Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0005948

Physical Location & Seq

Genomic Coordinates Reverse (-)

3393883 .. 3397689

Gene Structure 3807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG049000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGGCTGCGTCAGCTCGAAGCAGACGGTGTCGGTGACGCCGGCGTTCGACCACTCGGGGGCGTTCAGGGACAATGTCGGCAACTCGGGTCGGAGCCGGGTCGGGGAGGCGGTGGTGAAGAAGAAGAAGAAGGGGGGTGAGTTGAGTGGCAGCGAGTTGGGTGAGTCCGGGAGAGCGAGTTCGAATATGAAGAAGAGTAATGGTTCCGAGTCGTTGAGTTTTCGGTTGAGTAATTTGCAGAGGTATGTGGAGGGGGAGCAGGTCGCCGCCGGCTGGCCCGCCTGGCTCAGCGCCGTCGCCGCCGAAGCCATTCAGGGCTGGGTCCCACTTCGGGCCGATGCCTTTGAGAAATTAGAGAAGATTAAATGTTACATGAAGCAGCTGTTGTCTGGACTTGAACATTGTCACTCGCGGGGTGTAATGCATCGCGACATAAAAGGATCAAATCTTCTGGTGAACAATGAAGGAATTTTGAAGATGGCTGATTTTGGATTGGCAAACTTCTGTGATTCTGGGCACAAGCAACCCCTTACCAGTCGTGTTGTCACTTTGTGGTATCGTCCTCCTGAACTTTTGCTTGGATCAACTGCCTATGGAGCTTATATCGATCTCTGGAGTGTTGGCTGTGCATTTGCAGAACTCCTGGTTGGGAAACCTGTTCTTCAAGGGCGAACAGAGGTTGAACAATTACACAAGATTTTCAAGCTCTGCGGCTCCCCACCAGAGGAATACTGGAAAAAGTCCAAACTTCCACATGCAACTCTATTTAAACCCCAACAACCTTATGATAGTACTCTGCAGGAGACCTTTAAAGATTTGCCAGCTGCCACTTTTAACCTACTAGGGACTCTTCTTTCTGTAGAACCGCACAAGCGTGGGACTGCCTCCTCTGCTCTTGCATCTGAGTATTTCAAAATGAAGCCTTATGCCTGTGATCCATCAAGCTTGCCAATTTACCCACCTAGCAAAGAGATTGATGCGAAAAATCGGGAGGAGGCAAAGAGGAAGAAGATTGGTGGTAGAATTCGTGGAGGCGAAACAAGAAAGTCAACAAGAAAATCACATGGAATAAGTAAATTGGCACCAGTCGAGGACTTGGCAACCCAAGTGCAAGATTCATATAAAATTAATGGCACTAATGGACGTATTACGAAGCAAGAAAATGGTGTCATAGGCAGGGAGTTGCCGAAGCCATCAGCTTCTAAAGCAGAAGATGCTTCACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCATTAGAGGTTTCTACATCAAGTGGCTTCGCATGGGCAAAAAGACGACGAGATGATGCTTCTAGAAGATCTCATACTCGATCTATTTCAAAAGGACACATATTTAACACAGTAGAACCTTCAATTGCAGTGCATACAAGGAAGAACTTCGACTCTAAGACGCATGAAAATGGGGAATACAGAGGGCGTACTGACTCTAGAGGGCATGATTCATACGAGATTGTTAAGCTAGCAATGCTGAATCAATGGGGCAAGCTTGAACGTCCAGATTCTTTCGATGCTTCTGATGGGTATCACTCGCAGGAATTATCAAGGGCACTTTATCAGAGAGAGGAAAGGGTAGCTGCTACTAAAAGTGATCTGAGTTTTCCACTTGATGATGAAGAAGACAAGGTCGAATTTTCAGGACCCTTGTTATCTCAACCCTATAAAGTTGATGAATTCTTAGAAAGGCATGAGCGCCACATCAGAAGGGCAACGCGGAACTCATGGTTCTATAGAGGTAAGAAGCAAGGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009966 GO:0009987 GO:0010646 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0097472 GO:0098542 GO:0140096 GO:1900424 GO:1900426 GO:1901564 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

