Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005948

Physical Location & Seq

Genomic Coordinates Forward (+)

65349239 .. 65353065

Gene Structure 3827 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005143

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGGCTGCGTCAGCTCGAAGCAGACAGTGTCGGTGACGCCGGCGTTCGACCACTCGGGGGCGTTCAGGGACAATGTCGGCAATTCGGGTCGGAGCCGGGTCGGGGAGGCGGTGGTGAAGAAGAACAAGAAGAAGGGGGGTGAGTTGAGTGGGAGCGAGTTGGGTGAGTCCGGGAGAGCGAGTTCGAATATGAAGAAGAGTAATGGTTCTGAGTCGTTGAGTTTTCGGTTGAGTAATTTGCAGAGGTATGTGGAGGGGGAGCAGGTCGCCGCCGGTTGGCCGGCCTGGCTCAGCGCCGTCGCCGCCGAAGCCATTCAGGGCTGGGTCCCACTTCGCGCTGATGCCTTTGAGAAATTAGAGAAGATTAAATGTTACATGAAGCAGCTGTTATCTGGACTTGAACATTGTCACTCGCGGGGTGTAATGCATCGCGACATAAAAGGATCAAATCTTCTGGTGAACAATGAAGGAATTTTGAAGATGGCTGATTTTGGATTGGCAAACTTCTGTGATTCTGGGCACAAGCAACCCCTTACCAGTCGTGTTGTCACTTTGTGGTATCGTCCTCCTGAACTTTTGCTTGGATCAACTGCCTATGGAGCTTATATCGATCTCTGGAGTGTTGGCTGTGCATTTGCAGAACTCCTGGTTGGGAAACCTGTTCTTCAAGGGCGAACAGAGGTTGAACAATTACACAAGATTTTCAAGCTCTGTGGCTCCCCACCGGAAGAATACTGGAAAAAGTCCAAACTTCCACACGCAACTCTATTTAAACCCCAACAACCTTATGATAGTACTCTGCAGGAGACCTTTAAAGATTTGCCAGCTGCCACTTTTAACCTACTAGGGACTCTTCTTTCTGTAGAACCACACAAGCGTGGGACTGCCTCCTCTGCTCTTGCATCTGAGTATTTCAAAATGAAGCCTTATGCCTGTGATCCATCAAGCTTGCCAATTTACCCGCCTAGCAAAGAGATTGACGCAAAAAATCGGGAGGAGGCAAAGAGGAAAAAGATTGGTGGTAGAATTCGTGGAGGCGAAACAAGAAAGTCAACAAGAAAATCACATGGAATAAGTAAATTGGCACCAGTCGAGGACTTGGCAACCCAAGTGCAAGATTCATATAAAATTAATGGCACTAATGGACATATTACGAAGCAAGAAAATGGTGTCATAGTCAGGGAGTTGCCGAAGCCATCAGCTTCTAAAGCAGAAGAGGCTTCACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCATTAGAGGTTTCTACATCAAGTGGCTTTGCATGGGCAAAAAGACGACGAGATGATGCTTCTAGAAGATCTCATGCTCGATCTATTTCAAAAGGACACATATTTAACACAGTAGAACCTTCAATTGCAGTGCATACAAGGAAGAACTTCGACTCTAAGACGCATGAAAATGGGGAATACAGAGGGCGTACTGACTCTAGAGGGCATGATTCATACGAGATTGTTAAGCTAGCAATGCTGAATCAATGGGGCAAGCTTGAACGTCCAGATTCTTTCGATGCTTCTGATGGGTATCACTCGCAGGAATTATCAAGGGCACTTTATCAGAGAGAGGAAAGGGTGGCTGCTACTAAAAGTGATCTGAGTTTTCCACTTGATGATGAAGAAGACAAGGTTGAATTTTCAGGACCCTTGTTATCTCAACCCTATAAAGTTGATGAATTCTTAGAAAGGCATGAGCGCCACATCAGAAGGGCAACGCGGAACTCATGGTTCTATAGAGGTAAGAAGCAAGGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009966 GO:0009987 GO:0010646 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0097472 GO:0098542 GO:0140096 GO:1900424 GO:1900426 GO:1901564 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

