Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0004643

Physical Location & Seq

Genomic Coordinates Reverse (-)

6220816 .. 6224623

Gene Structure 3808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG085500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGTCGACCACCACCACCGACGGCCTTCCTCTTCACACCCACAAACACTCTCTTCGCACTCCCATCAACCGCCTCTTCGTTCTAATTTACTGCTGCGCCATCCTAGCCTTGCTCTATCACCACACACTCTCCCTCCTCCACTCCGCAACTCTAACCTCCTTCTTCATCACCCTCACCCTCCTCATCTCCGACTCCATCCTCGCTTTCTTGAACATCACCACGCAAGCTTTCCGAATGAAGCCCATCTACCGCAAAGAATACCCCGAAAACCTCAAAAGAGTTCTTCGAAAAGCCGACTTCCCGGCACTTGATGTGTTCATATGCACTGCGGATCCCTACAAGGAGCCTCCGATGAACGTCGTCAACACGGCGTTGTCGGTGATGGGTTATGATTATCCGACGGAGAAGGTGTCAGTGTATGTTTCCGACGACGGAGGATCGGCTCTAACTCTGTTTGCGTTCATGGAGGCTGCAAAGTTTGCAAGGCACTGGTTACCTTTCTGCAGGGAGAACAACATTGTGGAAAGGTGTCCAGAAGCTTTTTTCCAAATGGATTCCTCTAGGTTTTCTGAGGCTGAGGAAATTAAGATTATGTACCAAGGCATGAAAGTGAGGGTGGACAATGTAATCGAGAGAGGCAAAGTAGACAGTGAATACGTAACCGGAGAATGGGAAACTCAGGCTTTTAGCAAATGGACCGATGGATTTACCCGGCGAGATCATCCTACAGTCATTCAGGTTTTGGCGGACAGTAGCAAAGACAGAGATATCACAGATAATGTTATGCCAAACTTAATCTACGTCTCTAGAGAAAAAAGGAGAAAATCAGAACATAACTTTAAAGCTGGTGCCCTTAATGTCCTTATTCGAGTTTCAGCTGTCATGACCAATGCGCCAATAGTCTTAACCCAAGACTGTGACATGTACTCCAATGACCCACAAACGCCTTCTCGTGTGCTATGCTACTTATCGGATCCTAAACTTCGATCCAAATTAGGATATGTGCAGTTTCCACAGCGATTTCGCGGAATCAACAAGAATGACATATATGGATGTGAACACAAGTGTTTGTTTGTGATTAATCCTGAGGGAATGGATGGGGTTTCGGGGCCAAGTTATGTGGGAACAGGATGCTTTTTCAATAGGCGAGTTTTCTTTGGAGGTCCGTCACAGTTGTTATCACCTGAAATTCCTGAATTAGCACCAGATAATGTGGTGGACAAGCCCATTCAGTCTACTGAGGTCTTGGAGTTGGCACATTCTGTTGCGGCTTGCAATTATGAGAATAACACCGATTGGGGATGGAAGATTGGTGTAAGATACGGCTCTCTGGTGGAGGACTACTTCACTGGTTATCGTTTGCAATGTGAAGGATGGAAATCTGTATTCTGCAATCCTGCTAGGGCAGCATTTTATGGAGATGCCCCGATCAACCTTGTTGATGTGCTCAATCAAACCAAGCGATGGACCATAGGCCTCCTTGAGGTTGCTTTCTCTAAATATAGTCCAATTACGTTTGGCATTCGGTCCATGGGCCTTTTGATGGGCCTTTCATATGCTCACTATGCATTTTGGCCCATTTGGTCAATTCCAATCACGGTTTATGCCTTCCTCCCCCAGCTAGCTCTCCTCAATGGAATCAACATCTTTCCCAAGGTAACATACATACATCCATCTTTGATCCGTTTCTTTCTCAGGGTAATGTTCTTCATATATTTTAACGTCGTATTGTGTATTGTGATGTTATCAACTTGGATTGTATATCTAAATGAAAATTTAAATAATTTATGGTTCAAATCGACAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

602

Amino Acids

68.77

Weight (kDa)

7.85

Isoelectric Point (pI)

