Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005948

Physical Location & Seq

Genomic Coordinates Reverse (-)

3214631 .. 3218469

Gene Structure 3839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG048900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGGGCTGCGTCAGCTCGAAGCAGACGGTGTCGGTGACGCCGGCGTTCGACCACTCGGGGGCGTTCAGGGACAATGTCGGCAATTCGGGTCGGAGCCGGGTCGGGGAGGCGGTGGTGAAGAAGAAGAAGAAGGGGGGTGAGTTGAGTGGGAGCGAGTTGGGTGAGTCCGGGAGAGCGAGTTCGAATAAGAAGAAGAGTAATGGTTCCGAGTCGTTGAGTTTTCGGTTGAGTAATTTGCAGAGGTATGTGGAGGGGGAGCAGGTCGCCGCCGGTTGGCCGGCCTGGCTCAGCGCCGTCGCCGCCGAAGCCATTCAGGGCTGGGTCCCACTTCGGGCCGATGCCTTTGAGAAATTAGAGAAGATTGGACAGGGAACGTATAGTAGTGTGTTCCGAGCGCGTGACCTGGAGACTGGGAAGTTAGTTGCTTTGAAGAAGGTGCGGTTCGACAATTTTGAGCCTGAGAGCGTCAGGTTTATGGCCCGAGAAATCTTGATTCTCAGAAGGCTTGACCATCCAAATGTCATTAAATTGGAGGGCTTAATTACTTCGCGGTTGTCATGTAGCATATACCTTGTGTTTGAGTACATGGAACATGACATTACTGGACTCCTGTCTAACCCCGACATCAAGTTCAGTGAAGCACAGATTAAATGTTACATGAAGCAGCTGTTATCTGGACTTGAACATTGTCACTCGCGGGGTGTAATGCATCGCGACATAAAAGGATCAAATCTTCTGGTGAACAATGAAGGAATTTTGAAGATGGCTGATTTTGGATTGGCAAACTTCTGTGATTCTGGGCACAAGCAACCCCTTACCAGTCGTGTTGTCACTTTGTGGTATCGTCCTCCTGAACTTTTGCTTGGATCAACTGCCTATGGAGCTTATATCGATCTCTGGAGTGTTGGCTGTGCATTTGCAGAACTCCTGGTTGGGAAACCTGTTCTTCAAGGGCGAACAGAGGTTGAACAATTACACAAGATTTTCAAGCTCTGCGGCTCCCCACCGGAAGAATACTGGAAAAAGTCCAAACTTCCACATGCAACTCTATTTAAACCCCAACAACCTTATGATAGTACTCTGCAGGAGACCTTTAAAGATTTGCCAGCTGCCACTTTTAACCTACTAGGGACTCTTCTTTCTGTAGAACCGCACAAGCGTGGGACTGCCTCCTCTGCTCTTGCATCTGAGTATTTCAAAATGAAGCCTTATGCCTGTGATCCATCAAGCTTGCCAATTTACCCACCTAGCAAAGAGATTGATGCGAAAAATCGGGAGGAGGCAAAGAGGAAGAAGATTGGTGGTAGAATTCGTGGAGGCGAAACAAGAAAGTCAACGAGAAAATCACATGGAATAAGTAAATTGGCACCAGTCGAGGACTTGGCAACCCAAGTGCAAGATTCATATAAAATTAATGGCACTAATGGACGTATTACGAAGCAAGAAAATGGTGTCATAGGCAGGGAGTTGCCGAAGCCATCAGCTTCTAAAGCAGAAGAGGCTTCACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCATTAGAGGTTTCTACATCAAGTGGCTTCGCATGGGCAAAAAGACGACGAGATGATGCTTCTAGAAGATCTCATACTCGATCTATTTCAAAAGGACACATATTTAACACAGTAGAACCTTCAATTGCAGTGCATACAAGGAAGAACTTCGACTCTAAGACGCATGAAAATGGGGAATACAGAGGGCGTACTGACTCTAGAGGGCATGATTCATACGAGATTGTTAAGCTAGCAATGCTGAATCAGTGGGGCAAGCTTGAACGTCCAGATTCTTTCGATGCTTCTGATGGGTATCACTCGCAGGAATTATCGAGGGCACTTTATCAGAGAGAGGAAAGGGTAGCTGCTACTAAAAGTGATCTGAGTTTTCCACTTGATGATGAAGAAGACAAGGTTGAATTTTCAGGACCCTTGTTATCTCAACCCTATAAAGTTGATGAATTTTTAGAAAGGCATGAGCGCCACATCAGAAGGGCAACGCGGAACTCATGGTTCTATAGAGGTAAGAAGCAAGGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009966 GO:0009987 GO:0010646 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0097472 GO:0098542 GO:0140096 GO:1900424 GO:1900426 GO:1901564 GO:1902288 GO:1902290 GO:2000031 GO:2001023 GO:2001038

