RLG00000004951

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0014089
Physical Location & Seq
Forward (+)
63938690 .. 63940075
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004951

Sequence Viewer

Length: 1386 bp
ATGAAGGCTTCAAAATCCATCTCTCCCTTCAGGCTTTCCTCTCTTCTACGCATCCAAAAGGACCCAGCTCTAGCCCTCCAACTCTTCCAAAACCCTAACCCTGATTCAAACCCCCAACCCCAAAAGCAATTTCGCTACTCTCTTCTTTCCTACGACCTCATAATCTCCAAGCTCGGCCGCGCCAAAATGTTCGACCAATTGGAGCAAATCCTCCACCAAATGAAGCAAGAAACGCGTTTTGCTCCGCCCGAAATCATCTTCTGCAATGTCATGTCATACTACGGCCGGGCTCGTCTCTCTGACCGTGCACTCCAAGTGTTCGATGAAATGCCTTCTTTCCGTTGCCAGCGGACTATCAAATCATTCAATTCATTGCTAAATGCGCTTTTCAAATGTGGGAAATTTGAGAAGATGAAGAAGGTCTTGGAGGGGATTGAGGATTATGGGACCCCCGATGCGTGTACTTACAATATATTGATCAAGGCTTTTTGTGGGAGTGAGGATTTGGATAATGCACGGAAGGTGTTTGATGAAATGTGCAGCAAGGGTCTTCAACCGAGTGATGTGACATTGGGGACTTTAGTTCACAAGCTTTGTTCGGATTCTAGGGTGAAAGAAGCTTTGGAGTTGAAAGAGGATTGGGAACGCGTTCATGGAGTTTTGCCTAATGGGTTCGTGTATGCGTCGTTGATGAAAGGACTTTGTGGGATTGGTGAAATGGCATTGGCTTTTGGGCTTAAGGATGAGATGGTAAGGAAGAACATTCGGTTGGATGCAGCAGTTTATTCTACTTTGATCAGTGCGCTTCTAAAGGCCGGTAGGAGAGGAGAGGTTCCGGGTCTTTTGAAGGAAATGAGCGAGTATGGGTGCGAGCCAAATACTGTGACTTACAATGCAATGATTCATGGGTATTGTAAGGAGAAGGATTTCGAGGCAGCGTACAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAGACCAGATGCTATTAGTTACAATGTGATTATTGATGCATTGTGCAAAGGAGGGAAATGGAGCGAGGCCAATCTGTTCTTTCAAGATTTACCAAGGCGCGGGTGCCATCCTGATGTTCTTTCATATCGAATGCTATTTAGTGGACTTTGTGATTGCGGACAGTTTAAGGAAGCAGCATTTGTCTTAGATGAGATGATCTTTAAGGGTTGCGCGCCCCATTATGCATGGACGCATAAACTTGTTGAGGGTTTGTGTCAGGAAGGTAATATGGAGTTGTTAGGGACAGTTTTAAGTAGCCTGGAAAAGGCAAATGTTCTTCATGGAGATACCTGGAGGATGGTCATTTCTACGCTATGCAAGGAGAAGCCTTCAGATGTGTCTGAGCTCATCGATACTTTGGCAATGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

462

Amino Acids

52.03

Weight (kDa)

6.72

Isoelectric Point (pI)

34.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 119 - 164 3.8e-09 PPR repeat family
PPR_1 PF12854 150 - 179 1.1e-09 PPR repeat
PPR_2 PF13041 151 - 199 9.9e-14 PPR repeat family
PPR PF01535 155 - 184 8.7e-07 PPR repeat
PPR_long PF17177 167 - 278 8.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 222 - 271 9.8e-09 PPR repeat family
PPR_3 PF13812 246 - 302 1.4e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 258 - 303 1.2e-10 PPR repeat family
PPR_3 PF13812 281 - 339 1.5e-14 Pentatricopeptide repeat domain