37.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	103 - 387	2e-85	Cellulose synthase
Cellulose_synt	PF03552	405 - 577	9.9e-41	Cellulose synthase
Glyco_trans_2_3	PF13632	441 - 536	3.9e-08	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23990 AT4G23990 AT4G24000 AT4G24000 AT4G24010
fragaria_vesca	FvH4_5g11680
malus_domestica	MD14G1132000.v1.1 MD14G1132200.v1.1 MD14G1132300.v1.1
prunus_persica	Prupe.5G123500_v2.0.a1 Prupe.5G123600_v2.0.a1 Prupe.5G123700_v2.0.a1 Prupe.5G123800_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1
pyrus_communis	pycom06g10420
rosa_chinensis	RchiOBHm_Chr7g0186101
rosa_laevigata	RLG00000004864
rosa_multiflora	Rmu_co8339917.1_g000001 Rmu_sc0000194.1_g000028
rosa_roxburghii	Rroxscaffold_3G00268430
rosa_rugosa	Rorug06G0472200
rosa_samantha	Rh7AG069600 Rh7BG085500 Rh7CG078600 Rh7DG078600
rosa_wichuraiana	Rw7G006540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	1 cut(s)	1464
AccI	GTMKAC	3 cut(s)	5, 645, 1235
AccII	CGCG	1 cut(s)	1026
AciI	CCGC	7 cut(s)	70, 144, 250, 329, 746, 1026, 1268
AclWI	GGATC	7 cut(s)	326, 339, 445, 968, 981, 981, 1675
AcsI	RAATTY	2 cut(s)	1188, 1774
AfaI	GTAC	2 cut(s)	596, 926
AfiI	CCNNNNNNNGG	4 cut(s)	669, 1464, 1483, 1543
AflIII	ACRYGT	1 cut(s)	921
AgsI	TTSAA	3 cut(s)	211, 1141, 1795
AluBI	AGCT	6 cut(s)	227, 539, 845, 878, 1621, 1625
AluI	AGCT	6 cut(s)	227, 539, 845, 878, 1621, 1625
Alw21I	GWGCWC	1 cut(s)	1449
Alw26I	GTCTC	1 cut(s)	808
AlwI	GGATC	7 cut(s)	326, 339, 445, 968, 981, 981, 1675
AoxI	GGCC	6 cut(s)	22, 1109, 1474, 1534, 1546, 1574
ApeKI	GCWGC	3 cut(s)	93, 470, 1406
ApoI	RAATTY	2 cut(s)	1188, 1774
AseI	ATTAAT	1 cut(s)	1080
AspLEI	GCGC	2 cut(s)	98, 895
AspS9I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
AsuC2I	CCSGG	2 cut(s)	302, 712
AsuHPI	GGTGA	6 cut(s)	110, 160, 166, 208, 391, 1173
AsuII	TTCGAA	1 cut(s)	286
AsuNHI	GCTAGC	1 cut(s)	1621
AvaII	GGWCC	4 cut(s)	696, 1163, 1467, 1527
AxyI	CCTNAGG	1 cut(s)	1086
BaeGI	GKGCMC	1 cut(s)	853
BamHI	GGATCC	2 cut(s)	331, 973
BanI	GGYRCC	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	230, 262
BauI	CACGAG	1 cut(s)	951
Bbv12I	GWGCWC	1 cut(s)	1449
BbvCI	CCTCAGC	1 cut(s)	576
BbvI	GCAGC	3 cut(s)	80, 457, 1418
BceAI	ACGGC	3 cut(s)	37, 384, 1339
BcnI	CCSGG	2 cut(s)	302, 712
BcoDI	GTCTC	1 cut(s)	808
BfaI	CTAG	5 cut(s)	104, 561, 807, 1401, 1622
BfmI	CTRYAG	2 cut(s)	502, 726
BisI	GCNGC	4 cut(s)	94, 471, 1269, 1407
BlsI	GCNGC	4 cut(s)	95, 472, 1270, 1408
Bme1390I	CCNGG	2 cut(s)	302, 712
Bme18I	GGWCC	4 cut(s)	696, 1163, 1467, 1527
BmgT120I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
