31I	GGTCTC	2 cut(s)	102, 1562
Eco32I	GATATC	1 cut(s)	1408
Eco47I	GGWCC	1 cut(s)	430
Eco57I	CTGAAG	2 cut(s)	1143, 1860
EcoRI	GAATTC	1 cut(s)	574
EcoRII	CCWGG	3 cut(s)	531, 1687, 1933
EcoRV	GATATC	1 cut(s)	1408
EcoT14I	CCWWGG	3 cut(s)	213, 261, 1376
EcoT22I	ATGCAT	1 cut(s)	1615
EcoT38I	GRGCYC	1 cut(s)	1228
ErhI	CCWWGG	3 cut(s)	213, 261, 1376
FaqI	GGGAC	3 cut(s)	289, 626, 2051
FauI	CCCGC	3 cut(s)	43, 152, 536
FbaI	TGATCA	1 cut(s)	678
Fnu4HI	GCNGC	3 cut(s)	192, 1809, 1868
FokI	GGATG	3 cut(s)	1139, 1704, 1724
FriOI	GRGCYC	1 cut(s)	1228
Fsp4HI	GCNGC	3 cut(s)	192, 1809, 1868
FspBI	CTAG	3 cut(s)	399, 1203, 1844
GlaI	GCGC	3 cut(s)	880, 924, 1628
GluI	GCNGC	3 cut(s)	192, 1809, 1868
GsaI	CCCAGC	2 cut(s)	164, 1425
HaeII	RGCGCY	1 cut(s)	926
HaeIII	GGCC	2 cut(s)	587, 1904
HapII	CCGG	1 cut(s)	588
HgaI	GACGC	1 cut(s)	1643
HhaI	GCGC	3 cut(s)	881, 925, 1629
Hin6I	GCGC	3 cut(s)	879, 923, 1627
HinP1I	GCGC	3 cut(s)	879, 923, 1627
HincII	GTYRAC	2 cut(s)	1039, 1324
HindII	GTYRAC	2 cut(s)	1039, 1324
HindIII	AAGCTT	3 cut(s)	390, 1067, 1872
HinfI	GANTC	8 cut(s)	185, 199, 257, 490, 647, 1130, 1197, 1702
HpaII	CCGG	1 cut(s)	588
HphI	GGTGA	4 cut(s)	160, 524, 1595, 1877
Hpy166II	GTNNAC	8 cut(s)	124, 369, 481, 1039, 1165, 1179, 1324, 1771
Hpy188I	TCNGA	6 cut(s)	284, 652, 1085, 1562, 1762, 1925
Hpy188III	TCNNGA	6 cut(s)	245, 399, 938, 1229, 1453, 1784
Hpy8I	GTNNAC	8 cut(s)	124, 369, 481, 1039, 1165, 1179, 1324, 1771
Hpy99I	CGWCG	1 cut(s)	242
HpyAV	CCTTC	6 cut(s)	26, 413, 757, 1167, 1672, 2060
HpyCH4III	ACNGT	4 cut(s)	46, 1075, 1394, 1892
HpyCH4IV	ACGT	4 cut(s)	293, 594, 1167, 1930
HpyF10VI	GCNNNNNNNGC	1 cut(s)	878
HpyF3I	CTNAG	3 cut(s)	552, 1640, 1946
HpySE526I	ACGT	4 cut(s)	293, 594, 1167, 1930
HspAI	GCGC	3 cut(s)	879, 923, 1627
Ksp22I	TGATCA	1 cut(s)	678
Kzo9I	GATC	5 cut(s)	241, 678, 928, 961, 1800
LmnI	GCTCC	4 cut(s)	625, 876, 1013, 1690
Lsp1109I	GCAGC	2 cut(s)	1820, 1879
LweI	GCATC	5 cut(s)	83, 902, 1236, 1622, 1837
MaeI	CTAG	3 cut(s)	399, 1203, 1844
MaeII	ACGT	4 cut(s)	293, 594, 1167, 1930
MaeIII	GTNAC	9 cut(s)	590, 670, 767, 781, 973, 1075, 1205, 1276, 1583
MalI	GATC	5 cut(s)	243, 680, 930, 963, 1802
MboI	GATC	5 cut(s)	241, 678, 928, 961, 1800
MflI	RGATCY	1 cut(s)	961
MhlI	GDGCHC	3 cut(s)	1228, 1389, 1824
MlsI	TGGCCA	1 cut(s)	1904
MluCI	AATT	9 cut(s)	56, 574, 712, 1188, 1241, 1270, 1368, 1530, 2025
MluNI	TGGCCA	1 cut(s)	1904
MlyI	GAGTC	2 cut(s)	656, 1191
MmeI	TCCRAC	6 cut(s)	379, 624, 630, 1492, 1626, 1689
Mox20I	TGGCCA	1 cut(s)	1904
Mph1103I	ATGCAT	1 cut(s)	1615
MroXI	GAANNNNTTC	2 cut(s)	1156, 2048
MscI	TGGCCA	1 cut(s)	1904
MseI	TTAA	4 cut(s)	8, 312, 1146, 2016
MslI	CAYNNNNRTG	3 cut(s)	498, 1581, 1890
Msp20I	TGGCCA	1 cut(s)	1904
MspA1I	CMGCKG	1 cut(s)	1811
MspI	CCGG	1 cut(s)	588
MspR9I	CCNGG	3 cut(s)	533, 1689, 1935