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

689

Amino Acids

77.04

Weight (kDa)

9.36

Isoelectric Point (pI)

44.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	115 - 399	1.2e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	117 - 328	9.8e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005948)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18670 AT1G18670 AT1G18670 AT1G74330 AT1G74330 AT1G74330
fragaria_vesca	FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470 FvH4_5g14470
malus_domestica	MD06G1198100.v1.1 MD14G1205700.v1.1
prunus_persica	Prupe.5G199000_v2.0.a1 Prupe.5G199000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0182181
rosa_laevigata	RLG00000005143
rosa_multiflora	Rmu_sc0000003.1_g000017
rosa_roxburghii	Rroxscaffold_3G00271440
rosa_rugosa	Rorug06G0445900 Rorug06G0445900
rosa_samantha	Rh7AG049000 Rh7BG048900 Rh7CG050300 Rh7DG048200
rosa_wichuraiana	Rw7G004000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	250
AccB1I	GGYRCC	1 cut(s)	1366
AccII	CGCG	5 cut(s)	397, 550, 697, 714, 2029
AciI	CCGC	9 cut(s)	110, 267, 300, 439, 550, 697, 996, 1151, 2029
AclWI	GGATC	3 cut(s)	733, 874, 1214
AcoI	YGGCCR	1 cut(s)	275
AcsI	RAATTY	4 cut(s)	753, 1308, 1946, 1988
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	837
AfaI	GTAC	3 cut(s)	584, 1078, 1738
AfiI	CCNNNNNNNGG	6 cut(s)	58, 103, 273, 331, 1544, 1555
AflIII	ACRYGT	1 cut(s)	1507
AjnI	CCWGG	3 cut(s)	281, 402, 927
AjuI	GAANNNNNNNTTGG	4 cut(s)	846, 878, 915, 947
AleI	CACNNNNGTG	1 cut(s)	1158
AloI	GAACNNNNNNTCC	2 cut(s)	163, 195
Alw26I	GTCTC	3 cut(s)	401, 1082, 1524
AlwI	GGATC	3 cut(s)	733, 874, 1214
Ama87I	CYCGRG	2 cut(s)	55, 480
AoxI	GGCC	5 cut(s)	275, 279, 333, 477, 1546
ApeKI	GCWGC	4 cut(s)	6, 664, 1109, 1892
ApoI	RAATTY	4 cut(s)	753, 1308, 1946, 1988
AseI	ATTAAT	1 cut(s)	1413
Asp700I	GAANNNNTTC	2 cut(s)	309, 1694
AspLEI	GCGC	3 cut(s)	293, 397, 2010
AspS9I	GGNCC	5 cut(s)	322, 333, 478, 1547, 1955
AsuC2I	CCSGG	2 cut(s)	98, 169
AsuHPI	GGTGA	5 cut(s)	46, 127, 149, 173, 751
AsuII	TTCGAA	1 cut(s)	182
AsuNHI	GCTAGC	1 cut(s)	1777
AvaI	CYCGRG	2 cut(s)	55, 480