596

Amino Acids

66.22

Weight (kDa)

9.37

Isoelectric Point (pI)

46.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	119 - 305	2.8e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	120 - 234	4.6e-13	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18670 AT1G18670 AT1G18670 AT1G74330 AT1G74330 AT1G74330
fragaria_vesca	FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470
malus_domestica	MD06G1198100.v1.1 MD14G1205700.v1.1
prunus_persica	Prupe.5G199000_v2.0.a1 Prupe.5G199000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0182181
rosa_laevigata	RLG00000005143
rosa_multiflora	Rmu_sc0000003.1_g000017
rosa_roxburghii	Rroxscaffold_3G00271440
rosa_rugosa	Rorug06G0445900 Rorug06G0445900
rosa_samantha	Rh7AG049000 Rh7BG048900 Rh7CG050300 Rh7DG048200
rosa_wichuraiana	Rw7G004000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	253
AccB1I	GGYRCC	1 cut(s)	1084
AccII	CGCG	4 cut(s)	336, 415, 432, 1747
AciI	CCGC	6 cut(s)	110, 270, 303, 415, 962, 1747
AclWI	GGATC	3 cut(s)	451, 592, 932
AcoI	YGGCCR	1 cut(s)	278
AcsI	RAATTY	4 cut(s)	471, 1026, 1664, 1706
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	555
AfaI	GTAC	2 cut(s)	796, 1456
AfiI	CCNNNNNNNGG	5 cut(s)	58, 103, 276, 1262, 1273
AflIII	ACRYGT	1 cut(s)	1225
AjnI	CCWGG	2 cut(s)	284, 645
AjuI	GAANNNNNNNTTGG	4 cut(s)	564, 596, 633, 665
AleI	CACNNNNGTG	1 cut(s)	876
AloI	GAACNNNNNNTCC	2 cut(s)	166, 198
AluBI	AGCT	9 cut(s)	15, 385, 602, 709, 827, 948, 1202, 1495, 1522
AluI	AGCT	9 cut(s)	15, 385, 602, 709, 827, 948, 1202, 1495, 1522
Alw26I	GTCTC	2 cut(s)	800, 1242
AlwI	GGATC	3 cut(s)	451, 592, 932
Ama87I	CYCGRG	1 cut(s)	55
AoxI	GGCC	3 cut(s)	278, 282, 1264
ApeKI	GCWGC	4 cut(s)	6, 382, 827, 1610
ApoI	RAATTY	4 cut(s)	471, 1026, 1664, 1706
AseI	ATTAAT	1 cut(s)	1131
Asp700I	GAANNNNTTC	2 cut(s)	312, 1412
AspLEI	GCGC	3 cut(s)	296, 338, 1728
AspS9I	GGNCC	3 cut(s)	325, 1265, 1673
AsuC2I	CCSGG	2 cut(s)	98, 172
AsuHPI	GGTGA	5 cut(s)	46, 127, 152, 176, 469
AsuII	TTCGAA	1 cut(s)	185
AsuNHI	GCTAGC	1 cut(s)	1495
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	2 cut(s)	325, 1673
BaeGI	GKGCMC	2 cut(s)	522, 1585
BanI	GGYRCC	1 cut(s)	1084
BbsI	GAAGAC	1 cut(s)	1659
BbvI	GCAGC	3 cut(s)	394, 814, 1597
BccI	CCATC	4 cut(s)	475, 949, 1204, 1547