BmiI	GGNNCC	5 cut(s)	333, 345, 850, 975, 1110
BmrFI	CCNGG	2 cut(s)	302, 712
BmsI	GCATC	2 cut(s)	1121, 1411
BmtI	GCTAGC	1 cut(s)	1625
Bpu10I	CCTNAGC	1 cut(s)	576
Bpu14I	TTCGAA	1 cut(s)	286
BpuEI	CTTGAG	1 cut(s)	1502
BpuMI	CCSGG	2 cut(s)	302, 712
BsaAI	YACGTR	1 cut(s)	658
BsaBI	GATNNNNATC	1 cut(s)	1378
BsaJI	CCNNGG	3 cut(s)	598, 1530, 1653
BsaWI	WCCGGW	1 cut(s)	662
BsaXI	ACNNNNNCTCC	8 cut(s)	113, 117, 143, 147, 395, 425, 911, 941
Bsc4I	CCNNNNNNNGG	4 cut(s)	669, 1464, 1483, 1543
Bse1I	ACTGG	2 cut(s)	494, 1354
Bse21I	CCTNAGG	1 cut(s)	1086
Bse3DI	GCAATG	1 cut(s)	1370
Bse8I	GATNNNNATC	1 cut(s)	1378
BseDI	CCNNGG	3 cut(s)	598, 1530, 1653
BseGI	GGATG	9 cut(s)	99, 195, 721, 1058, 1102, 1136, 1307, 1379, 1669
BseJI	GATNNNNATC	1 cut(s)	1378
BseLI	CCNNNNNNNGG	4 cut(s)	669, 1464, 1483, 1543
BseMI	GCAATG	1 cut(s)	1370
BseMII	CTCAG	6 cut(s)	561, 567, 692, 1077, 1230, 1708
BseNI	ACTGG	2 cut(s)	494, 1354
BseRI	GAGGAG	3 cut(s)	125, 170, 1619
BseSI	GKGCMC	1 cut(s)	853
BseXI	GCAGC	3 cut(s)	80, 457, 1418
BseYI	CCCAGC	1 cut(s)	1617
BsgI	GTGCAG	1 cut(s)	1025
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
BshNI	GGYRCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	1449
BsiSI	CCGG	3 cut(s)	302, 663, 712
BslI	CCNNNNNNNGG	4 cut(s)	669, 1464, 1483, 1543
BsmAI	GTCTC	1 cut(s)	808
BsmBI	CGTCTC	1 cut(s)	808
BsmI	GAATGC	1 cut(s)	1521
BsnI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
Bsp119I	TTCGAA	1 cut(s)	286
Bsp1286I	GDGCHC	2 cut(s)	853, 1449
Bsp143I	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
Bsp19I	CCATGG	1 cut(s)	1530
BspACI	CCGC	7 cut(s)	70, 144, 250, 329, 746, 1026, 1268
BspANI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
BspCNI	CTCAG	6 cut(s)	562, 568, 691, 1078, 1231, 1707
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	5 cut(s)	333, 345, 850, 975, 1110
BspMAI	CTGCAG	1 cut(s)	506
BspOI	GCTAGC	1 cut(s)	1625
BspPI	GGATC	7 cut(s)	326, 339, 445, 968, 981, 981, 1675
BspT104I	TTCGAA	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	848
BsrDI	GCAATG	1 cut(s)	1370
BsrI	ACTGG	2 cut(s)	494, 1354
BssECI	CCNNGG	3 cut(s)	598, 1530, 1653
BssMI	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	3 cut(s)	598, 1530, 1653
Bst2BI	CACGAG	1 cut(s)	951
Bst4CI	ACNGT	6 cut(s)	650, 730, 752, 917, 1173, 1600
Bst6I	CTCTTC	3 cut(s)	36, 57, 80
BstAPI	GCANNNNNTGC	1 cut(s)	479
BstBAI	YACGTR	1 cut(s)	658
BstBI	TTCGAA	1 cut(s)	286
BstC8I	GCNNGC	3 cut(s)	225, 1273, 1623
BstDEI	CTNAG	6 cut(s)	570, 576, 678, 1086, 1239, 1694
BstDSI	CCRYGG	1 cut(s)	1530
