Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0010436

Physical Location & Seq

Genomic Coordinates Reverse (-)

58456232 .. 58458220

Gene Structure 1989 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004340

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGAGGTCCTTACCTCTCCCCCTCCTCCTCTTCCACGTCCTCTCCCCTACTCTCGCCCTCGACTTCCTCTTCAACTCCTTCTCCAACATCTCCAACGCCACCGACTTCACTCTCATCAACGACGCCAGACTCGACGCCTCCGCCGTCCGCCTCACAAACGACTCCGTTCAGTACTCCCTCGGCCGCCTCTTCCACACCACCAAGCTCACCATGAGACCTAATTCCACCTCCGCTTCCCTCGCTTCCTTTTCAACCTCCTTCGTCTTCTCCGATCTCCCCCAAATCGCTTCCAGCCCAGGCTTCGGCCTCTGCTTCGTCCTCTCCAACTCCACCTCTCCCCCTAACGCCCTCGCCAGCCAGTACTTCGGCCTCTTCTCAAACGCCCAGGATCAGGTCGTAGCTCCCTTACTCGCCGTCGAATTCGACACGGGCCGAAACACCGAGTTCAACGATCCCGATGGAAACCACATCGGAATCGACCTCAACAGCGTCATATCGGAGGTCACTAGGCCCGCCGGCTACTACAATTCCACCGGCGGCTTCGTTCCGGTCCAGATGCGGAGTGGCGAGAACGTCCGGGCTTGGATCGAATTCGACGGTGATAATCTCGAAATCAACGTCACCGTGGCTCCGGCTAATCTGCCACGGCCTACTCTGCCTACGCTGACCTTCAAAGACCCAAAGATTGCGAACTACGTGTCGTCGGAGATGTTCGTTGGGTTTTCGGCGTCGAAAACGGAGTGGATTGAGGCGCAGAGAATTTTGGCTTGGAGTTTCAGTGACACTGGTGTTGCTAAGGAGATCAACGTGACCAATTTGCCTGTTTTCGAGCTCCAGGCTTCTTCCAAATCCTTGCCTAAGGGAGCCATTGCTGGTATTACAATAGGTTGCGTTTTGTTTGTGGTGACTTTAGCTTCTGGAGTGTACTTGTATTGGAGGAAGAAGAAGCTGGAGGATGAAGAAGATGATGAGATTGAGGATTGGGAGATGGAGTATTGGCCTCATCGATTTTCGAATGAAGAGCTGAGTGAGGCTACTGGTGGATTTTCCAAAGATCAGCTTTTGGGTTCTGGTGGATTTGGGAAGGTTTACAGAGGTGTTTTATCTAACAAGACGGAGATAGCAGTGAAATGTGTGAACCATGATTCGAAGCAGGGGTTGAGAGAATTTATGGCTGAGATTTCGAGCATGGGGAGACTGCAGCATAAGAATTTGGTCCAAATGCGAGGGTGGTGCAGAAAAGGAAACCAGCTCATGCTTGTGTACGACTACATGCCTAATGGGAGCCTCAACAGGTGGATTTTCGACAGGCCGAAGAAGGTTTTGGGGTGGGGGCAACGGCGGCGTGTGTTGGCAGACGTGGCGGAGGGGCTGAACTATCTGCACCACGGCTGGGACCAAGTGGTGGTTCATAGAGACATTAAGTCGAGCAATATATTGCTGGACTTGGAAATGAGAGGCAGGCTTGGTGATTTTGGATTGGCCAAGCTGTATGAGCACGGTGAAGTGCCTAAAACCACTCGTGTGGTCGGCACGATGGGTTACTTGGCGCCGGAGCTGGCTACCATAGCGTCACCAACAGCAGCGACTGATGTGTATAGCTTTGGAGTGGTGTTGTTGGAAGTGGCGTGTGGAAGAAGGCCTATTGAAATGGGGGCAGAGGAGGAGGACGAGGCAGTGCTGATCGATTGGGTGAAAGAGTTGTATTCGAAAGGGAGGGTGAGAGAGGCGGCGGACCAGAGAATTAAAGGGGAGTATGATGAGGAGGAGATGGAGGTTGTATTGAAGCTTGGGTTGGCTTGTTGTCATCCTGATCCTCAGAGAAGGCCTAGTATGAAGGAAATTGCGGCAATTTTGGTCGGCGAGACAGTGTCCGAGCCAGCATCTGCCGCATTGTTATCAGAACTGGCACGCGGCAAGGGTGGTGATGGTGCTGGCAGCGAGGAAGAATCCGGGGAAGTAGCATTCCAACCCCAGCATTCAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase

