Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005948

Physical Location & Seq

Genomic Coordinates Forward (+)

57689570 .. 57697153

Gene Structure 7584 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0445900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGCCTCGTAAAGTAAACTACGGGCTTGATTACGATGATGAAGACTACGATGCCTATGAAGATTATGATTATGACCATGACCACGATTTGGAAATAGAAAATAATGGCAAAGAACCTGAGTTAAAGCAGGAAACTGTAAGGCGTGATGTTTGGCGTTGTTCCATTTGTACATATGATAATGAAGAAGGTTTGACTGCGTGTGACATTTGTGGGGTTCTTCGTAAACCTTTGGGTAGAGTTGGAAGCAATATTGATAAGAAAACAGTTGAAGGCAGATGCAAAGATTCTGGAGCATCCGTAATGGCCAAGTGTCTTTTTGCATCGTTGCCGCGCAAGATAACCCAAAAGGCTGTATTATTTCATCAGCAGAAAGATGATTTTCTGATAGAAGAGGGAAATAAGTTCTACAAGCTTGGGGATATCCAAGGACCCATTCATGAATTCCAAAATGCTTTTATTATTCATAAGAATGATGATATTAATATAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTCCAATGGATTGCGATCCTCCAAAGTGGGTTCAAAAGCCAGTGTTAGTGACGTAGAGTCTTCGGGAGTTTCCTCGAAAGCTGCTAAGAAGAATAGTGCAGTTAGGGCACAATCAAGTGCTGAATGGTCAGATAGCTCATCTACTGCAGCACAAAAAGACCAACAAGCTAGATTAGATAAGGGAACTTCATCAGGGAATAGGGCATTTAGCCATCCCCATGGAAGTAGTGGCACCACAACTATACAGTCAAATGGTAGTTTGTCAGACAGTTCATCCTTGCAGCCAACAAGCTCTCATATGGAAGAGGGCATTAGTTCTTTAGTGATTGGAGGCAAGCCTGAGAGTCTTACTACTAGCTCTAAGAACATGTCTTCCGATGCTAGATCTGGGCATTCGAAAATTGTTAGTTCTAGCGGATCGCATTCACGAGCAGACTATAAACCTGAAAAATGGATGCTTCCTGACAAAGCTGTTGATACATTGACTCAACTGAATCTTGCAATTGTTGGACATGTTGATTCAGGAAAATCAACACTCTCAGGTAGACTGCTTCACCTTTTGGGACGGGTATCTAAAAAAGACATGCACAAATATGAGAAAGAGGCAAAGTCACAGGGCAAGGGGTCATTTGCATATGCTTGGGCATTGGATGAGAGTGCAGAAGAAAGGGAAAGAGGAATAACTATGAATGTGGCTGTTGCATATTTTGATTCCAGAAAGTATCATGTTGTTGTGCTCGATTCTCCTGGCCATAAAGACTTTGTTCCAAACATGATATCTGGGGCAACACAAGCTGATGCTGCAATACTTCTTGTAGATGCTTCGTGTGGTGCATTCGAAGCTGGTATAAAGGGACAGACTATGGAACACGCACAACTTATCAGAAGCTTTGGTGTTGATCAAATTATAGTTGCGGTTAACAAGATGGATGTTGTTGAATACTCCAAGGATCGATTTGATGAAATCAAACAGACACTTGGAACATTTCTCCATTCCCGTGGCTTCAAAGATTCTTCAGTGTATTGGGTTCCATTGAGTGTCATGGAAAATCAAAATTTGGTATCAGCTCCTTCTGAGGCTCGTTTGTTGTCTTGGTATCGTGGACCTTCCCTGTTGGATTCAATTGATTCCCTTCAACCTCCCACGAGAGATTTTCAAAGGCCACTGCTCATGCCAATATGTGATGTCATTAGATCTACTTCTCTGGGACAGGTGTCTGCTTGTGGTAAATTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTTCTGGTTATGCCTTCAGGAGAATTAGGGACTGTCCGCTCTTTAGAACGGGATTCTCAGGCATGTTCCATTGCAAGAGCTGGTGACAATGTGGGTGTTACTCTTCAAGGCATTGATGGAGGTCATGTGATGGCAGGGGGCGTGCTCTGTCACCCTGGTTTTCCGGTTGCAGTTGCAAAACATTTGGAATTGAAAGTGCTTCTTTTGGATGTCGCCACCCCTATTTTAATTGGCTCTCAGGTGGAATTTCACATACACCACGCCAAGGAGGCTGCAAGAGTTGTAAAAATATTGTCATTAATTGATCCAAAGGGAAAAGTGACGAAAAAGTCTCCTCGCTGTCTACTTGCAAAGCAGAGGGCTGTTATAGAGGTAGTTTTGCAAGGACCAGTTTGTGTGGAAGAGTATACAAGTTCTAAAGCTCTAGGGAGCGTATCTCTGAGGGCATCAGGAAACACTGTGGCCCTCGGTGTTGTAAGCCGGATTATAAAGGAGCAGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009966 