Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0010436

Physical Location & Seq

Genomic Coordinates Forward (+)

9632722 .. 9636405

Gene Structure 3684 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG129900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGAGGTCCTTACCTCTCCCCCTCCTCCTCCTCCTCCTCCTCTTCCACGTCCTCTCTCCTACTCTCGCCCTCGACTTCCTATTCAACTCCTTCTCCAACATCTCCAACGCCACCGACTTCACTCTCATCAACGACGCCAGACTCGACGCCTCCACCGTCCGCCTCACAAACGACTCCGTTCAGTGGTCCCTCGGCCGATTCTTCCACACCACCAAGCTCACCATGAGACCTAATTCCACCTCCACTTCCCTCGCTTCCTTTTCAACCTCCTTCGTCTTCTCCGATCTCCCCAATATCGCTTCCAGCCCAGGCTTCGGCCTCTGCTTCGTCCTCTCCAACTCCACCTCTCCCCCTAACGCCCTCGCCAGCCAGTACTTCGGCCTCTTCTCAAACGCCCAGGTTCAGGTCGCAGCTCCCTTACTCGCCGTCGAATTCGACACGGGCCGAAACACCGAGTTCAACGATCCCGACGGAAACCACATCGGAATCGACCTCAACAGGGTCATATCGGAGGTCACTAGGCCCGCCGGCTACTACAATTCCACCGGCGGCTTCGTTCCGGTTCAGATGCGGAGTGGCGAGAACGTCCGGACTTGGATCGAATTCGACGGTGATAATCTCGAAATCAACGTCACCGTGGCTCCGGCTAATCTGCCACGGCCTACTCTGCCTACGCTGAGCTTCAAAGACCCAAGGATTGCGAACTACGTGTCGTCCGAGATGTTCGTTGGGTTTTCGGCGTCGAAAACGGAGTGGATTGAGGCGCAGAGAATTTTGGCTTGGAGTTTCAGTGACACTGGGGTTGCTAAAGAGATCAACGTGACCAATTTGCCTGTCTTCAAGCTCGAGGCTTCTTCGAAATCCTTGCCTAAGGGAGCCATTGCTGGTATTACAATAGGTTGCGTTTTGTTTGTGGTGACTTTAGCTTATGGAGTGTACTTGTATTGGAGGAAGAAGAAGCTGGAGGATGAAGAAGATGATGAGATTGAGGATTGGGAGATGGAGTATTGGCCCCATCGATTTTCGAATGAAGAGCTGAGTGAGGCTACTGGTGGATTTTCGAAAGATCAGCTTTTGGGTTCTGGTGGATTTGGGAAGGTTTACAGAGGAGTTTTATCGAACAAGACGGAGATAGCAGTGAAATGTGTGAACCATGATTCGAAGCAGGGGTTGAGAGAATTTATGGCAGAGATTTCGAGCATGGGGAGACTGCAGCATAAGAATTTGGTCCAAATGCGAGGGTGGTGCAGAAAAGGAAACCAGCTCATGCTTGTGTATGACTACATGCCTAATGGGAGCCTCAACAGGTGGATTTTCGACAGGCCGAAGAAGGTTTTGGGGTGGGGGCAACGGCGGCGTGTGTTGGCAGACGTGGCGGAGGGGCTGAACTATCTGCACCACGGCTGGGACCAAGTGGTGGTTCATAGAGACATTAAGTCGAGCAATATATTGCTGGACTTGGAAATGAGAGGCAGGCTTGGTGATTTTGGATTGGCCAAGCTGTATGAGCACGGTGAAGTGCCTAATACCACTCGTGTGGTCGGCACGATGGGGTACTTGGCGCCGGAGCTGGCTACCATAGCGTCACCAACAGCAGCGACTGATGTGTATAGCTTTGGAGTGGTGTTGTTGGAAGTGGCGTGTGGAAGGAGGCCTATTGAAATGGGGGCAGAGGAGGAGGAGGAGGCAGTGCTGATCGATTGGGTGAAAGAGTTGTATTCGAAAGGGAGGGTGAGAGAGGCGGCGGACCAGAGAATTAAAGGGGAGTATGATGAGGAGGAGATGGAGGTTGTATTGAAGCTTGGGTTGGCTTGTTGTCATCCTGATCCTCAGAGAAGGCCTAGCATGAAGGAAATTGCGGCAATTTTGGTTGGCGAGACAGTGTCCGAGCCAGCACCTGCCGCATTGTTATCAGAACTGGCACGCGGCGAGGGTGGTGATGGGGCCGGCAGCGAGGAAGAATCCGGGGAAGTGGCATTCCAACCCCAGCATTCAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase

Protein Analysis

666

Amino Acids

73.72

Weight (kDa)

5.13

Isoelectric Point (pI)

41.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	24 - 277	7.8e-60	Legume lectin domain
Pkinase	PF00069	354 - 620	1.8e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	356 - 622	4.2e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15530
fragaria_vesca	FvH4_5g06170
malus_domestica	MD06G1166300.v1.1
prunus_persica	Prupe.5G166300_v2.0.a1 Prupe.5G166300_v2.0.a1
pyrus_communis	pycom06g14890 pycom10g29130 pycom14g14370
rosa_chinensis	RchiOBHm_Chr7g0192631
rosa_laevigata	RLG00000004340 RLG00000004343 RLG00000036720
rosa_multiflora	Rmu_sc0002040.1_g000001 Rmu_sc0035522.1_g000002
rosa_roxburghii	Rroxscaffold_3G00262790 Rroxscaffold_3G00262820
rosa_rugosa	Rorug07G0003200 Rorug07G0003300
rosa_samantha	Rh7BG129900 Rh7DG130900
rosa_wichuraiana	Rw7G010970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1906
Acc36I	ACCTGC	1 cut(s)	1906
AccB1I	GGYRCC	1 cut(s)	1561
AccB7I	CCANNNNNTGG	1 cut(s)	1417
AccII	CGCG	1 cut(s)	1926
AccIII	TCCGGA	1 cut(s)	588
AclWI	GGATC	3 cut(s)	458, 605, 1820
AcoI	YGGCCR	2 cut(s)	193, 1494
AcsI	RAATTY	5 cut(s)	431, 602, 771, 1178, 1222
AcyI	GRCGYC	4 cut(s)	135, 147, 740, 1562
AfaI	GTAC	3 cut(s)	374, 938, 1556
AfiI	CCNNNNNNNGG	6 cut(s)	183, 314, 403, 499, 1405, 1417
AflIII	ACRYGT	1 cut(s)	708
AgsI	TTSAA	7 cut(s)	85, 264, 460, 685, 841, 1661, 1798
AhdI	GACNNNNNGTC	1 cut(s)	1435
AjiI	CACGTC	2 cut(s)	49, 1372
AjnI	CCWGG	2 cut(s)	307, 396
AjuI	GAANNNNNNNTTGG	8 cut(s)	763, 795, 1319, 1351, 1404, 1436, 1790, 1822
AleI	CACNNNNGTG	1 cut(s)	1535
Alw21I	GWGCWC	1 cut(s)	1512
Alw26I	GTCTC	4 cut(s)	220, 1201, 1422, 1871
AlwI	GGATC	3 cut(s)	458, 605, 1820
AlwNI	CAGNNNCTG	2 cut(s)	1601, 1898
Ama87I	CYCGRG	1 cut(s)	845
Aor13HI	TCCGGA	1 cut(s)	588
ApeKI	GCWGC	4 cut(s)	410, 1213, 1595, 1950
ApoI	RAATTY	5 cut(s)	431, 602, 771, 1178, 1222