594

Amino Acids

66.1

Weight (kDa)

9.41

Isoelectric Point (pI)

45.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	118 - 304	2.8e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	119 - 233	4.6e-13	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18670 AT1G18670 AT1G18670 AT1G74330 AT1G74330 AT1G74330
fragaria_vesca	FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470
malus_domestica	MD06G1198100.v1.1 MD14G1205700.v1.1
prunus_persica	Prupe.5G199000_v2.0.a1 Prupe.5G199000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0182181
rosa_laevigata	RLG00000005143
rosa_multiflora	Rmu_sc0000003.1_g000017
rosa_roxburghii	Rroxscaffold_3G00271440
rosa_rugosa	Rorug06G0445900 Rorug06G0445900
rosa_samantha	Rh7AG049000 Rh7BG048900 Rh7CG050300 Rh7DG048200
rosa_wichuraiana	Rw7G004000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	250
AccB1I	GGYRCC	1 cut(s)	1081
AccII	CGCG	3 cut(s)	412, 429, 1744
AciI	CCGC	8 cut(s)	110, 267, 279, 300, 412, 711, 866, 1744
AclWI	GGATC	3 cut(s)	448, 589, 929
AcsI	RAATTY	4 cut(s)	468, 1023, 1661, 1703
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	552
AfaI	GTAC	2 cut(s)	793, 1453
AfiI	CCNNNNNNNGG	7 cut(s)	58, 103, 273, 331, 724, 1259, 1270
AflIII	ACRYGT	1 cut(s)	1222
AgsI	TTSAA	9 cut(s)	398, 475, 665, 683, 703, 913, 1353, 1386, 1523
AjnI	CCWGG	2 cut(s)	281, 642
AjuI	GAANNNNNNNTTGG	4 cut(s)	561, 593, 630, 662
AleI	CACNNNNGTG	1 cut(s)	873
AloI	GAACNNNNNNTCC	2 cut(s)	163, 195
Alw26I	GTCTC	2 cut(s)	797, 1239
AlwI	GGATC	3 cut(s)	448, 589, 929
Ama87I	CYCGRG	2 cut(s)	55, 85
AoxI	GGCC	3 cut(s)	275, 333, 1261
ApeKI	GCWGC	5 cut(s)	6, 150, 379, 824, 1607
ApoI	RAATTY	4 cut(s)	468, 1023, 1661, 1703
AseI	ATTAAT	1 cut(s)	1128
Asp700I	GAANNNNTTC	2 cut(s)	309, 1409
AspLEI	GCGC	2 cut(s)	293, 1725
AspS9I	GGNCC	5 cut(s)	276, 322, 333, 1262, 1670
AsuC2I	CCSGG	2 cut(s)	98, 169
AsuHPI	GGTGA	5 cut(s)	46, 127, 149, 173, 466
AsuII	TTCGAA	1 cut(s)	182
AsuNHI	GCTAGC	1 cut(s)	1492
AvaI	CYCGRG	2 cut(s)	55, 85
AvaII	GGWCC	2 cut(s)	322, 1670
BaeGI	GKGCMC	2 cut(s)	519, 1582
BanI	GGYRCC	1 cut(s)	1081
BarI	GAAGNNNNNNTAC	2 cut(s)	1321, 1353
BbsI	GAAGAC	1 cut(s)	1656
BbvI	GCAGC	4 cut(s)	162, 391, 811, 1594