GO:0009987 GO:0010646 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0097472 GO:0098542 GO:0140096 GO:1900424 GO:1900426 GO:1901564 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

764

Amino Acids

82.82

Weight (kDa)

6.56

Isoelectric Point (pI)

46.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	340 - 554	3.9e-48	Elongation factor Tu GTP binding domain
GTP_EFTU_D2	PF03144	584 - 647	4.5e-09	Elongation factor Tu domain 2
GTP_EFTU_D3	PF03143	655 - 759	2e-10	Elongation factor Tu C-terminal domain
GTP-eEF1A_C	PF22594	659 - 756	4.5e-24	GTP-eEF1A C-terminal domain-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18670 AT1G18670 AT1G18670 AT1G74330 AT1G74330 AT1G74330
fragaria_vesca	FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470
malus_domestica	MD06G1198100.v1.1 MD14G1205700.v1.1
prunus_persica	Prupe.5G199000_v2.0.a1 Prupe.5G199000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0182181
rosa_laevigata	RLG00000005143
rosa_multiflora	Rmu_sc0000003.1_g000017
rosa_roxburghii	Rroxscaffold_3G00271440
rosa_rugosa	Rorug06G0445900 Rorug06G0445900
rosa_samantha	Rh7AG049000 Rh7BG048900 Rh7CG050300 Rh7DG048200
rosa_wichuraiana	Rw7G004000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2279
AasI	GACNNNNNNGTC	1 cut(s)	2119
AccB1I	GGYRCC	1 cut(s)	758
AccB7I	CCANNNNNTGG	1 cut(s)	88
AccBSI	CCGCTC	1 cut(s)	1830
AccI	GTMKAC	3 cut(s)	1072, 2134, 2198
AccII	CGCG	1 cut(s)	331
AciI	CCGC	4 cut(s)	329, 942, 1442, 1828
AclWI	GGATC	5 cut(s)	537, 952, 1485, 1792, 2090
AcoI	YGGCCR	2 cut(s)	303, 1276
AcsI	RAATTY	3 cut(s)	440, 1582, 2036
AcuI	CTGAAG	2 cut(s)	1527, 1791
AfaI	GTAC	1 cut(s)	169
AfiI	CCNNNNNNNGG	2 cut(s)	88, 2056
AflIII	ACRYGT	2 cut(s)	894, 1039
AhdI	GACNNNNNGTC	1 cut(s)	583
AjnI	CCWGG	2 cut(s)	1273, 1945
AjuI	GAANNNNNNNTTGG	2 cut(s)	417, 449
AloI	GAACNNNNNNTCC	4 cut(s)	884, 916, 1776, 1808
Alw21I	GWGCWC	3 cut(s)	1266, 1774, 1938
Alw26I	GTCTC	1 cut(s)	2127
AlwI	GGATC	5 cut(s)	537, 952, 1485, 1792, 2090
AoxI	GGCC	4 cut(s)	303, 1276, 1688, 2253
ApeKI	GCWGC	5 cut(s)	608, 674, 808, 1328, 2063