BstEII	GGTNACC	1 cut(s)	492
BstENI	CCTNNNNNAGG	1 cut(s)	1481
BstF5I	GGATG	9 cut(s)	99, 195, 721, 1058, 1102, 1136, 1307, 1379, 1669
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	2 cut(s)	98, 895
BstKTI	GATC	7 cut(s)	334, 440, 721, 976, 989, 1431, 1683
BstMAI	GTCTC	1 cut(s)	808
BstMBI	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
BstMWI	GCNNNNNNNGC	4 cut(s)	104, 479, 1406, 1565
BstNSI	RCATGY	1 cut(s)	925
BstPI	GGTNACC	1 cut(s)	492
BstSCI	CCNGG	2 cut(s)	300, 710
BstSFI	CTRYAG	2 cut(s)	502, 726
BstSLI	GKGCMC	1 cut(s)	853
BstSNI	TACGTA	1 cut(s)	658
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	3 cut(s)	80, 457, 1418
BstX2I	RGATCY	2 cut(s)	331, 973
BstYI	RGATCY	2 cut(s)	331, 973
Bsu36I	CCTNAGG	1 cut(s)	1086
BsuRI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
BtgI	CCRYGG	1 cut(s)	1530
BtgZI	GCGATG	1 cut(s)	1477
BtsCI	GGATG	9 cut(s)	99, 195, 721, 1058, 1102, 1136, 1307, 1379, 1669
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	5 cut(s)	324, 420, 487, 655, 1347
Cac8I	GCNNGC	3 cut(s)	225, 1273, 1623
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	2 cut(s)	98, 895
Cfr13I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
Csp6I	GTAC	2 cut(s)	595, 925
CspCI	CAANNNNNGTGG	2 cut(s)	1101, 1136
CviAII	CATG	5 cut(s)	463, 604, 883, 922, 1531
CviQI	GTAC	2 cut(s)	595, 925
DdeI	CTNAG	6 cut(s)	570, 576, 678, 1086, 1239, 1694
DpnI	GATC	7 cut(s)	333, 439, 720, 975, 988, 1430, 1682
DpnII	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
DraI	TTTAAA	2 cut(s)	841, 1779
Eam1104I	CTCTTC	3 cut(s)	36, 57, 80
EarI	CTCTTC	3 cut(s)	36, 57, 80
EciI	GGCGGA	1 cut(s)	761
Eco105I	TACGTA	1 cut(s)	658
Eco130I	CCWWGG	3 cut(s)	598, 1530, 1653
Eco147I	AGGCCT	1 cut(s)	1476
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	4 cut(s)	696, 1163, 1467, 1527
Eco81I	CCTNAGG	1 cut(s)	1086
Eco91I	GGTNACC	1 cut(s)	492
EcoNI	CCTNNNNNAGG	1 cut(s)	1481
EcoO65I	GGTNACC	1 cut(s)	492
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	3 cut(s)	598, 1530, 1653
EcoT22I	ATGCAT	1 cut(s)	1570
ErhI	CCWWGG	3 cut(s)	598, 1530, 1653
Esp3I	CGTCTC	1 cut(s)	808
FaeI	CATG	5 cut(s)	466, 607, 886, 925, 1534
FatI	CATG	5 cut(s)	462, 603, 882, 921, 1530
FauNDI	CATATG	2 cut(s)	320, 1555
FblI	GTMKAC	3 cut(s)	5, 645, 1235
Fnu4HI	GCNGC	4 cut(s)	94, 471, 1269, 1407
FokI	GGATG	9 cut(s)	86, 182, 708, 1065, 1109, 1143, 1314, 1386, 1656
Fsp4HI	GCNGC	4 cut(s)	94, 471, 1269, 1407
FspBI	CTAG	5 cut(s)	104, 561, 807, 1401, 1622
GlaI	GCGC	2 cut(s)	97, 894
GluI	GCNGC	4 cut(s)	94, 471, 1269, 1407
GsaI	CCCAGC	1 cut(s)	1621