AvaII	GGWCC	2 cut(s)	322, 1955
BaeGI	GKGCMC	2 cut(s)	804, 1867
BanI	GGYRCC	1 cut(s)	1366
BarI	GAAGNNNNNNTAC	2 cut(s)	1606, 1638
BbsI	GAAGAC	1 cut(s)	1941
BbvI	GCAGC	3 cut(s)	676, 1096, 1879
BccI	CCATC	5 cut(s)	519, 757, 1231, 1486, 1829
BceAI	ACGGC	1 cut(s)	278
BciT130I	CCWGG	3 cut(s)	283, 404, 929
BcnI	CCSGG	2 cut(s)	98, 169
BcoDI	GTCTC	3 cut(s)	401, 1082, 1524
BfaI	CTAG	5 cut(s)	1127, 1248, 1611, 1746, 1778
BfmI	CTRYAG	3 cut(s)	1082, 1143, 2044
BfoI	RGCGCY	2 cut(s)	294, 2011
BfuAI	ACCTGC	1 cut(s)	250
BglI	GCCNNNNNGGC	1 cut(s)	283
BglII	AGATCT	1 cut(s)	1616
BisI	GCNGC	7 cut(s)	7, 267, 300, 665, 997, 1110, 1893
BlpI	GCTNAGC	1 cut(s)	287
BlsI	GCNGC	7 cut(s)	8, 268, 301, 666, 998, 1111, 1894
BmcAI	AGTACT	1 cut(s)	1078
Bme1390I	CCNGG	5 cut(s)	98, 169, 283, 404, 929
Bme18I	GGWCC	2 cut(s)	322, 1955
BmeT110I	CYCGRG	2 cut(s)	55, 480
BmgT120I	GGNCC	5 cut(s)	322, 333, 478, 1547, 1955
BmiI	GGNNCC	7 cut(s)	95, 205, 323, 324, 1000, 1368, 1957
BmrFI	CCNGG	5 cut(s)	98, 169, 283, 404, 929
BmrI	ACTGGG	1 cut(s)	420
BmsI	GCATC	7 cut(s)	328, 718, 1193, 1252, 1529, 1594, 1816
BmtI	GCTAGC	1 cut(s)	1781
BmuI	ACTGGG	1 cut(s)	420
BoxI	GACNNNNGTC	1 cut(s)	610
BpiI	GAAGAC	1 cut(s)	1941
BpmI	CTGGAG	2 cut(s)	425, 919
Bpu1102I	GCTNAGC	1 cut(s)	287
Bpu14I	TTCGAA	1 cut(s)	182
BpuEI	CTTGAG	1 cut(s)	1509
BpuMI	CCSGG	2 cut(s)	98, 169
Bsa29I	ATCGAT	1 cut(s)	891
BsaBI	GATNNNNATC	1 cut(s)	1839
BsaHI	GRCGYC	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	1082
BsaWI	WCCGGW	1 cut(s)	1006
BsaXI	ACNNNNNCTCC	2 cut(s)	163, 193
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 103, 273, 331, 1544, 1555
Bse118I	RCCGGY	3 cut(s)	40, 269, 277
Bse1I	ACTGG	5 cut(s)	415, 607, 819, 1022, 1370
Bse3DI	GCAATG	1 cut(s)	1788
Bse8I	GATNNNNATC	1 cut(s)	1839
BseBI	CCWGG	3 cut(s)	283, 404, 929
BseCI	ATCGAT	1 cut(s)	891
BseGI	GGATG	1 cut(s)	511
BseJI	GATNNNNATC	1 cut(s)	1839
BseLI	CCNNNNNNNGG	6 cut(s)	58, 103, 273, 331, 1544, 1555
BseMI	GCAATG	1 cut(s)	1788
BseMII	CTCAG	5 cut(s)	301, 450, 511, 1179, 1901
BseNI	ACTGG	5 cut(s)	415, 607, 819, 1022, 1370
BseRI	GAGGAG	2 cut(s)	1162, 1292
BseSI	GKGCMC	2 cut(s)	804, 1867
BseXI	GCAGC	3 cut(s)	676, 1096, 1879
BseYI	CCCAGC	1 cut(s)	318
Bsh1236I	CGCG	5 cut(s)	397, 550, 697, 714, 2029
BshFI	GGCC	5 cut(s)	277, 281, 335, 479, 1548
BshNI	GGYRCC	1 cut(s)	1366
BshVI	ATCGAT	1 cut(s)	891
BsiHKCI	CYCGRG	2 cut(s)	55, 480
