Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0004643

Physical Location & Seq

Genomic Coordinates Reverse (-)

63177424 .. 63181242

Gene Structure 3819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004864

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGTCGACCACCACCACCGACGGCCTTCCTCTTCACACCCACAAACACTCTCTTCGCAGTCCCATCAACCGCCTCTTCGTTCTAATTTACTGCTGCGCCATCCTAGCCTTGCTCTATCACCACACTCTCTCCCTCCTCCACTCGGCAACCCTGACCTCCTTCTTCATCACCCTCGCCCTCCTCATCTCCGACTCTATCCTCGCTTTTTTGAACATCACCACGCAAGCTTTCCGAATGAAGCCCATCTACCGCAAAGAATACCCCGAAAACCTCAAAAGAGTTCTTCGAAAAGCCGACTTCCCGGCACTTGATGTGTTCATATGCACTGCCGATCCCTACAAGGAGCCTCCGATGAACGTCGTCAACACGGCGTTGTCGGTGATGGGTTATGATTATCCGACGGAGAAGGTGTCAGTGTATGTTTCCGATGACGGAGGATCGGCTCTAACTCTGTTTGCGTTCATGGAGGCTGCAAAGTTTGCAAGGCACTGGTTACCTTTCTGCAGGGAGAACAACATAGTGGAAAGGTGTCCAGAAGCTTTTTTCCAAATGGACTACTGTAGGTTTTCTGAGGCTGAGGAAATTAAGAATATGTACCAAGGCATGAAAGTGAGAGTGGACAATGTAATCGAGAGAGGCAAAGTAGACAGTGAATATGTAACCGGAGAAAGGGAAACTCAGGCTTTTAGCAAATGGACCGATGGATTTACCCGGCGAGATCATCCTACAGTCATTCAGGTTTTGGCGGACAGTAGCAAAGATAGAGATATCACAGATAATGTTATGCCAAACTTAATCTATGTCTCTAGAGAAAAAAGCAGGGAATCAGAGCATAACTTTAAAGCTGGTGCCCTTAACGTCCTTATTCGAGTTTCAGCTGTCATGACCAATGCGCCAATAGTCTTAACCCAAGACTGTGACATGTACTCCAATGACCCTCAAACGCCTTCTCGTGCGCTATGCTACTTATCGGATCCTAAACTTCAATCCAAATTAGGATATGTGCAGTTTCCGCAGCGATTTCGCGGAATCAACAAGAATGACATATATGGATGTGAACACAAGTGTTTGTTTGTGATTAATCCTGAGGGAATGGATGGGGTTTCGGGGCCAAGTTATGTGGGAACAGGATGCTTTTTCAATAGGCGAGTTTTCTTCGGAGGTCCGTCACAGTTGTTATCACCTGAAATTCCTGAATTAGCACCAGATCATGTGGTGGACGAGCAGCTCATTCAGTCTACTGAGGTCTTGGAGTTGGCACATTCTGTTGCGGCTTGCAATTATGAGAATAATACCGATTGGGGATGGAAGATTGGTGTAAGATACGGCTCTCTGGTGGAGGACTACTTCACTGGTTATCGTTTGCAATGTGAAGGATGGAAATCTGTATTCTGCAATCCTGCTAGGGCAGCATTTTGTGGAGATGCCCCAATCAACCTTGTTGATGTGCTCAATCAAACCAAGCGATGGACCATAGGCCTCCTTGAGGTTGCTTTCTCTAAATATAGTCCAATTACGTTTGGCATTCGGTCCATGGGCCTTTTGATGGGCCTTTCATATGCTCACTATGCATTTTGGCCCATTTGGTCAATTCCAATCACGGTTTATGCCTTCCTCCCCCAGCTAGCTCTCCTCAATGGAATCAACATCTTTCCCAAGGTCTCGGAGCCATGGTTTCTCTTGTACGTCTTCCTTTTCACTGGATCCTACATCCAAAACTGCCTAGACTTTGTGGTAGAAGGAGGAACATTCCCAAAGTGGTGGAATGACCAAAGAATGTGGATGGTTAGGGCACTCTCATCCTTCTCGTTTGGATCCATAGAGTACCTTCTCAAGTCCTTGGGCATTTCCACCCATGGGTTCAATGTGACTAGCAAAGTCCTTGATGAAGACCAAAGCAAAAGATATGACCAAGGGATCTTTGAGTTTGGAGTCGCATCACCCATGTTTGTGCCTCTAACATCGGCTGCCATTGTCAACTTGGCTGCATTTGCTTGGGGACATGTAGAGGCTTTCAAAGGCAGCAATGGCTTGGAGGGGATGTTCTTGCAGATGTTTATAGCTGGTTTTGGCGTTGTGAATTGTATACCAATTTATGAAGCCATCATCAGTAGGAGTGACAAAGGGAGAATTCCTACAAAAACGACTATGGTTTCATTACTCTTAGCTTTTGCTCTTTATGTAGCGGCTTATGTTACTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

