Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005354

Physical Location & Seq

Genomic Coordinates Forward (+)

49550131 .. 49556097

Gene Structure 5967 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003517

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGTGGGTTTTATCTGTAACACAGTTGGAGAGAAAGATGGGTGTCAAGAACAAGCAGGTGGGAAAAGAGAGAATGGAGATTCTGGGCCACGCTCAGATGTTCATACCCAACACAGGCGCTCCAAAAGTGCTTCTGACAAGAATTTTGGTATTCGAAGAGGTCGAGTTTTAAGTTCCACAAAGAAGGACAAGAATGAAACACAGGTTTCATCACCTTCAACAAGTGCGTCTACAGGACAAAGTCCTTGGCATGAAAATCCTATTTATTTTAACAAGAATATGTCATTGAACAACAGAGCGTCCTTGGAAAAAGATATCGAACAGCTGCAGTTGCGTTTGCAGGAAGAGAAATCTATGCGTAACATGCTTGAGAGGGCAATGGGCCGAGCTTCAAGTACTCTATCACCTGGACATAGACATTTCTCTGTCCAGACGAAGGAATTGATTTCTGAAATTGAATTACTTGAAGAAGAAGTTGCCAATCGCGAGCAGCATGTTCTCTCTCTCTATAGGAGTATTTTTGAACAGTGTGTTAGTAAGCCACCTTCGGAGCAGAACTCACTTGTTGCTTCCCCTGCTCATATGAAGAATGGATCCAGGAAACATCCCAGTATCATTTCAAGTGCATTTTGTTCTGCAAAAAATTTTCCTTTCCGACATTTCAGAGCTCTAGTTGCCATAGATGACTCGGGAAAAAGAACTTCCAAGACTAGTCATACTCCAATATCTAGTGGCAAAAGTGACATTGATTTTGCAAAGACTCGTTCAAACCTTTCTAAGGTAGAAAAGGTTCGTGAAAGGGTTCCAGTCCTGGAGAAAACTTCCATGCTGCGAACTCTGAAAGATCATCTCCACCAGTGCCCTAGCAAGTTAGCTGAGGAAATGGTCAGGTGTATGTCTATAGTTTATTGTTGGCTTTGCAGTGCAGCCTCTGAGAAGATTGAGAAAAAACAATCGCCTTTGCTGTCGAGGTCATCCACTAATGTTTTACAGCCTCCACATGGTACTGAAGATGCCCAAGATTGGTCTGGCAAATCAATGGTAGAAATATCTTGGATATCAACCGATAAGAGAAAGTCTTCTCATGCTTCTTATGCCATTAATAACTATAGAATGTTGGTCGAGCAACTGGAGAAGGTGGATGTCACTCAGATGGAATTGGATGCCCAAATTGCATTTTGGATCAACGTTTACAATGCGCTGCTTATGCATGCATATTTAGCATATGGAATTCCCAACAGCTCTTTAAGAAGGTTGGCCTTGTTCCATAAGGCTGCTTACAACATTGGGGGCCTTGTCATCAGCGCAAATGCCATAGAGCAATCCATATTTGGCTTCCAAACACCCAGGATTGGACGGTGGCTTGAAACATTCCTTTCAACTGCCTTGAGGAAGAAGTTTGGGGAAGACAGACAGCTTCGCAATTCAAAATTGGGTCTCCCAGTTTCCGAACCCCTTGTTTGCTTTGCTCTTTGTACCGGAGCTTTTTCGGATCCTGCGTTGAAAGTCTACACAGCCTCAAATGTTAGAGATGAGCTTGAAGAAGCAAAGAAAGATTTCATCAAAGCAAATGTAGTGGTAAAGAAGTCGAGGAAAGTTTTTCTACCAAAGATGCTTGAAAGATTTTCGAGGGAAGCGTCTTTTGGCTCTGATGATCTTCTCAAATGGGTCACTGACAATGTTGATGAGAAGCTTCAGGATTCAATTAGAAAATGCATTGATCATAAATCCAGCAAGAAGGCATCTCAAATCATAGAGTGGTTGCCTTACAATTCAAGGTTCCGATACGTGTTCCCAAAGGATCTAGCAGAGAAGCCATGGTGGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 Lzipper-MIP1