BceAI	ACGGC	1 cut(s)	281
BciT130I	CCWGG	2 cut(s)	286, 647
BcnI	CCSGG	2 cut(s)	98, 172
BcoDI	GTCTC	2 cut(s)	800, 1242
BfaI	CTAG	5 cut(s)	845, 966, 1329, 1464, 1496
BfmI	CTRYAG	3 cut(s)	800, 861, 1762
BfoI	RGCGCY	2 cut(s)	297, 1729
BfuAI	ACCTGC	1 cut(s)	253
BglI	GCCNNNNNGGC	1 cut(s)	286
BglII	AGATCT	1 cut(s)	1334
BisI	GCNGC	6 cut(s)	7, 270, 303, 383, 828, 1611
BlpI	GCTNAGC	1 cut(s)	290
BlsI	GCNGC	6 cut(s)	8, 271, 304, 384, 829, 1612
BmcAI	AGTACT	1 cut(s)	796
Bme1390I	CCNGG	4 cut(s)	98, 172, 286, 647
Bme18I	GGWCC	2 cut(s)	325, 1673
BmeT110I	CYCGRG	1 cut(s)	55
BmgT120I	GGNCC	3 cut(s)	325, 1265, 1673
BmiI	GGNNCC	6 cut(s)	95, 326, 327, 718, 1086, 1675
BmrFI	CCNGG	4 cut(s)	98, 172, 286, 647
BmsI	GCATC	6 cut(s)	331, 436, 911, 1247, 1312, 1534
BmtI	GCTAGC	1 cut(s)	1499
BpiI	GAAGAC	1 cut(s)	1659
BpmI	CTGGAG	1 cut(s)	637
Bpu1102I	GCTNAGC	1 cut(s)	290
Bpu14I	TTCGAA	1 cut(s)	185
BpuEI	CTTGAG	1 cut(s)	1227
BpuMI	CCSGG	2 cut(s)	98, 172
Bsa29I	ATCGAT	1 cut(s)	609
BsaBI	GATNNNNATC	1 cut(s)	1557
BsaHI	GRCGYC	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	800
BsaWI	WCCGGW	1 cut(s)	724
BsaXI	ACNNNNNCTCC	2 cut(s)	166, 196
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 103, 276, 1262, 1273
Bse118I	RCCGGY	3 cut(s)	40, 272, 280
Bse1I	ACTGG	3 cut(s)	537, 740, 1088
Bse3DI	GCAATG	1 cut(s)	1506
Bse8I	GATNNNNATC	1 cut(s)	1557
BseBI	CCWGG	2 cut(s)	286, 647
BseCI	ATCGAT	1 cut(s)	609
BseJI	GATNNNNATC	1 cut(s)	1557
BseLI	CCNNNNNNNGG	5 cut(s)	58, 103, 276, 1262, 1273
BseMI	GCAATG	1 cut(s)	1506
BseMII	CTCAG	4 cut(s)	201, 304, 897, 1619
BseNI	ACTGG	3 cut(s)	537, 740, 1088
BseRI	GAGGAG	2 cut(s)	880, 1010
BseSI	GKGCMC	2 cut(s)	522, 1585
BseXI	GCAGC	3 cut(s)	394, 814, 1597
BseYI	CCCAGC	1 cut(s)	321
Bsh1236I	CGCG	4 cut(s)	336, 415, 432, 1747
BshFI	GGCC	3 cut(s)	280, 284, 1266
BshNI	GGYRCC	1 cut(s)	1084
BshVI	ATCGAT	1 cut(s)	609
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	6 cut(s)	41, 97, 171, 273, 281, 725
BslFI	GGGAC	4 cut(s)	83, 311, 862, 895
BslI	CCNNNNNNNGG	5 cut(s)	58, 103, 276, 1262, 1273
BsmAI	GTCTC	2 cut(s)	800, 1242
BsmFI	GGGAC	4 cut(s)	83, 311, 862, 895
BsmI	GAATGC	1 cut(s)	1240
BsnI	GGCC	3 cut(s)	280, 284, 1266
Bso31I	GGTCTC	1 cut(s)	800
BsoBI	CYCGRG	1 cut(s)	55
Bsp119I	TTCGAA	1 cut(s)	185