ArsI	GACNNNNNNTTYG	4 cut(s)	615, 647, 695, 727
AspLEI	GCGC	2 cut(s)	766, 1564
AspS9I	GGNCC	9 cut(s)	6, 186, 442, 522, 1011, 1228, 1408, 1747, 1944
AsuC2I	CCSGG	1 cut(s)	1966
AsuII	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
AvaI	CYCGRG	1 cut(s)	845
AvaII	GGWCC	5 cut(s)	6, 186, 1228, 1408, 1747
AxyI	CCTNAGG	1 cut(s)	870
BalI	TGGCCA	1 cut(s)	1496
BanI	GGYRCC	1 cut(s)	1561
BauI	CACGAG	1 cut(s)	1533
BbsI	GAAGAC	2 cut(s)	268, 829
Bbv12I	GWGCWC	1 cut(s)	1512
BbvI	GCAGC	4 cut(s)	422, 1225, 1607, 1962
BccI	CCATC	5 cut(s)	994, 1023, 1543, 1777, 1934
BceAI	ACGGC	4 cut(s)	410, 674, 1367, 1417
BcgI	CGANNNNNNTGC	6 cut(s)	847, 881, 1176, 1210, 1227, 1261
BciT130I	CCWGG	2 cut(s)	309, 398
BcnI	CCSGG	1 cut(s)	1966
BcoDI	GTCTC	4 cut(s)	220, 1201, 1422, 1871
BfaI	CTAG	2 cut(s)	519, 1842
BfmI	CTRYAG	1 cut(s)	1211
BfoI	RGCGCY	1 cut(s)	1565
BfuAI	ACCTGC	1 cut(s)	1906
BlpI	GCTNAGC	1 cut(s)	677
BmcAI	AGTACT	1 cut(s)	374
Bme1390I	CCNGG	3 cut(s)	309, 398, 1966
Bme18I	GGWCC	5 cut(s)	6, 186, 1228, 1408, 1747
BmeRI	GACNNNNNGTC	1 cut(s)	1435
BmeT110I	CYCGRG	1 cut(s)	845
BmgBI	CACGTC	2 cut(s)	49, 1372
BmgT120I	GGNCC	9 cut(s)	6, 186, 442, 522, 1011, 1228, 1408, 1747, 1944
BmiI	GGNNCC	8 cut(s)	188, 642, 877, 1013, 1298, 1409, 1563, 1945
BmrFI	CCNGG	3 cut(s)	309, 398, 1966
BmrI	ACTGGG	1 cut(s)	807
BmsI	GCATC	1 cut(s)	558
BmuI	ACTGGG	1 cut(s)	807
BpiI	GAAGAC	2 cut(s)	268, 829
BpmI	CTGGAG	1 cut(s)	983
Bpu1102I	GCTNAGC	1 cut(s)	677
Bpu14I	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
BpuMI	CCSGG	1 cut(s)	1966
Bsa29I	ATCGAT	2 cut(s)	1018, 1698
BsaAI	YACGTR	1 cut(s)	709
BsaHI	GRCGYC	4 cut(s)	135, 147, 740, 1562
BsaI	GGTCTC	1 cut(s)	220
BsaJI	CCNNGG	8 cut(s)	190, 307, 396, 636, 656, 692, 1399, 1965
BsaWI	WCCGGW	2 cut(s)	559, 588
BsaXI	ACNNNNNCTCC	8 cut(s)	77, 107, 625, 655, 775, 805, 989, 1019
Bsc4I	CCNNNNNNNGG	6 cut(s)	183, 314, 403, 499, 1405, 1417
Bse118I	RCCGGY	3 cut(s)	527, 545, 1946
Bse1I	ACTGG	4 cut(s)	370, 802, 1054, 1923
Bse21I	CCTNAGG	1 cut(s)	870
Bse3DI	GCAATG	1 cut(s)	879
BseAI	TCCGGA	1 cut(s)	588
BseBI	CCWGG	2 cut(s)	309, 398
BseCI	ATCGAT	2 cut(s)	1018, 1698