HaeIII	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
HapII	CCGG	3 cut(s)	302, 663, 712
HhaI	GCGC	2 cut(s)	98, 895
Hin1II	CATG	5 cut(s)	466, 607, 886, 925, 1534
Hin6I	GCGC	2 cut(s)	96, 893
HinP1I	GCGC	2 cut(s)	96, 893
HincII	GTYRAC	2 cut(s)	6, 364
HindII	GTYRAC	2 cut(s)	6, 364
HindIII	AAGCTT	2 cut(s)	225, 537
HinfI	GANTC	4 cut(s)	191, 554, 1029, 1638
HpaII	CCGG	3 cut(s)	302, 663, 712
HphI	GGTGA	6 cut(s)	110, 160, 166, 208, 391, 1173
Hpy166II	GTNNAC	7 cut(s)	6, 364, 619, 646, 1058, 1219, 1236
Hpy188I	TCNGA	9 cut(s)	190, 233, 351, 399, 427, 571, 829, 973, 1808
Hpy188III	TCNNGA	7 cut(s)	208, 533, 631, 807, 883, 1085, 1193
Hpy8I	GTNNAC	7 cut(s)	6, 364, 619, 646, 1058, 1219, 1236
Hpy99I	CGWCG	6 cut(s)	23, 362, 403, 431, 434, 1727
HpyAV	CCTTC	6 cut(s)	35, 169, 400, 957, 1364, 1618
HpyCH4III	ACNGT	6 cut(s)	650, 730, 752, 917, 1173, 1600
HpyCH4IV	ACGT	5 cut(s)	357, 657, 801, 1514, 1722
HpyCH4V	TGCA	9 cut(s)	324, 473, 482, 504, 1006, 1275, 1363, 1392, 1568
HpyF10VI	GCNNNNNNNGC	4 cut(s)	104, 479, 1406, 1565
HpyF3I	CTNAG	6 cut(s)	570, 576, 678, 1086, 1239, 1694
HpySE526I	ACGT	5 cut(s)	357, 657, 801, 1514, 1722
Hsp92II	CATG	5 cut(s)	466, 607, 886, 925, 1534
HspAI	GCGC	2 cut(s)	96, 893
Kzo9I	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
LmnI	GCTCC	1 cut(s)	343
Lsp1109I	GCAGC	3 cut(s)	80, 457, 1418
LweI	GCATC	2 cut(s)	1121, 1411
MaeI	CTAG	5 cut(s)	104, 561, 807, 1401, 1622
MaeII	ACGT	5 cut(s)	357, 657, 801, 1514, 1722
MaeIII	GTNAC	5 cut(s)	492, 658, 917, 1167, 1657
MalI	GATC	7 cut(s)	333, 439, 720, 975, 988, 1430, 1682
MboI	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
MboII	GAAGA	7 cut(s)	23, 44, 67, 154, 275, 1318, 1699
MflI	RGATCY	2 cut(s)	331, 973
MhlI	GDGCHC	2 cut(s)	853, 1449
MlyI	GAGTC	1 cut(s)	185
MmeI	TCCRAC	3 cut(s)	213, 422, 450
Mph1103I	ATGCAT	1 cut(s)	1570
MseI	TTAA	8 cut(s)	585, 794, 840, 855, 905, 1080, 1719, 1778
MslI	CAYNNNNRTG	1 cut(s)	608
MspA1I	CMGCKG	1 cut(s)	878
MspI	CCGG	3 cut(s)	302, 663, 712
MspR9I	CCNGG	2 cut(s)	302, 712
Mva1269I	GAATGC	1 cut(s)	1521
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	4 cut(s)	104, 479, 1406, 1565
NciI	CCSGG	2 cut(s)	302, 712
NcoI	CCATGG	1 cut(s)	1530
NdeI	CATATG	2 cut(s)	320, 1555
NdeII	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
NheI	GCTAGC	1 cut(s)	1621
NlaIII	CATG	5 cut(s)	466, 607, 886, 925, 1534
NlaIV	GGNNCC	5 cut(s)	333, 345, 850, 975, 1110
NmuCI	GTSAC	2 cut(s)	917, 1167
NsiI	ATGCAT	1 cut(s)	1570
NspI	RCATGY	1 cut(s)	925
NspV	TTCGAA	1 cut(s)	286
PagI	TCATGA	1 cut(s)	882
PceI	AGGCCT	1 cut(s)	1476
