Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005354

Physical Location & Seq

Genomic Coordinates Reverse (-)

20098368 .. 20104816

Gene Structure 6449 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG219400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGTGGGTTTTATCTGTAACACAGTTGGAGAGAAAGATGGGTGTCAAGAACAAGCAGGTGGGAAAAGAGAGAATGGAGAGTCTGGGCCACGCTCAGATGTTCATACCCAACACAGGCGCTCCAAAAGTGCTTCTGAGAAGAATTTTGGTATTCGAAGAGGTCGAGTTTTAAGTTCCACAAAGAAGGACAAGAATGAAACACAGGTTTCATCACCTTCAACAAGTGCGTCAACAGGACAAAGTCCTTGGCATGAAAATCCTATTTATTTTAACAAGAATATGTCATTGAACAACAGAGCGTCCTTGGAAAAAGATATCGAACAGCTGCAGTTGCGTTTGCAGGAAGAGAAATCTATGCGTAACATGCTTGAGAGGGCAATGGGCCGAGCTTCAAGTACTCTATCACCTGGACATAGACATTTCTCTGTCCAGACGAAGGAATTGATTTCTGAAATTGAATTACTTGAAGAAGAAGTTGCAAATCGCGAGCAGCATGTTCTCTCTCTCTATAGGAGTATTTTTGAACAGTGTGTTAGTAAGCCACCTTCGGAGCAGAACTCACTTGTTGCTTCCCCTGCTCATATGAAGAATGGATCCAGGAAACATCCCAGTATCATTTCAAGTGCATTTTGTTCTGCAAAAAATTTTCCTTTCCGACATTTCAGAGCTCTAGTTGCCATAGATGACTCGGGAAAAAGAGCTTCCAAGACTAGTCATAGTCCACTATCTAGTGGCAAAAGTGACATTGATTTTGCAAAGACTCGTTCAAACCTTTCCAAGGTTCGTGAAAGGGTTCCAGTCCTGGAGAAAACTTCCATGCTGCGAACTCTGAAAGATCATCTCCACCAGTGCCCTAGCAAGTTAGCTGAGGAAATGATCAGGTGTATGTCTCTAGTTTATTGTTGGCTTTGCAGTGCAGCCTCTGAGAAGATTGAGAAAAACCATTCGCCTTTGCTGTCGAGGTCATCCACTAATGTTTTACAGCCTCCACATGGTACTGAAGATGCCCAAGATTGGTCAGGCAAATCAATGGTAGAAATATCTTGGATATCAACCGATAAGAGAAAGTCTTCTCATGCTTCTTATGCCATTAATAACTATAGAATGTTGGTCGAGCAACTGGAGAAGGTGGATGTCACTCAGATGGAATTGGATGCCCAAATTGCATTTTGGATCAACGTTTACAATGCGCTGCTTATGCATGCATATTTAGCATATGGAATTCCCAACAGCTCTTTAAGAAGGTTGGCCTTGTTCCATAAGGCTGCTTACAACATTGGGGGCCTTGTCATCAGCGCAAATGCCATAGAGCAATCCATATTTGGCTTCCAAACACCAAGGATTGGACGGTGGCTTGAAACATTCCTTTCAACTGCCTTGAGGAAGAAGTTTGGGGAAGACAGACAGCTTCGCAATTCAAAATTGGGTCTCCCAGTTTCCGAACCCCTTGTTTGCTTTGCTCTTTGTACCGGAGCTTTTTCTGATCCTGCGTTGAAAGTCTACACAGCCTCAAATGTTAGAGATGAGCTTGAAGAAGCAAAGAAAGATTTCATCAAAGCAAATGTAGTGGTAAAGAAGTCGAGGAAAGTTTTTCTACCAAAGATGCTTGAAAGATTTTCGAGGGAAGCGTCTTTTGGCTCTGATGATCTTCTCAAATGGGTCACTGACAATGTTGATGAGAAGCTTCAGGATTCAATTAGAAAATGCATTGATCATAAATCCAGCAAGAAGGCAGCTCAAATCATAGAGTGGTTGCCTTACAATTCAAGGTTCCGATACGTGTTCCCAAAGGATCTTGCAGAAAAGCCATGGTGGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF547 Lzipper-MIP1

