Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004643

Physical Location & Seq

Genomic Coordinates Forward (+)

5597057 .. 5601443

Gene Structure 4387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G006540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGTCGACCACCACCACCGACGGCCTTCCTCTTCACACCCACAAACACTCTCTTCGCACTCCCATCAACCGCCTCTTCGTTCTAATTTACTGCTGCGCCATCCTAGCCTTGCTCTATCACCACACACTCTCCCTCCTCCACTCCGCAACCATGACCTCCTTCTTCATCACCCTCACCCTCCTCATCTCCGACTCCATCCTCGCTTTCTTGAACATCACCACGCAAGCTTTCCGAATGAAGCCCATCTACCGCAAAGAATACCCCGAAAACCTCAAAAGAATTCTTCGAAAAGCCGACTTCCCGGCACTTGATGTGTTCATATGCACTGCTGATCCCTACAAGGAGCCTCCGATGAACGTCGTCAACACGGCGTTGTCGGTGATGGGTTATGATTATCCGACGGAGAAGGTGTCAGTGTATGTTTCCGACGACGGAGGATCGGCTCTAACTCTGTTTGCGTTCATGGAGGCTGCAAAGTTTGCAAGGCACTGGTTACCTTTCTGCAGGGAGAACAACATAGTGGAAAGGTGTCCCGAAGCTTTTTTCCAAATGGATTACTCTAGGTCTTCTGAGGCTGAGGAAATTAAGATTATGTACCAAGGCATGAAAGTGAGAGTGGACAATGTAATCGAGAGAGGCAAAGTAGACAGTGAATACGTAACCGGAGAATGGGAAACTCAGGCTTTTAGCAAATGGATCGATGGATTTACCCAGCGAGATCATCCTACAGTCATTCAGGTTTTGGCGGACAGTAGCAAAGACAGAGATATCACAGATAATGTTATGCCAAACTTAATCTATGTCTCCAGAGAAAAAAGCAGGAAATCAGAACATAACTTTAAAGCTGGTGCCCTTAATGTCCTTATTCGAGTTTCAGCTGTCATGACCAATGCGCCAATAGTCTTAACCCAAGACTGTGACATGTACTCCAATGACCCACAAACGCCTTCTCGTGCGCTATGCTATTTATCGGATCCTAAACTTGGATCCAAATTAGGATACGTGCAGTTTCCTCAGCGATTTCGCGGAATCAACAAGAATGACATATATGGATGTGAACACAAGTGTCTGTTTGTGATTAATCCTGAGGGAATGGATGGGTTTTCGGGGCCAAGTTATGTGGGAACAGGATGCTTTTTCAATAGGCGAGTTTTCTTCGGAGGTCCGTCGCAGTTGTTATCACCTGAAATTCCTGAATTAGCACCAGATAATGTGGTGGACAAGCCCATTCGGTCTACTGAGGTCTTGGAGTTGGCACATTCTGTTGCGGCTTGCAATTATGAGAATAATACCGACTGGGGATGGAAGATTGGTGTAAGATACGGCTCTCTGGTGGAGGACTACTTCACTGGTTATCGTTTGCAATGTGAAGGATGGAAATCTGTATTCTGCAATCCTGCTAGGGCAACATTTTATGGAGATGCCCCAATCAACCTTGTTGATGTGCTCAATCAAACCAAGCGATGGACCATAGGCCTCCTTGAGGTTGCTTTCTCTAAGTATAGTCCAATTACGTTTGGCATTCGGTCCATGGGCCTTTTGATGGGCCTTTCATATGCTCACTATGCATTTTGGCCCATTTGGTCAATTCCAATCACGGTTTATGCCTTCCTCCCCCAGCTAGCTCTCCTCAATGGAATCAACATCTTTCCCAAGGTCTCGGAGCCATGGTTTCTCTTGTACGTCTTCCTTTTCATTGGATCCTATATCCAAAACTACCTAGACTTTGTGGTAGAAGGAGGAACATTCCCAAAGTGGTGGAATGACCAAAGAATGTGGATGATTAGGGCACTCTCATCCTTCTTGTTTGGATCCATAGAGTACCTTCTCATGTCCTTGGGCATTTCCACCCATGGGTTCAATGTGACTAGCAAAGTCCTTGATGAAGACCAAAGCAAAAGATATGACCAAGGGATCTTTGAGTTTGGAGTCGCATCACCCATGTTTGTGCCTCTAACATCGGCTGCCATTGTCAACTTGGCTGCATTTGCTTGGGGACATGTAGAGGCTTTCAAAGGCAGCAATGGCTTGGAGGGGATGTTCTTACAGATGTTTATAGCTGGTTTTGGCGTTGTGAATTGTATACCAATTTATGAAGCCATCATCAATAGGAGTGACAAAGGGAGAATTCCTACAAAAACGATTATGGTTTCATTACTCGTAGCTTTTGCTCTTTACGTAGTGGCTTATGTTACTCTTTTAAGTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009833 