BseDI	CCNNGG	8 cut(s)	190, 307, 396, 636, 656, 692, 1399, 1965
BseGI	GGATG	2 cut(s)	973, 1819
BseLI	CCNNNNNNNGG	6 cut(s)	183, 314, 403, 499, 1405, 1417
BseMI	GCAATG	1 cut(s)	879
BseMII	CTCAG	3 cut(s)	668, 1028, 1844
BseNI	ACTGG	4 cut(s)	370, 802, 1054, 1923
BseX3I	CGGCCG	1 cut(s)	193
BseXI	GCAGC	4 cut(s)	422, 1225, 1607, 1962
BseYI	CCCAGC	2 cut(s)	1404, 1986
BsgI	GTGCAG	2 cut(s)	1267, 1379
Bsh1236I	CGCG	1 cut(s)	1926
Bsh1285I	CGRYCG	1 cut(s)	196
BshNI	GGYRCC	1 cut(s)	1561
BshVI	ATCGAT	2 cut(s)	1018, 1698
BsiEI	CGRYCG	1 cut(s)	196
BsiHKAI	GWGCWC	1 cut(s)	1512
BsiHKCI	CYCGRG	1 cut(s)	845
BsiSI	CCGG	8 cut(s)	528, 546, 560, 589, 644, 1565, 1947, 1965
BslFI	GGGAC	2 cut(s)	172, 1421
BslI	CCNNNNNNNGG	6 cut(s)	183, 314, 403, 499, 1405, 1417
BsmAI	GTCTC	4 cut(s)	220, 1201, 1422, 1871
BsmFI	GGGAC	2 cut(s)	172, 1421
BsmI	GAATGC	2 cut(s)	1976, 1990
Bso31I	GGTCTC	1 cut(s)	220
BsoBI	CYCGRG	1 cut(s)	845
Bsp119I	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
Bsp1286I	GDGCHC	1 cut(s)	1512
Bsp13I	TCCGGA	1 cut(s)	588
Bsp143I	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
Bsp1720I	GCTNAGC	1 cut(s)	677
BspCNI	CTCAG	3 cut(s)	669, 1029, 1843
BspDI	ATCGAT	2 cut(s)	1018, 1698
BspEI	TCCGGA	1 cut(s)	588
BspFNI	CGCG	1 cut(s)	1926
BspLI	GGNNCC	8 cut(s)	188, 642, 877, 1013, 1298, 1409, 1563, 1945
BspMAI	CTGCAG	1 cut(s)	1215
BspMI	ACCTGC	1 cut(s)	1906
BspPI	GGATC	3 cut(s)	458, 605, 1820
BspQI	GCTCTTC	1 cut(s)	1026
BspT104I	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
BspT107I	GGYRCC	1 cut(s)	1561
BspTNI	GGTCTC	1 cut(s)	220
BsrDI	GCAATG	1 cut(s)	879
BsrFI	RCCGGY	3 cut(s)	527, 545, 1946
BsrI	ACTGG	4 cut(s)	370, 802, 1054, 1923
BssAI	RCCGGY	3 cut(s)	527, 545, 1946
BssECI	CCNNGG	8 cut(s)	190, 307, 396, 636, 656, 692, 1399, 1965
BssMI	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
BssNI	GRCGYC	4 cut(s)	135, 147, 740, 1562
BssSI	CACGAG	1 cut(s)	1533
BssT1I	CCWWGG	1 cut(s)	692
Bst2BI	CACGAG	1 cut(s)	1533
Bst2UI	CCWGG	2 cut(s)	309, 398
Bst4CI	ACNGT	5 cut(s)	157, 611, 637, 1514, 1882
Bst6I	CTCTTC	3 cut(s)	47, 389, 1026
BstACI	GRCGYC	4 cut(s)	135, 147, 740, 1562
BstBAI	YACGTR	1 cut(s)	709