ApoI	RAATTY	3 cut(s)	440, 1582, 2036
AseI	ATTAAT	2 cut(s)	480, 2090
AspLEI	GCGC	1 cut(s)	333
AspS9I	GGNCC	4 cut(s)	428, 1631, 2177, 2254
AsuHPI	GGTGA	3 cut(s)	1073, 1886, 1934
AsuII	TTCGAA	2 cut(s)	923, 1365
AvaII	GGWCC	3 cut(s)	428, 1631, 2177
BaeGI	GKGCMC	1 cut(s)	637
BalI	TGGCCA	2 cut(s)	305, 1278
BanI	GGYRCC	1 cut(s)	758
BanII	GRGCYC	1 cut(s)	1774
BauI	CACGAG	2 cut(s)	954, 1672
BbsI	GAAGAC	3 cut(s)	48, 579, 891
Bbv12I	GWGCWC	3 cut(s)	1266, 1774, 1938
BbvI	GCAGC	5 cut(s)	595, 686, 820, 1315, 2050
BccI	CCATC	5 cut(s)	517, 747, 1447, 1901, 1915
BciT130I	CCWGG	2 cut(s)	1275, 1947
BclI	TGATCA	1 cut(s)	1426
BcoDI	GTCTC	1 cut(s)	2127
BfaI	CTAG	5 cut(s)	696, 882, 909, 939, 2216
BfmI	CTRYAG	1 cut(s)	672
BglI	GCCNNNNNGGC	1 cut(s)	2060
BglII	AGATCT	2 cut(s)	911, 1721
BisI	GCNGC	6 cut(s)	329, 609, 675, 809, 1329, 2064
BlsI	GCNGC	6 cut(s)	330, 610, 676, 810, 1330, 2065
Bme1390I	CCNGG	2 cut(s)	1275, 1947
Bme18I	GGWCC	3 cut(s)	428, 1631, 2177
BmeRI	GACNNNNNGTC	1 cut(s)	583
BmgT120I	GGNCC	4 cut(s)	428, 1631, 2177, 2254
BmiI	GGNNCC	3 cut(s)	430, 760, 1557
BmrFI	CCNGG	2 cut(s)	1275, 1947
BmsI	GCATC	9 cut(s)	40, 266, 302, 329, 895, 972, 1315, 1336, 2246
BoxI	GACNNNNGTC	1 cut(s)	1741
BpiI	GAAGAC	3 cut(s)	48, 579, 891
BplI	GAGNNNNNCTC	2 cut(s)	2212, 2244
BpmI	CTGGAG	1 cut(s)	309
Bpu14I	TTCGAA	2 cut(s)	923, 1365
Bsa29I	ATCGAT	1 cut(s)	1480
BsaBI	GATNNNNATC	1 cut(s)	541
BsaJI	CCNNGG	7 cut(s)	424, 745, 1473, 1525, 1945, 2055, 2257
BsaWI	WCCGGW	1 cut(s)	1954
BsaXI	ACNNNNNCTCC	5 cut(s)	282, 312, 1902, 1932, 2276
Bsc4I	CCNNNNNNNGG	2 cut(s)	88, 2056
Bse1I	ACTGG	2 cut(s)	567, 2180
Bse3DI	GCAATG	1 cut(s)	1860
Bse8I	GATNNNNATC	1 cut(s)	541
BseBI	CCWGG	2 cut(s)	1275, 1947
BseCI	ATCGAT	1 cut(s)	1480
BseDI	CCNNGG	7 cut(s)	424, 745, 1473, 1525, 1945, 2055, 2257
BseGI	GGATG	8 cut(s)	293, 509, 739, 800, 987, 1183, 1462, 2005
BseJI	GATNNNNATC	1 cut(s)	541
BseLI	CCNNNNNNNGG	2 cut(s)	88, 2056
BseMI	GCAATG	1 cut(s)	1860
BseMII	CTCAG	7 cut(s)	108, 858, 1080, 1593, 1862, 2042, 2222
BseNI	ACTGG	2 cut(s)	567, 2180
BseRI	GAGGAG	1 cut(s)	2115
BseSI	GKGCMC	1 cut(s)	637
BseXI	GCAGC	5 cut(s)	595, 686, 820, 1315, 2050
BsgI	GTGCAG	2 cut(s)	645, 1206
Bsh1236I	CGCG	1 cut(s)	331
BshFI	GGCC	4 cut(s)	305, 1278, 1690, 2255
BshNI	GGYRCC	1 cut(s)	758
BshVI	ATCGAT	1 cut(s)	1480
BsiHKAI	GWGCWC	3 cut(s)	1266, 1774, 1938
BsiSI	CCGG	2 cut(s)	1955, 2272