GO:0009987 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0016759 GO:0022402 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046527 GO:0051273 GO:0051274 GO:0051301 GO:0061640 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901576 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cellulose_synt

Protein Analysis

736

Amino Acids

83.23

Weight (kDa)

6.3

Isoelectric Point (pI)

35.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cellulose_synt	PF03552	103 - 387	1.5e-85	Cellulose synthase
Cellulose_synt	PF03552	408 - 728	1.5e-55	Cellulose synthase
Glyco_trans_2_3	PF13632	441 - 544	2.3e-08	Glycosyl transferase family group 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23990 AT4G23990 AT4G24000 AT4G24000 AT4G24010
fragaria_vesca	FvH4_5g11680
malus_domestica	MD14G1132000.v1.1 MD14G1132200.v1.1 MD14G1132300.v1.1
prunus_persica	Prupe.5G123500_v2.0.a1 Prupe.5G123600_v2.0.a1 Prupe.5G123700_v2.0.a1 Prupe.5G123800_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1 Prupe.5G124000_v2.0.a1
pyrus_communis	pycom06g10420
rosa_chinensis	RchiOBHm_Chr7g0186101
rosa_laevigata	RLG00000004864
rosa_multiflora	Rmu_co8339917.1_g000001 Rmu_sc0000194.1_g000028
rosa_roxburghii	Rroxscaffold_3G00268430
rosa_rugosa	Rorug06G0472200
rosa_samantha	Rh7AG069600 Rh7BG085500 Rh7CG078600 Rh7DG078600
rosa_wichuraiana	Rw7G006540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	1 cut(s)	1464
AccI	GTMKAC	4 cut(s)	5, 645, 1235, 2083
AccII	CGCG	1 cut(s)	1026
AciI	CCGC	6 cut(s)	70, 144, 250, 746, 1026, 1268
AcsI	RAATTY	3 cut(s)	279, 1188, 2127
AfaI	GTAC	4 cut(s)	596, 926, 1682, 1823
AfiI	CCNNNNNNNGG	6 cut(s)	669, 983, 1464, 1483, 1543, 1854
AflIII	ACRYGT	2 cut(s)	921, 1999
AgsI	TTSAA	4 cut(s)	211, 1141, 1861, 2014
AloI	GAACNNNNNNTCC	2 cut(s)	2024, 2056
AluBI	AGCT	9 cut(s)	227, 539, 845, 878, 1621, 1625, 2060, 2165, 2208
AluI	AGCT	9 cut(s)	227, 539, 845, 878, 1621, 1625, 2060, 2165, 2208
Alw21I	GWGCWC	1 cut(s)	1449
Alw26I	GTCTC	2 cut(s)	808, 1663
AoxI	GGCC	6 cut(s)	22, 1109, 1474, 1534, 1546, 1574
ApeKI	GCWGC	5 cut(s)	93, 470, 1964, 1982, 2019
ApoI	RAATTY	3 cut(s)	279, 1188, 2127
AseI	ATTAAT	1 cut(s)	1080
AspLEI	GCGC	3 cut(s)	98, 895, 958