BstBI	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
BstC8I	GCNNGC	8 cut(s)	367, 525, 529, 1475, 1572, 1893, 1924, 1948
BstDEI	CTNAG	4 cut(s)	677, 870, 1037, 1830
BstDSI	CCRYGG	3 cut(s)	636, 656, 1399
BstF5I	GGATG	2 cut(s)	973, 1819
BstFNI	CGCG	1 cut(s)	1926
BstH2I	RGCGCY	1 cut(s)	1565
BstHHI	GCGC	2 cut(s)	766, 1564
BstKTI	GATC	7 cut(s)	286, 466, 600, 816, 1069, 1698, 1828
BstMAI	GTCTC	4 cut(s)	220, 1201, 1422, 1871
BstMBI	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
BstMCI	CGRYCG	1 cut(s)	196
BstMWI	GCNNNNNNNGC	6 cut(s)	667, 1354, 1373, 1507, 1580, 1901
BstNI	CCWGG	2 cut(s)	309, 398
BstNSI	RCATGY	1 cut(s)	1288
BstSCI	CCNGG	3 cut(s)	307, 396, 1964
BstSFI	CTRYAG	1 cut(s)	1211
BstUI	CGCG	1 cut(s)	1926
BstV1I	GCAGC	4 cut(s)	422, 1225, 1607, 1962
BstV2I	GAAGAC	2 cut(s)	268, 829
BstXI	CCANNNNNNTGG	1 cut(s)	1537
BstZI	CGGCCG	1 cut(s)	193
Bsu15I	ATCGAT	2 cut(s)	1018, 1698
Bsu36I	CCTNAGG	1 cut(s)	870
BsuTUI	ATCGAT	2 cut(s)	1018, 1698
BtgI	CCRYGG	3 cut(s)	636, 656, 1399
BtrI	CACGTC	2 cut(s)	49, 1372
BtsCI	GGATG	2 cut(s)	973, 1819
BtsI	GCAGTG	2 cut(s)	1143, 1695
BtsIMutI	CAGTG	7 cut(s)	188, 795, 796, 1143, 1695, 1887, 2001
BveI	ACCTGC	1 cut(s)	1906
Cac8I	GCNNGC	8 cut(s)	367, 525, 529, 1475, 1572, 1893, 1924, 1948
CaiI	CAGNNNCTG	2 cut(s)	1601, 1898
CfoI	GCGC	2 cut(s)	766, 1564
Cfr10I	RCCGGY	3 cut(s)	527, 545, 1946
Cfr13I	GGNCC	9 cut(s)	6, 186, 442, 522, 1011, 1228, 1408, 1747, 1944
ClaI	ATCGAT	2 cut(s)	1018, 1698
CseI	GACGC	4 cut(s)	143, 155, 729, 1572
Csp6I	GTAC	3 cut(s)	373, 937, 1555
CviAII	CATG	6 cut(s)	223, 1154, 1201, 1267, 1285, 1846
CviQI	GTAC	3 cut(s)	373, 937, 1555
DdeI	CTNAG	4 cut(s)	677, 870, 1037, 1830
DinI	GGCGCC	1 cut(s)	1563
DpnI	GATC	7 cut(s)	285, 465, 599, 815, 1068, 1697, 1827
DpnII	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
DriI	GACNNNNNGTC	1 cut(s)	1435
EaeI	YGGCCR	2 cut(s)	193, 1494
EagI	CGGCCG	1 cut(s)	193
Eam1104I	CTCTTC	3 cut(s)	47, 389, 1026
Eam1105I	GACNNNNNGTC	1 cut(s)	1435
EarI	CTCTTC	3 cut(s)	47, 389, 1026
EciI	GGCGGA	3 cut(s)	149, 1391, 1760
EclXI	CGGCCG	1 cut(s)	193
Eco130I	CCWWGG	1 cut(s)	692
Eco147I	AGGCCT	2 cut(s)	1654, 1840