Protein Analysis

663

Amino Acids

73.01

Weight (kDa)

5.12

Isoelectric Point (pI)

41.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	20 - 273	4.1e-61	Legume lectin domain
Pkinase	PF00069	350 - 616	1.9e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	352 - 618	2.4e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15530
fragaria_vesca	FvH4_5g06170
malus_domestica	MD06G1166300.v1.1
prunus_persica	Prupe.5G166300_v2.0.a1 Prupe.5G166300_v2.0.a1
pyrus_communis	pycom06g14890 pycom10g29130 pycom14g14370
rosa_chinensis	RchiOBHm_Chr7g0192631
rosa_laevigata	RLG00000004340 RLG00000004343 RLG00000036720
rosa_multiflora	Rmu_sc0002040.1_g000001 Rmu_sc0035522.1_g000002
rosa_roxburghii	Rroxscaffold_3G00262790 Rroxscaffold_3G00262820
rosa_rugosa	Rorug07G0003200 Rorug07G0003300
rosa_samantha	Rh7BG129900 Rh7DG130900
rosa_wichuraiana	Rw7G010970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1549
AccB7I	CCANNNNNTGG	1 cut(s)	1405
AccII	CGCG	1 cut(s)	1914
AclWI	GGATC	4 cut(s)	396, 446, 593, 1808
AcoI	YGGCCR	2 cut(s)	181, 1482
AcsI	RAATTY	5 cut(s)	419, 590, 759, 1166, 1210
AcyI	GRCGYC	4 cut(s)	123, 135, 728, 1550
AfaI	GTAC	4 cut(s)	173, 362, 926, 1265
AfiI	CCNNNNNNNGG	4 cut(s)	302, 391, 1393, 1405
AflIII	ACRYGT	1 cut(s)	696
AgsI	TTSAA	6 cut(s)	73, 252, 448, 673, 1649, 1786
AhdI	GACNNNNNGTC	1 cut(s)	1423
AjiI	CACGTC	2 cut(s)	37, 1360
AjnI	CCWGG	3 cut(s)	295, 384, 834
AjuI	GAANNNNNNNTTGG	8 cut(s)	751, 783, 1307, 1339, 1392, 1424, 1778, 1810
AleI	CACNNNNGTG	1 cut(s)	1523
Alw21I	GWGCWC	2 cut(s)	834, 1500
Alw26I	GTCTC	4 cut(s)	208, 1189, 1410, 1859
AlwI	GGATC	4 cut(s)	396, 446, 593, 1808
AlwNI	CAGNNNCTG	2 cut(s)	1589, 1886
ApeKI	GCWGC	3 cut(s)	1201, 1583, 1938
ApoI	RAATTY	5 cut(s)	419, 590, 759, 1166, 1210
ArsI	GACNNNNNNTTYG	4 cut(s)	603, 635, 683, 715
AspLEI	GCGC	2 cut(s)	754, 1552
AspS9I	GGNCC	7 cut(s)	6, 430, 510, 550, 1216, 1396, 1735
AsuC2I	CCSGG	2 cut(s)	578, 1954
AsuII	TTCGAA	3 cut(s)	1013, 1148, 1709
AvaII	GGWCC	5 cut(s)	6, 550, 1216, 1396, 1735
AxyI	CCTNAGG	1 cut(s)	858
BalI	TGGCCA	1 cut(s)	1484
BanI	GGYRCC	1 cut(s)	1549
BanII	GRGCYC	1 cut(s)	834
BauI	CACGAG	1 cut(s)	1521
BbsI	GAAGAC	1 cut(s)	256
Bbv12I	GWGCWC	2 cut(s)	834, 1500
BbvI	GCAGC	3 cut(s)	1213, 1595, 1950
BccI	CCATC	5 cut(s)	452, 982, 1531, 1765, 1922
BceAI	ACGGC	5 cut(s)	128, 398, 662, 1355, 1405