BslFI	GGGAC	4 cut(s)	1104, 1395, 1749, 1834
BslI	CCNNNNNNNGG	2 cut(s)	88, 2056
BsmAI	GTCTC	1 cut(s)	2127
BsmFI	GGGAC	4 cut(s)	1104, 1395, 1749, 1834
BsmI	GAATGC	3 cut(s)	919, 949, 1361
BsnI	GGCC	4 cut(s)	305, 1278, 1690, 2255
Bsp119I	TTCGAA	2 cut(s)	923, 1365
Bsp1286I	GDGCHC	4 cut(s)	637, 1266, 1774, 1938
Bsp1407I	TGTACA	1 cut(s)	167
Bsp143I	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
Bsp19I	CCATGG	1 cut(s)	745
BspACI	CCGC	4 cut(s)	329, 942, 1442, 1828
BspANI	GGCC	4 cut(s)	305, 1278, 1690, 2255
BspCNI	CTCAG	7 cut(s)	109, 859, 1079, 1594, 1861, 2041, 2223
BspDI	ATCGAT	1 cut(s)	1480
BspFNI	CGCG	1 cut(s)	331
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	3 cut(s)	430, 760, 1557
BspMAI	CTGCAG	1 cut(s)	676
BspPI	GGATC	5 cut(s)	537, 952, 1485, 1792, 2090
BspQI	GCTCTTC	1 cut(s)	1779
BspT104I	TTCGAA	2 cut(s)	923, 1365
BspT107I	GGYRCC	1 cut(s)	758
BsrBI	CCGCTC	1 cut(s)	1830
BsrDI	GCAATG	1 cut(s)	1860
BsrGI	TGTACA	1 cut(s)	167
BsrI	ACTGG	2 cut(s)	567, 2180
BssECI	CCNNGG	7 cut(s)	424, 745, 1473, 1525, 1945, 2055, 2257
BssMI	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
BssNAI	GTATAC	1 cut(s)	2199
BssSI	CACGAG	2 cut(s)	954, 1672
BssT1I	CCWWGG	4 cut(s)	424, 745, 1473, 2055
Bst1107I	GTATAC	1 cut(s)	2199
Bst2BI	CACGAG	2 cut(s)	954, 1672
Bst2UI	CCWGG	2 cut(s)	1275, 1947
Bst4CI	ACNGT	6 cut(s)	136, 265, 774, 797, 1825, 2251
Bst6I	CTCTTC	5 cut(s)	384, 825, 1779, 1899, 2187
BstAUI	TGTACA	1 cut(s)	167
BstBI	TTCGAA	2 cut(s)	923, 1365
BstC8I	GCNNGC	2 cut(s)	863, 1934
BstDEI	CTNAG	9 cut(s)	117, 612, 867, 888, 1066, 1602, 1848, 2028, 2231
BstDSI	CCRYGG	2 cut(s)	745, 1525
BstF5I	GGATG	8 cut(s)	293, 509, 739, 800, 987, 1183, 1462, 2005
BstFNI	CGCG	1 cut(s)	331
BstHHI	GCGC	1 cut(s)	333
BstKTI	GATC	8 cut(s)	545, 914, 947, 1429, 1480, 1724, 1787, 2098
BstMAI	GTCTC	1 cut(s)	2127
BstMBI	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
BstMWI	GCNNNNNNNGC	5 cut(s)	632, 1319, 1328, 1367, 2060
BstNI	CCWGG	2 cut(s)	1275, 1947
BstNSI	RCATGY	4 cut(s)	898, 1043, 1114, 1857
BstPAI	GACNNNNGTC	1 cut(s)	1741
BstSCI	CCNGG	2 cut(s)	1273, 1945
BstSFI	CTRYAG	1 cut(s)	672
BstSLI	GKGCMC	1 cut(s)	637
BstUI	CGCG	1 cut(s)	331
BstV1I	GCAGC	5 cut(s)	595, 686, 820, 1315, 2050
BstV2I	GAAGAC	3 cut(s)	48, 579, 891
BstX2I	RGATCY	2 cut(s)	911, 1721
BstXI	CCANNNNNNTGG	2 cut(s)	746, 1526
BstYI	RGATCY	2 cut(s)	911, 1721