Eco31I	GGTCTC	1 cut(s)	220
Eco47I	GGWCC	5 cut(s)	6, 186, 1228, 1408, 1747
Eco52I	CGGCCG	1 cut(s)	193
Eco81I	CCTNAGG	1 cut(s)	870
Eco88I	CYCGRG	1 cut(s)	845
EcoO109I	RGGNCCY	1 cut(s)	6
EcoRI	GAATTC	2 cut(s)	431, 602
EcoRII	CCWGG	2 cut(s)	307, 396
EcoT14I	CCWWGG	1 cut(s)	692
EgeI	GGCGCC	1 cut(s)	1563
EheI	GGCGCC	1 cut(s)	1563
ErhI	CCWWGG	1 cut(s)	692
FaeI	CATG	6 cut(s)	226, 1157, 1204, 1270, 1288, 1849
FalI	AAGNNNNNCTT	2 cut(s)	1056, 1088
FaqI	GGGAC	2 cut(s)	172, 1421
FatI	CATG	6 cut(s)	222, 1153, 1200, 1266, 1284, 1845
FauI	CCCGC	1 cut(s)	532
FokI	GGATG	2 cut(s)	980, 1806
FspBI	CTAG	2 cut(s)	519, 1842
GlaI	GCGC	2 cut(s)	765, 1563
GsaI	CCCAGC	2 cut(s)	1408, 1990
GsuI	CTGGAG	1 cut(s)	983
HaeII	RGCGCY	1 cut(s)	1565
HapII	CCGG	8 cut(s)	528, 546, 560, 589, 644, 1565, 1947, 1965
HgaI	GACGC	4 cut(s)	143, 155, 729, 1572
HhaI	GCGC	2 cut(s)	766, 1564
Hin1I	GRCGYC	4 cut(s)	135, 147, 740, 1562
Hin1II	CATG	6 cut(s)	226, 1157, 1204, 1270, 1288, 1849
Hin6I	GCGC	2 cut(s)	764, 1562
HinP1I	GCGC	2 cut(s)	764, 1562
HindIII	AAGCTT	1 cut(s)	1799
HinfI	GANTC	6 cut(s)	141, 173, 198, 486, 1157, 1961
HpaII	CCGG	8 cut(s)	528, 546, 560, 589, 644, 1565, 1947, 1965
Hpy166II	GTNNAC	3 cut(s)	937, 1102, 1150
Hpy188I	TCNGA	8 cut(s)	283, 485, 511, 567, 718, 1833, 1888, 1915
Hpy188III	TCNNGA	4 cut(s)	467, 589, 620, 1823
Hpy8I	GTNNAC	3 cut(s)	937, 1102, 1150
Hpy99I	CGWCG	6 cut(s)	137, 149, 431, 473, 611, 745
HpyAV	CCTTC	7 cut(s)	100, 280, 1090, 1324, 1641, 1830, 1843
HpyCH4III	ACNGT	5 cut(s)	157, 611, 637, 1514, 1882
HpyCH4IV	ACGT	6 cut(s)	48, 585, 630, 708, 819, 1371
HpyCH4V	TGCA	3 cut(s)	1213, 1248, 1396
HpyF10VI	GCNNNNNNNGC	6 cut(s)	667, 1354, 1373, 1507, 1580, 1901
HpyF3I	CTNAG	4 cut(s)	677, 870, 1037, 1830
HpySE526I	ACGT	6 cut(s)	48, 585, 630, 708, 819, 1371
Hsp92I	GRCGYC	4 cut(s)	135, 147, 740, 1562
Hsp92II	CATG	6 cut(s)	226, 1157, 1204, 1270, 1288, 1849
HspAI	GCGC	2 cut(s)	764, 1562
KasI	GGCGCC	1 cut(s)	1561
Kpn2I	TCCGGA	1 cut(s)	588
KroI	GCCGGC	2 cut(s)	527, 1946
KroNI	GCCGGC	2 cut(s)	529, 1948
Kzo9I	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
LguI	GCTCTTC	1 cut(s)	1026