BcgI	CGANNNNNNTGC	2 cut(s)	1215, 1249
BciT130I	CCWGG	3 cut(s)	297, 386, 836
BcnI	CCSGG	2 cut(s)	578, 1954
BcoDI	GTCTC	4 cut(s)	208, 1189, 1410, 1859
BfaI	CTAG	2 cut(s)	507, 1830
BfmI	CTRYAG	1 cut(s)	1199
BfoI	RGCGCY	1 cut(s)	1553
BmcAI	AGTACT	2 cut(s)	173, 362
Bme1390I	CCNGG	5 cut(s)	297, 386, 578, 836, 1954
Bme18I	GGWCC	5 cut(s)	6, 550, 1216, 1396, 1735
BmeRI	GACNNNNNGTC	1 cut(s)	1423
BmgBI	CACGTC	2 cut(s)	37, 1360
BmgT120I	GGNCC	7 cut(s)	6, 430, 510, 550, 1216, 1396, 1735
BmiI	GGNNCC	5 cut(s)	630, 865, 1286, 1397, 1551
BmrFI	CCNGG	5 cut(s)	297, 386, 578, 836, 1954
BmsI	GCATC	2 cut(s)	546, 1892
BpiI	GAAGAC	1 cut(s)	256
BpmI	CTGGAG	3 cut(s)	818, 939, 971
Bpu10I	CCTNAGC	1 cut(s)	795
Bpu14I	TTCGAA	3 cut(s)	1013, 1148, 1709
BpuMI	CCSGG	2 cut(s)	578, 1954
Bsa29I	ATCGAT	2 cut(s)	1006, 1686
BsaAI	YACGTR	1 cut(s)	697
BsaHI	GRCGYC	4 cut(s)	123, 135, 728, 1550
BsaI	GGTCTC	1 cut(s)	208
BsaJI	CCNNGG	7 cut(s)	178, 295, 384, 624, 644, 1387, 1953
BsaWI	WCCGGW	1 cut(s)	547
Bsc4I	CCNNNNNNNGG	4 cut(s)	302, 391, 1393, 1405
Bse118I	RCCGGY	2 cut(s)	515, 533
Bse1I	ACTGG	4 cut(s)	358, 790, 1042, 1911
Bse21I	CCTNAGG	1 cut(s)	858
Bse3DI	GCAATG	1 cut(s)	867
BseBI	CCWGG	3 cut(s)	297, 386, 836
BseCI	ATCGAT	2 cut(s)	1006, 1686
BseDI	CCNNGG	7 cut(s)	178, 295, 384, 624, 644, 1387, 1953
BseGI	GGATG	2 cut(s)	961, 1807
BseLI	CCNNNNNNNGG	4 cut(s)	302, 391, 1393, 1405
BseMI	GCAATG	1 cut(s)	867
BseMII	CTCAG	3 cut(s)	1016, 1167, 1832
BseNI	ACTGG	4 cut(s)	358, 790, 1042, 1911
BseRI	GAGGAG	6 cut(s)	14, 17, 1676, 1679, 1778, 1781
BseX3I	CGGCCG	1 cut(s)	181
BseXI	GCAGC	3 cut(s)	1213, 1595, 1950
BseYI	CCCAGC	2 cut(s)	1392, 1974
BsgI	GTGCAG	2 cut(s)	1255, 1367
Bsh1236I	CGCG	1 cut(s)	1914
Bsh1285I	CGRYCG	1 cut(s)	184
BshNI	GGYRCC	1 cut(s)	1549
BshVI	ATCGAT	2 cut(s)	1006, 1686
BsiEI	CGRYCG	1 cut(s)	184
BsiHKAI	GWGCWC	2 cut(s)	834, 1500
BsiSI	CCGG	7 cut(s)	516, 534, 548, 577, 632, 1553, 1953
BslFI	GGGAC	1 cut(s)	1409
BslI	CCNNNNNNNGG	4 cut(s)	302, 391, 1393, 1405
BsmAI	GTCTC	4 cut(s)	208, 1189, 1410, 1859
BsmFI	GGGAC	1 cut(s)	1409
BsmI	GAATGC	2 cut(s)	1964, 1978
Bso31I	GGTCTC	1 cut(s)	208
Bsp119I	TTCGAA	3 cut(s)	1013, 1148, 1709
Bsp1286I	GDGCHC	2 cut(s)	834, 1500
Bsp143I	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
BspCNI	CTCAG	3 cut(s)	1017, 1168, 1831