AspS9I	GGNCC	7 cut(s)	1109, 1163, 1467, 1527, 1534, 1546, 1575
AsuC2I	CCSGG	1 cut(s)	302
AsuHPI	GGTGA	7 cut(s)	110, 160, 166, 208, 391, 1173, 1929
AsuII	TTCGAA	1 cut(s)	286
AsuNHI	GCTAGC	1 cut(s)	1621
AvaII	GGWCC	3 cut(s)	1163, 1467, 1527
AxyI	CCTNAGG	1 cut(s)	1086
BaeGI	GKGCMC	2 cut(s)	853, 1792
BamHI	GGATCC	4 cut(s)	973, 986, 1700, 1811
BanI	GGYRCC	1 cut(s)	848
BarI	GAAGNNNNNNTAC	2 cut(s)	230, 262
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	3 cut(s)	558, 1678, 1893
Bbv12I	GWGCWC	1 cut(s)	1449
BbvCI	CCTCAGC	2 cut(s)	576, 1014
BbvI	GCAGC	5 cut(s)	80, 457, 1951, 1969, 2031
BceAI	ACGGC	3 cut(s)	37, 384, 1339
BcgI	CGANNNNNNTGC	2 cut(s)	679, 713
BciVI	GTATCC	1 cut(s)	992
BcnI	CCSGG	1 cut(s)	302
BcoDI	GTCTC	2 cut(s)	808, 1663
BfaI	CTAG	6 cut(s)	104, 561, 1401, 1622, 1721, 1869
BfmI	CTRYAG	2 cut(s)	502, 726
BfuI	GTATCC	1 cut(s)	992
BisI	GCNGC	6 cut(s)	94, 471, 1269, 1965, 1983, 2020
BlsI	GCNGC	6 cut(s)	95, 472, 1270, 1966, 1984, 2021
Bme1390I	CCNGG	1 cut(s)	302
Bme18I	GGWCC	3 cut(s)	1163, 1467, 1527
BmgT120I	GGNCC	7 cut(s)	1109, 1163, 1467, 1527, 1534, 1546, 1575
BmiI	GGNNCC	8 cut(s)	345, 850, 975, 988, 1110, 1665, 1702, 1813
BmrFI	CCNGG	1 cut(s)	302
BmrI	ACTGGG	1 cut(s)	1306
BmsI	GCATC	3 cut(s)	1121, 1411, 1943
BmtI	GCTAGC	1 cut(s)	1625
BmuI	ACTGGG	1 cut(s)	1306
BpiI	GAAGAC	3 cut(s)	558, 1678, 1893
BpmI	CTGGAG	1 cut(s)	790
Bpu10I	CCTNAGC	2 cut(s)	576, 1014
Bpu14I	TTCGAA	1 cut(s)	286
BpuEI	CTTGAG	1 cut(s)	1502
BpuMI	CCSGG	1 cut(s)	302
Bsa29I	ATCGAT	1 cut(s)	699
BsaAI	YACGTR	3 cut(s)	658, 1003, 2179
BsaBI	GATNNNNATC	1 cut(s)	1378
BsaI	GGTCTC	1 cut(s)	1663
BsaJI	CCNNGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
BsaWI	WCCGGW	1 cut(s)	662
Bsc4I	CCNNNNNNNGG	6 cut(s)	669, 983, 1464, 1483, 1543, 1854
Bse1I	ACTGG	3 cut(s)	494, 1301, 1354
Bse21I	CCTNAGG	1 cut(s)	1086
Bse3DI	GCAATG	2 cut(s)	1370, 2029
Bse8I	GATNNNNATC	1 cut(s)	1378
BseCI	ATCGAT	1 cut(s)	699
BseDI	CCNNGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
BseJI	GATNNNNATC	1 cut(s)	1378
BseLI	CCNNNNNNNGG	6 cut(s)	669, 983, 1464, 1483, 1543, 1854
BseMI	GCAATG	2 cut(s)	1370, 2029
BseMII	CTCAG	6 cut(s)	561, 567, 692, 1028, 1077, 1230
BseNI	ACTGG	3 cut(s)	494, 1301, 1354
BseRI	GAGGAG	3 cut(s)	125, 170, 1619
BseSI	GKGCMC	2 cut(s)	853, 1792
BseXI	GCAGC	5 cut(s)	80, 457, 1951, 1969, 2031
BseYI	CCCAGC	2 cut(s)	711, 1617
BsgI	GTGCAG	1 cut(s)	1025