Protein Analysis

610

Amino Acids

69.03

Weight (kDa)

9.41

Isoelectric Point (pI)

51.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	97 - 176	1.2e-20	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	383 - 521	7.4e-37	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0005354)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47380 AT5G47380 AT5G47380 AT5G47380 AT5G47380
fragaria_vesca	FvH4_5g19100 FvH4_5g19100 FvH4_5g19100 FvH4_5g19100 FvH4_5g19100
malus_domestica	MD06G1057000.v1.1
prunus_persica	Prupe.5G067800_v2.0.a1 Prupe.5G067800_v2.0.a1
pyrus_communis	pycom06g04760
rosa_chinensis	RchiOBHm_Chr7g0203571
rosa_laevigata	RLG00000003517
rosa_multiflora	Rmu_sc0007757.1_g000001 Rmu_sc0017396.1_g000001
rosa_roxburghii	Rroxscaffold_3G00253670 Rroxscaffold_3G00253710
rosa_rugosa	Rorug07G0077000 Rorug07G0077100 Rorug07G0077100 Rorug07G0077200
rosa_samantha	Rh7AG206800 Rh7BG206300 Rh7CG219400 Rh7DG214000
rosa_wichuraiana	Rw7G018040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	47
Acc36I	ACCTGC	1 cut(s)	47
AccI	GTMKAC	2 cut(s)	230, 1509
AccII	CGCG	1 cut(s)	486
AclI	AACGTT	1 cut(s)	1188
AclWI	GGATC	6 cut(s)	588, 601, 1190, 1487, 1500, 1809
AcsI	RAATTY	3 cut(s)	142, 643, 1230
AcuI	CTGAAG	2 cut(s)	1029, 1679
AfaI	GTAC	3 cut(s)	397, 1006, 1477
AfiI	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 1001, 1023, 1352
AflIII	ACRYGT	1 cut(s)	1788
AhlI	ACTAGT	1 cut(s)	710
AjnI	CCWGG	4 cut(s)	406, 596, 810, 1346
AjuI	GAANNNNNNNTTGG	2 cut(s)	1626, 1658
AluBI	AGCT	9 cut(s)	325, 389, 668, 875, 1242, 1417, 1484, 1537, 1693
AluI	AGCT	9 cut(s)	325, 389, 668, 875, 1242, 1417, 1484, 1537, 1693
Alw21I	GWGCWC	1 cut(s)	670
Alw26I	GTCTC	1 cut(s)	1442
AlwI	GGATC	6 cut(s)	588, 601, 1190, 1487, 1500, 1809
AlwNI	CAGNNNCTG	1 cut(s)	932
Ama87I	CYCGRG	1 cut(s)	688
AoxI	GGCC	4 cut(s)	86, 382, 1257, 1291
ApeKI	GCWGC	6 cut(s)	325, 490, 829, 926, 1201, 1274
ApoI	RAATTY	3 cut(s)	142, 643, 1230
ArsI	GACNNNNNNTTYG	4 cut(s)	128, 160, 734, 766
AseI	ATTAAT	1 cut(s)	1101
Asp700I	GAANNNNTTC	4 cut(s)	789, 801, 1078, 1556
AspLEI	GCGC	3 cut(s)	120, 1201, 1307
AspS9I	GGNCC	3 cut(s)	86, 382, 1291
AsuHPI	GGTGA	2 cut(s)	204, 396
AsuII	TTCGAA	1 cut(s)	154
AvaI	CYCGRG	1 cut(s)	688