BspDI	ATCGAT	2 cut(s)	1006, 1686
BspFNI	CGCG	1 cut(s)	1914
BspLI	GGNNCC	5 cut(s)	630, 865, 1286, 1397, 1551
BspMAI	CTGCAG	1 cut(s)	1203
BspPI	GGATC	4 cut(s)	396, 446, 593, 1808
BspQI	GCTCTTC	1 cut(s)	1014
BspT104I	TTCGAA	3 cut(s)	1013, 1148, 1709
BspT107I	GGYRCC	1 cut(s)	1549
BspTNI	GGTCTC	1 cut(s)	208
BsrDI	GCAATG	1 cut(s)	867
BsrFI	RCCGGY	2 cut(s)	515, 533
BsrI	ACTGG	4 cut(s)	358, 790, 1042, 1911
BssAI	RCCGGY	2 cut(s)	515, 533
BssECI	CCNNGG	7 cut(s)	178, 295, 384, 624, 644, 1387, 1953
BssMI	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
BssNI	GRCGYC	4 cut(s)	123, 135, 728, 1550
BssSI	CACGAG	1 cut(s)	1521
Bst2BI	CACGAG	1 cut(s)	1521
Bst2UI	CCWGG	3 cut(s)	297, 386, 836
Bst4CI	ACNGT	4 cut(s)	599, 625, 1502, 1870
Bst6I	CTCTTC	5 cut(s)	35, 74, 194, 377, 1014
BstACI	GRCGYC	4 cut(s)	123, 135, 728, 1550
BstBAI	YACGTR	1 cut(s)	697
BstBI	TTCGAA	3 cut(s)	1013, 1148, 1709
BstC8I	GCNNGC	8 cut(s)	355, 513, 517, 1463, 1560, 1881, 1912, 1936
BstDEI	CTNAG	5 cut(s)	795, 858, 1025, 1176, 1818
BstDSI	CCRYGG	3 cut(s)	624, 644, 1387
BstF5I	GGATG	2 cut(s)	961, 1807
BstFNI	CGCG	1 cut(s)	1914
BstH2I	RGCGCY	1 cut(s)	1553
BstHHI	GCGC	2 cut(s)	754, 1552
BstKTI	GATC	8 cut(s)	274, 391, 454, 588, 804, 1057, 1686, 1816
BstMAI	GTCTC	4 cut(s)	208, 1189, 1410, 1859
BstMBI	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
BstMCI	CGRYCG	1 cut(s)	184
BstMWI	GCNNNNNNNGC	7 cut(s)	239, 655, 1342, 1361, 1495, 1568, 1889
BstNI	CCWGG	3 cut(s)	297, 386, 836
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	5 cut(s)	295, 384, 576, 834, 1952
BstSFI	CTRYAG	1 cut(s)	1199
BstUI	CGCG	1 cut(s)	1914
BstV1I	GCAGC	3 cut(s)	1213, 1595, 1950
BstV2I	GAAGAC	1 cut(s)	256
BstXI	CCANNNNNNTGG	1 cut(s)	1525
BstZI	CGGCCG	1 cut(s)	181
Bsu15I	ATCGAT	2 cut(s)	1006, 1686
Bsu36I	CCTNAGG	1 cut(s)	858
BsuTUI	ATCGAT	2 cut(s)	1006, 1686
BtgI	CCRYGG	3 cut(s)	624, 644, 1387
BtrI	CACGTC	2 cut(s)	37, 1360
BtsCI	GGATG	2 cut(s)	961, 1807
BtsI	GCAGTG	2 cut(s)	1131, 1683
BtsIMutI	CAGTG	6 cut(s)	783, 784, 1131, 1683, 1875, 1989
Cac8I	GCNNGC	8 cut(s)	355, 513, 517, 1463, 1560, 1881, 1912, 1936
CaiI	CAGNNNCTG	2 cut(s)	1589, 1886
CfoI	GCGC	2 cut(s)	754, 1552
Cfr10I	RCCGGY	2 cut(s)	515, 533
Cfr13I	GGNCC	7 cut(s)	6, 430, 510, 550, 1216, 1396, 1735
ClaI	ATCGAT	2 cut(s)	1006, 1686
CseI	GACGC	5 cut(s)	131, 143, 478, 717, 1560