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
BshNI	GGYRCC	1 cut(s)	848
BshVI	ATCGAT	1 cut(s)	699
BsiHKAI	GWGCWC	1 cut(s)	1449
BsiSI	CCGG	2 cut(s)	302, 663
BslFI	GGGAC	2 cut(s)	516, 2010
BslI	CCNNNNNNNGG	6 cut(s)	669, 983, 1464, 1483, 1543, 1854
BsmAI	GTCTC	2 cut(s)	808, 1663
BsmFI	GGGAC	2 cut(s)	516, 2010
BsmI	GAATGC	1 cut(s)	1521
BsnI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
Bso31I	GGTCTC	1 cut(s)	1663
Bsp119I	TTCGAA	1 cut(s)	286
Bsp1286I	GDGCHC	3 cut(s)	853, 1449, 1792
Bsp143I	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
Bsp19I	CCATGG	3 cut(s)	1530, 1667, 1852
BspACI	CCGC	6 cut(s)	70, 144, 250, 746, 1026, 1268
BspANI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
BspCNI	CTCAG	6 cut(s)	562, 568, 691, 1027, 1078, 1231
BspDI	ATCGAT	1 cut(s)	699
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	8 cut(s)	345, 850, 975, 988, 1110, 1665, 1702, 1813
BspMAI	CTGCAG	1 cut(s)	506
BspOI	GCTAGC	1 cut(s)	1625
BspT104I	TTCGAA	1 cut(s)	286
BspT107I	GGYRCC	1 cut(s)	848
BspTNI	GGTCTC	1 cut(s)	1663
BsrDI	GCAATG	2 cut(s)	1370, 2029
BsrI	ACTGG	3 cut(s)	494, 1301, 1354
BssECI	CCNNGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
BssMI	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
BssNAI	GTATAC	1 cut(s)	2084
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
Bst1107I	GTATAC	1 cut(s)	2084
Bst2BI	CACGAG	1 cut(s)	951
Bst4CI	ACNGT	5 cut(s)	650, 730, 752, 917, 1600
Bst6I	CTCTTC	3 cut(s)	36, 57, 80
BstAPI	GCANNNNNTGC	1 cut(s)	479
BstBAI	YACGTR	3 cut(s)	658, 1003, 2179
BstBI	TTCGAA	1 cut(s)	286
BstC8I	GCNNGC	3 cut(s)	225, 1273, 1623
BstDEI	CTNAG	7 cut(s)	570, 576, 678, 1014, 1086, 1239, 1497
BstDSI	CCRYGG	3 cut(s)	1530, 1667, 1852
BstEII	GGTNACC	1 cut(s)	492
BstENI	CCTNNNNNAGG	1 cut(s)	1481
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	3 cut(s)	98, 895, 958
BstKTI	GATC	9 cut(s)	334, 440, 699, 721, 976, 989, 1703, 1814, 1917
BstMAI	GTCTC	2 cut(s)	808, 1663
BstMBI	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
BstMWI	GCNNNNNNNGC	5 cut(s)	104, 479, 1565, 1988, 2025
BstNSI	RCATGY	2 cut(s)	925, 2003
BstPI	GGTNACC	1 cut(s)	492
BstSCI	CCNGG	1 cut(s)	300
BstSFI	CTRYAG	2 cut(s)	502, 726
BstSLI	GKGCMC	2 cut(s)	853, 1792
BstSNI	TACGTA	2 cut(s)	658, 2179
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	5 cut(s)	80, 457, 1951, 1969, 2031
BstV2I	GAAGAC	3 cut(s)	558, 1678, 1893