PPR_1 PF12854 289 - 321 1.7e-13 PPR repeat
PPR_2 PF13041 292 - 341 7.3e-22 PPR repeat family
PPR PF01535 295 - 325 1.2e-10 PPR repeat
PPR_1 PF12854 323 - 352 1.2e-07 PPR repeat
PPR_2 PF13041 327 - 376 1e-14 PPR repeat family
PPR PF01535 330 - 360 7.4e-06 PPR repeat
PPR_1 PF12854 358 - 390 9.3e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014089)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53330 AT1G53330
fragaria_vesca FvH4_5g12530
malus_domestica MD14G1223500.v1.1
prunus_persica Prupe.5G218700_v2.0.a1
pyrus_communis pycom06g18980 pycom14g18480
rosa_chinensis RchiOBHm_Chr7g0184831
rosa_laevigata RLG00000004951
rosa_multiflora Rmu_ssc0000289.1_g000014
rosa_roxburghii Rroxscaffold_3G00269350
rosa_rugosa Rorug06G0465200
rosa_samantha Rh7AG077700 Rh7BG069600 Rh7CG070400 Rh7DG069800
rosa_wichuraiana Rw7G005770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1077
AccI GTMKAC 1 cut(s) 976
AccII CGCG 5 cut(s) 180, 235, 648, 1074, 1187
AciI CCGC 5 cut(s) 178, 245, 349, 1074, 1131
AcoI YGGCCR 2 cut(s) 175, 283
AcsI RAATTY 1 cut(s) 401
AcuI CTGAAG 2 cut(s) 13, 1329
AfaI GTAC 2 cut(s) 463, 941
AfiI CCNNNNNNNGG 2 cut(s) 1073, 1279
AflII CTTAAG 1 cut(s) 737
AflIII ACRYGT 2 cut(s) 233, 646
AgsI TTSAA 8 cut(s) 12, 108, 367, 391, 554, 631, 847, 1058
AjnI CCWGG 2 cut(s) 1272, 1304
AjuI GAANNNNNNNTTGG 8 cut(s) 114, 146, 407, 439, 605, 637, 752, 784
AluBI AGCT 5 cut(s) 68, 172, 592, 620, 1360
AluI AGCT 5 cut(s) 68, 172, 592, 620, 1360
Alw21I GWGCWC 2 cut(s) 310, 1362
Alw26I GTCTC 1 cut(s) 299
Alw44I GTGCAC 1 cut(s) 306
AoxI GGCC 4 cut(s) 175, 283, 813, 1041
ApaLI GTGCAC 1 cut(s) 306
ApeKI GCWGC 4 cut(s) 540, 776, 935, 1148
ApoI RAATTY 1 cut(s) 401
Asp700I GAANNNNTTC 2 cut(s) 648, 926
AspLEI GCGC 6 cut(s) 182, 385, 805, 1074, 1187, 1189
AspS9I GGNCC 2 cut(s) 61, 447
AsuC2I CCSGG 2 cut(s) 287, 837
AsuHPI GGTGA 2 cut(s) 622, 725
AvaII GGWCC 2 cut(s) 61, 447
BaeGI GKGCMC 1 cut(s) 310
BanI GGYRCC 1 cut(s) 1077
BanII GRGCYC 2 cut(s) 292, 1362
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 2 cut(s) 310, 1362
BbvI GCAGC 4 cut(s) 552, 788, 947, 1160
BccI CCATC 5 cut(s) 26, 742, 952, 1089, 1306
BceAI ACGGC 1 cut(s) 298
BciT130I CCWGG 2 cut(s) 1274, 1306
BclI TGATCA 2 cut(s) 477, 795
BcnI CCSGG 2 cut(s) 287, 837