BsiSI	CCGG	6 cut(s)	41, 97, 168, 270, 278, 1007
BslFI	GGGAC	4 cut(s)	83, 308, 1144, 1177
BslI	CCNNNNNNNGG	6 cut(s)	58, 103, 273, 331, 1544, 1555
BsmAI	GTCTC	3 cut(s)	401, 1082, 1524
BsmFI	GGGAC	4 cut(s)	83, 308, 1144, 1177
BsmI	GAATGC	1 cut(s)	1522
BsnI	GGCC	5 cut(s)	277, 281, 335, 479, 1548
Bso31I	GGTCTC	1 cut(s)	1082
BsoBI	CYCGRG	2 cut(s)	55, 480
Bsp119I	TTCGAA	1 cut(s)	182
Bsp1286I	GDGCHC	2 cut(s)	804, 1867
Bsp143I	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
Bsp1720I	GCTNAGC	1 cut(s)	287
Bsp68I	TCGCGA	1 cut(s)	714
BspACI	CCGC	9 cut(s)	110, 267, 300, 439, 550, 697, 996, 1151, 2029
BspANI	GGCC	5 cut(s)	277, 281, 335, 479, 1548
BspCNI	CTCAG	5 cut(s)	300, 451, 510, 1180, 1902
BspDI	ATCGAT	1 cut(s)	891
BspFNI	CGCG	5 cut(s)	397, 550, 697, 714, 2029
BspLI	GGNNCC	7 cut(s)	95, 205, 323, 324, 1000, 1368, 1957
BspMAI	CTGCAG	1 cut(s)	1086
BspMI	ACCTGC	1 cut(s)	250
BspOI	GCTAGC	1 cut(s)	1781
BspPI	GGATC	3 cut(s)	733, 874, 1214
BspT104I	TTCGAA	1 cut(s)	182
BspT107I	GGYRCC	1 cut(s)	1366
BspTNI	GGTCTC	1 cut(s)	1082
BsrDI	GCAATG	1 cut(s)	1788
BsrFI	RCCGGY	3 cut(s)	40, 269, 277
BsrI	ACTGG	5 cut(s)	415, 607, 819, 1022, 1370
BssAI	RCCGGY	3 cut(s)	40, 269, 277
BssMI	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
BssNI	GRCGYC	1 cut(s)	38
Bst2UI	CCWGG	3 cut(s)	283, 404, 929
Bst4CI	ACNGT	2 cut(s)	28, 1660
Bst6I	CTCTTC	3 cut(s)	188, 1140, 1491
BstACI	GRCGYC	1 cut(s)	38
BstBI	TTCGAA	1 cut(s)	182
BstC8I	GCNNGC	6 cut(s)	42, 279, 1107, 1232, 1779, 1802
BstDEI	CTNAG	6 cut(s)	287, 459, 497, 1188, 1704, 1910
BstF5I	GGATG	1 cut(s)	511
BstFNI	CGCG	5 cut(s)	397, 550, 697, 714, 2029
BstH2I	RGCGCY	2 cut(s)	294, 2011
BstHHI	GCGC	3 cut(s)	293, 397, 2010
BstKTI	GATC	7 cut(s)	728, 869, 895, 1222, 1619, 1631, 1909
BstMAI	GTCTC	3 cut(s)	401, 1082, 1524
BstMBI	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 283, 299, 305, 881, 1175, 1490, 1499, 1783
BstNI	CCWGG	3 cut(s)	283, 404, 929
BstNSI	RCATGY	2 cut(s)	1043, 1511
BstPAI	GACNNNNGTC	1 cut(s)	610
BstSCI	CCNGG	5 cut(s)	96, 167, 281, 402, 927
BstSFI	CTRYAG	3 cut(s)	1082, 1143, 2044
BstSLI	GKGCMC	2 cut(s)	804, 1867
BstUI	CGCG	5 cut(s)	397, 550, 697, 714, 2029
BstV1I	GCAGC	3 cut(s)	676, 1096, 1879
BstV2I	GAAGAC	1 cut(s)	1941
BstX2I	RGATCY	1 cut(s)	1616
BstYI	RGATCY	1 cut(s)	1616
Bsu15I	ATCGAT	1 cut(s)	891
BsuRI	GGCC	5 cut(s)	277, 281, 335, 479, 1548