PciI	ACATGT	1 cut(s)	921
PctI	GAATGC	1 cut(s)	1521
PfeI	GAWTC	3 cut(s)	554, 1029, 1638
PflMI	CCANNNNNTGG	1 cut(s)	1464
PkrI	GCNGC	4 cut(s)	95, 472, 1270, 1408
PleI	GAGTC	1 cut(s)	185
PpsI	GAGTC	1 cut(s)	185
Ppu21I	YACGTR	1 cut(s)	658
PscI	ACATGT	1 cut(s)	921
PshBI	ATTAAT	1 cut(s)	1080
PspEI	GGTNACC	1 cut(s)	492
PspFI	CCCAGC	1 cut(s)	1617
PspN4I	GGNNCC	5 cut(s)	333, 345, 850, 975, 1110
PspPI	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
PstI	CTGCAG	1 cut(s)	506
PsuI	RGATCY	2 cut(s)	331, 973
PvuII	CAGCTG	1 cut(s)	878
RsaI	GTAC	2 cut(s)	596, 926
RsaNI	GTAC	2 cut(s)	595, 925
RseI	CAYNNNNRTG	1 cut(s)	608
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	8 cut(s)	585, 794, 840, 855, 905, 1080, 1719, 1778
SatI	GCNGC	4 cut(s)	94, 471, 1269, 1407
Sau3AI	GATC	7 cut(s)	331, 437, 718, 973, 986, 1428, 1680
Sau96I	GGNCC	8 cut(s)	696, 1109, 1163, 1467, 1527, 1534, 1546, 1575
SchI	GAGTC	1 cut(s)	185
ScrFI	CCNGG	2 cut(s)	302, 712
SduI	GDGCHC	2 cut(s)	853, 1449
SfaNI	GCATC	2 cut(s)	1121, 1411
SfcI	CTRYAG	2 cut(s)	502, 726
SfuI	TTCGAA	1 cut(s)	286
SinI	GGWCC	4 cut(s)	696, 1163, 1467, 1527
SmiI	ATTTAAAT	1 cut(s)	1779
SmiMI	CAYNNNNRTG	1 cut(s)	608
SmlI	CTYRAG	1 cut(s)	1481
SmoI	CTYRAG	1 cut(s)	1481
SnaBI	TACGTA	1 cut(s)	658
SseBI	AGGCCT	1 cut(s)	1476
SsiI	CCGC	7 cut(s)	70, 144, 250, 329, 746, 1026, 1268
SspMI	CTAG	5 cut(s)	104, 561, 807, 1401, 1622
StuI	AGGCCT	1 cut(s)	1476
StyD4I	CCNGG	2 cut(s)	300, 710
StyI	CCWWGG	3 cut(s)	598, 1530, 1653
SwaI	ATTTAAAT	1 cut(s)	1779
TaaI	ACNGT	6 cut(s)	650, 730, 752, 917, 1173, 1600
TaiI	ACGT	5 cut(s)	360, 660, 804, 1517, 1725
TaqI	TCGA	6 cut(s)	5, 286, 630, 868, 985, 1799
TaqII	GACCGA	2 cut(s)	713, 1515
TatI	WGTACW	1 cut(s)	924
TauI	GCSGC	1 cut(s)	1271
TfiI	GAWTC	3 cut(s)	554, 1029, 1638
Tru1I	TTAA	8 cut(s)	585, 794, 840, 855, 905, 1080, 1719, 1778
Tru9I	TTAA	8 cut(s)	585, 794, 840, 855, 905, 1080, 1719, 1778
TscAI	CASTG	5 cut(s)	331, 420, 494, 655, 1354
TseFI	GTSAC	2 cut(s)	917, 1167
TseI	GCWGC	3 cut(s)	93, 470, 1406
Tsp45I	GTSAC	2 cut(s)	917, 1167
TspDTI	ATGAA	9 cut(s)	154, 251, 307, 368, 451, 620, 1542, 1699, 1785
TspGWI	ACGGA	4 cut(s)	416, 447, 1155, 1673
TspRI	CASTG	5 cut(s)	331, 420, 494, 655, 1354
Van91I	CCANNNNNTGG	1 cut(s)	1464
VpaK11BI	GGWCC	4 cut(s)	696, 1163, 1467, 1527
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	1 cut(s)	1481
XapI	RAATTY	2 cut(s)	1188, 1774
XbaI	TCTAGA	1 cut(s)	806
XceI	RCATGY	1 cut(s)	925
XmiI	GTMKAC	3 cut(s)	5, 645, 1235
XspI	CTAG	5 cut(s)	104, 561, 807, 1401, 1622
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.