BcoDI GTCTC 1 cut(s) 299
BfaI CTAG 2 cut(s) 71, 606
BfrI CTTAAG 1 cut(s) 737
BisI GCNGC 5 cut(s) 178, 541, 777, 936, 1149
BlsI GCNGC 5 cut(s) 179, 542, 778, 937, 1150
Bme1390I CCNGG 4 cut(s) 287, 837, 1274, 1306
Bme18I GGWCC 2 cut(s) 61, 447
BmgT120I GGNCC 2 cut(s) 61, 447
BmiI GGNNCC 5 cut(s) 63, 448, 449, 834, 1079
BmrFI CCNGG 4 cut(s) 287, 837, 1274, 1306
BmsI GCATC 5 cut(s) 60, 445, 763, 973, 1000
BpiI GAAGAC 1 cut(s) 542
BpmI CTGGAG 1 cut(s) 1327
BpuMI CCSGG 2 cut(s) 287, 837
Bsa29I ATCGAT 1 cut(s) 1365
BsaJI CCNNGG 1 cut(s) 1067
BsaXI ACNNNNNCTCC 2 cut(s) 956, 986
Bsc4I CCNNNNNNNGG 2 cut(s) 1073, 1279
Bse118I RCCGGY 1 cut(s) 815
Bse3DI GCAATG 4 cut(s) 271, 371, 903, 1383
BseBI CCWGG 2 cut(s) 1274, 1306
BseCI ATCGAT 1 cut(s) 1365
BseDI CCNNGG 1 cut(s) 1067
BseGI GGATG 6 cut(s) 51, 748, 778, 958, 1081, 1317
BseLI CCNNNNNNNGG 2 cut(s) 1073, 1279
BseMI GCAATG 4 cut(s) 271, 371, 903, 1383
BseMII CTCAG 1 cut(s) 1347
BsePI GCGCGC 1 cut(s) 1185
BseRI GAGGAG 1 cut(s) 840
BseSI GKGCMC 1 cut(s) 310
BseX3I CGGCCG 2 cut(s) 175, 283
BseXI GCAGC 4 cut(s) 552, 788, 947, 1160
BseYI CCCAGC 1 cut(s) 64
BsgI GTGCAG 1 cut(s) 559
Bsh1236I CGCG 5 cut(s) 180, 235, 648, 1074, 1187
Bsh1285I CGRYCG 2 cut(s) 178, 286
BshFI GGCC 4 cut(s) 177, 285, 815, 1043
BshNI GGYRCC 1 cut(s) 1077
BshVI ATCGAT 1 cut(s) 1365
BsiEI CGRYCG 2 cut(s) 178, 286
BsiHKAI GWGCWC 2 cut(s) 310, 1362
BsiSI CCGG 3 cut(s) 286, 816, 836
BslFI GGGAC 3 cut(s) 460, 589, 1270
BslI CCNNNNNNNGG 2 cut(s) 1073, 1279
BsmAI GTCTC 1 cut(s) 299
BsmBI CGTCTC 1 cut(s) 299
BsmFI GGGAC 3 cut(s) 460, 589, 1270
BsmI GAATGC 1 cut(s) 1110
BsnI GGCC 4 cut(s) 177, 285, 815, 1043
Bsp1286I GDGCHC 3 cut(s) 292, 310, 1362
Bsp143I GATC 3 cut(s) 477, 795, 1170
BspACI CCGC 5 cut(s) 178, 245, 349, 1074, 1131
BspANI GGCC 4 cut(s) 177, 285, 815, 1043
BspCNI CTCAG 1 cut(s) 1348
BspDI ATCGAT 1 cut(s) 1365
BspFNI CGCG 5 cut(s) 180, 235, 648, 1074, 1187
BspLI GGNNCC 5 cut(s) 63, 448, 449, 834, 1079
BspT107I GGYRCC 1 cut(s) 1077
BspTI CTTAAG 1 cut(s) 737
BsrDI GCAATG 4 cut(s) 271, 371, 903, 1383
BsrFI RCCGGY 1 cut(s) 815
BssAI RCCGGY 1 cut(s) 815
BssECI CCNNGG 1 cut(s) 1067
BssHII GCGCGC 1 cut(s) 1185
BssMI GATC 3 cut(s) 477, 795, 1170
BssT1I CCWWGG 1 cut(s) 1067
Bst2UI CCWGG 2 cut(s) 1274, 1306