Csp6I	GTAC	4 cut(s)	172, 361, 925, 1264
CviAII	CATG	5 cut(s)	211, 1142, 1189, 1255, 1273
CviQI	GTAC	4 cut(s)	172, 361, 925, 1264
DdeI	CTNAG	5 cut(s)	795, 858, 1025, 1176, 1818
DinI	GGCGCC	1 cut(s)	1551
DpnI	GATC	8 cut(s)	273, 390, 453, 587, 803, 1056, 1685, 1815
DpnII	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
DriI	GACNNNNNGTC	1 cut(s)	1423
EaeI	YGGCCR	2 cut(s)	181, 1482
EagI	CGGCCG	1 cut(s)	181
Eam1104I	CTCTTC	5 cut(s)	35, 74, 194, 377, 1014
Eam1105I	GACNNNNNGTC	1 cut(s)	1423
EarI	CTCTTC	5 cut(s)	35, 74, 194, 377, 1014
EciI	GGCGGA	4 cut(s)	130, 137, 1379, 1748
Ecl136II	GAGCTC	1 cut(s)	832
EclXI	CGGCCG	1 cut(s)	181
Eco147I	AGGCCT	2 cut(s)	1642, 1828
Eco24I	GRGCYC	1 cut(s)	834
Eco31I	GGTCTC	1 cut(s)	208
Eco47I	GGWCC	5 cut(s)	6, 550, 1216, 1396, 1735
Eco52I	CGGCCG	1 cut(s)	181
Eco53kI	GAGCTC	1 cut(s)	832
Eco81I	CCTNAGG	1 cut(s)	858
EcoICRI	GAGCTC	1 cut(s)	832
EcoO109I	RGGNCCY	1 cut(s)	6
EcoRI	GAATTC	2 cut(s)	419, 590
EcoRII	CCWGG	3 cut(s)	295, 384, 834
EcoT38I	GRGCYC	1 cut(s)	834
EgeI	GGCGCC	1 cut(s)	1551
EheI	GGCGCC	1 cut(s)	1551
FaeI	CATG	5 cut(s)	214, 1145, 1192, 1258, 1276
FalI	AAGNNNNNCTT	2 cut(s)	1044, 1076
FaqI	GGGAC	1 cut(s)	1409
FatI	CATG	5 cut(s)	210, 1141, 1188, 1254, 1272
FauI	CCCGC	1 cut(s)	520
FokI	GGATG	2 cut(s)	968, 1794
FriOI	GRGCYC	1 cut(s)	834
FspBI	CTAG	2 cut(s)	507, 1830
GlaI	GCGC	2 cut(s)	753, 1551
GsaI	CCCAGC	2 cut(s)	1396, 1978
GsuI	CTGGAG	3 cut(s)	818, 939, 971
HaeII	RGCGCY	1 cut(s)	1553
HapII	CCGG	7 cut(s)	516, 534, 548, 577, 632, 1553, 1953
HgaI	GACGC	5 cut(s)	131, 143, 478, 717, 1560
HhaI	GCGC	2 cut(s)	754, 1552
Hin1I	GRCGYC	4 cut(s)	123, 135, 728, 1550
Hin1II	CATG	5 cut(s)	214, 1145, 1192, 1258, 1276
Hin6I	GCGC	2 cut(s)	752, 1550
HinP1I	GCGC	2 cut(s)	752, 1550
HindIII	AAGCTT	1 cut(s)	1787
HinfI	GANTC	5 cut(s)	129, 161, 474, 1145, 1949
HpaII	CCGG	7 cut(s)	516, 534, 548, 577, 632, 1553, 1953
Hpy166II	GTNNAC	4 cut(s)	925, 1090, 1138, 1264
Hpy188I	TCNGA	7 cut(s)	271, 473, 499, 706, 1821, 1876, 1903
Hpy188III	TCNNGA	5 cut(s)	455, 553, 608, 918, 1811
Hpy8I	GTNNAC	4 cut(s)	925, 1090, 1138, 1264
Hpy99I	CGWCG	6 cut(s)	125, 137, 419, 599, 706, 733
HpyAV	CCTTC	8 cut(s)	88, 268, 679, 1078, 1312, 1632, 1818, 1831
HpyCH4III	ACNGT	4 cut(s)	599, 625, 1502, 1870
HpyCH4IV	ACGT	6 cut(s)	36, 573, 618, 696, 807, 1359