BstX2I	RGATCY	5 cut(s)	973, 986, 1700, 1811, 1914
BstXI	CCANNNNNNTGG	1 cut(s)	1758
BstYI	RGATCY	5 cut(s)	973, 986, 1700, 1811, 1914
BstZ17I	GTATAC	1 cut(s)	2084
Bsu15I	ATCGAT	1 cut(s)	699
Bsu36I	CCTNAGG	1 cut(s)	1086
BsuI	GTATCC	1 cut(s)	992
BsuRI	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
BsuTUI	ATCGAT	1 cut(s)	699
BtgI	CCRYGG	3 cut(s)	1530, 1667, 1852
BtgZI	GCGATG	1 cut(s)	1477
BtsI	GCAGTG	1 cut(s)	324
BtsIMutI	CAGTG	5 cut(s)	324, 420, 487, 655, 1347
Cac8I	GCNNGC	3 cut(s)	225, 1273, 1623
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	3 cut(s)	98, 895, 958
Cfr13I	GGNCC	7 cut(s)	1109, 1163, 1467, 1527, 1534, 1546, 1575
ClaI	ATCGAT	1 cut(s)	699
Csp6I	GTAC	4 cut(s)	595, 925, 1681, 1822
CspCI	CAANNNNNGTGG	4 cut(s)	1101, 1136, 1757, 1792
CviQI	GTAC	4 cut(s)	595, 925, 1681, 1822
DdeI	CTNAG	7 cut(s)	570, 576, 678, 1014, 1086, 1239, 1497
DpnI	GATC	9 cut(s)	333, 439, 698, 720, 975, 988, 1702, 1813, 1916
DpnII	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
DraI	TTTAAA	1 cut(s)	841
Eam1104I	CTCTTC	3 cut(s)	36, 57, 80
EarI	CTCTTC	3 cut(s)	36, 57, 80
EciI	GGCGGA	1 cut(s)	761
Eco105I	TACGTA	2 cut(s)	658, 2179
Eco130I	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
Eco147I	AGGCCT	1 cut(s)	1476
Eco31I	GGTCTC	1 cut(s)	1663
Eco32I	GATATC	1 cut(s)	769
Eco47I	GGWCC	3 cut(s)	1163, 1467, 1527
Eco81I	CCTNAGG	1 cut(s)	1086
Eco91I	GGTNACC	1 cut(s)	492
EcoNI	CCTNNNNNAGG	1 cut(s)	1481
EcoO65I	GGTNACC	1 cut(s)	492
EcoRI	GAATTC	2 cut(s)	279, 2127
EcoRV	GATATC	1 cut(s)	769
EcoT14I	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
EcoT22I	ATGCAT	1 cut(s)	1570
ErhI	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
FaqI	GGGAC	2 cut(s)	516, 2010
FauNDI	CATATG	2 cut(s)	320, 1555
FblI	GTMKAC	4 cut(s)	5, 645, 1235, 2083
Fnu4HI	GCNGC	6 cut(s)	94, 471, 1269, 1965, 1983, 2020
Fsp4HI	GCNGC	6 cut(s)	94, 471, 1269, 1965, 1983, 2020
FspBI	CTAG	6 cut(s)	104, 561, 1401, 1622, 1721, 1869
GlaI	GCGC	3 cut(s)	97, 894, 957
GluI	GCNGC	6 cut(s)	94, 471, 1269, 1965, 1983, 2020
GsaI	CCCAGC	2 cut(s)	715, 1621
GsuI	CTGGAG	1 cut(s)	790
HaeIII	GGCC	6 cut(s)	24, 1111, 1476, 1536, 1548, 1576
HapII	CCGG	2 cut(s)	302, 663
HhaI	GCGC	3 cut(s)	98, 895, 958
Hin6I	GCGC	3 cut(s)	96, 893, 956
HinP1I	GCGC	3 cut(s)	96, 893, 956
HincII	GTYRAC	3 cut(s)	6, 364, 1975
HindII	GTYRAC	3 cut(s)	6, 364, 1975
HindIII	AAGCTT	2 cut(s)	225, 537