735

Amino Acids

82.84

Weight (kDa)

6.14

Isoelectric Point (pI)

36.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	103 - 387	6.1e-84	Cellulose synthase
Cellulose_synt	PF03552	414 - 726	3.4e-55	Cellulose synthase
Glyco_trans_2_3	PF13632	442 - 537	1.1e-07	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23990 AT4G23990 AT4G24000 AT4G24000 AT4G24010
fragaria_vesca	FvH4_5g11680
malus_domestica	MD14G1132000.v1.1 MD14G1132200.v1.1 MD14G1132300.v1.1
prunus_persica	Prupe.5G123500_v2.0.a1 Prupe.5G123600_v2.0.a1 Prupe.5G123700_v2.0.a1 Prupe.5G123800_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1
pyrus_communis	pycom06g10420
rosa_chinensis	RchiOBHm_Chr7g0186101
rosa_laevigata	RLG00000004864
rosa_multiflora	Rmu_co8339917.1_g000001 Rmu_sc0000194.1_g000028
rosa_roxburghii	Rroxscaffold_3G00268430
rosa_rugosa	Rorug06G0472200
rosa_samantha	Rh7AG069600 Rh7BG085500 Rh7CG078600 Rh7DG078600
rosa_wichuraiana	Rw7G006540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	1 cut(s)	1467
AccI	GTMKAC	4 cut(s)	5, 645, 1238, 2086
AccII	CGCG	1 cut(s)	1026
AciI	CCGC	7 cut(s)	70, 250, 746, 1013, 1026, 1271, 2186
AclWI	GGATC	9 cut(s)	326, 445, 968, 981, 1698, 1711, 1809, 1822, 1925
AcsI	RAATTY	2 cut(s)	1188, 2130
AfaI	GTAC	4 cut(s)	596, 926, 1685, 1826
AfiI	CCNNNNNNNGG	6 cut(s)	142, 669, 1467, 1486, 1546, 1857
AflIII	ACRYGT	2 cut(s)	921, 2002
AgsI	TTSAA	5 cut(s)	211, 986, 1141, 1864, 2017
AloI	GAACNNNNNNTCC	2 cut(s)	2027, 2059
AluBI	AGCT	9 cut(s)	227, 539, 845, 878, 1228, 1624, 1628, 2063, 2168
AluI	AGCT	9 cut(s)	227, 539, 845, 878, 1228, 1624, 1628, 2063, 2168
Alw21I	GWGCWC	1 cut(s)	1452
Alw26I	GTCTC	2 cut(s)	808, 1666
AlwI	GGATC	9 cut(s)	326, 445, 968, 981, 1698, 1711, 1809, 1822, 1925
AoxI	GGCC	6 cut(s)	22, 1109, 1477, 1537, 1549, 1577
ApeKI	GCWGC	8 cut(s)	93, 470, 1015, 1225, 1409, 1967, 1985, 2022
ApoI	RAATTY	2 cut(s)	1188, 2130
AseI	ATTAAT	1 cut(s)	1080
AspLEI	GCGC	3 cut(s)	98, 895, 958
AspS9I	GGNCC	8 cut(s)	696, 1109, 1163, 1470, 1530, 1537, 1549, 1578
AsuC2I	CCSGG	2 cut(s)	302, 712
AsuHPI	GGTGA	6 cut(s)	110, 160, 208, 391, 1173, 1932
AsuII	TTCGAA	1 cut(s)	286
AsuNHI	GCTAGC	1 cut(s)	1624
AvaII	GGWCC	4 cut(s)	696, 1163, 1470, 1530
AxyI	CCTNAGG	1 cut(s)	1086
BaeGI	GKGCMC	2 cut(s)	853, 1795
BamHI	GGATCC	3 cut(s)	973, 1703, 1814
BanI	GGYRCC	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	230, 262
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	2 cut(s)	1681, 1896
Bbv12I	GWGCWC	1 cut(s)	1452
BbvCI	CCTCAGC	1 cut(s)	576
BbvI	GCAGC	8 cut(s)	80, 457, 1027, 1237, 1421, 1954, 1972, 2034
BceAI	ACGGC	3 cut(s)	37, 384, 1342
BcgI	CGANNNNNNTGC	2 cut(s)	1004, 1038
BcnI	CCSGG	2 cut(s)	302, 712