BaeGI	GKGCMC	1 cut(s)	863
BamHI	GGATCC	2 cut(s)	593, 1492
BanII	GRGCYC	1 cut(s)	670
BarI	GAAGNNNNNNTAC	2 cut(s)	529, 561
BbsI	GAAGAC	2 cut(s)	1071, 1413
Bbv12I	GWGCWC	1 cut(s)	670
BbvCI	CCTCAGC	1 cut(s)	876
BbvI	GCAGC	6 cut(s)	312, 502, 816, 938, 1188, 1261
BccI	CCATC	2 cut(s)	32, 1147
BciT130I	CCWGG	4 cut(s)	408, 598, 812, 1348
BclI	TGATCA	1 cut(s)	1720
BcoDI	GTCTC	1 cut(s)	1442
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	5 cut(s)	671, 711, 729, 864, 1805
BfmI	CTRYAG	5 cut(s)	231, 326, 508, 900, 1108
BfoI	RGCGCY	1 cut(s)	121
BfuAI	ACCTGC	1 cut(s)	47
BisI	GCNGC	6 cut(s)	326, 491, 830, 927, 1202, 1275
BlsI	GCNGC	6 cut(s)	327, 492, 831, 928, 1203, 1276
BmcAI	AGTACT	1 cut(s)	397
Bme1390I	CCNGG	4 cut(s)	408, 598, 812, 1348
BmeT110I	CYCGRG	1 cut(s)	688
BmgT120I	GGNCC	3 cut(s)	86, 382, 1291
BmiI	GGNNCC	5 cut(s)	595, 804, 1292, 1494, 1781
BmrFI	CCNGG	4 cut(s)	408, 598, 812, 1348
BmrI	ACTGGG	2 cut(s)	603, 1436
BmsI	GCATC	4 cut(s)	1003, 1153, 1602, 1751
BmuI	ACTGGG	2 cut(s)	603, 1436
BpiI	GAAGAC	2 cut(s)	1071, 1413
BplI	GAGNNNNNCTC	2 cut(s)	542, 574
BpmI	CTGGAG	2 cut(s)	833, 1151
Bpu10I	CCTNAGC	1 cut(s)	876
Bpu14I	TTCGAA	1 cut(s)	154
BpuEI	CTTGAG	2 cut(s)	389, 1408
BsaAI	YACGTR	1 cut(s)	1789
BsaI	GGTCTC	1 cut(s)	1442
BsaJI	CCNNGG	4 cut(s)	245, 303, 1346, 1817
BsaWI	WCCGGW	1 cut(s)	1478
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 1001, 1023, 1352
Bse1I	ACTGG	5 cut(s)	609, 806, 856, 1134, 1442
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	4 cut(s)	408, 598, 812, 1348
BseDI	CCNNGG	4 cut(s)	245, 303, 1346, 1817
BseGI	GGATG	4 cut(s)	604, 974, 1147, 1168
BseLI	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 1001, 1023, 1352
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	4 cut(s)	108, 867, 924, 1163
BseNI	ACTGG	5 cut(s)	609, 806, 856, 1134, 1442
BseSI	GKGCMC	1 cut(s)	863
BseXI	GCAGC	6 cut(s)	312, 502, 816, 938, 1188, 1261
BsgI	GTGCAG	1 cut(s)	945
Bsh1236I	CGCG	1 cut(s)	486
BshFI	GGCC	4 cut(s)	88, 384, 1259, 1293
BsiHKAI	GWGCWC	1 cut(s)	670
BsiHKCI	CYCGRG	1 cut(s)	688
BsiSI	CCGG	1 cut(s)	1479
BslI	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 1001, 1023, 1352
BsmAI	GTCTC	1 cut(s)	1442
BsnI	GGCC	4 cut(s)	88, 384, 1259, 1293