Protein Analysis

606

Amino Acids

68.65

Weight (kDa)

9.39

Isoelectric Point (pI)

52.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lzipper-MIP1	PF14389	97 - 176	1.2e-20	Leucine-zipper of ternary complex factor MIP1
DUF547	PF04784	380 - 518	7.3e-37	Protein of unknown function, DUF547

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005354)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G47380 AT5G47380 AT5G47380 AT5G47380 AT5G47380
fragaria_vesca	FvH4_5g19100 FvH4_5g19100 FvH4_5g19100 FvH4_5g19100 FvH4_5g19100
malus_domestica	MD06G1057000.v1.1
prunus_persica	Prupe.5G067800_v2.0.a1 Prupe.5G067800_v2.0.a1
pyrus_communis	pycom06g04760
rosa_chinensis	RchiOBHm_Chr7g0203571
rosa_laevigata	RLG00000003517
rosa_multiflora	Rmu_sc0007757.1_g000001 Rmu_sc0017396.1_g000001
rosa_roxburghii	Rroxscaffold_3G00253670 Rroxscaffold_3G00253710
rosa_rugosa	Rorug07G0077000 Rorug07G0077100 Rorug07G0077100 Rorug07G0077200
rosa_samantha	Rh7AG206800 Rh7BG206300 Rh7CG219400 Rh7DG214000
rosa_wichuraiana	Rw7G018040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	47
Acc36I	ACCTGC	1 cut(s)	47
AccB7I	CCANNNNNTGG	1 cut(s)	1343
AccI	GTMKAC	1 cut(s)	1500
AccII	CGCG	1 cut(s)	486
AclI	AACGTT	1 cut(s)	1179
AclWI	GGATC	5 cut(s)	588, 601, 1181, 1478, 1800
AcsI	RAATTY	3 cut(s)	142, 643, 1221
AcuI	CTGAAG	2 cut(s)	1020, 1670
AfaI	GTAC	3 cut(s)	397, 997, 1468
AfiI	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 992, 1014, 1343
AflIII	ACRYGT	1 cut(s)	1779
AhlI	ACTAGT	1 cut(s)	710
AjnI	CCWGG	3 cut(s)	406, 596, 801
AjuI	GAANNNNNNNTTGG	2 cut(s)	1617, 1649
Alw21I	GWGCWC	1 cut(s)	670
Alw26I	GTCTC	2 cut(s)	894, 1433
AlwI	GGATC	5 cut(s)	588, 601, 1181, 1478, 1800
AlwNI	CAGNNNCTG	1 cut(s)	923
Ama87I	CYCGRG	1 cut(s)	688
AoxI	GGCC	4 cut(s)	86, 382, 1248, 1282
ApeKI	GCWGC	7 cut(s)	325, 490, 820, 917, 1192, 1265, 1733
ApoI	RAATTY	3 cut(s)	142, 643, 1221
ArsI	GACNNNNNNTTYG	2 cut(s)	734, 766
AseI	ATTAAT	1 cut(s)	1092
Asp700I	GAANNNNTTC	3 cut(s)	792, 1069, 1547
AspLEI	GCGC	3 cut(s)	120, 1192, 1298
AspS9I	GGNCC	3 cut(s)	86, 382, 1282
AsuHPI	GGTGA	2 cut(s)	204, 396
AsuII	TTCGAA	1 cut(s)	154
AvaI	CYCGRG	1 cut(s)	688
BaeGI	GKGCMC	1 cut(s)	854
BamHI	GGATCC	1 cut(s)	593
