Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53330 AT1G53330 |
| fragaria_vesca | FvH4_5g12530 |
| malus_domestica | MD14G1223500.v1.1 |
| prunus_persica | Prupe.5G218700_v2.0.a1 |
| pyrus_communis | pycom06g18980 pycom14g18480 |
| rosa_chinensis | RchiOBHm_Chr7g0184831 |
| rosa_laevigata | RLG00000004951 |
| rosa_multiflora | Rmu_ssc0000289.1_g000014 |
| rosa_roxburghii | Rroxscaffold_3G00269350 |
| rosa_rugosa | Rorug06G0465200 |
| rosa_samantha | Rh7AG077700 Rh7BG069600 Rh7CG070400 Rh7DG069800 |
| rosa_wichuraiana | Rw7G005770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 27 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 175 |
| AjnI | CCWGG | 2 cut(s) | 168, 200 |
| AluBI | AGCT | 1 cut(s) | 256 |
| AluI | AGCT | 1 cut(s) | 256 |
| Alw21I | GWGCWC | 1 cut(s) | 258 |
| ApeKI | GCWGC | 1 cut(s) | 44 |
| AspLEI | GCGC | 1 cut(s) | 85 |
| BanII | GRGCYC | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 258 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BccI | CCATC | 1 cut(s) | 202 |
| BceAI | ACGGC | 1 cut(s) | 223 |
| BciT130I | CCWGG | 2 cut(s) | 170, 202 |
| BisI | GCNGC | 1 cut(s) | 45 |
| BlsI | GCNGC | 1 cut(s) | 46 |
| Bme1390I | CCNGG | 2 cut(s) | 170, 202 |
| BmrFI | CCNGG | 2 cut(s) | 170, 202 |
| BpmI | CTGGAG | 1 cut(s) | 223 |
| Bsa29I | ATCGAT | 1 cut(s) | 261 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 224, 254 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 175 |
| Bse3DI | GCAATG | 1 cut(s) | 279 |
| BseBI | CCWGG | 2 cut(s) | 170, 202 |
| BseCI | ATCGAT | 1 cut(s) | 261 |
| BseGI | GGATG | 1 cut(s) | 213 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 175 |
| BseMI | GCAATG | 1 cut(s) | 279 |
| BseMII | CTCAG | 1 cut(s) | 243 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BshVI | ATCGAT | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 1 cut(s) | 258 |
| BslFI | GGGAC | 1 cut(s) | 166 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 175 |
| BsmFI | GGGAC | 1 cut(s) | 166 |
| Bsp1286I | GDGCHC | 1 cut(s) | 258 |
| Bsp143I | GATC | 1 cut(s) | 66 |
| BspACI | CCGC | 1 cut(s) | 27 |
| BspCNI | CTCAG | 1 cut(s) | 244 |
| BspDI | ATCGAT | 1 cut(s) | 261 |
| BsrDI | GCAATG | 1 cut(s) | 279 |
| BssMI | GATC | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 2 cut(s) | 170, 202 |
| Bst4CI | ACNGT | 2 cut(s) | 33, 157 |
| BstDEI | CTNAG | 2 cut(s) | 55, 252 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 173 |
| BstF5I | GGATG | 1 cut(s) | 213 |
| BstHHI | GCGC | 1 cut(s) | 85 |
| BstKTI | GATC | 1 cut(s) | 69 |
| BstMBI | GATC | 1 cut(s) | 66 |
| BstNI | CCWGG | 2 cut(s) | 170, 202 |
| BstSCI | CCNGG | 2 cut(s) | 168, 200 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| Bsu15I | ATCGAT | 1 cut(s) | 261 |
| BsuTUI | ATCGAT | 1 cut(s) | 261 |
| BtsCI | GGATG | 1 cut(s) | 213 |
| CfoI | GCGC | 1 cut(s) | 85 |
| ClaI | ATCGAT | 1 cut(s) | 261 |