Bso31I	GGTCTC	1 cut(s)	1442
BsoBI	CYCGRG	1 cut(s)	688
Bsp119I	TTCGAA	1 cut(s)	154
Bsp1286I	GDGCHC	2 cut(s)	670, 863
Bsp143I	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
Bsp19I	CCATGG	1 cut(s)	1817
Bsp68I	TCGCGA	1 cut(s)	486
BspANI	GGCC	4 cut(s)	88, 384, 1259, 1293
BspCNI	CTCAG	4 cut(s)	107, 868, 925, 1162
BspFNI	CGCG	1 cut(s)	486
BspLI	GGNNCC	5 cut(s)	595, 804, 1292, 1494, 1781
BspMAI	CTGCAG	1 cut(s)	330
BspMI	ACCTGC	1 cut(s)	47
BspPI	GGATC	6 cut(s)	588, 601, 1190, 1487, 1500, 1809
BspT104I	TTCGAA	1 cut(s)	154
BspTNI	GGTCTC	1 cut(s)	1442
BsrDI	GCAATG	1 cut(s)	384
BsrI	ACTGG	5 cut(s)	609, 806, 856, 1134, 1442
BssECI	CCNNGG	4 cut(s)	245, 303, 1346, 1817
BssMI	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
BssT1I	CCWWGG	3 cut(s)	245, 303, 1817
Bst2UI	CCWGG	4 cut(s)	408, 598, 812, 1348
Bst4CI	ACNGT	3 cut(s)	25, 528, 1359
Bst6I	CTCTTC	2 cut(s)	151, 339
BstBAI	YACGTR	1 cut(s)	1789
BstBI	TTCGAA	1 cut(s)	154
BstC8I	GCNNGC	2 cut(s)	488, 1212
BstDEI	CTNAG	5 cut(s)	94, 777, 876, 933, 1149
BstDSI	CCRYGG	1 cut(s)	1817
BstENI	CCTNNNNNAGG	1 cut(s)	776
BstF5I	GGATG	4 cut(s)	604, 974, 1147, 1168
BstFNI	CGCG	1 cut(s)	486
BstH2I	RGCGCY	1 cut(s)	121
BstHHI	GCGC	3 cut(s)	120, 1201, 1307
BstKTI	GATC	7 cut(s)	596, 847, 1185, 1495, 1657, 1723, 1804
BstMAI	GTCTC	1 cut(s)	1442
BstMBI	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
BstMWI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1094, 1172, 1207, 1220
BstNI	CCWGG	4 cut(s)	408, 598, 812, 1348
BstNSI	RCATGY	3 cut(s)	367, 497, 1214
BstSCI	CCNGG	4 cut(s)	406, 596, 810, 1346
BstSFI	CTRYAG	5 cut(s)	231, 326, 508, 900, 1108
BstSLI	GKGCMC	1 cut(s)	863
BstUI	CGCG	1 cut(s)	486
BstV1I	GCAGC	6 cut(s)	312, 502, 816, 938, 1188, 1261
BstV2I	GAAGAC	2 cut(s)	1071, 1413
BstX2I	RGATCY	3 cut(s)	593, 1492, 1801
BstYI	RGATCY	3 cut(s)	593, 1492, 1801
BsuRI	GGCC	4 cut(s)	88, 384, 1259, 1293
BtgI	CCRYGG	1 cut(s)	1817
BtsCI	GGATG	4 cut(s)	604, 974, 1147, 1168
BtsI	GCAGTG	1 cut(s)	928
BtsIMutI	CAGTG	4 cut(s)	533, 863, 928, 1671
BtuMI	TCGCGA	1 cut(s)	486
BveI	ACCTGC	1 cut(s)	47
Cac8I	GCNNGC	2 cut(s)	488, 1212
CaiI	CAGNNNCTG	1 cut(s)	932
CfoI	GCGC	3 cut(s)	120, 1201, 1307
Cfr13I	GGNCC	3 cut(s)	86, 382, 1291