BccI	CCATC	4 cut(s)	472, 946, 1201, 1544
BceAI	ACGGC	1 cut(s)	278
BciT130I	CCWGG	2 cut(s)	283, 644
BcnI	CCSGG	2 cut(s)	98, 169
BcoDI	GTCTC	2 cut(s)	797, 1239
BfaI	CTAG	5 cut(s)	842, 963, 1326, 1461, 1493
BfmI	CTRYAG	3 cut(s)	797, 858, 1759
BfoI	RGCGCY	2 cut(s)	294, 1726
BfuAI	ACCTGC	1 cut(s)	250
BglI	GCCNNNNNGGC	1 cut(s)	283
BglII	AGATCT	1 cut(s)	1331
BisI	GCNGC	8 cut(s)	7, 151, 267, 300, 380, 712, 825, 1608
BlpI	GCTNAGC	1 cut(s)	287
BlsI	GCNGC	8 cut(s)	8, 152, 268, 301, 381, 713, 826, 1609
BmcAI	AGTACT	1 cut(s)	793
Bme1390I	CCNGG	4 cut(s)	98, 169, 283, 644
Bme18I	GGWCC	2 cut(s)	322, 1670
BmeT110I	CYCGRG	2 cut(s)	55, 85
BmgT120I	GGNCC	5 cut(s)	276, 322, 333, 1262, 1670
BmiI	GGNNCC	7 cut(s)	95, 205, 323, 324, 715, 1083, 1672
BmrFI	CCNGG	4 cut(s)	98, 169, 283, 644
BmsI	GCATC	8 cut(s)	328, 433, 908, 967, 1204, 1244, 1309, 1531
BmtI	GCTAGC	1 cut(s)	1496
BpiI	GAAGAC	1 cut(s)	1656
BpmI	CTGGAG	1 cut(s)	634
Bpu1102I	GCTNAGC	1 cut(s)	287
Bpu14I	TTCGAA	1 cut(s)	182
BpuEI	CTTGAG	1 cut(s)	1224
BpuMI	CCSGG	2 cut(s)	98, 169
Bsa29I	ATCGAT	1 cut(s)	606
BsaBI	GATNNNNATC	1 cut(s)	1554
BsaHI	GRCGYC	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	797
BsaXI	ACNNNNNCTCC	2 cut(s)	163, 193
Bsc4I	CCNNNNNNNGG	7 cut(s)	58, 103, 273, 331, 724, 1259, 1270
Bse118I	RCCGGY	2 cut(s)	40, 269
Bse1I	ACTGG	3 cut(s)	534, 737, 1085
Bse3DI	GCAATG	1 cut(s)	1503
Bse8I	GATNNNNATC	1 cut(s)	1554
BseBI	CCWGG	2 cut(s)	283, 644
BseCI	ATCGAT	1 cut(s)	606
BseJI	GATNNNNATC	1 cut(s)	1554
BseLI	CCNNNNNNNGG	7 cut(s)	58, 103, 273, 331, 724, 1259, 1270
BseMI	GCAATG	1 cut(s)	1503
BseMII	CTCAG	3 cut(s)	301, 894, 1616
BseNI	ACTGG	3 cut(s)	534, 737, 1085
BseRI	GAGGAG	2 cut(s)	877, 1007
BseSI	GKGCMC	2 cut(s)	519, 1582
BseXI	GCAGC	4 cut(s)	162, 391, 811, 1594
BseYI	CCCAGC	1 cut(s)	318
Bsh1236I	CGCG	3 cut(s)	412, 429, 1744
BshFI	GGCC	3 cut(s)	277, 335, 1263
BshNI	GGYRCC	1 cut(s)	1081
BshVI	ATCGAT	1 cut(s)	606
BsiHKCI	CYCGRG	2 cut(s)	55, 85
BsiSI	CCGG	4 cut(s)	41, 97, 168, 270
BslFI	GGGAC	4 cut(s)	83, 308, 859, 892
BslI	CCNNNNNNNGG	7 cut(s)	58, 103, 273, 331, 724, 1259, 1270
BsmAI	GTCTC	2 cut(s)	797, 1239
BsmFI	GGGAC	4 cut(s)	83, 308, 859, 892
BsmI	GAATGC	1 cut(s)	1237
BsnI	GGCC	3 cut(s)	277, 335, 1263
Bso31I	GGTCTC	1 cut(s)	797
BsoBI	CYCGRG	2 cut(s)	55, 85