Bst4CI ACNGT 4 cut(s) 305, 883, 1137, 1261
Bst6I CTCTTC 3 cut(s) 48, 89, 147
BstAFI CTTAAG 1 cut(s) 737
BstC8I GCNNGC 3 cut(s) 347, 872, 1187
BstDEI CTNAG 2 cut(s) 1159, 1356
BstENI CCTNNNNNAGG 1 cut(s) 1277
BstF5I GGATG 6 cut(s) 51, 748, 778, 958, 1081, 1317
BstFNI CGCG 5 cut(s) 180, 235, 648, 1074, 1187
BstHHI GCGC 6 cut(s) 182, 385, 805, 1074, 1187, 1189
BstKTI GATC 3 cut(s) 480, 798, 1173
BstMAI GTCTC 1 cut(s) 299
BstMBI GATC 3 cut(s) 477, 795, 1170
BstMCI CGRYCG 2 cut(s) 178, 286
BstMWI GCNNNNNNNGC 2 cut(s) 232, 382
BstNI CCWGG 2 cut(s) 1274, 1306
BstSCI CCNGG 4 cut(s) 285, 835, 1272, 1304
BstSLI GKGCMC 1 cut(s) 310
BstUI CGCG 5 cut(s) 180, 235, 648, 1074, 1187
BstV1I GCAGC 4 cut(s) 552, 788, 947, 1160
BstV2I GAAGAC 1 cut(s) 542
BstZI CGGCCG 2 cut(s) 175, 283
Bsu15I ATCGAT 1 cut(s) 1365
BsuRI GGCC 4 cut(s) 177, 285, 815, 1043
BsuTUI ATCGAT 1 cut(s) 1365
BtsCI GGATG 6 cut(s) 51, 748, 778, 958, 1081, 1317
BtsIMutI CAGTG 1 cut(s) 805
Cac8I GCNNGC 3 cut(s) 347, 872, 1187
CfoI GCGC 6 cut(s) 182, 385, 805, 1074, 1187, 1189
Cfr10I RCCGGY 1 cut(s) 815
Cfr13I GGNCC 2 cut(s) 61, 447
ClaI ATCGAT 1 cut(s) 1365
CseI GACGC 2 cut(s) 672, 1213
Csp6I GTAC 2 cut(s) 462, 940
CviAII CATG 5 cut(s) 271, 653, 905, 1200, 1295
CviQI GTAC 2 cut(s) 462, 940
DdeI CTNAG 2 cut(s) 1159, 1356
DpnI GATC 3 cut(s) 479, 797, 1172
DpnII GATC 3 cut(s) 477, 795, 1170
EaeI YGGCCR 2 cut(s) 175, 283
EagI CGGCCG 2 cut(s) 175, 283
Eam1104I CTCTTC 3 cut(s) 48, 89, 147
EarI CTCTTC 3 cut(s) 48, 89, 147
EciI GGCGGA 1 cut(s) 234
Ecl136II GAGCTC 1 cut(s) 1360
EclXI CGGCCG 2 cut(s) 175, 283
Eco130I CCWWGG 1 cut(s) 1067
Eco24I GRGCYC 2 cut(s) 292, 1362
Eco47I GGWCC 2 cut(s) 61, 447
Eco52I CGGCCG 2 cut(s) 175, 283
Eco53kI GAGCTC 1 cut(s) 1360
Eco57I CTGAAG 2 cut(s) 13, 1329
EcoICRI GAGCTC 1 cut(s) 1360
EcoNI CCTNNNNNAGG 1 cut(s) 1277
EcoO109I RGGNCCY 2 cut(s) 61, 447
EcoRII CCWGG 2 cut(s) 1272, 1304
EcoT14I CCWWGG 1 cut(s) 1067
EcoT22I ATGCAT 2 cut(s) 1015, 1201
EcoT38I GRGCYC 2 cut(s) 292, 1362
ErhI CCWWGG 1 cut(s) 1067
Esp3I CGTCTC 1 cut(s) 299
FaeI CATG 5 cut(s) 274, 656, 908, 1203, 1298
FalI AAGNNNNNCTT 2 cut(s) 407, 439
FaqI GGGAC 3 cut(s) 460, 589, 1270
FatI CATG 5 cut(s) 270, 652, 904, 1199, 1294
FauI CCCGC 1 cut(s) 1067
FbaI TGATCA 2 cut(s) 477, 795
FblI GTMKAC 1 cut(s) 976