BstZ17I	GTATAC	1 cut(s)	2199
Bsu15I	ATCGAT	1 cut(s)	1480
BsuRI	GGCC	4 cut(s)	305, 1278, 1690, 2255
BsuTUI	ATCGAT	1 cut(s)	1480
BtgI	CCRYGG	2 cut(s)	745, 1525
BtsCI	GGATG	8 cut(s)	293, 509, 739, 800, 987, 1183, 1462, 2005
BtsI	GCAGTG	1 cut(s)	1691
BtsIMutI	CAGTG	4 cut(s)	574, 1551, 1691, 2247
Cac8I	GCNNGC	2 cut(s)	863, 1934
CciI	TCATGA	1 cut(s)	436
CfoI	GCGC	1 cut(s)	333
Cfr13I	GGNCC	4 cut(s)	428, 1631, 2177, 2254
ClaI	ATCGAT	1 cut(s)	1480
Csp6I	GTAC	1 cut(s)	168
CviQI	GTAC	1 cut(s)	168
DdeI	CTNAG	9 cut(s)	117, 612, 867, 888, 1066, 1602, 1848, 2028, 2231
DpnI	GATC	8 cut(s)	544, 913, 946, 1428, 1479, 1723, 1786, 2097
DpnII	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
DrdI	GACNNNNNNGTC	1 cut(s)	2119
DriI	GACNNNNNGTC	1 cut(s)	583
DseDI	GACNNNNNNGTC	1 cut(s)	2119
EaeI	YGGCCR	2 cut(s)	303, 1276
Eam1104I	CTCTTC	5 cut(s)	384, 825, 1779, 1899, 2187
Eam1105I	GACNNNNNGTC	1 cut(s)	583
EarI	CTCTTC	5 cut(s)	384, 825, 1779, 1899, 2187
Ecl136II	GAGCTC	1 cut(s)	1772
Eco130I	CCWWGG	4 cut(s)	424, 745, 1473, 2055
Eco24I	GRGCYC	1 cut(s)	1774
Eco32I	GATATC	2 cut(s)	421, 1305
Eco47I	GGWCC	3 cut(s)	428, 1631, 2177
Eco53kI	GAGCTC	1 cut(s)	1772
Eco57I	CTGAAG	2 cut(s)	1527, 1791
EcoICRI	GAGCTC	1 cut(s)	1772
EcoO109I	RGGNCCY	1 cut(s)	428
EcoRI	GAATTC	1 cut(s)	440
EcoRII	CCWGG	2 cut(s)	1273, 1945
EcoRV	GATATC	2 cut(s)	421, 1305
EcoT14I	CCWWGG	4 cut(s)	424, 745, 1473, 2055
EcoT38I	GRGCYC	1 cut(s)	1774
ErhI	CCWWGG	4 cut(s)	424, 745, 1473, 2055
FalI	AAGNNNNNCTT	2 cut(s)	1977, 2009
FaqI	GGGAC	4 cut(s)	1104, 1395, 1749, 1834
FauNDI	CATATG	3 cut(s)	172, 825, 1162
FbaI	TGATCA	1 cut(s)	1426
FblI	GTMKAC	3 cut(s)	1072, 2134, 2198
Fnu4HI	GCNGC	6 cut(s)	329, 609, 675, 809, 1329, 2064
FokI	GGATG	8 cut(s)	280, 496, 726, 787, 994, 1190, 1469, 2012
FriOI	GRGCYC	1 cut(s)	1774
Fsp4HI	GCNGC	6 cut(s)	329, 609, 675, 809, 1329, 2064
FspBI	CTAG	5 cut(s)	696, 882, 909, 939, 2216
GlaI	GCGC	1 cut(s)	332
GluI	GCNGC	6 cut(s)	329, 609, 675, 809, 1329, 2064
GsuI	CTGGAG	1 cut(s)	309
HaeIII	GGCC	4 cut(s)	305, 1278, 1690, 2255
HapII	CCGG	2 cut(s)	1955, 2272
HhaI	GCGC	1 cut(s)	333
Hin6I	GCGC	1 cut(s)	331
HinP1I	GCGC	1 cut(s)	331
HincII	GTYRAC	1 cut(s)	1447
HindII	GTYRAC	1 cut(s)	1447
HindIII	AAGCTT	2 cut(s)	410, 1414
HpaI	GTTAAC	1 cut(s)	1447
HpaII	CCGG	2 cut(s)	1955, 2272
HphI	GGTGA	3 cut(s)	1073, 1886, 1934
Hpy166II	GTNNAC	7 cut(s)	16, 224, 1073, 1447, 1631, 2135, 2199