LmnI	GCTCC	5 cut(s)	418, 646, 875, 1296, 1567
Lsp1109I	GCAGC	4 cut(s)	422, 1225, 1607, 1962
LweI	GCATC	1 cut(s)	558
MaeI	CTAG	2 cut(s)	519, 1842
MaeII	ACGT	6 cut(s)	48, 585, 630, 708, 819, 1371
MaeIII	GTNAC	6 cut(s)	514, 631, 791, 820, 916, 1584
MalI	GATC	7 cut(s)	285, 465, 599, 815, 1068, 1697, 1827
MboI	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
MhlI	GDGCHC	1 cut(s)	1512
MlsI	TGGCCA	1 cut(s)	1496
MluNI	TGGCCA	1 cut(s)	1496
Mly113I	GGCGCC	1 cut(s)	1562
MlyI	GAGTC	2 cut(s)	135, 167
MmeI	TCCRAC	4 cut(s)	120, 129, 360, 1611
Mox20I	TGGCCA	1 cut(s)	1496
MroI	TCCGGA	1 cut(s)	588
MroNI	GCCGGC	2 cut(s)	527, 1946
MscI	TGGCCA	1 cut(s)	1496
MseI	TTAA	2 cut(s)	1434, 1758
MslI	CAYNNNNRTG	2 cut(s)	1271, 1535
Msp20I	TGGCCA	1 cut(s)	1496
MspI	CCGG	8 cut(s)	528, 546, 560, 589, 644, 1565, 1947, 1965
MspR9I	CCNGG	3 cut(s)	309, 398, 1966
Mva1269I	GAATGC	2 cut(s)	1976, 1990
MvaI	CCWGG	2 cut(s)	309, 398
MvnI	CGCG	1 cut(s)	1926
MwoI	GCNNNNNNNGC	6 cut(s)	667, 1354, 1373, 1507, 1580, 1901
NaeI	GCCGGC	2 cut(s)	529, 1948
NarI	GGCGCC	1 cut(s)	1562
NciI	CCSGG	1 cut(s)	1966
NdeII	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
NgoMIV	GCCGGC	2 cut(s)	527, 1946
NlaIII	CATG	6 cut(s)	226, 1157, 1204, 1270, 1288, 1849
NlaIV	GGNNCC	8 cut(s)	188, 642, 877, 1013, 1298, 1409, 1563, 1945
NmeAIII	GCCGAG	1 cut(s)	171
NmuCI	GTSAC	6 cut(s)	514, 631, 791, 820, 916, 1584
NspI	RCATGY	1 cut(s)	1288
NspV	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
OliI	CACNNNNGTG	1 cut(s)	1535
PaeR7I	CTCGAG	1 cut(s)	845
PaqCI	CACCTGC	1 cut(s)	1906
PceI	AGGCCT	2 cut(s)	1654, 1840
PciSI	GCTCTTC	1 cut(s)	1026
PcsI	WCGNNNNNNNCGW	5 cut(s)	141, 153, 279, 627, 714
PctI	GAATGC	2 cut(s)	1976, 1990
PdiI	GCCGGC	2 cut(s)	529, 1948
PfeI	GAWTC	4 cut(s)	198, 486, 1157, 1961
PflFI	GACNNNGTC	1 cut(s)	1882
PflMI	CCANNNNNTGG	1 cut(s)	1417
PleI	GAGTC	2 cut(s)	135, 167
PluTI	GGCGCC	1 cut(s)	1565
PpsI	GAGTC	2 cut(s)	135, 167
Ppu21I	YACGTR	1 cut(s)	709
PpuMI	RGGWCCY	1 cut(s)	6
Psp5II	RGGWCCY	1 cut(s)	6
Psp6I	CCWGG	2 cut(s)	307, 396
PspFI	CCCAGC	2 cut(s)	1404, 1986
PspGI	CCWGG	2 cut(s)	307, 396
PspN4I	GGNNCC	8 cut(s)	188, 642, 877, 1013, 1298, 1409, 1563, 1945