BcoDI	GTCTC	2 cut(s)	808, 1666
BfaI	CTAG	6 cut(s)	104, 807, 1404, 1625, 1724, 1872
BfmI	CTRYAG	3 cut(s)	502, 559, 726
Bme1390I	CCNGG	2 cut(s)	302, 712
Bme18I	GGWCC	4 cut(s)	696, 1163, 1470, 1530
BmgT120I	GGNCC	8 cut(s)	696, 1109, 1163, 1470, 1530, 1537, 1549, 1578
BmiI	GGNNCC	7 cut(s)	345, 850, 975, 1110, 1668, 1705, 1816
BmrFI	CCNGG	2 cut(s)	302, 712
BmsI	GCATC	3 cut(s)	1121, 1414, 1946
BmtI	GCTAGC	1 cut(s)	1628
BpiI	GAAGAC	2 cut(s)	1681, 1896
Bpu10I	CCTNAGC	1 cut(s)	576
Bpu14I	TTCGAA	1 cut(s)	286
BpuEI	CTTGAG	2 cut(s)	1505, 1817
BpuMI	CCSGG	2 cut(s)	302, 712
BsaBI	GATNNNNATC	1 cut(s)	1381
BsaI	GGTCTC	1 cut(s)	1666
BsaJI	CCNNGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
BsaWI	WCCGGW	1 cut(s)	662
Bsc4I	CCNNNNNNNGG	6 cut(s)	142, 669, 1467, 1486, 1546, 1857
Bse1I	ACTGG	3 cut(s)	494, 1357, 1705
Bse21I	CCTNAGG	1 cut(s)	1086
Bse3DI	GCAATG	2 cut(s)	1373, 2032
Bse8I	GATNNNNATC	1 cut(s)	1381
BseDI	CCNNGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
BseJI	GATNNNNATC	1 cut(s)	1381
BseLI	CCNNNNNNNGG	6 cut(s)	142, 669, 1467, 1486, 1546, 1857
BseMI	GCAATG	2 cut(s)	1373, 2032
BseMII	CTCAG	5 cut(s)	561, 567, 692, 1077, 1233
BseNI	ACTGG	3 cut(s)	494, 1357, 1705
BseRI	GAGGAG	3 cut(s)	125, 170, 1622
BseSI	GKGCMC	2 cut(s)	853, 1795
BseXI	GCAGC	8 cut(s)	80, 457, 1027, 1237, 1421, 1954, 1972, 2034
BseYI	CCCAGC	1 cut(s)	1620
BsgI	GTGCAG	1 cut(s)	1025
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	6 cut(s)	24, 1111, 1479, 1539, 1551, 1579
BshNI	GGYRCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	1452
BsiSI	CCGG	3 cut(s)	302, 663, 712
BslFI	GGGAC	2 cut(s)	45, 2013
BslI	CCNNNNNNNGG	6 cut(s)	142, 669, 1467, 1486, 1546, 1857
BsmAI	GTCTC	2 cut(s)	808, 1666
BsmFI	GGGAC	2 cut(s)	45, 2013
BsmI	GAATGC	1 cut(s)	1524
BsnI	GGCC	6 cut(s)	24, 1111, 1479, 1539, 1551, 1579
Bso31I	GGTCTC	1 cut(s)	1666
Bsp119I	TTCGAA	1 cut(s)	286
Bsp1286I	GDGCHC	3 cut(s)	853, 1452, 1795
Bsp143I	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
Bsp19I	CCATGG	3 cut(s)	1533, 1670, 1855
BspACI	CCGC	7 cut(s)	70, 250, 746, 1013, 1026, 1271, 2186
BspANI	GGCC	6 cut(s)	24, 1111, 1479, 1539, 1551, 1579
BspCNI	CTCAG	5 cut(s)	562, 568, 691, 1078, 1234
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	7 cut(s)	345, 850, 975, 1110, 1668, 1705, 1816
BspMAI	CTGCAG	1 cut(s)	506
BspOI	GCTAGC	1 cut(s)	1628
BspPI	GGATC	9 cut(s)	326, 445, 968, 981, 1698, 1711, 1809, 1822, 1925
BspT104I	TTCGAA	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	848
BspTNI	GGTCTC	1 cut(s)	1666
BsrDI	GCAATG	2 cut(s)	1373, 2032
BsrI	ACTGG	3 cut(s)	494, 1357, 1705
BssECI	CCNNGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