Hpy188I	TCNGA	8 cut(s)	384, 658, 793, 904, 1412, 1603, 1779, 2232
Hpy188III	TCNNGA	9 cut(s)	288, 437, 591, 954, 989, 1050, 1242, 1809, 2241
Hpy8I	GTNNAC	7 cut(s)	16, 224, 1073, 1447, 1631, 2135, 2199
HpyAV	CCTTC	6 cut(s)	179, 263, 1608, 1644, 1670, 1815
HpyCH4III	ACNGT	6 cut(s)	136, 265, 774, 797, 1825, 2251
HpyCH4IV	ACGT	1 cut(s)	579
HpyF10VI	GCNNNNNNNGC	5 cut(s)	632, 1319, 1328, 1367, 2060
HpyF3I	CTNAG	9 cut(s)	117, 612, 867, 888, 1066, 1602, 1848, 2028, 2231
HpySE526I	ACGT	1 cut(s)	579
HspAI	GCGC	1 cut(s)	331
Ksp22I	TGATCA	1 cut(s)	1426
KspAI	GTTAAC	1 cut(s)	1447
Kzo9I	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
LguI	GCTCTTC	1 cut(s)	1779
LmnI	GCTCC	6 cut(s)	290, 493, 1600, 1769, 2220, 2284
Lsp1109I	GCAGC	5 cut(s)	595, 686, 820, 1315, 2050
LweI	GCATC	9 cut(s)	40, 266, 302, 329, 895, 972, 1315, 1336, 2246
MaeI	CTAG	5 cut(s)	696, 882, 909, 939, 2216
MaeII	ACGT	1 cut(s)	579
MaeIII	GTNAC	7 cut(s)	200, 575, 1137, 1874, 1888, 1940, 2110
MalI	GATC	8 cut(s)	544, 913, 946, 1428, 1479, 1723, 1786, 2097
MbiI	CCGCTC	1 cut(s)	1830
MboI	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
MfeI	CAATTG	2 cut(s)	1029, 1650
MflI	RGATCY	2 cut(s)	911, 1721
MhlI	GDGCHC	4 cut(s)	637, 1266, 1774, 1938
MlsI	TGGCCA	2 cut(s)	305, 1278
MluNI	TGGCCA	2 cut(s)	305, 1278
MlyI	GAGTC	3 cut(s)	593, 880, 1006
MmeI	TCCRAC	3 cut(s)	220, 1015, 1623
Mox20I	TGGCCA	2 cut(s)	305, 1278
MscI	TGGCCA	2 cut(s)	305, 1278
MseI	TTAA	5 cut(s)	122, 480, 1446, 2018, 2090
MslI	CAYNNNNRTG	4 cut(s)	468, 744, 1119, 1524
Msp20I	TGGCCA	2 cut(s)	305, 1278
MspI	CCGG	2 cut(s)	1955, 2272
MspR9I	CCNGG	2 cut(s)	1275, 1947
MunI	CAATTG	2 cut(s)	1029, 1650
Mva1269I	GAATGC	3 cut(s)	919, 949, 1361
MvaI	CCWGG	2 cut(s)	1275, 1947
MvnI	CGCG	1 cut(s)	331
MwoI	GCNNNNNNNGC	5 cut(s)	632, 1319, 1328, 1367, 2060
NcoI	CCATGG	1 cut(s)	745
NdeI	CATATG	3 cut(s)	172, 825, 1162
NdeII	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
NlaIV	GGNNCC	3 cut(s)	430, 760, 1557
NmuCI	GTSAC	6 cut(s)	200, 575, 1137, 1874, 1940, 2110
NspI	RCATGY	4 cut(s)	898, 1043, 1114, 1857
NspV	TTCGAA	2 cut(s)	923, 1365
PagI	TCATGA	1 cut(s)	436
PciI	ACATGT	2 cut(s)	894, 1039
PciSI	GCTCTTC	1 cut(s)	1779
PctI	GAATGC	3 cut(s)	919, 949, 1361
PfeI	GAWTC	9 cut(s)	284, 1021, 1046, 1238, 1268, 1538, 1646, 1655, 1844
PflMI	CCANNNNNTGG	1 cut(s)	88
PkrI	GCNGC	6 cut(s)	330, 610, 676, 810, 1330, 2065