BsuTUI	ATCGAT	1 cut(s)	891
BtgZI	GCGATG	1 cut(s)	695
BtsCI	GGATG	1 cut(s)	511
BtsI	GCAGTG	1 cut(s)	1683
BtsIMutI	CAGTG	3 cut(s)	640, 1683, 1799
BtuMI	TCGCGA	1 cut(s)	714
BveI	ACCTGC	1 cut(s)	250
Cac8I	GCNNGC	6 cut(s)	42, 279, 1107, 1232, 1779, 1802
CfoI	GCGC	3 cut(s)	293, 397, 2010
Cfr10I	RCCGGY	3 cut(s)	40, 269, 277
Cfr13I	GGNCC	5 cut(s)	322, 333, 478, 1547, 1955
ClaI	ATCGAT	1 cut(s)	891
CseI	GACGC	3 cut(s)	46, 454, 1717
Csp6I	GTAC	3 cut(s)	583, 1077, 1737
CviQI	GTAC	3 cut(s)	583, 1077, 1737
DdeI	CTNAG	6 cut(s)	287, 459, 497, 1188, 1704, 1910
DpnI	GATC	7 cut(s)	727, 868, 894, 1221, 1618, 1630, 1908
DpnII	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
DraI	TTTAAA	2 cut(s)	1054, 1096
DraIII	CACNNNGTG	1 cut(s)	837
EaeI	YGGCCR	1 cut(s)	275
Eam1104I	CTCTTC	3 cut(s)	188, 1140, 1491
EarI	CTCTTC	3 cut(s)	188, 1140, 1491
Eco31I	GGTCTC	1 cut(s)	1082
Eco47I	GGWCC	2 cut(s)	322, 1955
Eco88I	CYCGRG	2 cut(s)	55, 480
EcoO109I	RGGNCCY	2 cut(s)	322, 1955
EcoRI	GAATTC	1 cut(s)	1308
EcoRII	CCWGG	3 cut(s)	281, 402, 927
EcoT22I	ATGCAT	2 cut(s)	711, 1522
FaqI	GGGAC	4 cut(s)	83, 308, 1144, 1177
FauI	CCCGC	1 cut(s)	690
Fnu4HI	GCNGC	7 cut(s)	7, 267, 300, 665, 997, 1110, 1893
FokI	GGATG	1 cut(s)	498
FseI	GGCCGGCC	1 cut(s)	281
Fsp4HI	GCNGC	7 cut(s)	7, 267, 300, 665, 997, 1110, 1893
FspBI	CTAG	5 cut(s)	1127, 1248, 1611, 1746, 1778
GlaI	GCGC	3 cut(s)	292, 396, 2009
GluI	GCNGC	7 cut(s)	7, 267, 300, 665, 997, 1110, 1893
GsaI	CCCAGC	1 cut(s)	322
GsuI	CTGGAG	2 cut(s)	425, 919
HaeII	RGCGCY	2 cut(s)	294, 2011
HaeIII	GGCC	5 cut(s)	277, 281, 335, 479, 1548
HapII	CCGG	6 cut(s)	41, 97, 168, 270, 278, 1007
HgaI	GACGC	3 cut(s)	46, 454, 1717
HhaI	GCGC	3 cut(s)	293, 397, 2010
Hin1I	GRCGYC	1 cut(s)	38
Hin6I	GCGC	3 cut(s)	291, 395, 2008
HinP1I	GCGC	3 cut(s)	291, 395, 2008
HincII	GTYRAC	1 cut(s)	1335
HindII	GTYRAC	1 cut(s)	1335
HindIII	AAGCTT	2 cut(s)	1228, 1802
HpaII	CCGG	6 cut(s)	41, 97, 168, 270, 278, 1007
HphI	GGTGA	5 cut(s)	46, 127, 149, 173, 751
Hpy166II	GTNNAC	2 cut(s)	742, 1335
Hpy188I	TCNGA	9 cut(s)	93, 208, 392, 500, 1189, 1834, 1875, 1911, 2018
Hpy8I	GTNNAC	2 cut(s)	742, 1335
Hpy99I	CGWCG	2 cut(s)	299, 1599
HpyAV	CCTTC	7 cut(s)	124, 427, 495, 743, 1549, 1677, 2013
HpyCH4III	ACNGT	2 cut(s)	28, 1660
HpyCH4IV	ACGT	3 cut(s)	374, 1429, 1810
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 283, 299, 305, 881, 1175, 1490, 1499, 1783