CseI	GACGC	3 cut(s)	216, 288, 1626
Csp6I	GTAC	3 cut(s)	396, 1005, 1476
CspCI	CAANNNNNGTGG	2 cut(s)	1557, 1592
CviAII	CATG	8 cut(s)	251, 364, 494, 826, 1001, 1085, 1211, 1818
CviQI	GTAC	3 cut(s)	396, 1005, 1476
DdeI	CTNAG	5 cut(s)	94, 777, 876, 933, 1149
DpnI	GATC	7 cut(s)	595, 846, 1184, 1494, 1656, 1722, 1803
DpnII	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
Eam1104I	CTCTTC	2 cut(s)	151, 339
EarI	CTCTTC	2 cut(s)	151, 339
Ecl136II	GAGCTC	1 cut(s)	668
Eco130I	CCWWGG	3 cut(s)	245, 303, 1817
Eco24I	GRGCYC	1 cut(s)	670
Eco31I	GGTCTC	1 cut(s)	1442
Eco32I	GATATC	2 cut(s)	316, 1059
Eco53kI	GAGCTC	1 cut(s)	668
Eco57I	CTGAAG	2 cut(s)	1029, 1679
Eco88I	CYCGRG	1 cut(s)	688
EcoICRI	GAGCTC	1 cut(s)	668
EcoNI	CCTNNNNNAGG	1 cut(s)	776
EcoO109I	RGGNCCY	1 cut(s)	1291
EcoRI	GAATTC	1 cut(s)	1230
EcoRII	CCWGG	4 cut(s)	406, 596, 810, 1346
EcoRV	GATATC	2 cut(s)	316, 1059
EcoT14I	CCWWGG	3 cut(s)	245, 303, 1817
EcoT22I	ATGCAT	3 cut(s)	1212, 1216, 1718
EcoT38I	GRGCYC	1 cut(s)	670
ErhI	CCWWGG	3 cut(s)	245, 303, 1817
FaeI	CATG	8 cut(s)	254, 367, 497, 829, 1004, 1088, 1214, 1821
FatI	CATG	8 cut(s)	250, 363, 493, 825, 1000, 1084, 1210, 1817
FauNDI	CATATG	2 cut(s)	582, 1225
FbaI	TGATCA	1 cut(s)	1720
FblI	GTMKAC	2 cut(s)	230, 1509
Fnu4HI	GCNGC	6 cut(s)	326, 491, 830, 927, 1202, 1275
FokI	GGATG	4 cut(s)	591, 961, 1154, 1175
FriOI	GRGCYC	1 cut(s)	670
Fsp4HI	GCNGC	6 cut(s)	326, 491, 830, 927, 1202, 1275
FspBI	CTAG	5 cut(s)	671, 711, 729, 864, 1805
GlaI	GCGC	3 cut(s)	119, 1200, 1306
GluI	GCNGC	6 cut(s)	326, 491, 830, 927, 1202, 1275
GsuI	CTGGAG	2 cut(s)	833, 1151
HaeII	RGCGCY	1 cut(s)	121
HaeIII	GGCC	4 cut(s)	88, 384, 1259, 1293
HapII	CCGG	1 cut(s)	1479
HgaI	GACGC	3 cut(s)	216, 288, 1626
HhaI	GCGC	3 cut(s)	120, 1201, 1307
Hin1II	CATG	8 cut(s)	254, 367, 497, 829, 1004, 1088, 1214, 1821
Hin6I	GCGC	3 cut(s)	118, 1199, 1305
HinP1I	GCGC	3 cut(s)	118, 1199, 1305
HindIII	AAGCTT	1 cut(s)	1691
HinfI	GANTC	4 cut(s)	80, 686, 760, 1700
HpaII	CCGG	1 cut(s)	1479
HphI	GGTGA	2 cut(s)	204, 396
Hpy166II	GTNNAC	3 cut(s)	231, 1192, 1510
Hpy188III	TCNNGA	6 cut(s)	47, 430, 485, 690, 794, 1697
Hpy8I	GTNNAC	3 cut(s)	231, 1192, 1510
HpyAV	CCTTC	7 cut(s)	178, 225, 430, 555, 1129, 1245, 1732