Bsp119I	TTCGAA	1 cut(s)	182
Bsp1286I	GDGCHC	2 cut(s)	519, 1582
Bsp143I	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
Bsp1720I	GCTNAGC	1 cut(s)	287
Bsp68I	TCGCGA	1 cut(s)	429
BspACI	CCGC	8 cut(s)	110, 267, 279, 300, 412, 711, 866, 1744
BspANI	GGCC	3 cut(s)	277, 335, 1263
BspCNI	CTCAG	3 cut(s)	300, 895, 1617
BspDI	ATCGAT	1 cut(s)	606
BspFNI	CGCG	3 cut(s)	412, 429, 1744
BspLI	GGNNCC	7 cut(s)	95, 205, 323, 324, 715, 1083, 1672
BspMAI	CTGCAG	1 cut(s)	801
BspMI	ACCTGC	1 cut(s)	250
BspOI	GCTAGC	1 cut(s)	1496
BspPI	GGATC	3 cut(s)	448, 589, 929
BspT104I	TTCGAA	1 cut(s)	182
BspT107I	GGYRCC	1 cut(s)	1081
BspTNI	GGTCTC	1 cut(s)	797
BsrDI	GCAATG	1 cut(s)	1503
BsrFI	RCCGGY	2 cut(s)	40, 269
BsrI	ACTGG	3 cut(s)	534, 737, 1085
BssAI	RCCGGY	2 cut(s)	40, 269
BssMI	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
BssNI	GRCGYC	1 cut(s)	38
Bst2UI	CCWGG	2 cut(s)	283, 644
Bst4CI	ACNGT	2 cut(s)	28, 1375
Bst6I	CTCTTC	2 cut(s)	188, 855
BstACI	GRCGYC	1 cut(s)	38
BstAPI	GCANNNNNTGC	1 cut(s)	1214
BstBI	TTCGAA	1 cut(s)	182
BstC8I	GCNNGC	8 cut(s)	42, 271, 275, 279, 822, 947, 1494, 1517
BstDEI	CTNAG	5 cut(s)	287, 903, 1419, 1625, 1708
BstFNI	CGCG	3 cut(s)	412, 429, 1744
BstH2I	RGCGCY	2 cut(s)	294, 1726
BstHHI	GCGC	2 cut(s)	293, 1725
BstKTI	GATC	7 cut(s)	443, 584, 610, 937, 1334, 1346, 1624
BstMAI	GTCTC	2 cut(s)	797, 1239
BstMBI	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 283, 299, 305, 596, 890, 1205, 1214, 1498
BstNI	CCWGG	2 cut(s)	283, 644
BstNSI	RCATGY	2 cut(s)	758, 1226
BstSCI	CCNGG	4 cut(s)	96, 167, 281, 642
BstSFI	CTRYAG	3 cut(s)	797, 858, 1759
BstSLI	GKGCMC	2 cut(s)	519, 1582
BstUI	CGCG	3 cut(s)	412, 429, 1744
BstV1I	GCAGC	4 cut(s)	162, 391, 811, 1594
BstV2I	GAAGAC	1 cut(s)	1656
BstX2I	RGATCY	1 cut(s)	1331
BstYI	RGATCY	1 cut(s)	1331
Bsu15I	ATCGAT	1 cut(s)	606
BsuRI	GGCC	3 cut(s)	277, 335, 1263
BsuTUI	ATCGAT	1 cut(s)	606
BtgZI	GCGATG	1 cut(s)	410
BtsI	GCAGTG	1 cut(s)	1398
BtsIMutI	CAGTG	1 cut(s)	1398
BtuMI	TCGCGA	1 cut(s)	429
BveI	ACCTGC	1 cut(s)	250
Cac8I	GCNNGC	8 cut(s)	42, 271, 275, 279, 822, 947, 1494, 1517
CfoI	GCGC	2 cut(s)	293, 1725
Cfr10I	RCCGGY	2 cut(s)	40, 269
Cfr13I	GGNCC	5 cut(s)	276, 322, 333, 1262, 1670
ClaI	ATCGAT	1 cut(s)	606
CseI	GACGC	2 cut(s)	46, 1432
Csp6I	GTAC	2 cut(s)	792, 1452