HinfI	GANTC	4 cut(s)	191, 1029, 1638, 1929
HpaII	CCGG	2 cut(s)	302, 663
HphI	GGTGA	7 cut(s)	110, 160, 166, 208, 391, 1173, 1929
Hpy166II	GTNNAC	9 cut(s)	6, 364, 619, 646, 1058, 1219, 1236, 1975, 2084
Hpy188III	TCNNGA	7 cut(s)	208, 533, 631, 807, 883, 1085, 1193
Hpy8I	GTNNAC	9 cut(s)	6, 364, 619, 646, 1058, 1219, 1236, 1975, 2084
Hpy99I	CGWCG	6 cut(s)	23, 362, 403, 431, 434, 1171
HpyAV	CCTTC	9 cut(s)	35, 169, 400, 957, 1364, 1618, 1730, 1810, 1835
HpyCH4III	ACNGT	5 cut(s)	650, 730, 752, 917, 1600
HpyCH4IV	ACGT	6 cut(s)	357, 657, 1002, 1514, 1683, 2178
HpyF10VI	GCNNNNNNNGC	5 cut(s)	104, 479, 1565, 1988, 2025
HpyF3I	CTNAG	7 cut(s)	570, 576, 678, 1014, 1086, 1239, 1497
HpySE526I	ACGT	6 cut(s)	357, 657, 1002, 1514, 1683, 2178
HspAI	GCGC	3 cut(s)	96, 893, 956
Kzo9I	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
LmnI	GCTCC	2 cut(s)	343, 1663
Lsp1109I	GCAGC	5 cut(s)	80, 457, 1951, 1969, 2031
LweI	GCATC	3 cut(s)	1121, 1411, 1943
MaeI	CTAG	6 cut(s)	104, 561, 1401, 1622, 1721, 1869
MaeII	ACGT	6 cut(s)	357, 657, 1002, 1514, 1683, 2178
MaeIII	GTNAC	6 cut(s)	492, 658, 917, 1864, 2114, 2191
MalI	GATC	9 cut(s)	333, 439, 698, 720, 975, 988, 1702, 1813, 1916
MboI	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
MflI	RGATCY	5 cut(s)	973, 986, 1700, 1811, 1914
MhlI	GDGCHC	3 cut(s)	853, 1449, 1792
MlyI	GAGTC	2 cut(s)	185, 1938
MmeI	TCCRAC	3 cut(s)	213, 422, 450
Mph1103I	ATGCAT	1 cut(s)	1570
MseI	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2201
MslI	CAYNNNNRTG	2 cut(s)	608, 1946
MspA1I	CMGCKG	1 cut(s)	878
MspI	CCGG	2 cut(s)	302, 663
MspR9I	CCNGG	1 cut(s)	302
Mva1269I	GAATGC	1 cut(s)	1521
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	5 cut(s)	104, 479, 1565, 1988, 2025
NciI	CCSGG	1 cut(s)	302
NcoI	CCATGG	3 cut(s)	1530, 1667, 1852
NdeI	CATATG	2 cut(s)	320, 1555
NdeII	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
NheI	GCTAGC	1 cut(s)	1621
NlaIV	GGNNCC	8 cut(s)	345, 850, 975, 988, 1110, 1665, 1702, 1813
NmuCI	GTSAC	3 cut(s)	917, 1864, 2114
NsiI	ATGCAT	1 cut(s)	1570
NspI	RCATGY	2 cut(s)	925, 2003
NspV	TTCGAA	1 cut(s)	286
PagI	TCATGA	1 cut(s)	882
PceI	AGGCCT	1 cut(s)	1476
PciI	ACATGT	2 cut(s)	921, 1999
PctI	GAATGC	1 cut(s)	1521
PfeI	GAWTC	2 cut(s)	1029, 1638
PflMI	CCANNNNNTGG	1 cut(s)	1464
PkrI	GCNGC	6 cut(s)	95, 472, 1270, 1966, 1984, 2021
PleI	GAGTC	2 cut(s)	185, 1937
PpsI	GAGTC	2 cut(s)	185, 1937