Mva1269I	GAATGC	1 cut(s)	1158
MvaI	CCWGG	3 cut(s)	533, 1689, 1935
MvnI	CGCG	2 cut(s)	881, 1629
MwoI	GCNNNNNNNGC	1 cut(s)	878
NcoI	CCATGG	1 cut(s)	213
NdeII	GATC	5 cut(s)	241, 678, 928, 961, 1800
NlaIV	GGNNCC	2 cut(s)	1686, 2045
NmuCI	GTSAC	2 cut(s)	1276, 1583
NsiI	ATGCAT	1 cut(s)	1615
NspI	RCATGY	3 cut(s)	499, 946, 1462
OliI	CACNNNNGTG	1 cut(s)	1890
PagI	TCATGA	1 cut(s)	1783
PciI	ACATGT	1 cut(s)	495
PcsI	WCGNNNNNNNCGW	2 cut(s)	243, 252
PctI	GAATGC	1 cut(s)	1158
PdmI	GAANNNNTTC	2 cut(s)	1156, 2048
PfeI	GAWTC	6 cut(s)	185, 199, 257, 490, 1130, 1702
PfoI	TCCNGGA	2 cut(s)	1687, 1933
PkrI	GCNGC	3 cut(s)	193, 1810, 1869
PleI	GAGTC	2 cut(s)	655, 1191
PpsI	GAGTC	2 cut(s)	655, 1191
Ppu21I	YACGTR	1 cut(s)	595
PscI	ACATGT	1 cut(s)	495
PshAI	GACNNNNGTC	1 cut(s)	1329
PsiI	TTATAA	1 cut(s)	270
Psp6I	CCWGG	3 cut(s)	531, 1687, 1933
PspFI	CCCAGC	2 cut(s)	160, 1421
PspGI	CCWGG	3 cut(s)	531, 1687, 1933
PspN4I	GGNNCC	2 cut(s)	1686, 2045
PspPI	GGNCC	1 cut(s)	430
PsuI	RGATCY	1 cut(s)	961
PvuII	CAGCTG	1 cut(s)	1811
RsaI	GTAC	2 cut(s)	995, 1235
RsaNI	GTAC	2 cut(s)	994, 1234
RseI	CAYNNNNRTG	3 cut(s)	498, 1581, 1890
SaqAI	TTAA	4 cut(s)	8, 312, 1146, 2016
SatI	GCNGC	3 cut(s)	192, 1809, 1868
Sau3AI	GATC	5 cut(s)	241, 678, 928, 961, 1800
Sau96I	GGNCC	1 cut(s)	430
ScaI	AGTACT	1 cut(s)	1235
SchI	GAGTC	2 cut(s)	656, 1191
ScrFI	CCNGG	3 cut(s)	533, 1689, 1935
SduI	GDGCHC	3 cut(s)	1228, 1389, 1824
SfaNI	GCATC	5 cut(s)	83, 902, 1236, 1622, 1837
SinI	GGWCC	1 cut(s)	430
SmiMI	CAYNNNNRTG	3 cut(s)	498, 1581, 1890
SmlI	CTYRAG	2 cut(s)	518, 1229
SmoI	CTYRAG	2 cut(s)	518, 1229
Sse9I	AATT	9 cut(s)	56, 574, 712, 1188, 1241, 1270, 1368, 1530, 2025
SsiI	CCGC	8 cut(s)	36, 145, 189, 192, 529, 1289, 1581, 2047
SspI	AATATT	1 cut(s)	840
SspMI	CTAG	3 cut(s)	399, 1203, 1844
StyD4I	CCNGG	3 cut(s)	531, 1687, 1933
StyI	CCWWGG	3 cut(s)	213, 261, 1376
TaaI	ACNGT	4 cut(s)	46, 1075, 1394, 1892
TaiI	ACGT	4 cut(s)	296, 597, 1170, 1933
TasI	AATT	9 cut(s)	56, 574, 712, 1188, 1241, 1270, 1368, 1530, 2025
TatI	WGTACW	2 cut(s)	993, 1233
TauI	GCSGC	1 cut(s)	194
TfiI	GAWTC	6 cut(s)	185, 199, 257, 490, 1130, 1702
Tru1I	TTAA	4 cut(s)	8, 312, 1146, 2016
Tru9I	TTAA	4 cut(s)	8, 312, 1146, 2016
TscAI	CASTG	2 cut(s)	688, 1897
TseFI	GTSAC	2 cut(s)	1276, 1583
TseI	GCWGC	2 cut(s)	1808, 1867
Tsp45I	GTSAC	2 cut(s)	1276, 1583
TspDTI	ATGAA	6 cut(s)	1079, 1367, 1438, 1494, 1673, 1808
TspGWI	ACGGA	1 cut(s)	1224
TspRI	CASTG	2 cut(s)	688, 1897
VpaK11BI	GGWCC	1 cut(s)	430
XapI	RAATTY	2 cut(s)	574, 712
XbaI	TCTAGA	1 cut(s)	398
XceI	RCATGY	3 cut(s)	499, 946, 1462
XcmI	CCANNNNNNNNNTGG	1 cut(s)	539
XmnI	GAANNNNTTC	2 cut(s)	1156, 2048
XspI	CTAG	3 cut(s)	399, 1203, 1844
ZrmI	AGTACT	1 cut(s)	1235
Zsp2I	ATGCAT	1 cut(s)	1615

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.