CviAII	CATG	9 cut(s)	373, 755, 1064, 1223, 1296, 1427, 1469, 1718, 1752
CviQI	GTAC	2 cut(s)	792, 1452
DdeI	CTNAG	5 cut(s)	287, 903, 1419, 1625, 1708
DpnI	GATC	7 cut(s)	442, 583, 609, 936, 1333, 1345, 1623
DpnII	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
DraI	TTTAAA	2 cut(s)	769, 811
DraIII	CACNNNGTG	1 cut(s)	552
Eam1104I	CTCTTC	2 cut(s)	188, 855
EarI	CTCTTC	2 cut(s)	188, 855
Eco31I	GGTCTC	1 cut(s)	797
Eco47I	GGWCC	2 cut(s)	322, 1670
Eco88I	CYCGRG	2 cut(s)	55, 85
EcoO109I	RGGNCCY	2 cut(s)	322, 1670
EcoRI	GAATTC	2 cut(s)	1023, 1703
EcoRII	CCWGG	2 cut(s)	281, 642
EcoT22I	ATGCAT	2 cut(s)	426, 1237
FaeI	CATG	9 cut(s)	376, 758, 1067, 1226, 1299, 1430, 1472, 1721, 1755
FaqI	GGGAC	4 cut(s)	83, 308, 859, 892
FatI	CATG	9 cut(s)	372, 754, 1063, 1222, 1295, 1426, 1468, 1717, 1751
FauI	CCCGC	2 cut(s)	286, 405
Fnu4HI	GCNGC	8 cut(s)	7, 151, 267, 300, 380, 712, 825, 1608
Fsp4HI	GCNGC	8 cut(s)	7, 151, 267, 300, 380, 712, 825, 1608
FspBI	CTAG	5 cut(s)	842, 963, 1326, 1461, 1493
GlaI	GCGC	2 cut(s)	292, 1724
GluI	GCNGC	8 cut(s)	7, 151, 267, 300, 380, 712, 825, 1608
GsaI	CCCAGC	1 cut(s)	322
GsuI	CTGGAG	1 cut(s)	634
HaeII	RGCGCY	2 cut(s)	294, 1726
HaeIII	GGCC	3 cut(s)	277, 335, 1263
HapII	CCGG	4 cut(s)	41, 97, 168, 270
HgaI	GACGC	2 cut(s)	46, 1432
HhaI	GCGC	2 cut(s)	293, 1725
Hin1I	GRCGYC	1 cut(s)	38
Hin1II	CATG	9 cut(s)	376, 758, 1067, 1226, 1299, 1430, 1472, 1721, 1755
Hin6I	GCGC	2 cut(s)	291, 1723
HinP1I	GCGC	2 cut(s)	291, 1723
HincII	GTYRAC	1 cut(s)	1050
HindII	GTYRAC	1 cut(s)	1050
HindIII	AAGCTT	2 cut(s)	943, 1517
HpaII	CCGG	4 cut(s)	41, 97, 168, 270
HphI	GGTGA	5 cut(s)	46, 127, 149, 173, 466
Hpy166II	GTNNAC	2 cut(s)	457, 1050
Hpy188I	TCNGA	7 cut(s)	93, 208, 904, 1549, 1590, 1626, 1733
Hpy188III	TCNNGA	9 cut(s)	390, 428, 566, 613, 989, 1326, 1461, 1529, 1668
Hpy8I	GTNNAC	2 cut(s)	457, 1050
Hpy99I	CGWCG	2 cut(s)	299, 1314
HpyAV	CCTTC	5 cut(s)	124, 458, 1264, 1392, 1728
HpyCH4III	ACNGT	2 cut(s)	28, 1375
HpyCH4IV	ACGT	2 cut(s)	1144, 1525
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 283, 299, 305, 596, 890, 1205, 1214, 1498
HpyF3I	CTNAG	5 cut(s)	287, 903, 1419, 1625, 1708
HpySE526I	ACGT	2 cut(s)	1144, 1525
Hsp92I	GRCGYC	1 cut(s)	38
Hsp92II	CATG	9 cut(s)	376, 758, 1067, 1226, 1299, 1430, 1472, 1721, 1755