BssMI	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
BssNAI	GTATAC	1 cut(s)	2087
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
Bst1107I	GTATAC	1 cut(s)	2087
Bst2BI	CACGAG	1 cut(s)	951
Bst4CI	ACNGT	7 cut(s)	560, 650, 730, 752, 917, 1173, 1603
Bst6I	CTCTTC	3 cut(s)	36, 57, 80
BstAPI	GCANNNNNTGC	1 cut(s)	479
BstBI	TTCGAA	1 cut(s)	286
BstC8I	GCNNGC	3 cut(s)	225, 1276, 1626
BstDEI	CTNAG	6 cut(s)	570, 576, 678, 1086, 1242, 2164
BstDSI	CCRYGG	3 cut(s)	1533, 1670, 1855
BstEII	GGTNACC	1 cut(s)	492
BstENI	CCTNNNNNAGG	1 cut(s)	1484
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	3 cut(s)	98, 895, 958
BstKTI	GATC	8 cut(s)	334, 440, 721, 976, 1210, 1706, 1817, 1920
BstMAI	GTCTC	2 cut(s)	808, 1666
BstMBI	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 479, 1012, 1409, 1568, 1991, 2028
BstNSI	RCATGY	2 cut(s)	925, 2006
BstPI	GGTNACC	1 cut(s)	492
BstSCI	CCNGG	2 cut(s)	300, 710
BstSFI	CTRYAG	3 cut(s)	502, 559, 726
BstSLI	GKGCMC	2 cut(s)	853, 1795
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	8 cut(s)	80, 457, 1027, 1237, 1421, 1954, 1972, 2034
BstV2I	GAAGAC	2 cut(s)	1681, 1896
BstX2I	RGATCY	4 cut(s)	973, 1703, 1814, 1917
BstXI	CCANNNNNNTGG	1 cut(s)	1761
BstYI	RGATCY	4 cut(s)	973, 1703, 1814, 1917
BstZ17I	GTATAC	1 cut(s)	2087
Bsu36I	CCTNAGG	1 cut(s)	1086
BsuRI	GGCC	6 cut(s)	24, 1111, 1479, 1539, 1551, 1579
BtgI	CCRYGG	3 cut(s)	1533, 1670, 1855
BtgZI	GCGATG	1 cut(s)	1480
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	6 cut(s)	324, 420, 487, 655, 1350, 1698
Cac8I	GCNNGC	3 cut(s)	225, 1276, 1626
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	3 cut(s)	98, 895, 958
Cfr13I	GGNCC	8 cut(s)	696, 1109, 1163, 1470, 1530, 1537, 1549, 1578
Csp6I	GTAC	4 cut(s)	595, 925, 1684, 1825
CspCI	CAANNNNNGTGG	4 cut(s)	1101, 1136, 1760, 1795
CviQI	GTAC	4 cut(s)	595, 925, 1684, 1825
DdeI	CTNAG	6 cut(s)	570, 576, 678, 1086, 1242, 2164
DpnI	GATC	8 cut(s)	333, 439, 720, 975, 1209, 1705, 1816, 1919
DpnII	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
DraI	TTTAAA	1 cut(s)	841
Eam1104I	CTCTTC	3 cut(s)	36, 57, 80
EarI	CTCTTC	3 cut(s)	36, 57, 80
EciI	GGCGGA	1 cut(s)	761
Eco130I	CCWWGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
Eco147I	AGGCCT	1 cut(s)	1479
Eco31I	GGTCTC	1 cut(s)	1666
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	4 cut(s)	696, 1163, 1470, 1530
Eco81I	CCTNAGG	1 cut(s)	1086
Eco91I	GGTNACC	1 cut(s)	492
EcoNI	CCTNNNNNAGG	1 cut(s)	1484
EcoO65I	GGTNACC	1 cut(s)	492
EcoRI	GAATTC	1 cut(s)	2130
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
EcoT22I	ATGCAT	1 cut(s)	1573
ErhI	CCWWGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
FaqI	GGGAC	2 cut(s)	45, 2013