HpyCH4V	TGCA	3 cut(s)	1201, 1236, 1384
HpyF10VI	GCNNNNNNNGC	7 cut(s)	239, 655, 1342, 1361, 1495, 1568, 1889
HpyF3I	CTNAG	5 cut(s)	795, 858, 1025, 1176, 1818
HpySE526I	ACGT	6 cut(s)	36, 573, 618, 696, 807, 1359
Hsp92I	GRCGYC	4 cut(s)	123, 135, 728, 1550
Hsp92II	CATG	5 cut(s)	214, 1145, 1192, 1258, 1276
HspAI	GCGC	2 cut(s)	752, 1550
KasI	GGCGCC	1 cut(s)	1549
KroI	GCCGGC	1 cut(s)	515
KroNI	GCCGGC	1 cut(s)	517
Kzo9I	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
LguI	GCTCTTC	1 cut(s)	1014
LmnI	GCTCC	6 cut(s)	406, 634, 837, 863, 1284, 1555
Lsp1109I	GCAGC	3 cut(s)	1213, 1595, 1950
LweI	GCATC	2 cut(s)	546, 1892
MaeI	CTAG	2 cut(s)	507, 1830
MaeII	ACGT	6 cut(s)	36, 573, 618, 696, 807, 1359
MaeIII	GTNAC	7 cut(s)	502, 619, 779, 808, 904, 1541, 1572
MalI	GATC	8 cut(s)	273, 390, 453, 587, 803, 1056, 1685, 1815
MboI	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
MhlI	GDGCHC	2 cut(s)	834, 1500
MlsI	TGGCCA	1 cut(s)	1484
MluNI	TGGCCA	1 cut(s)	1484
Mly113I	GGCGCC	1 cut(s)	1550
MlyI	GAGTC	2 cut(s)	123, 155
MmeI	TCCRAC	5 cut(s)	108, 117, 348, 684, 1599
Mox20I	TGGCCA	1 cut(s)	1484
MroNI	GCCGGC	1 cut(s)	515
MscI	TGGCCA	1 cut(s)	1484
MseI	TTAA	2 cut(s)	1422, 1746
MslI	CAYNNNNRTG	2 cut(s)	1259, 1523
Msp20I	TGGCCA	1 cut(s)	1484
MspI	CCGG	7 cut(s)	516, 534, 548, 577, 632, 1553, 1953
MspR9I	CCNGG	5 cut(s)	297, 386, 578, 836, 1954
Mva1269I	GAATGC	2 cut(s)	1964, 1978
MvaI	CCWGG	3 cut(s)	297, 386, 836
MvnI	CGCG	1 cut(s)	1914
MwoI	GCNNNNNNNGC	7 cut(s)	239, 655, 1342, 1361, 1495, 1568, 1889
NaeI	GCCGGC	1 cut(s)	517
NarI	GGCGCC	1 cut(s)	1550
NciI	CCSGG	2 cut(s)	578, 1954
NdeII	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
NgoMIV	GCCGGC	1 cut(s)	515
NlaIII	CATG	5 cut(s)	214, 1145, 1192, 1258, 1276
NlaIV	GGNNCC	5 cut(s)	630, 865, 1286, 1397, 1551
NmeAIII	GCCGAG	1 cut(s)	159
NmuCI	GTSAC	6 cut(s)	502, 619, 779, 808, 904, 1572
NspI	RCATGY	1 cut(s)	1276
NspV	TTCGAA	3 cut(s)	1013, 1148, 1709
OliI	CACNNNNGTG	1 cut(s)	1523
PceI	AGGCCT	2 cut(s)	1642, 1828
PciSI	GCTCTTC	1 cut(s)	1014
PcsI	WCGNNNNNNNCGW	4 cut(s)	129, 141, 267, 615
PctI	GAATGC	2 cut(s)	1964, 1978
PdiI	GCCGGC	1 cut(s)	517
PfeI	GAWTC	3 cut(s)	474, 1145, 1949
PflFI	GACNNNGTC	1 cut(s)	1870
PflMI	CCANNNNNTGG	1 cut(s)	1405
PleI	GAGTC	2 cut(s)	123, 155
PluTI	GGCGCC	1 cut(s)	1553