BanII	GRGCYC	1 cut(s)	670
BarI	GAAGNNNNNNTAC	2 cut(s)	529, 561
BbsI	GAAGAC	2 cut(s)	1062, 1404
Bbv12I	GWGCWC	1 cut(s)	670
BbvCI	CCTCAGC	1 cut(s)	867
BbvI	GCAGC	7 cut(s)	312, 502, 807, 929, 1179, 1252, 1745
BccI	CCATC	2 cut(s)	32, 1138
BciT130I	CCWGG	3 cut(s)	408, 598, 803
BclI	TGATCA	2 cut(s)	876, 1711
BcoDI	GTCTC	2 cut(s)	894, 1433
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	5 cut(s)	671, 711, 729, 855, 893
BfmI	CTRYAG	3 cut(s)	326, 508, 1099
BfoI	RGCGCY	1 cut(s)	121
BfuAI	ACCTGC	1 cut(s)	47
BisI	GCNGC	7 cut(s)	326, 491, 821, 918, 1193, 1266, 1734
BlsI	GCNGC	7 cut(s)	327, 492, 822, 919, 1194, 1267, 1735
BmcAI	AGTACT	1 cut(s)	397
Bme1390I	CCNGG	3 cut(s)	408, 598, 803
BmeT110I	CYCGRG	1 cut(s)	688
BmgT120I	GGNCC	3 cut(s)	86, 382, 1282
BmiI	GGNNCC	4 cut(s)	595, 795, 1283, 1772
BmrFI	CCNGG	3 cut(s)	408, 598, 803
BmrI	ACTGGG	2 cut(s)	603, 1427
BmsI	GCATC	3 cut(s)	994, 1144, 1593
BmuI	ACTGGG	2 cut(s)	603, 1427
BpiI	GAAGAC	2 cut(s)	1062, 1404
BplI	GAGNNNNNCTC	2 cut(s)	542, 574
BpmI	CTGGAG	2 cut(s)	824, 1142
Bpu10I	CCTNAGC	1 cut(s)	867
Bpu14I	TTCGAA	1 cut(s)	154
BpuEI	CTTGAG	2 cut(s)	389, 1399
BsaAI	YACGTR	1 cut(s)	1780
BsaI	GGTCTC	1 cut(s)	1433
BsaJI	CCNNGG	5 cut(s)	245, 303, 777, 1337, 1808
BsaWI	WCCGGW	1 cut(s)	1469
BsaXI	ACNNNNNCTCC	2 cut(s)	104, 134
Bsc4I	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 992, 1014, 1343
Bse1I	ACTGG	5 cut(s)	609, 797, 847, 1125, 1433
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	3 cut(s)	408, 598, 803
BseDI	CCNNGG	5 cut(s)	245, 303, 777, 1337, 1808
BseGI	GGATG	4 cut(s)	604, 965, 1138, 1159
BseLI	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 992, 1014, 1343
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	5 cut(s)	108, 126, 858, 915, 1154
BseNI	ACTGG	5 cut(s)	609, 797, 847, 1125, 1433
BseSI	GKGCMC	1 cut(s)	854
BseXI	GCAGC	7 cut(s)	312, 502, 807, 929, 1179, 1252, 1745
BsgI	GTGCAG	1 cut(s)	936
Bsh1236I	CGCG	1 cut(s)	486
BshFI	GGCC	4 cut(s)	88, 384, 1250, 1284
BsiHKAI	GWGCWC	1 cut(s)	670
BsiHKCI	CYCGRG	1 cut(s)	688
BsiSI	CCGG	1 cut(s)	1470
BslI	CCNNNNNNNGG	6 cut(s)	114, 436, 778, 992, 1014, 1343
BsmAI	GTCTC	2 cut(s)	894, 1433
BsnI	GGCC	4 cut(s)	88, 384, 1250, 1284
Bso31I	GGTCTC	1 cut(s)	1433