PspPI	GGNCC	9 cut(s)	6, 186, 442, 522, 1011, 1228, 1408, 1747, 1944
PspPPI	RGGWCCY	1 cut(s)	6
PspXI	VCTCGAGB	1 cut(s)	845
PstI	CTGCAG	1 cut(s)	1215
PstNI	CAGNNNCTG	2 cut(s)	1601, 1898
PsyI	GACNNNGTC	1 cut(s)	1882
RsaI	GTAC	3 cut(s)	374, 938, 1556
RsaNI	GTAC	3 cut(s)	373, 937, 1555
RseI	CAYNNNNRTG	2 cut(s)	1271, 1535
SapI	GCTCTTC	1 cut(s)	1026
SaqAI	TTAA	2 cut(s)	1434, 1758
Sau3AI	GATC	7 cut(s)	283, 463, 597, 813, 1066, 1695, 1825
Sau96I	GGNCC	9 cut(s)	6, 186, 442, 522, 1011, 1228, 1408, 1747, 1944
ScaI	AGTACT	1 cut(s)	374
SchI	GAGTC	2 cut(s)	135, 167
ScrFI	CCNGG	3 cut(s)	309, 398, 1966
SduI	GDGCHC	1 cut(s)	1512
SfaNI	GCATC	1 cut(s)	558
SfcI	CTRYAG	1 cut(s)	1211
SfoI	GGCGCC	1 cut(s)	1563
Sfr274I	CTCGAG	1 cut(s)	845
SfuI	TTCGAA	5 cut(s)	857, 1025, 1061, 1160, 1721
SgrAI	CRCCGGYG	1 cut(s)	545
SinI	GGWCC	5 cut(s)	6, 186, 1228, 1408, 1747
SlaI	CTCGAG	1 cut(s)	845
SmiMI	CAYNNNNRTG	2 cut(s)	1271, 1535
SmlI	CTYRAG	1 cut(s)	845
SmoI	CTYRAG	1 cut(s)	845
SseBI	AGGCCT	2 cut(s)	1654, 1840
SspDI	GGCGCC	1 cut(s)	1561
SspMI	CTAG	2 cut(s)	519, 1842
StuI	AGGCCT	2 cut(s)	1654, 1840
StyD4I	CCNGG	3 cut(s)	307, 396, 1964
StyI	CCWWGG	1 cut(s)	692
TaaI	ACNGT	5 cut(s)	157, 611, 637, 1514, 1882
TaiI	ACGT	6 cut(s)	51, 588, 633, 711, 822, 1374
TatI	WGTACW	2 cut(s)	372, 936
TauI	GCSGC	6 cut(s)	552, 1357, 1745, 1862, 1904, 1929
TfiI	GAWTC	4 cut(s)	198, 486, 1157, 1961
Tru1I	TTAA	2 cut(s)	1434, 1758
Tru9I	TTAA	2 cut(s)	1434, 1758
TscAI	CASTG	7 cut(s)	188, 796, 802, 1143, 1695, 1887, 2001
TseFI	GTSAC	6 cut(s)	514, 631, 791, 820, 916, 1584
TseI	GCWGC	4 cut(s)	410, 1213, 1595, 1950
Tsp45I	GTSAC	6 cut(s)	514, 631, 791, 820, 916, 1584
TspDTI	ATGAA	4 cut(s)	984, 1044, 1412, 1862
TspGWI	ACGGA	4 cut(s)	166, 486, 764, 1142
TspRI	CASTG	7 cut(s)	188, 796, 802, 1143, 1695, 1887, 2001
Tth111I	GACNNNGTC	1 cut(s)	1882
Van91I	CCANNNNNTGG	1 cut(s)	1417
VpaK11BI	GGWCC	5 cut(s)	6, 186, 1228, 1408, 1747
XapI	RAATTY	5 cut(s)	431, 602, 771, 1178, 1222
XceI	RCATGY	1 cut(s)	1288
XhoI	CTCGAG	1 cut(s)	845
XspI	CTAG	2 cut(s)	519, 1842
ZrmI	AGTACT	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.