Bsp1286I	GDGCHC	2 cut(s)	522, 1585
Bsp143I	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
Bsp1720I	GCTNAGC	1 cut(s)	290
Bsp68I	TCGCGA	1 cut(s)	432
BspACI	CCGC	6 cut(s)	110, 270, 303, 415, 962, 1747
BspANI	GGCC	3 cut(s)	280, 284, 1266
BspCNI	CTCAG	4 cut(s)	202, 303, 898, 1620
BspDI	ATCGAT	1 cut(s)	609
BspFNI	CGCG	4 cut(s)	336, 415, 432, 1747
BspLI	GGNNCC	6 cut(s)	95, 326, 327, 718, 1086, 1675
BspMAI	CTGCAG	1 cut(s)	804
BspMI	ACCTGC	1 cut(s)	253
BspOI	GCTAGC	1 cut(s)	1499
BspPI	GGATC	3 cut(s)	451, 592, 932
BspT104I	TTCGAA	1 cut(s)	185
BspT107I	GGYRCC	1 cut(s)	1084
BspTNI	GGTCTC	1 cut(s)	800
BsrDI	GCAATG	1 cut(s)	1506
BsrFI	RCCGGY	3 cut(s)	40, 272, 280
BsrI	ACTGG	3 cut(s)	537, 740, 1088
BssAI	RCCGGY	3 cut(s)	40, 272, 280
BssMI	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
BssNI	GRCGYC	1 cut(s)	38
Bst2UI	CCWGG	2 cut(s)	286, 647
Bst4CI	ACNGT	2 cut(s)	28, 1378
Bst6I	CTCTTC	3 cut(s)	191, 858, 1209
BstACI	GRCGYC	1 cut(s)	38
BstBI	TTCGAA	1 cut(s)	185
BstC8I	GCNNGC	6 cut(s)	42, 282, 825, 950, 1497, 1520
BstDEI	CTNAG	6 cut(s)	210, 290, 906, 1422, 1628, 1711
BstFNI	CGCG	4 cut(s)	336, 415, 432, 1747
BstH2I	RGCGCY	2 cut(s)	297, 1729
BstHHI	GCGC	3 cut(s)	296, 338, 1728
BstKTI	GATC	7 cut(s)	446, 587, 613, 940, 1337, 1349, 1627
BstMAI	GTCTC	2 cut(s)	800, 1242
BstMBI	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 286, 302, 308, 599, 893, 1208, 1217, 1501
BstNI	CCWGG	2 cut(s)	286, 647
BstNSI	RCATGY	1 cut(s)	1229
BstSCI	CCNGG	4 cut(s)	96, 170, 284, 645
BstSFI	CTRYAG	3 cut(s)	800, 861, 1762
BstSLI	GKGCMC	2 cut(s)	522, 1585
BstUI	CGCG	4 cut(s)	336, 415, 432, 1747
BstV1I	GCAGC	3 cut(s)	394, 814, 1597
BstV2I	GAAGAC	1 cut(s)	1659
BstX2I	RGATCY	1 cut(s)	1334
BstYI	RGATCY	1 cut(s)	1334
Bsu15I	ATCGAT	1 cut(s)	609
BsuRI	GGCC	3 cut(s)	280, 284, 1266
BsuTUI	ATCGAT	1 cut(s)	609
BtgZI	GCGATG	1 cut(s)	413
BtsI	GCAGTG	1 cut(s)	1401
BtsIMutI	CAGTG	2 cut(s)	33, 1401
BtuMI	TCGCGA	1 cut(s)	432
BveI	ACCTGC	1 cut(s)	253
Cac8I	GCNNGC	6 cut(s)	42, 282, 825, 950, 1497, 1520
CfoI	GCGC	3 cut(s)	296, 338, 1728
Cfr10I	RCCGGY	3 cut(s)	40, 272, 280
Cfr13I	GGNCC	3 cut(s)	325, 1265, 1673
ClaI	ATCGAT	1 cut(s)	609
CseI	GACGC	3 cut(s)	46, 989, 1435
Csp6I	GTAC	2 cut(s)	795, 1455
CspCI	CAANNNNNGTGG	2 cut(s)	694, 729