Fnu4HI GCNGC 5 cut(s) 178, 541, 777, 936, 1149
FokI GGATG 6 cut(s) 38, 755, 785, 965, 1068, 1324
FriOI GRGCYC 2 cut(s) 292, 1362
Fsp4HI GCNGC 5 cut(s) 178, 541, 777, 936, 1149
FspBI CTAG 2 cut(s) 71, 606
GlaI GCGC 6 cut(s) 181, 384, 804, 1073, 1186, 1188
GluI GCNGC 5 cut(s) 178, 541, 777, 936, 1149
GsaI CCCAGC 1 cut(s) 68
GsuI CTGGAG 1 cut(s) 1327
HaeIII GGCC 4 cut(s) 177, 285, 815, 1043
HapII CCGG 3 cut(s) 286, 816, 836
HgaI GACGC 2 cut(s) 672, 1213
HhaI GCGC 6 cut(s) 182, 385, 805, 1074, 1187, 1189
Hin1II CATG 5 cut(s) 274, 656, 908, 1203, 1298
Hin6I GCGC 6 cut(s) 180, 383, 803, 1072, 1185, 1187
HinP1I GCGC 6 cut(s) 180, 383, 803, 1072, 1185, 1187
HindIII AAGCTT 2 cut(s) 590, 618
HinfI GANTC 3 cut(s) 104, 602, 901
HpaII CCGG 3 cut(s) 286, 816, 836
HphI GGTGA 2 cut(s) 622, 725
Hpy166II GTNNAC 5 cut(s) 308, 462, 586, 977, 1118
Hpy188I TCNGA 4 cut(s) 301, 601, 1348, 1357
Hpy188III TCNNGA 3 cut(s) 1058, 1085, 1232
Hpy8I GTNNAC 5 cut(s) 308, 462, 586, 977, 1118
Hpy99I CGWCG 1 cut(s) 688
HpyAV CCTTC 8 cut(s) 37, 342, 412, 514, 841, 916, 1229, 1353
HpyCH4III ACNGT 4 cut(s) 305, 883, 1137, 1261
HpyF10VI GCNNNNNNNGC 2 cut(s) 232, 382
HpyF3I CTNAG 2 cut(s) 1159, 1356
Hsp92II CATG 5 cut(s) 274, 656, 908, 1203, 1298
HspAI GCGC 6 cut(s) 180, 383, 803, 1072, 1185, 1187
KflI GGGWCCC 1 cut(s) 447
Ksp22I TGATCA 2 cut(s) 477, 795
Kzo9I GATC 3 cut(s) 477, 795, 1170
LmnI GCTCC 3 cut(s) 202, 247, 1035
Lsp1109I GCAGC 4 cut(s) 552, 788, 947, 1160
LweI GCATC 5 cut(s) 60, 445, 763, 973, 1000
MaeI CTAG 2 cut(s) 71, 606
MaeIII GTNAC 3 cut(s) 565, 883, 992
MalI GATC 3 cut(s) 479, 797, 1172
MboI GATC 3 cut(s) 477, 795, 1170
MboII GAAGA 9 cut(s) 35, 76, 134, 250, 421, 427, 542, 769, 1283
MfeI CAATTG 1 cut(s) 197
MhlI GDGCHC 3 cut(s) 292, 310, 1362
MluCI AATT 4 cut(s) 128, 197, 367, 401
MluI ACGCGT 2 cut(s) 233, 646
MmeI TCCRAC 2 cut(s) 103, 750
Mph1103I ATGCAT 2 cut(s) 1015, 1201
MroXI GAANNNNTTC 2 cut(s) 648, 926
MseI TTAA 4 cut(s) 738, 1140, 1176, 1265
MslI CAYNNNNRTG 1 cut(s) 1086
MspA1I CMGCKG 1 cut(s) 349
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 3 cut(s) 286, 816, 836
MspR9I CCNGG 4 cut(s) 287, 837, 1274, 1306
MunI CAATTG 1 cut(s) 197
Mva1269I GAATGC 1 cut(s) 1110
MvaI CCWGG 2 cut(s) 1274, 1306
MvnI CGCG 5 cut(s) 180, 235, 648, 1074, 1187