HpyCH4III	ACNGT	3 cut(s)	25, 528, 1359
HpyCH4IV	ACGT	2 cut(s)	1188, 1788
HpyF10VI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1094, 1172, 1207, 1220
HpyF3I	CTNAG	5 cut(s)	94, 777, 876, 933, 1149
HpySE526I	ACGT	2 cut(s)	1188, 1788
Hsp92II	CATG	8 cut(s)	254, 367, 497, 829, 1004, 1088, 1214, 1821
HspAI	GCGC	3 cut(s)	118, 1199, 1305
Ksp22I	TGATCA	1 cut(s)	1720
Kzo9I	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
LmnI	GCTCC	3 cut(s)	125, 550, 1481
Lsp1109I	GCAGC	6 cut(s)	312, 502, 816, 938, 1188, 1261
LweI	GCATC	4 cut(s)	1003, 1153, 1602, 1751
MaeI	CTAG	5 cut(s)	671, 711, 729, 864, 1805
MaeII	ACGT	2 cut(s)	1188, 1788
MaeIII	GTNAC	5 cut(s)	17, 359, 740, 1144, 1669
MalI	GATC	7 cut(s)	595, 846, 1184, 1494, 1656, 1722, 1803
MboI	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
MflI	RGATCY	3 cut(s)	593, 1492, 1801
MhlI	GDGCHC	2 cut(s)	670, 863
MlyI	GAGTC	2 cut(s)	680, 754
MmeI	TCCRAC	2 cut(s)	7, 679
Mph1103I	ATGCAT	3 cut(s)	1212, 1216, 1718
MroXI	GAANNNNTTC	4 cut(s)	789, 801, 1078, 1556
MseI	TTAA	4 cut(s)	170, 270, 1101, 1247
MslI	CAYNNNNRTG	1 cut(s)	1151
MspA1I	CMGCKG	1 cut(s)	325
MspI	CCGG	1 cut(s)	1479
MspR9I	CCNGG	4 cut(s)	408, 598, 812, 1348
MvaI	CCWGG	4 cut(s)	408, 598, 812, 1348
MvnI	CGCG	1 cut(s)	486
MwoI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1094, 1172, 1207, 1220
NcoI	CCATGG	1 cut(s)	1817
NdeI	CATATG	2 cut(s)	582, 1225
NdeII	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
NlaIII	CATG	8 cut(s)	254, 367, 497, 829, 1004, 1088, 1214, 1821
NlaIV	GGNNCC	5 cut(s)	595, 804, 1292, 1494, 1781
NmeAIII	GCCGAG	1 cut(s)	410
NmuCI	GTSAC	3 cut(s)	740, 1144, 1669
NruI	TCGCGA	1 cut(s)	486
NsiI	ATGCAT	3 cut(s)	1212, 1216, 1718
NspI	RCATGY	3 cut(s)	367, 497, 1214
NspV	TTCGAA	1 cut(s)	154
PaeI	GCATGC	1 cut(s)	1214
PaqCI	CACCTGC	1 cut(s)	47
PcsI	WCGNNNNNNNCGW	3 cut(s)	160, 1496, 1634
PdmI	GAANNNNTTC	4 cut(s)	789, 801, 1078, 1556
PfeI	GAWTC	2 cut(s)	80, 1700
PflFI	GACNNNGTC	1 cut(s)	240
PfoI	TCCNGGA	2 cut(s)	596, 810
PkrI	GCNGC	6 cut(s)	327, 492, 831, 928, 1203, 1276
PleI	GAGTC	2 cut(s)	680, 754
PpsI	GAGTC	2 cut(s)	680, 754
Ppu21I	YACGTR	1 cut(s)	1789
PshBI	ATTAAT	1 cut(s)	1101
Psp124BI	GAGCTC	1 cut(s)	670
Psp1406I	AACGTT	1 cut(s)	1188