CviAII	CATG	9 cut(s)	376, 1067, 1226, 1299, 1340, 1430, 1472, 1721, 1755
CviQI	GTAC	2 cut(s)	795, 1455
DdeI	CTNAG	6 cut(s)	210, 290, 906, 1422, 1628, 1711
DpnI	GATC	7 cut(s)	445, 586, 612, 939, 1336, 1348, 1626
DpnII	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
DraI	TTTAAA	2 cut(s)	772, 814
DraIII	CACNNNGTG	1 cut(s)	555
EaeI	YGGCCR	1 cut(s)	278
Eam1104I	CTCTTC	3 cut(s)	191, 858, 1209
EarI	CTCTTC	3 cut(s)	191, 858, 1209
Eco31I	GGTCTC	1 cut(s)	800
Eco47I	GGWCC	2 cut(s)	325, 1673
Eco88I	CYCGRG	1 cut(s)	55
EcoO109I	RGGNCCY	2 cut(s)	325, 1673
EcoRI	GAATTC	2 cut(s)	1026, 1706
EcoRII	CCWGG	2 cut(s)	284, 645
EcoT22I	ATGCAT	2 cut(s)	429, 1240
FaeI	CATG	9 cut(s)	379, 1070, 1229, 1302, 1343, 1433, 1475, 1724, 1758
FaqI	GGGAC	4 cut(s)	83, 311, 862, 895
FatI	CATG	9 cut(s)	375, 1066, 1225, 1298, 1339, 1429, 1471, 1720, 1754
FauI	CCCGC	2 cut(s)	408, 969
Fnu4HI	GCNGC	6 cut(s)	7, 270, 303, 383, 828, 1611
FseI	GGCCGGCC	1 cut(s)	284
Fsp4HI	GCNGC	6 cut(s)	7, 270, 303, 383, 828, 1611
FspBI	CTAG	5 cut(s)	845, 966, 1329, 1464, 1496
GlaI	GCGC	3 cut(s)	295, 337, 1727
GluI	GCNGC	6 cut(s)	7, 270, 303, 383, 828, 1611
GsaI	CCCAGC	1 cut(s)	325
GsuI	CTGGAG	1 cut(s)	637
HaeII	RGCGCY	2 cut(s)	297, 1729
HaeIII	GGCC	3 cut(s)	280, 284, 1266
HapII	CCGG	6 cut(s)	41, 97, 171, 273, 281, 725
HgaI	GACGC	3 cut(s)	46, 989, 1435
HhaI	GCGC	3 cut(s)	296, 338, 1728
Hin1I	GRCGYC	1 cut(s)	38
Hin1II	CATG	9 cut(s)	379, 1070, 1229, 1302, 1343, 1433, 1475, 1724, 1758
Hin6I	GCGC	3 cut(s)	294, 336, 1726
HinP1I	GCGC	3 cut(s)	294, 336, 1726
HincII	GTYRAC	1 cut(s)	1053
HindII	GTYRAC	1 cut(s)	1053
HindIII	AAGCTT	2 cut(s)	946, 1520
HpaII	CCGG	6 cut(s)	41, 97, 171, 273, 281, 725
HphI	GGTGA	5 cut(s)	46, 127, 152, 176, 469
Hpy166II	GTNNAC	2 cut(s)	460, 1053
Hpy188I	TCNGA	7 cut(s)	93, 211, 907, 1552, 1593, 1629, 1736
Hpy188III	TCNNGA	9 cut(s)	393, 431, 569, 616, 992, 1329, 1464, 1532, 1671
Hpy8I	GTNNAC	2 cut(s)	460, 1053
Hpy99I	CGWCG	2 cut(s)	302, 1317
HpyAV	CCTTC	5 cut(s)	127, 461, 1267, 1395, 1731
HpyCH4III	ACNGT	2 cut(s)	28, 1378
HpyCH4IV	ACGT	1 cut(s)	1528
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 286, 302, 308, 599, 893, 1208, 1217, 1501
HpyF3I	CTNAG	6 cut(s)	210, 290, 906, 1422, 1628, 1711
HpySE526I	ACGT	1 cut(s)	1528