HpyF3I	CTNAG	6 cut(s)	287, 459, 497, 1188, 1704, 1910
HpySE526I	ACGT	3 cut(s)	374, 1429, 1810
Hsp92I	GRCGYC	1 cut(s)	38
HspAI	GCGC	3 cut(s)	291, 395, 2008
KflI	GGGWCCC	1 cut(s)	322
KroI	GCCGGC	2 cut(s)	40, 277
KroNI	GCCGGC	2 cut(s)	42, 279
Kzo9I	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
LmnI	GCTCC	5 cut(s)	93, 150, 256, 881, 1004
Lsp1109I	GCAGC	3 cut(s)	676, 1096, 1879
LweI	GCATC	7 cut(s)	328, 718, 1193, 1252, 1529, 1594, 1816
MaeI	CTAG	5 cut(s)	1127, 1248, 1611, 1746, 1778
MaeII	ACGT	3 cut(s)	374, 1429, 1810
MaeIII	GTNAC	5 cut(s)	34, 398, 653, 689, 829
MalI	GATC	7 cut(s)	727, 868, 894, 1221, 1618, 1630, 1908
MboI	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
MfeI	CAATTG	1 cut(s)	1671
MflI	RGATCY	1 cut(s)	1616
MhlI	GDGCHC	2 cut(s)	804, 1867
MlyI	GAGTC	6 cut(s)	173, 218, 600, 1126, 1694, 1736
MmeI	TCCRAC	1 cut(s)	71
Mph1103I	ATGCAT	2 cut(s)	711, 1522
MreI	CGCCGGCG	1 cut(s)	40
MroNI	GCCGGC	2 cut(s)	40, 277
MroXI	GAANNNNTTC	2 cut(s)	309, 1694
MseI	TTAA	9 cut(s)	525, 539, 648, 1053, 1095, 1119, 1413, 1653, 1773
MslI	CAYNNNNRTG	3 cut(s)	516, 1158, 1716
MspA1I	CMGCKG	2 cut(s)	667, 1109
MspI	CCGG	6 cut(s)	41, 97, 168, 270, 278, 1007
MspR9I	CCNGG	5 cut(s)	98, 169, 283, 404, 929
MunI	CAATTG	1 cut(s)	1671
Mva1269I	GAATGC	1 cut(s)	1522
MvaI	CCWGG	3 cut(s)	283, 404, 929
MvnI	CGCG	5 cut(s)	397, 550, 697, 714, 2029
MwoI	GCNNNNNNNGC	9 cut(s)	12, 283, 299, 305, 881, 1175, 1490, 1499, 1783
NaeI	GCCGGC	2 cut(s)	42, 279
NciI	CCSGG	2 cut(s)	98, 169
NdeII	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
NgoMIV	GCCGGC	2 cut(s)	40, 277
NheI	GCTAGC	1 cut(s)	1777
NlaIV	GGNNCC	7 cut(s)	95, 205, 323, 324, 1000, 1368, 1957
NmuCI	GTSAC	4 cut(s)	34, 398, 689, 829
NruI	TCGCGA	1 cut(s)	714
NsiI	ATGCAT	2 cut(s)	711, 1522
NspI	RCATGY	2 cut(s)	1043, 1511
NspV	TTCGAA	1 cut(s)	182
OliI	CACNNNNGTG	1 cut(s)	1158
PciI	ACATGT	1 cut(s)	1507
PctI	GAATGC	1 cut(s)	1522
PdiI	GCCGGC	2 cut(s)	42, 279
PdmI	GAANNNNTTC	2 cut(s)	309, 1694
PfeI	GAWTC	6 cut(s)	493, 794, 1400, 1757, 1789, 1817
PflFI	GACNNNGTC	2 cut(s)	28, 74
PfoI	TCCNGGA	1 cut(s)	167
PkrI	GCNGC	7 cut(s)	8, 268, 301, 666, 998, 1111, 1894
PleI	GAGTC	6 cut(s)	172, 217, 600, 1126, 1694, 1736
PpsI	GAGTC	6 cut(s)	172, 217, 600, 1126, 1694, 1736
PpuMI	RGGWCCY	2 cut(s)	322, 1955
PscI	ACATGT	1 cut(s)	1507
PshAI	GACNNNNGTC	1 cut(s)	610
PshBI	ATTAAT	1 cut(s)	1413