FauNDI	CATATG	2 cut(s)	320, 1558
FblI	GTMKAC	4 cut(s)	5, 645, 1238, 2086
FspBI	CTAG	6 cut(s)	104, 807, 1404, 1625, 1724, 1872
GlaI	GCGC	3 cut(s)	97, 894, 957
GsaI	CCCAGC	1 cut(s)	1624
HaeIII	GGCC	6 cut(s)	24, 1111, 1479, 1539, 1551, 1579
HapII	CCGG	3 cut(s)	302, 663, 712
HhaI	GCGC	3 cut(s)	98, 895, 958
Hin6I	GCGC	3 cut(s)	96, 893, 956
HinP1I	GCGC	3 cut(s)	96, 893, 956
HincII	GTYRAC	3 cut(s)	6, 364, 1978
HindII	GTYRAC	3 cut(s)	6, 364, 1978
HindIII	AAGCTT	2 cut(s)	225, 537
HinfI	GANTC	5 cut(s)	191, 824, 1029, 1641, 1932
HpaII	CCGG	3 cut(s)	302, 663, 712
HphI	GGTGA	6 cut(s)	110, 160, 208, 391, 1173, 1932
Hpy166II	GTNNAC	9 cut(s)	6, 364, 619, 646, 1058, 1219, 1239, 1978, 2087
Hpy188III	TCNNGA	6 cut(s)	533, 631, 807, 883, 1085, 1193
Hpy8I	GTNNAC	9 cut(s)	6, 364, 619, 646, 1058, 1219, 1239, 1978, 2087
Hpy99I	CGWCG	3 cut(s)	23, 362, 403
HpyAV	CCTTC	9 cut(s)	35, 169, 400, 957, 1367, 1621, 1733, 1813, 1838
HpyCH4III	ACNGT	7 cut(s)	560, 650, 730, 752, 917, 1173, 1603
HpyCH4IV	ACGT	4 cut(s)	357, 858, 1517, 1686
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 479, 1012, 1409, 1568, 1991, 2028
HpyF3I	CTNAG	6 cut(s)	570, 576, 678, 1086, 1242, 2164
HpySE526I	ACGT	4 cut(s)	357, 858, 1517, 1686
HspAI	GCGC	3 cut(s)	96, 893, 956
Kzo9I	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
LmnI	GCTCC	2 cut(s)	343, 1666
Lsp1109I	GCAGC	8 cut(s)	80, 457, 1027, 1237, 1421, 1954, 1972, 2034
LweI	GCATC	3 cut(s)	1121, 1414, 1946
MaeI	CTAG	6 cut(s)	104, 807, 1404, 1625, 1724, 1872
MaeII	ACGT	4 cut(s)	357, 858, 1517, 1686
MaeIII	GTNAC	7 cut(s)	492, 658, 917, 1167, 1867, 2117, 2194
MalI	GATC	8 cut(s)	333, 439, 720, 975, 1209, 1705, 1816, 1919
MboI	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
MboII	GAAGA	9 cut(s)	23, 44, 67, 154, 275, 1147, 1321, 1681, 1901
MflI	RGATCY	4 cut(s)	973, 1703, 1814, 1917
MhlI	GDGCHC	3 cut(s)	853, 1452, 1795
MlyI	GAGTC	2 cut(s)	185, 1941
MmeI	TCCRAC	2 cut(s)	213, 422
Mph1103I	ATGCAT	1 cut(s)	1573
MseI	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2203
MslI	CAYNNNNRTG	2 cut(s)	608, 1949
MspA1I	CMGCKG	1 cut(s)	878
MspI	CCGG	3 cut(s)	302, 663, 712
MspR9I	CCNGG	2 cut(s)	302, 712
Mva1269I	GAATGC	1 cut(s)	1524
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	7 cut(s)	104, 479, 1012, 1409, 1568, 1991, 2028
NciI	CCSGG	2 cut(s)	302, 712
NcoI	CCATGG	3 cut(s)	1533, 1670, 1855
NdeI	CATATG	2 cut(s)	320, 1558
NdeII	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
NheI	GCTAGC	1 cut(s)	1624
NlaIV	GGNNCC	7 cut(s)	345, 850, 975, 1110, 1668, 1705, 1816
NmeAIII	GCCGAG	1 cut(s)	122
NmuCI	GTSAC	4 cut(s)	917, 1167, 1867, 2117
NsiI	ATGCAT	1 cut(s)	1573
NspI	RCATGY	2 cut(s)	925, 2006