BsoBI	CYCGRG	1 cut(s)	688
Bsp119I	TTCGAA	1 cut(s)	154
Bsp1286I	GDGCHC	2 cut(s)	670, 854
Bsp143I	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
Bsp19I	CCATGG	1 cut(s)	1808
Bsp68I	TCGCGA	1 cut(s)	486
BspANI	GGCC	4 cut(s)	88, 384, 1250, 1284
BspCNI	CTCAG	5 cut(s)	107, 127, 859, 916, 1153
BspFNI	CGCG	1 cut(s)	486
BspLI	GGNNCC	4 cut(s)	595, 795, 1283, 1772
BspMAI	CTGCAG	1 cut(s)	330
BspMI	ACCTGC	1 cut(s)	47
BspPI	GGATC	5 cut(s)	588, 601, 1181, 1478, 1800
BspT104I	TTCGAA	1 cut(s)	154
BspTNI	GGTCTC	1 cut(s)	1433
BsrDI	GCAATG	1 cut(s)	384
BsrI	ACTGG	5 cut(s)	609, 797, 847, 1125, 1433
BssECI	CCNNGG	5 cut(s)	245, 303, 777, 1337, 1808
BssMI	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
BssT1I	CCWWGG	5 cut(s)	245, 303, 777, 1337, 1808
Bst2UI	CCWGG	3 cut(s)	408, 598, 803
Bst4CI	ACNGT	3 cut(s)	25, 528, 1350
Bst6I	CTCTTC	2 cut(s)	151, 339
BstBAI	YACGTR	1 cut(s)	1780
BstBI	TTCGAA	1 cut(s)	154
BstC8I	GCNNGC	2 cut(s)	488, 1203
BstDEI	CTNAG	5 cut(s)	94, 135, 867, 924, 1140
BstDSI	CCRYGG	1 cut(s)	1808
BstENI	CCTNNNNNAGG	1 cut(s)	776
BstF5I	GGATG	4 cut(s)	604, 965, 1138, 1159
BstFNI	CGCG	1 cut(s)	486
BstH2I	RGCGCY	1 cut(s)	121
BstHHI	GCGC	3 cut(s)	120, 1192, 1298
BstKTI	GATC	8 cut(s)	596, 838, 879, 1176, 1486, 1648, 1714, 1795
BstMAI	GTCTC	2 cut(s)	894, 1433
BstMBI	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
BstMWI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1085, 1163, 1198, 1211
BstNI	CCWGG	3 cut(s)	408, 598, 803
BstNSI	RCATGY	3 cut(s)	367, 497, 1205
BstSCI	CCNGG	3 cut(s)	406, 596, 801
BstSFI	CTRYAG	3 cut(s)	326, 508, 1099
BstSLI	GKGCMC	1 cut(s)	854
BstUI	CGCG	1 cut(s)	486
BstV1I	GCAGC	7 cut(s)	312, 502, 807, 929, 1179, 1252, 1745
BstV2I	GAAGAC	2 cut(s)	1062, 1404
BstX2I	RGATCY	2 cut(s)	593, 1792
BstYI	RGATCY	2 cut(s)	593, 1792
BsuRI	GGCC	4 cut(s)	88, 384, 1250, 1284
BtgI	CCRYGG	1 cut(s)	1808
BtsCI	GGATG	4 cut(s)	604, 965, 1138, 1159
BtsI	GCAGTG	1 cut(s)	919
BtsIMutI	CAGTG	4 cut(s)	533, 854, 919, 1662
BtuMI	TCGCGA	1 cut(s)	486
BveI	ACCTGC	1 cut(s)	47
Cac8I	GCNNGC	2 cut(s)	488, 1203
CaiI	CAGNNNCTG	1 cut(s)	923
CfoI	GCGC	3 cut(s)	120, 1192, 1298
Cfr13I	GGNCC	3 cut(s)	86, 382, 1282
CseI	GACGC	3 cut(s)	216, 288, 1617