Psp5II	RGGWCCY	2 cut(s)	322, 1955
Psp6I	CCWGG	3 cut(s)	281, 402, 927
PspFI	CCCAGC	1 cut(s)	318
PspGI	CCWGG	3 cut(s)	281, 402, 927
PspN4I	GGNNCC	7 cut(s)	95, 205, 323, 324, 1000, 1368, 1957
PspPI	GGNCC	5 cut(s)	322, 333, 478, 1547, 1955
PspPPI	RGGWCCY	2 cut(s)	322, 1955
PstI	CTGCAG	1 cut(s)	1086
PsuI	RGATCY	1 cut(s)	1616
PsyI	GACNNNGTC	2 cut(s)	28, 74
PvuII	CAGCTG	2 cut(s)	667, 1109
RigI	GGCCGGCC	1 cut(s)	281
RruI	TCGCGA	1 cut(s)	714
RsaI	GTAC	3 cut(s)	584, 1078, 1738
RsaNI	GTAC	3 cut(s)	583, 1077, 1737
RseI	CAYNNNNRTG	3 cut(s)	516, 1158, 1716
SaqAI	TTAA	9 cut(s)	525, 539, 648, 1053, 1095, 1119, 1413, 1653, 1773
SatI	GCNGC	7 cut(s)	7, 267, 300, 665, 997, 1110, 1893
Sau3AI	GATC	7 cut(s)	725, 866, 892, 1219, 1616, 1628, 1906
Sau96I	GGNCC	5 cut(s)	322, 333, 478, 1547, 1955
ScaI	AGTACT	1 cut(s)	1078
SchI	GAGTC	6 cut(s)	173, 218, 600, 1126, 1694, 1736
ScrFI	CCNGG	5 cut(s)	98, 169, 283, 404, 929
SduI	GDGCHC	2 cut(s)	804, 1867
SfaNI	GCATC	7 cut(s)	328, 718, 1193, 1252, 1529, 1594, 1816
SfcI	CTRYAG	3 cut(s)	1082, 1143, 2044
SfuI	TTCGAA	1 cut(s)	182
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	2 cut(s)	322, 1955
SmiMI	CAYNNNNRTG	3 cut(s)	516, 1158, 1716
SmlI	CTYRAG	1 cut(s)	1524
SmoI	CTYRAG	1 cut(s)	1524
SsiI	CCGC	9 cut(s)	110, 267, 300, 439, 550, 697, 996, 1151, 2029
SspMI	CTAG	5 cut(s)	1127, 1248, 1611, 1746, 1778
StyD4I	CCNGG	5 cut(s)	96, 167, 281, 402, 927
TaaI	ACNGT	2 cut(s)	28, 1660
TaiI	ACGT	3 cut(s)	377, 1432, 1813
TatI	WGTACW	2 cut(s)	582, 1076
TauI	GCSGC	3 cut(s)	269, 302, 999
TfiI	GAWTC	6 cut(s)	493, 794, 1400, 1757, 1789, 1817
Tru1I	TTAA	9 cut(s)	525, 539, 648, 1053, 1095, 1119, 1413, 1653, 1773
Tru9I	TTAA	9 cut(s)	525, 539, 648, 1053, 1095, 1119, 1413, 1653, 1773
TscAI	CASTG	3 cut(s)	640, 1683, 1799
TseFI	GTSAC	4 cut(s)	34, 398, 689, 829
TseI	GCWGC	4 cut(s)	6, 664, 1109, 1892
Tsp45I	GTSAC	4 cut(s)	34, 398, 689, 829
TspDTI	ATGAA	8 cut(s)	674, 762, 1217, 1392, 1728, 1749, 1944, 2001
TspRI	CASTG	3 cut(s)	640, 1683, 1799
Tth111I	GACNNNGTC	2 cut(s)	28, 74
VpaK11BI	GGWCC	2 cut(s)	322, 1955
VspI	ATTAAT	1 cut(s)	1413
XapI	RAATTY	4 cut(s)	753, 1308, 1946, 1988
XbaI	TCTAGA	2 cut(s)	1610, 1745
XceI	RCATGY	2 cut(s)	1043, 1511
XmnI	GAANNNNTTC	2 cut(s)	309, 1694
XspI	CTAG	5 cut(s)	1127, 1248, 1611, 1746, 1778
ZrmI	AGTACT	1 cut(s)	1078
Zsp2I	ATGCAT	2 cut(s)	711, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.