HspAI	GCGC	2 cut(s)	291, 1723
KflI	GGGWCCC	1 cut(s)	322
KroI	GCCGGC	2 cut(s)	40, 269
KroNI	GCCGGC	2 cut(s)	42, 271
Kzo9I	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
LmnI	GCTCC	4 cut(s)	93, 256, 596, 719
Lsp1109I	GCAGC	4 cut(s)	162, 391, 811, 1594
LweI	GCATC	8 cut(s)	328, 433, 908, 967, 1204, 1244, 1309, 1531
MaeI	CTAG	5 cut(s)	842, 963, 1326, 1461, 1493
MaeII	ACGT	2 cut(s)	1144, 1525
MaeIII	GTNAC	4 cut(s)	34, 368, 404, 544
MalI	GATC	7 cut(s)	442, 583, 609, 936, 1333, 1345, 1623
MboI	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
MfeI	CAATTG	1 cut(s)	1386
MflI	RGATCY	1 cut(s)	1331
MhlI	GDGCHC	2 cut(s)	519, 1582
MlyI	GAGTC	5 cut(s)	173, 218, 841, 1409, 1451
MmeI	TCCRAC	1 cut(s)	71
Mph1103I	ATGCAT	2 cut(s)	426, 1237
MreI	CGCCGGCG	1 cut(s)	40
MroNI	GCCGGC	2 cut(s)	40, 269
MroXI	GAANNNNTTC	2 cut(s)	309, 1409
MseI	TTAA	7 cut(s)	363, 768, 810, 834, 1128, 1368, 1488
MslI	CAYNNNNRTG	2 cut(s)	873, 1431
MspA1I	CMGCKG	2 cut(s)	382, 824
MspI	CCGG	4 cut(s)	41, 97, 168, 270
MspR9I	CCNGG	4 cut(s)	98, 169, 283, 644
MunI	CAATTG	1 cut(s)	1386
Mva1269I	GAATGC	1 cut(s)	1237
MvaI	CCWGG	2 cut(s)	283, 644
MvnI	CGCG	3 cut(s)	412, 429, 1744
MwoI	GCNNNNNNNGC	9 cut(s)	12, 283, 299, 305, 596, 890, 1205, 1214, 1498
NaeI	GCCGGC	2 cut(s)	42, 271
NciI	CCSGG	2 cut(s)	98, 169
NdeII	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
NgoMIV	GCCGGC	2 cut(s)	40, 269
NheI	GCTAGC	1 cut(s)	1492
NlaIII	CATG	9 cut(s)	376, 758, 1067, 1226, 1299, 1430, 1472, 1721, 1755
NlaIV	GGNNCC	7 cut(s)	95, 205, 323, 324, 715, 1083, 1672
NmuCI	GTSAC	3 cut(s)	34, 404, 544
NruI	TCGCGA	1 cut(s)	429
NsiI	ATGCAT	2 cut(s)	426, 1237
NspI	RCATGY	2 cut(s)	758, 1226
NspV	TTCGAA	1 cut(s)	182
OliI	CACNNNNGTG	1 cut(s)	873
PciI	ACATGT	1 cut(s)	1222
PctI	GAATGC	1 cut(s)	1237
PdiI	GCCGGC	2 cut(s)	42, 271
PdmI	GAANNNNTTC	2 cut(s)	309, 1409
PfeI	GAWTC	5 cut(s)	509, 1115, 1472, 1504, 1532
PflFI	GACNNNGTC	3 cut(s)	28, 74, 1655
PfoI	TCCNGGA	1 cut(s)	167
PkrI	GCNGC	8 cut(s)	8, 152, 268, 301, 381, 713, 826, 1609
PleI	GAGTC	5 cut(s)	172, 217, 841, 1409, 1451
PpsI	GAGTC	5 cut(s)	172, 217, 841, 1409, 1451
PpuMI	RGGWCCY	2 cut(s)	322, 1670
PscI	ACATGT	1 cut(s)	1222
PshBI	ATTAAT	1 cut(s)	1128
Psp5II	RGGWCCY	2 cut(s)	322, 1670
Psp6I	CCWGG	2 cut(s)	281, 642
PspFI	CCCAGC	1 cut(s)	318