Csp6I	GTAC	3 cut(s)	396, 996, 1467
CspCI	CAANNNNNGTGG	2 cut(s)	1548, 1583
CviAII	CATG	8 cut(s)	251, 364, 494, 817, 992, 1076, 1202, 1809
CviQI	GTAC	3 cut(s)	396, 996, 1467
DdeI	CTNAG	5 cut(s)	94, 135, 867, 924, 1140
DpnI	GATC	8 cut(s)	595, 837, 878, 1175, 1485, 1647, 1713, 1794
DpnII	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
Eam1104I	CTCTTC	2 cut(s)	151, 339
EarI	CTCTTC	2 cut(s)	151, 339
Ecl136II	GAGCTC	1 cut(s)	668
Eco130I	CCWWGG	5 cut(s)	245, 303, 777, 1337, 1808
Eco24I	GRGCYC	1 cut(s)	670
Eco31I	GGTCTC	1 cut(s)	1433
Eco32I	GATATC	2 cut(s)	316, 1050
Eco53kI	GAGCTC	1 cut(s)	668
Eco57I	CTGAAG	2 cut(s)	1020, 1670
Eco88I	CYCGRG	1 cut(s)	688
EcoICRI	GAGCTC	1 cut(s)	668
EcoNI	CCTNNNNNAGG	1 cut(s)	776
EcoO109I	RGGNCCY	1 cut(s)	1282
EcoRI	GAATTC	1 cut(s)	1221
EcoRII	CCWGG	3 cut(s)	406, 596, 801
EcoRV	GATATC	2 cut(s)	316, 1050
EcoT14I	CCWWGG	5 cut(s)	245, 303, 777, 1337, 1808
EcoT22I	ATGCAT	3 cut(s)	1203, 1207, 1709
EcoT38I	GRGCYC	1 cut(s)	670
ErhI	CCWWGG	5 cut(s)	245, 303, 777, 1337, 1808
FaeI	CATG	8 cut(s)	254, 367, 497, 820, 995, 1079, 1205, 1812
FatI	CATG	8 cut(s)	250, 363, 493, 816, 991, 1075, 1201, 1808
FauNDI	CATATG	2 cut(s)	582, 1216
FbaI	TGATCA	2 cut(s)	876, 1711
FblI	GTMKAC	1 cut(s)	1500
Fnu4HI	GCNGC	7 cut(s)	326, 491, 821, 918, 1193, 1266, 1734
FokI	GGATG	4 cut(s)	591, 952, 1145, 1166
FriOI	GRGCYC	1 cut(s)	670
Fsp4HI	GCNGC	7 cut(s)	326, 491, 821, 918, 1193, 1266, 1734
FspBI	CTAG	5 cut(s)	671, 711, 729, 855, 893
GlaI	GCGC	3 cut(s)	119, 1191, 1297
GluI	GCNGC	7 cut(s)	326, 491, 821, 918, 1193, 1266, 1734
GsuI	CTGGAG	2 cut(s)	824, 1142
HaeII	RGCGCY	1 cut(s)	121
HaeIII	GGCC	4 cut(s)	88, 384, 1250, 1284
HapII	CCGG	1 cut(s)	1470
HgaI	GACGC	3 cut(s)	216, 288, 1617
HhaI	GCGC	3 cut(s)	120, 1192, 1298
Hin1II	CATG	8 cut(s)	254, 367, 497, 820, 995, 1079, 1205, 1812
Hin6I	GCGC	3 cut(s)	118, 1190, 1296
HinP1I	GCGC	3 cut(s)	118, 1190, 1296
HincII	GTYRAC	1 cut(s)	231
HindII	GTYRAC	1 cut(s)	231
HindIII	AAGCTT	1 cut(s)	1682
HinfI	GANTC	4 cut(s)	80, 686, 760, 1691
HpaII	CCGG	1 cut(s)	1470
HphI	GGTGA	2 cut(s)	204, 396
Hpy166II	GTNNAC	4 cut(s)	231, 722, 1183, 1501
Hpy188III	TCNNGA	6 cut(s)	47, 430, 485, 690, 785, 1688
Hpy8I	GTNNAC	4 cut(s)	231, 722, 1183, 1501