Psp6I	CCWGG	4 cut(s)	406, 596, 810, 1346
PspGI	CCWGG	4 cut(s)	406, 596, 810, 1346
PspN4I	GGNNCC	5 cut(s)	595, 804, 1292, 1494, 1781
PspPI	GGNCC	3 cut(s)	86, 382, 1291
PsrI	GAACNNNNNNTAC	2 cut(s)	774, 806
PstI	CTGCAG	1 cut(s)	330
PstNI	CAGNNNCTG	1 cut(s)	932
PsuI	RGATCY	3 cut(s)	593, 1492, 1801
PsyI	GACNNNGTC	1 cut(s)	240
PvuII	CAGCTG	1 cut(s)	325
RruI	TCGCGA	1 cut(s)	486
RsaI	GTAC	3 cut(s)	397, 1006, 1477
RsaNI	GTAC	3 cut(s)	396, 1005, 1476
RseI	CAYNNNNRTG	1 cut(s)	1151
SacI	GAGCTC	1 cut(s)	670
SaqAI	TTAA	4 cut(s)	170, 270, 1101, 1247
SatI	GCNGC	6 cut(s)	326, 491, 830, 927, 1202, 1275
Sau3AI	GATC	7 cut(s)	593, 844, 1182, 1492, 1654, 1720, 1801
Sau96I	GGNCC	3 cut(s)	86, 382, 1291
ScaI	AGTACT	1 cut(s)	397
SchI	GAGTC	2 cut(s)	680, 754
ScrFI	CCNGG	4 cut(s)	408, 598, 812, 1348
SduI	GDGCHC	2 cut(s)	670, 863
SfaNI	GCATC	4 cut(s)	1003, 1153, 1602, 1751
SfcI	CTRYAG	5 cut(s)	231, 326, 508, 900, 1108
SfuI	TTCGAA	1 cut(s)	154
SmiMI	CAYNNNNRTG	1 cut(s)	1151
SmlI	CTYRAG	2 cut(s)	368, 1387
SmoI	CTYRAG	2 cut(s)	368, 1387
SpeI	ACTAGT	1 cut(s)	710
SphI	GCATGC	1 cut(s)	1214
SspMI	CTAG	5 cut(s)	671, 711, 729, 864, 1805
SstI	GAGCTC	1 cut(s)	670
StyD4I	CCNGG	4 cut(s)	406, 596, 810, 1346
StyI	CCWWGG	3 cut(s)	245, 303, 1817
TaaI	ACNGT	3 cut(s)	25, 528, 1359
TaiI	ACGT	2 cut(s)	1191, 1791
TaqI	TCGA	7 cut(s)	154, 163, 318, 968, 1122, 1589, 1628
TatI	WGTACW	1 cut(s)	395
TfiI	GAWTC	2 cut(s)	80, 1700
Tru1I	TTAA	4 cut(s)	170, 270, 1101, 1247
Tru9I	TTAA	4 cut(s)	170, 270, 1101, 1247
TscAI	CASTG	4 cut(s)	533, 863, 928, 1678
TseFI	GTSAC	3 cut(s)	740, 1144, 1669
TseI	GCWGC	6 cut(s)	325, 490, 829, 926, 1201, 1274
Tsp45I	GTSAC	3 cut(s)	740, 1144, 1669
TspDTI	ATGAA	6 cut(s)	92, 198, 210, 267, 599, 1549
TspRI	CASTG	4 cut(s)	533, 863, 928, 1678
Tth111I	GACNNNGTC	1 cut(s)	240
VspI	ATTAAT	1 cut(s)	1101
XagI	CCTNNNNNAGG	1 cut(s)	776
XapI	RAATTY	3 cut(s)	142, 643, 1230
XceI	RCATGY	3 cut(s)	367, 497, 1214
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1025
XmiI	GTMKAC	2 cut(s)	230, 1509
XmnI	GAANNNNTTC	4 cut(s)	789, 801, 1078, 1556
XspI	CTAG	5 cut(s)	671, 711, 729, 864, 1805
ZrmI	AGTACT	1 cut(s)	397
Zsp2I	ATGCAT	3 cut(s)	1212, 1216, 1718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.