Ppu21I	YACGTR	3 cut(s)	658, 1003, 2179
PscI	ACATGT	2 cut(s)	921, 1999
PshBI	ATTAAT	1 cut(s)	1080
PspEI	GGTNACC	1 cut(s)	492
PspFI	CCCAGC	2 cut(s)	711, 1617
PspN4I	GGNNCC	8 cut(s)	345, 850, 975, 988, 1110, 1665, 1702, 1813
PspPI	GGNCC	7 cut(s)	1109, 1163, 1467, 1527, 1534, 1546, 1575
PstI	CTGCAG	1 cut(s)	506
PsuI	RGATCY	5 cut(s)	973, 986, 1700, 1811, 1914
PvuII	CAGCTG	1 cut(s)	878
RsaI	GTAC	4 cut(s)	596, 926, 1682, 1823
RsaNI	GTAC	4 cut(s)	595, 925, 1681, 1822
RseI	CAYNNNNRTG	2 cut(s)	608, 1946
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2201
SatI	GCNGC	6 cut(s)	94, 471, 1269, 1965, 1983, 2020
Sau3AI	GATC	9 cut(s)	331, 437, 696, 718, 973, 986, 1700, 1811, 1914
Sau96I	GGNCC	7 cut(s)	1109, 1163, 1467, 1527, 1534, 1546, 1575
SchI	GAGTC	2 cut(s)	185, 1938
ScrFI	CCNGG	1 cut(s)	302
SduI	GDGCHC	3 cut(s)	853, 1449, 1792
SfaNI	GCATC	3 cut(s)	1121, 1411, 1943
SfcI	CTRYAG	2 cut(s)	502, 726
SfuI	TTCGAA	1 cut(s)	286
SinI	GGWCC	3 cut(s)	1163, 1467, 1527
SmiMI	CAYNNNNRTG	2 cut(s)	608, 1946
SmlI	CTYRAG	1 cut(s)	1481
SmoI	CTYRAG	1 cut(s)	1481
SnaBI	TACGTA	2 cut(s)	658, 2179
SseBI	AGGCCT	1 cut(s)	1476
SsiI	CCGC	6 cut(s)	70, 144, 250, 746, 1026, 1268
SspMI	CTAG	6 cut(s)	104, 561, 1401, 1622, 1721, 1869
StuI	AGGCCT	1 cut(s)	1476
StyD4I	CCNGG	1 cut(s)	300
StyI	CCWWGG	7 cut(s)	598, 1530, 1653, 1667, 1836, 1852, 1909
TaaI	ACNGT	5 cut(s)	650, 730, 752, 917, 1600
TaiI	ACGT	6 cut(s)	360, 660, 1005, 1517, 1686, 2181
TaqI	TCGA	5 cut(s)	5, 286, 630, 699, 868
TaqII	GACCGA	2 cut(s)	1221, 1515
TatI	WGTACW	1 cut(s)	924
TauI	GCSGC	1 cut(s)	1271
TfiI	GAWTC	2 cut(s)	1029, 1638
Tru1I	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2201
Tru9I	TTAA	7 cut(s)	585, 794, 840, 855, 905, 1080, 2201
TscAI	CASTG	5 cut(s)	331, 420, 494, 655, 1354
TseFI	GTSAC	3 cut(s)	917, 1864, 2114
TseI	GCWGC	5 cut(s)	93, 470, 1964, 1982, 2019
Tsp45I	GTSAC	3 cut(s)	917, 1864, 2114
TspGWI	ACGGA	3 cut(s)	416, 447, 1155
TspRI	CASTG	5 cut(s)	331, 420, 494, 655, 1354
Van91I	CCANNNNNTGG	1 cut(s)	1464
VpaK11BI	GGWCC	3 cut(s)	1163, 1467, 1527
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	1 cut(s)	1481
XapI	RAATTY	3 cut(s)	279, 1188, 2127
XceI	RCATGY	2 cut(s)	925, 2003
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1975
XmiI	GTMKAC	4 cut(s)	5, 645, 1235, 2083
XspI	CTAG	6 cut(s)	104, 561, 1401, 1622, 1721, 1869
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.