HpyAV	CCTTC	7 cut(s)	178, 225, 430, 555, 1120, 1236, 1723
HpyCH4III	ACNGT	3 cut(s)	25, 528, 1350
HpyCH4IV	ACGT	2 cut(s)	1179, 1779
HpyF10VI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1085, 1163, 1198, 1211
HpyF3I	CTNAG	5 cut(s)	94, 135, 867, 924, 1140
HpySE526I	ACGT	2 cut(s)	1179, 1779
Hsp92II	CATG	8 cut(s)	254, 367, 497, 820, 995, 1079, 1205, 1812
HspAI	GCGC	3 cut(s)	118, 1190, 1296
Ksp22I	TGATCA	2 cut(s)	876, 1711
Kzo9I	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
LmnI	GCTCC	3 cut(s)	125, 550, 1472
Lsp1109I	GCAGC	7 cut(s)	312, 502, 807, 929, 1179, 1252, 1745
LweI	GCATC	3 cut(s)	994, 1144, 1593
MaeI	CTAG	5 cut(s)	671, 711, 729, 855, 893
MaeII	ACGT	2 cut(s)	1179, 1779
MaeIII	GTNAC	5 cut(s)	17, 359, 740, 1135, 1660
MalI	GATC	8 cut(s)	595, 837, 878, 1175, 1485, 1647, 1713, 1794
MboI	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
MflI	RGATCY	2 cut(s)	593, 1792
MhlI	GDGCHC	2 cut(s)	670, 854
MlyI	GAGTC	3 cut(s)	89, 680, 754
MmeI	TCCRAC	2 cut(s)	7, 679
Mph1103I	ATGCAT	3 cut(s)	1203, 1207, 1709
MroXI	GAANNNNTTC	3 cut(s)	792, 1069, 1547
MseI	TTAA	4 cut(s)	170, 270, 1092, 1238
MslI	CAYNNNNRTG	1 cut(s)	1142
MspA1I	CMGCKG	1 cut(s)	325
MspI	CCGG	1 cut(s)	1470
MspR9I	CCNGG	3 cut(s)	408, 598, 803
MvaI	CCWGG	3 cut(s)	408, 598, 803
MvnI	CGCG	1 cut(s)	486
MwoI	GCNNNNNNNGC	8 cut(s)	331, 364, 575, 674, 1085, 1163, 1198, 1211
NcoI	CCATGG	1 cut(s)	1808
NdeI	CATATG	2 cut(s)	582, 1216
NdeII	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
NlaIII	CATG	8 cut(s)	254, 367, 497, 820, 995, 1079, 1205, 1812
NlaIV	GGNNCC	4 cut(s)	595, 795, 1283, 1772
NmeAIII	GCCGAG	1 cut(s)	410
NmuCI	GTSAC	3 cut(s)	740, 1135, 1660
NruI	TCGCGA	1 cut(s)	486
NsiI	ATGCAT	3 cut(s)	1203, 1207, 1709
NspI	RCATGY	3 cut(s)	367, 497, 1205
NspV	TTCGAA	1 cut(s)	154
PaeI	GCATGC	1 cut(s)	1205
PaqCI	CACCTGC	1 cut(s)	47
PcsI	WCGNNNNNNNCGW	2 cut(s)	160, 1625
PdmI	GAANNNNTTC	3 cut(s)	792, 1069, 1547
PfeI	GAWTC	1 cut(s)	1691
PflFI	GACNNNGTC	1 cut(s)	240
PflMI	CCANNNNNTGG	1 cut(s)	1343
PfoI	TCCNGGA	2 cut(s)	596, 801
PkrI	GCNGC	7 cut(s)	327, 492, 822, 919, 1194, 1267, 1735
PleI	GAGTC	3 cut(s)	88, 680, 754
PpsI	GAGTC	3 cut(s)	88, 680, 754
Ppu21I	YACGTR	1 cut(s)	1780