PpsI	GAGTC	2 cut(s)	123, 155
Ppu21I	YACGTR	1 cut(s)	697
PpuMI	RGGWCCY	1 cut(s)	6
Psp124BI	GAGCTC	1 cut(s)	834
Psp5II	RGGWCCY	1 cut(s)	6
Psp6I	CCWGG	3 cut(s)	295, 384, 834
PspFI	CCCAGC	2 cut(s)	1392, 1974
PspGI	CCWGG	3 cut(s)	295, 384, 834
PspN4I	GGNNCC	5 cut(s)	630, 865, 1286, 1397, 1551
PspPI	GGNCC	7 cut(s)	6, 430, 510, 550, 1216, 1396, 1735
PspPPI	RGGWCCY	1 cut(s)	6
PstI	CTGCAG	1 cut(s)	1203
PstNI	CAGNNNCTG	2 cut(s)	1589, 1886
PsyI	GACNNNGTC	1 cut(s)	1870
RsaI	GTAC	4 cut(s)	173, 362, 926, 1265
RsaNI	GTAC	4 cut(s)	172, 361, 925, 1264
RseI	CAYNNNNRTG	2 cut(s)	1259, 1523
SacI	GAGCTC	1 cut(s)	834
SapI	GCTCTTC	1 cut(s)	1014
SaqAI	TTAA	2 cut(s)	1422, 1746
Sau3AI	GATC	8 cut(s)	271, 388, 451, 585, 801, 1054, 1683, 1813
Sau96I	GGNCC	7 cut(s)	6, 430, 510, 550, 1216, 1396, 1735
ScaI	AGTACT	2 cut(s)	173, 362
SchI	GAGTC	2 cut(s)	123, 155
ScrFI	CCNGG	5 cut(s)	297, 386, 578, 836, 1954
SduI	GDGCHC	2 cut(s)	834, 1500
SfaNI	GCATC	2 cut(s)	546, 1892
SfcI	CTRYAG	1 cut(s)	1199
SfoI	GGCGCC	1 cut(s)	1551
SfuI	TTCGAA	3 cut(s)	1013, 1148, 1709
SgrAI	CRCCGGYG	1 cut(s)	533
SinI	GGWCC	5 cut(s)	6, 550, 1216, 1396, 1735
SmiMI	CAYNNNNRTG	2 cut(s)	1259, 1523
SseBI	AGGCCT	2 cut(s)	1642, 1828
SspDI	GGCGCC	1 cut(s)	1549
SspMI	CTAG	2 cut(s)	507, 1830
SstI	GAGCTC	1 cut(s)	834
StuI	AGGCCT	2 cut(s)	1642, 1828
StyD4I	CCNGG	5 cut(s)	295, 384, 576, 834, 1952
TaaI	ACNGT	4 cut(s)	599, 625, 1502, 1870
TaiI	ACGT	6 cut(s)	39, 576, 621, 699, 810, 1362
TatI	WGTACW	3 cut(s)	171, 360, 924
TauI	GCSGC	7 cut(s)	186, 540, 1345, 1733, 1850, 1892, 1917
TfiI	GAWTC	3 cut(s)	474, 1145, 1949
Tru1I	TTAA	2 cut(s)	1422, 1746
Tru9I	TTAA	2 cut(s)	1422, 1746
TscAI	CASTG	6 cut(s)	784, 790, 1131, 1683, 1875, 1989
TseFI	GTSAC	6 cut(s)	502, 619, 779, 808, 904, 1572
TseI	GCWGC	3 cut(s)	1201, 1583, 1938
Tsp45I	GTSAC	6 cut(s)	502, 619, 779, 808, 904, 1572
TspDTI	ATGAA	4 cut(s)	972, 1032, 1400, 1850
TspGWI	ACGGA	3 cut(s)	154, 752, 1130
TspRI	CASTG	6 cut(s)	784, 790, 1131, 1683, 1875, 1989
Tth111I	GACNNNGTC	1 cut(s)	1870
Van91I	CCANNNNNTGG	1 cut(s)	1405
VpaK11BI	GGWCC	5 cut(s)	6, 550, 1216, 1396, 1735
XapI	RAATTY	5 cut(s)	419, 590, 759, 1166, 1210
XceI	RCATGY	1 cut(s)	1276
XcmI	CCANNNNNNNNNTGG	1 cut(s)	560
XspI	CTAG	2 cut(s)	507, 1830
ZrmI	AGTACT	2 cut(s)	173, 362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.