Hsp92I	GRCGYC	1 cut(s)	38
Hsp92II	CATG	9 cut(s)	379, 1070, 1229, 1302, 1343, 1433, 1475, 1724, 1758
HspAI	GCGC	3 cut(s)	294, 336, 1726
KflI	GGGWCCC	1 cut(s)	325
KroI	GCCGGC	2 cut(s)	40, 280
KroNI	GCCGGC	2 cut(s)	42, 282
Kzo9I	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
LmnI	GCTCC	5 cut(s)	93, 153, 259, 599, 722
Lsp1109I	GCAGC	3 cut(s)	394, 814, 1597
LweI	GCATC	6 cut(s)	331, 436, 911, 1247, 1312, 1534
MaeI	CTAG	5 cut(s)	845, 966, 1329, 1464, 1496
MaeII	ACGT	1 cut(s)	1528
MaeIII	GTNAC	4 cut(s)	34, 371, 407, 547
MalI	GATC	7 cut(s)	445, 586, 612, 939, 1336, 1348, 1626
MboI	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
MfeI	CAATTG	1 cut(s)	1389
MflI	RGATCY	1 cut(s)	1334
MhlI	GDGCHC	2 cut(s)	522, 1585
MlyI	GAGTC	5 cut(s)	176, 221, 844, 1412, 1454
MmeI	TCCRAC	1 cut(s)	71
Mph1103I	ATGCAT	2 cut(s)	429, 1240
MreI	CGCCGGCG	1 cut(s)	40
MroNI	GCCGGC	2 cut(s)	40, 280
MroXI	GAANNNNTTC	2 cut(s)	312, 1412
MseI	TTAA	7 cut(s)	366, 771, 813, 837, 1131, 1371, 1491
MslI	CAYNNNNRTG	2 cut(s)	876, 1434
MspA1I	CMGCKG	2 cut(s)	385, 827
MspI	CCGG	6 cut(s)	41, 97, 171, 273, 281, 725
MspR9I	CCNGG	4 cut(s)	98, 172, 286, 647
MunI	CAATTG	1 cut(s)	1389
Mva1269I	GAATGC	1 cut(s)	1240
MvaI	CCWGG	2 cut(s)	286, 647
MvnI	CGCG	4 cut(s)	336, 415, 432, 1747
MwoI	GCNNNNNNNGC	9 cut(s)	12, 286, 302, 308, 599, 893, 1208, 1217, 1501
NaeI	GCCGGC	2 cut(s)	42, 282
NciI	CCSGG	2 cut(s)	98, 172
NdeII	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
NgoMIV	GCCGGC	2 cut(s)	40, 280
NheI	GCTAGC	1 cut(s)	1495
NlaIII	CATG	9 cut(s)	379, 1070, 1229, 1302, 1343, 1433, 1475, 1724, 1758
NlaIV	GGNNCC	6 cut(s)	95, 326, 327, 718, 1086, 1675
NmuCI	GTSAC	3 cut(s)	34, 407, 547
NruI	TCGCGA	1 cut(s)	432
NsiI	ATGCAT	2 cut(s)	429, 1240
NspI	RCATGY	1 cut(s)	1229
NspV	TTCGAA	1 cut(s)	185
OliI	CACNNNNGTG	1 cut(s)	876
PciI	ACATGT	1 cut(s)	1225
PctI	GAATGC	1 cut(s)	1240
PdiI	GCCGGC	2 cut(s)	42, 282
PdmI	GAANNNNTTC	2 cut(s)	312, 1412
PfeI	GAWTC	5 cut(s)	512, 1118, 1475, 1507, 1535
PflFI	GACNNNGTC	2 cut(s)	28, 74
PfoI	TCCNGGA	1 cut(s)	170
PkrI	GCNGC	6 cut(s)	8, 271, 304, 384, 829, 1612
PleI	GAGTC	5 cut(s)	175, 220, 844, 1412, 1454
PpsI	GAGTC	5 cut(s)	175, 220, 844, 1412, 1454
PpuMI	RGGWCCY	2 cut(s)	325, 1673
PscI	ACATGT	1 cut(s)	1225
PshBI	ATTAAT	1 cut(s)	1131