PspGI	CCWGG	2 cut(s)	281, 642
PspN4I	GGNNCC	7 cut(s)	95, 205, 323, 324, 715, 1083, 1672
PspPI	GGNCC	5 cut(s)	276, 322, 333, 1262, 1670
PspPPI	RGGWCCY	2 cut(s)	322, 1670
PstI	CTGCAG	1 cut(s)	801
PsuI	RGATCY	1 cut(s)	1331
PsyI	GACNNNGTC	3 cut(s)	28, 74, 1655
PvuII	CAGCTG	2 cut(s)	382, 824
RruI	TCGCGA	1 cut(s)	429
RsaI	GTAC	2 cut(s)	793, 1453
RsaNI	GTAC	2 cut(s)	792, 1452
RseI	CAYNNNNRTG	2 cut(s)	873, 1431
SaqAI	TTAA	7 cut(s)	363, 768, 810, 834, 1128, 1368, 1488
SatI	GCNGC	8 cut(s)	7, 151, 267, 300, 380, 712, 825, 1608
Sau3AI	GATC	7 cut(s)	440, 581, 607, 934, 1331, 1343, 1621
Sau96I	GGNCC	5 cut(s)	276, 322, 333, 1262, 1670
ScaI	AGTACT	1 cut(s)	793
SchI	GAGTC	5 cut(s)	173, 218, 841, 1409, 1451
ScrFI	CCNGG	4 cut(s)	98, 169, 283, 644
SduI	GDGCHC	2 cut(s)	519, 1582
SfaNI	GCATC	8 cut(s)	328, 433, 908, 967, 1204, 1244, 1309, 1531
SfcI	CTRYAG	3 cut(s)	797, 858, 1759
SfuI	TTCGAA	1 cut(s)	182
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	2 cut(s)	322, 1670
SmiMI	CAYNNNNRTG	2 cut(s)	873, 1431
SmlI	CTYRAG	1 cut(s)	1239
SmoI	CTYRAG	1 cut(s)	1239
SsiI	CCGC	8 cut(s)	110, 267, 279, 300, 412, 711, 866, 1744
SspMI	CTAG	5 cut(s)	842, 963, 1326, 1461, 1493
StyD4I	CCNGG	4 cut(s)	96, 167, 281, 642
TaaI	ACNGT	2 cut(s)	28, 1375
TaiI	ACGT	2 cut(s)	1147, 1528
TaqI	TCGA	9 cut(s)	17, 48, 182, 606, 1089, 1342, 1413, 1539, 1659
TatI	WGTACW	1 cut(s)	791
TauI	GCSGC	3 cut(s)	269, 302, 714
TfiI	GAWTC	5 cut(s)	509, 1115, 1472, 1504, 1532
Tru1I	TTAA	7 cut(s)	363, 768, 810, 834, 1128, 1368, 1488
Tru9I	TTAA	7 cut(s)	363, 768, 810, 834, 1128, 1368, 1488
TscAI	CASTG	1 cut(s)	1398
TseFI	GTSAC	3 cut(s)	34, 404, 544
TseI	GCWGC	5 cut(s)	6, 150, 379, 824, 1607
Tsp45I	GTSAC	3 cut(s)	34, 404, 544
TspDTI	ATGAA	9 cut(s)	203, 389, 477, 932, 1107, 1443, 1464, 1659, 1716
TspRI	CASTG	1 cut(s)	1398
Tth111I	GACNNNGTC	3 cut(s)	28, 74, 1655
VpaK11BI	GGWCC	2 cut(s)	322, 1670
VspI	ATTAAT	1 cut(s)	1128
XapI	RAATTY	4 cut(s)	468, 1023, 1661, 1703
XbaI	TCTAGA	2 cut(s)	1325, 1460
XceI	RCATGY	2 cut(s)	758, 1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	729
XmnI	GAANNNNTTC	2 cut(s)	309, 1409
XspI	CTAG	5 cut(s)	842, 963, 1326, 1461, 1493
ZrmI	AGTACT	1 cut(s)	793
Zsp2I	ATGCAT	2 cut(s)	426, 1237

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.