| CseI | GACGC | 1 cut(s) | 109 |
| CviAII | CATG | 1 cut(s) | 191 |
| CviJI | RGCY | 3 cut(s) | 168, 238, 256 |
| CviKI_1 | RGCY | 3 cut(s) | 168, 238, 256 |
| DdeI | CTNAG | 2 cut(s) | 55, 252 |
| DpnI | GATC | 1 cut(s) | 68 |
| DpnII | GATC | 1 cut(s) | 66 |
| Ecl136II | GAGCTC | 1 cut(s) | 256 |
| Eco24I | GRGCYC | 1 cut(s) | 258 |
| Eco53kI | GAGCTC | 1 cut(s) | 256 |
| EcoICRI | GAGCTC | 1 cut(s) | 256 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 173 |
| EcoRII | CCWGG | 2 cut(s) | 168, 200 |
| EcoT38I | GRGCYC | 1 cut(s) | 258 |
| FaeI | CATG | 1 cut(s) | 194 |
| FaiI | YATR | 5 cut(s) | 93, 105, 140, 192, 226 |
| FaqI | GGGAC | 1 cut(s) | 166 |
| FatI | CATG | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 1 cut(s) | 45 |
| FokI | GGATG | 1 cut(s) | 220 |
| FriOI | GRGCYC | 1 cut(s) | 258 |
| Fsp4HI | GCNGC | 1 cut(s) | 45 |
| GlaI | GCGC | 1 cut(s) | 84 |
| GluI | GCNGC | 1 cut(s) | 45 |
| GsuI | CTGGAG | 1 cut(s) | 223 |
| HgaI | GACGC | 1 cut(s) | 109 |
| HhaI | GCGC | 1 cut(s) | 85 |
| Hin1II | CATG | 1 cut(s) | 194 |
| Hin6I | GCGC | 1 cut(s) | 83 |
| HinP1I | GCGC | 1 cut(s) | 83 |
| Hpy166II | GTNNAC | 1 cut(s) | 14 |
| Hpy188I | TCNGA | 2 cut(s) | 244, 253 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 14 |
| HpyAV | CCTTC | 1 cut(s) | 125 |
| HpyCH4III | ACNGT | 2 cut(s) | 33, 157 |
| HpyCH4V | TGCA | 2 cut(s) | 95, 277 |
| HpyF3I | CTNAG | 2 cut(s) | 55, 252 |
| Hsp92II | CATG | 1 cut(s) | 194 |
| HspAI | GCGC | 1 cut(s) | 83 |
| Kzo9I | GATC | 1 cut(s) | 66 |
| LpnPI | CCDG | 5 cut(s) | 113, 155, 182, 187, 214 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| MalI | GATC | 1 cut(s) | 68 |
| MboI | GATC | 1 cut(s) | 66 |
| MboII | GAAGA | 1 cut(s) | 179 |
| MhlI | GDGCHC | 1 cut(s) | 258 |
| MnlI | CCTC | 2 cut(s) | 109, 198 |
| MseI | TTAA | 3 cut(s) | 36, 72, 161 |
| MspR9I | CCNGG | 2 cut(s) | 170, 202 |
| MvaI | CCWGG | 2 cut(s) | 170, 202 |
| NdeII | GATC | 1 cut(s) | 66 |
| NlaIII | CATG | 1 cut(s) | 194 |
| PkrI | GCNGC | 1 cut(s) | 46 |
| Psp124BI | GAGCTC | 1 cut(s) | 258 |
| Psp6I | CCWGG | 2 cut(s) | 168, 200 |
| PspGI | CCWGG | 2 cut(s) | 168, 200 |
| SacI | GAGCTC | 1 cut(s) | 258 |
| SaqAI | TTAA | 3 cut(s) | 36, 72, 161 |
| SatI | GCNGC | 1 cut(s) | 45 |
| Sau3AI | GATC | 1 cut(s) | 66 |
| ScrFI | CCNGG | 2 cut(s) | 170, 202 |
| SduI | GDGCHC | 1 cut(s) | 258 |
| SetI | ASST | 3 cut(s) | 136, 203, 258 |
| SgeI | CNNG | 8 cut(s) | 108, 122, 140, 181, 182, 203, 213, 214 |
| SsiI | CCGC | 1 cut(s) | 27 |
| SstI | GAGCTC | 1 cut(s) | 258 |
| StyD4I | CCNGG | 2 cut(s) | 168, 200 |
| TaaI | ACNGT | 2 cut(s) | 33, 157 |
| TaqI | TCGA | 1 cut(s) | 261 |
| Tru1I | TTAA | 3 cut(s) | 36, 72, 161 |
| Tru9I | TTAA | 3 cut(s) | 36, 72, 161 |
| TseI | GCWGC | 1 cut(s) | 44 |
| TspDTI | ATGAA | 1 cut(s) | 179 |
| TspGWI | ACGGA | 1 cut(s) | 112 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 173 |