NspV	TTCGAA	1 cut(s)	286
PagI	TCATGA	1 cut(s)	882
PceI	AGGCCT	1 cut(s)	1479
PciI	ACATGT	2 cut(s)	921, 2002
PctI	GAATGC	1 cut(s)	1524
PfeI	GAWTC	3 cut(s)	824, 1029, 1641
PflMI	CCANNNNNTGG	1 cut(s)	1467
PleI	GAGTC	2 cut(s)	185, 1940
PpsI	GAGTC	2 cut(s)	185, 1940
PscI	ACATGT	2 cut(s)	921, 2002
PshBI	ATTAAT	1 cut(s)	1080
PspEI	GGTNACC	1 cut(s)	492
PspFI	CCCAGC	1 cut(s)	1620
PspN4I	GGNNCC	7 cut(s)	345, 850, 975, 1110, 1668, 1705, 1816
PspPI	GGNCC	8 cut(s)	696, 1109, 1163, 1470, 1530, 1537, 1549, 1578
PstI	CTGCAG	1 cut(s)	506
PsuI	RGATCY	4 cut(s)	973, 1703, 1814, 1917
PvuII	CAGCTG	1 cut(s)	878
RsaI	GTAC	4 cut(s)	596, 926, 1685, 1826
RsaNI	GTAC	4 cut(s)	595, 925, 1684, 1825
RseI	CAYNNNNRTG	2 cut(s)	608, 1949
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2203
Sau3AI	GATC	8 cut(s)	331, 437, 718, 973, 1207, 1703, 1814, 1917
Sau96I	GGNCC	8 cut(s)	696, 1109, 1163, 1470, 1530, 1537, 1549, 1578
SchI	GAGTC	2 cut(s)	185, 1941
ScrFI	CCNGG	2 cut(s)	302, 712
SduI	GDGCHC	3 cut(s)	853, 1452, 1795
SfaNI	GCATC	3 cut(s)	1121, 1414, 1946
SfcI	CTRYAG	3 cut(s)	502, 559, 726
SfuI	TTCGAA	1 cut(s)	286
SinI	GGWCC	4 cut(s)	696, 1163, 1470, 1530
SmiMI	CAYNNNNRTG	2 cut(s)	608, 1949
SmlI	CTYRAG	2 cut(s)	1484, 1832
SmoI	CTYRAG	2 cut(s)	1484, 1832
SseBI	AGGCCT	1 cut(s)	1479
SsiI	CCGC	7 cut(s)	70, 250, 746, 1013, 1026, 1271, 2186
SspMI	CTAG	6 cut(s)	104, 807, 1404, 1625, 1724, 1872
StuI	AGGCCT	1 cut(s)	1479
StyD4I	CCNGG	2 cut(s)	300, 710
StyI	CCWWGG	7 cut(s)	598, 1533, 1656, 1670, 1839, 1855, 1912
TaaI	ACNGT	7 cut(s)	560, 650, 730, 752, 917, 1173, 1603
TaiI	ACGT	4 cut(s)	360, 861, 1520, 1689
TaqI	TCGA	4 cut(s)	5, 286, 630, 868
TaqII	GACCGA	2 cut(s)	713, 1518
TatI	WGTACW	1 cut(s)	924
TauI	GCSGC	2 cut(s)	1274, 2189
TfiI	GAWTC	3 cut(s)	824, 1029, 1641
Tru1I	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2203
Tru9I	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2203
TscAI	CASTG	6 cut(s)	331, 420, 494, 655, 1357, 1705
TseFI	GTSAC	4 cut(s)	917, 1167, 1867, 2117
TseI	GCWGC	8 cut(s)	93, 470, 1015, 1225, 1409, 1967, 1985, 2022
Tsp45I	GTSAC	4 cut(s)	917, 1167, 1867, 2117
TspGWI	ACGGA	3 cut(s)	416, 447, 1155
TspRI	CASTG	6 cut(s)	331, 420, 494, 655, 1357, 1705
Van91I	CCANNNNNTGG	1 cut(s)	1467
VpaK11BI	GGWCC	4 cut(s)	696, 1163, 1470, 1530
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	1 cut(s)	1484
XapI	RAATTY	2 cut(s)	1188, 2130
XbaI	TCTAGA	1 cut(s)	806
XceI	RCATGY	2 cut(s)	925, 2006
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1978
XmiI	GTMKAC	4 cut(s)	5, 645, 1238, 2086
XspI	CTAG	6 cut(s)	104, 807, 1404, 1625, 1724, 1872
Zsp2I	ATGCAT	1 cut(s)	1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.