MwoI GCNNNNNNNGC 2 cut(s) 232, 382
NciI CCSGG 2 cut(s) 287, 837
NdeII GATC 3 cut(s) 477, 795, 1170
NlaIII CATG 5 cut(s) 274, 656, 908, 1203, 1298
NlaIV GGNNCC 5 cut(s) 63, 448, 449, 834, 1079
NmeAIII GCCGAG 1 cut(s) 153
NmuCI GTSAC 2 cut(s) 565, 883
NsiI ATGCAT 2 cut(s) 1015, 1201
PauI GCGCGC 1 cut(s) 1185
PctI GAATGC 1 cut(s) 1110
PdmI GAANNNNTTC 2 cut(s) 648, 926
PfeI GAWTC 3 cut(s) 104, 602, 901
PkrI GCNGC 5 cut(s) 179, 542, 778, 937, 1150
PpuMI RGGWCCY 2 cut(s) 61, 447
Psp124BI GAGCTC 1 cut(s) 1362
Psp5II RGGWCCY 2 cut(s) 61, 447
Psp6I CCWGG 2 cut(s) 1272, 1304
PspFI CCCAGC 1 cut(s) 64
PspGI CCWGG 2 cut(s) 1272, 1304
PspN4I GGNNCC 5 cut(s) 63, 448, 449, 834, 1079
PspPI GGNCC 2 cut(s) 61, 447
PspPPI RGGWCCY 2 cut(s) 61, 447
PteI GCGCGC 1 cut(s) 1185
RsaI GTAC 2 cut(s) 463, 941
RsaNI GTAC 2 cut(s) 462, 940
RseI CAYNNNNRTG 1 cut(s) 1086
SacI GAGCTC 1 cut(s) 1362
SaqAI TTAA 4 cut(s) 738, 1140, 1176, 1265
SatI GCNGC 5 cut(s) 178, 541, 777, 936, 1149
Sau3AI GATC 3 cut(s) 477, 795, 1170
Sau96I GGNCC 2 cut(s) 61, 447
ScrFI CCNGG 4 cut(s) 287, 837, 1274, 1306
SduI GDGCHC 3 cut(s) 292, 310, 1362
SfaNI GCATC 5 cut(s) 60, 445, 763, 973, 1000
SinI GGWCC 2 cut(s) 61, 447
SmiMI CAYNNNNRTG 1 cut(s) 1086
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
Sse9I AATT 4 cut(s) 128, 197, 367, 401
SsiI CCGC 5 cut(s) 178, 245, 349, 1074, 1131
SspMI CTAG 2 cut(s) 71, 606
SstI GAGCTC 1 cut(s) 1362
StyD4I CCNGG 4 cut(s) 285, 835, 1272, 1304
StyI CCWWGG 1 cut(s) 1067
TaaI ACNGT 4 cut(s) 305, 883, 1137, 1261
TaqI TCGA 5 cut(s) 192, 321, 930, 1102, 1365
TasI AATT 4 cut(s) 128, 197, 367, 401
TatI WGTACW 1 cut(s) 461
TauI GCSGC 1 cut(s) 180
TfiI GAWTC 3 cut(s) 104, 602, 901
Tru1I TTAA 4 cut(s) 738, 1140, 1176, 1265
Tru9I TTAA 4 cut(s) 738, 1140, 1176, 1265
TscAI CASTG 1 cut(s) 805
TseFI GTSAC 2 cut(s) 565, 883
TseI GCWGC 4 cut(s) 540, 776, 935, 1148
Tsp45I GTSAC 2 cut(s) 565, 883
TspGWI ACGGA 2 cut(s) 329, 532
TspRI CASTG 1 cut(s) 805
Vha464I CTTAAG 1 cut(s) 737
VneI GTGCAC 1 cut(s) 306
VpaK11BI GGWCC 2 cut(s) 61, 447
XagI CCTNNNNNAGG 1 cut(s) 1277
XapI RAATTY 1 cut(s) 401
XmiI GTMKAC 1 cut(s) 976
XmnI GAANNNNTTC 2 cut(s) 648, 926
XspI CTAG 2 cut(s) 71, 606
Zsp2I ATGCAT 2 cut(s) 1015, 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.