Psp5II	RGGWCCY	2 cut(s)	325, 1673
Psp6I	CCWGG	2 cut(s)	284, 645
PspFI	CCCAGC	1 cut(s)	321
PspGI	CCWGG	2 cut(s)	284, 645
PspN4I	GGNNCC	6 cut(s)	95, 326, 327, 718, 1086, 1675
PspPI	GGNCC	3 cut(s)	325, 1265, 1673
PspPPI	RGGWCCY	2 cut(s)	325, 1673
PstI	CTGCAG	1 cut(s)	804
PsuI	RGATCY	1 cut(s)	1334
PsyI	GACNNNGTC	2 cut(s)	28, 74
PvuII	CAGCTG	2 cut(s)	385, 827
RigI	GGCCGGCC	1 cut(s)	284
RruI	TCGCGA	1 cut(s)	432
RsaI	GTAC	2 cut(s)	796, 1456
RsaNI	GTAC	2 cut(s)	795, 1455
RseI	CAYNNNNRTG	2 cut(s)	876, 1434
SaqAI	TTAA	7 cut(s)	366, 771, 813, 837, 1131, 1371, 1491
SatI	GCNGC	6 cut(s)	7, 270, 303, 383, 828, 1611
Sau3AI	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
Sau96I	GGNCC	3 cut(s)	325, 1265, 1673
ScaI	AGTACT	1 cut(s)	796
SchI	GAGTC	5 cut(s)	176, 221, 844, 1412, 1454
ScrFI	CCNGG	4 cut(s)	98, 172, 286, 647
SduI	GDGCHC	2 cut(s)	522, 1585
SfaNI	GCATC	6 cut(s)	331, 436, 911, 1247, 1312, 1534
SfcI	CTRYAG	3 cut(s)	800, 861, 1762
SfuI	TTCGAA	1 cut(s)	185
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	2 cut(s)	325, 1673
SmiMI	CAYNNNNRTG	2 cut(s)	876, 1434
SmlI	CTYRAG	1 cut(s)	1242
SmoI	CTYRAG	1 cut(s)	1242
SsiI	CCGC	6 cut(s)	110, 270, 303, 415, 962, 1747
SspMI	CTAG	5 cut(s)	845, 966, 1329, 1464, 1496
StyD4I	CCNGG	4 cut(s)	96, 170, 284, 645
TaaI	ACNGT	2 cut(s)	28, 1378
TaiI	ACGT	1 cut(s)	1531
TaqI	TCGA	8 cut(s)	17, 48, 185, 609, 1092, 1345, 1416, 1542
TatI	WGTACW	1 cut(s)	794
TauI	GCSGC	2 cut(s)	272, 305
TfiI	GAWTC	5 cut(s)	512, 1118, 1475, 1507, 1535
Tru1I	TTAA	7 cut(s)	366, 771, 813, 837, 1131, 1371, 1491
Tru9I	TTAA	7 cut(s)	366, 771, 813, 837, 1131, 1371, 1491
TscAI	CASTG	2 cut(s)	33, 1401
TseFI	GTSAC	3 cut(s)	34, 407, 547
TseI	GCWGC	4 cut(s)	6, 382, 827, 1610
Tsp45I	GTSAC	3 cut(s)	34, 407, 547
TspDTI	ATGAA	9 cut(s)	206, 392, 480, 935, 1110, 1446, 1467, 1662, 1719
TspRI	CASTG	2 cut(s)	33, 1401
Tth111I	GACNNNGTC	2 cut(s)	28, 74
VpaK11BI	GGWCC	2 cut(s)	325, 1673
VspI	ATTAAT	1 cut(s)	1131
XapI	RAATTY	4 cut(s)	471, 1026, 1664, 1706
XbaI	TCTAGA	2 cut(s)	1328, 1463
XceI	RCATGY	1 cut(s)	1229
XmnI	GAANNNNTTC	2 cut(s)	312, 1412
XspI	CTAG	5 cut(s)	845, 966, 1329, 1464, 1496
ZrmI	AGTACT	1 cut(s)	796
Zsp2I	ATGCAT	2 cut(s)	429, 1240

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.