PleI	GAGTC	3 cut(s)	592, 879, 1006
PpsI	GAGTC	3 cut(s)	592, 879, 1006
PpuMI	RGGWCCY	1 cut(s)	428
PscI	ACATGT	2 cut(s)	894, 1039
PshAI	GACNNNNGTC	1 cut(s)	1741
PshBI	ATTAAT	2 cut(s)	480, 2090
PsiI	TTATAA	1 cut(s)	2279
Psp124BI	GAGCTC	1 cut(s)	1774
Psp5II	RGGWCCY	1 cut(s)	428
Psp6I	CCWGG	2 cut(s)	1273, 1945
PspGI	CCWGG	2 cut(s)	1273, 1945
PspN4I	GGNNCC	3 cut(s)	430, 760, 1557
PspPI	GGNCC	4 cut(s)	428, 1631, 2177, 2254
PspPPI	RGGWCCY	1 cut(s)	428
PstI	CTGCAG	1 cut(s)	676
PsuI	RGATCY	2 cut(s)	911, 1721
RsaI	GTAC	1 cut(s)	169
RsaNI	GTAC	1 cut(s)	168
RseI	CAYNNNNRTG	4 cut(s)	468, 744, 1119, 1524
SacI	GAGCTC	1 cut(s)	1774
SapI	GCTCTTC	1 cut(s)	1779
SaqAI	TTAA	5 cut(s)	122, 480, 1446, 2018, 2090
SatI	GCNGC	6 cut(s)	329, 609, 675, 809, 1329, 2064
Sau3AI	GATC	8 cut(s)	542, 911, 944, 1426, 1477, 1721, 1784, 2095
Sau96I	GGNCC	4 cut(s)	428, 1631, 2177, 2254
SchI	GAGTC	3 cut(s)	593, 880, 1006
ScrFI	CCNGG	2 cut(s)	1275, 1947
SduI	GDGCHC	4 cut(s)	637, 1266, 1774, 1938
SfaNI	GCATC	9 cut(s)	40, 266, 302, 329, 895, 972, 1315, 1336, 2246
SfcI	CTRYAG	1 cut(s)	672
SfuI	TTCGAA	2 cut(s)	923, 1365
SinI	GGWCC	3 cut(s)	428, 1631, 2177
SmiMI	CAYNNNNRTG	4 cut(s)	468, 744, 1119, 1524
SsiI	CCGC	4 cut(s)	329, 942, 1442, 1828
SspI	AATATT	2 cut(s)	250, 2082
SspMI	CTAG	5 cut(s)	696, 882, 909, 939, 2216
SstI	GAGCTC	1 cut(s)	1774
StyD4I	CCNGG	2 cut(s)	1273, 1945
StyI	CCWWGG	4 cut(s)	424, 745, 1473, 2055
TaaI	ACNGT	6 cut(s)	136, 265, 774, 797, 1825, 2251
TaiI	ACGT	1 cut(s)	582
TaqI	TCGA	5 cut(s)	602, 923, 1266, 1365, 1480
TatI	WGTACW	1 cut(s)	167
TauI	GCSGC	1 cut(s)	331
TfiI	GAWTC	9 cut(s)	284, 1021, 1046, 1238, 1268, 1538, 1646, 1655, 1844
Tru1I	TTAA	5 cut(s)	122, 480, 1446, 2018, 2090
Tru9I	TTAA	5 cut(s)	122, 480, 1446, 2018, 2090
TscAI	CASTG	4 cut(s)	574, 1551, 1698, 2254
TseFI	GTSAC	6 cut(s)	200, 575, 1137, 1874, 1940, 2110
TseI	GCWGC	5 cut(s)	608, 674, 808, 1328, 2063
Tsp45I	GTSAC	6 cut(s)	200, 575, 1137, 1874, 1940, 2110
TspGWI	ACGGA	1 cut(s)	286
TspRI	CASTG	4 cut(s)	574, 1551, 1698, 2254
Van91I	CCANNNNNTGG	1 cut(s)	88
VpaK11BI	GGWCC	3 cut(s)	428, 1631, 2177
VspI	ATTAAT	2 cut(s)	480, 2090
XapI	RAATTY	3 cut(s)	440, 1582, 2036
XceI	RCATGY	4 cut(s)	898, 1043, 1114, 1857
XcmI	CCANNNNNNNNNTGG	1 cut(s)	752
XmiI	GTMKAC	3 cut(s)	1072, 2134, 2198
XspI	CTAG	5 cut(s)	696, 882, 909, 939, 2216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.