PshBI	ATTAAT	1 cut(s)	1092
Psp124BI	GAGCTC	1 cut(s)	670
Psp1406I	AACGTT	1 cut(s)	1179
Psp6I	CCWGG	3 cut(s)	406, 596, 801
PspGI	CCWGG	3 cut(s)	406, 596, 801
PspN4I	GGNNCC	4 cut(s)	595, 795, 1283, 1772
PspPI	GGNCC	3 cut(s)	86, 382, 1282
PstI	CTGCAG	1 cut(s)	330
PstNI	CAGNNNCTG	1 cut(s)	923
PsuI	RGATCY	2 cut(s)	593, 1792
PsyI	GACNNNGTC	1 cut(s)	240
PvuII	CAGCTG	1 cut(s)	325
RruI	TCGCGA	1 cut(s)	486
RsaI	GTAC	3 cut(s)	397, 997, 1468
RsaNI	GTAC	3 cut(s)	396, 996, 1467
RseI	CAYNNNNRTG	1 cut(s)	1142
SacI	GAGCTC	1 cut(s)	670
SaqAI	TTAA	4 cut(s)	170, 270, 1092, 1238
SatI	GCNGC	7 cut(s)	326, 491, 821, 918, 1193, 1266, 1734
Sau3AI	GATC	8 cut(s)	593, 835, 876, 1173, 1483, 1645, 1711, 1792
Sau96I	GGNCC	3 cut(s)	86, 382, 1282
ScaI	AGTACT	1 cut(s)	397
SchI	GAGTC	3 cut(s)	89, 680, 754
ScrFI	CCNGG	3 cut(s)	408, 598, 803
SduI	GDGCHC	2 cut(s)	670, 854
SfaNI	GCATC	3 cut(s)	994, 1144, 1593
SfcI	CTRYAG	3 cut(s)	326, 508, 1099
SfuI	TTCGAA	1 cut(s)	154
SmiMI	CAYNNNNRTG	1 cut(s)	1142
SmlI	CTYRAG	2 cut(s)	368, 1378
SmoI	CTYRAG	2 cut(s)	368, 1378
SpeI	ACTAGT	1 cut(s)	710
SphI	GCATGC	1 cut(s)	1205
SspMI	CTAG	5 cut(s)	671, 711, 729, 855, 893
SstI	GAGCTC	1 cut(s)	670
StyD4I	CCNGG	3 cut(s)	406, 596, 801
StyI	CCWWGG	5 cut(s)	245, 303, 777, 1337, 1808
TaaI	ACNGT	3 cut(s)	25, 528, 1350
TaiI	ACGT	2 cut(s)	1182, 1782
TaqI	TCGA	7 cut(s)	154, 163, 318, 959, 1113, 1580, 1619
TatI	WGTACW	1 cut(s)	395
TfiI	GAWTC	1 cut(s)	1691
Tru1I	TTAA	4 cut(s)	170, 270, 1092, 1238
Tru9I	TTAA	4 cut(s)	170, 270, 1092, 1238
TscAI	CASTG	4 cut(s)	533, 854, 919, 1669
TseFI	GTSAC	3 cut(s)	740, 1135, 1660
TseI	GCWGC	7 cut(s)	325, 490, 820, 917, 1192, 1265, 1733
Tsp45I	GTSAC	3 cut(s)	740, 1135, 1660
TspDTI	ATGAA	6 cut(s)	92, 198, 210, 267, 599, 1540
TspRI	CASTG	4 cut(s)	533, 854, 919, 1669
Tth111I	GACNNNGTC	1 cut(s)	240
Van91I	CCANNNNNTGG	1 cut(s)	1343
VspI	ATTAAT	1 cut(s)	1092
XagI	CCTNNNNNAGG	1 cut(s)	776
XapI	RAATTY	3 cut(s)	142, 643, 1221
XceI	RCATGY	3 cut(s)	367, 497, 1205
XmiI	GTMKAC	1 cut(s)	1500
XmnI	GAANNNNTTC	3 cut(s)	792, 1069, 1547
XspI	CTAG	5 cut(s)	671, 711, 729, 855, 893
ZrmI	AGTACT	1 cut(s)	397
Zsp2I	ATGCAT	3 cut(s)	1203, 1207, 1709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.