No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G61340 AT5G61340 |
| fragaria_vesca | FvH4_5g14500 |
| malus_domestica | MD06G1197900.v1.1 MD14G1205500.v1.1 |
| prunus_persica | Prupe.5G198800_v2.0.a1 Prupe.5G198800_v2.0.a1 |
| pyrus_communis | pycom06g17490 pycom14g17000 |
| rosa_chinensis | RchiOBHm_Chr7g0182161 |
| rosa_laevigata | RLG00000005145 |
| rosa_multiflora | Rmu_sc0000003.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00271460 |
| rosa_rugosa | Rorug06G0445800 |
| rosa_samantha | Rh7AG048800 Rh7BG048700 Rh7CG050100 Rh7DG048000 |
| rosa_wichuraiana | Rw7G003980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 205 |
| AclWI | GGATC | 1 cut(s) | 811 |
| AfaI | GTAC | 1 cut(s) | 845 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 766 |
| AgsI | TTSAA | 8 cut(s) | 174, 499, 699, 791, 810, 892, 920, 958 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 144, 176, 783, 815 |
| AluBI | AGCT | 4 cut(s) | 729, 799, 879, 897 |
| AluI | AGCT | 4 cut(s) | 729, 799, 879, 897 |
| AlwI | GGATC | 1 cut(s) | 811 |
| ApeKI | GCWGC | 3 cut(s) | 227, 740, 897 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 694 |
| AsuC2I | CCSGG | 1 cut(s) | 562 |
| AsuHPI | GGTGA | 5 cut(s) | 88, 259, 310, 331, 522 |
| BbsI | GAAGAC | 1 cut(s) | 965 |
| BbvI | GCAGC | 3 cut(s) | 239, 727, 884 |
| BccI | CCATC | 2 cut(s) | 203, 438 |
| BcnI | CCSGG | 1 cut(s) | 562 |
| BisI | GCNGC | 3 cut(s) | 228, 741, 898 |
| BlsI | GCNGC | 3 cut(s) | 229, 742, 899 |
| Bme1390I | CCNGG | 1 cut(s) | 562 |
| BmrFI | CCNGG | 1 cut(s) | 562 |
| BmsI | GCATC | 2 cut(s) | 214, 566 |
| BpiI | GAAGAC | 1 cut(s) | 965 |
| BpmI | CTGGAG | 1 cut(s) | 194 |
| BpuEI | CTTGAG | 2 cut(s) | 527, 650 |
| BpuMI | CCSGG | 1 cut(s) | 562 |
| BsaJI | CCNNGG | 1 cut(s) | 561 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 766 |
| Bse3DI | GCAATG | 3 cut(s) | 36, 489, 831 |
| BseDI | CCNNGG | 1 cut(s) | 561 |
| BseGI | GGATG | 2 cut(s) | 195, 557 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 766 |
| BseMI | GCAATG | 3 cut(s) | 36, 489, 831 |
| BseMII | CTCAG | 2 cut(s) | 144, 471 |
| BseRI | GAGGAG | 1 cut(s) | 323 |
| BseXI | GCAGC | 3 cut(s) | 239, 727, 884 |
| BsgI | GTGCAG | 1 cut(s) | 381 |
| BsiSI | CCGG | 1 cut(s) | 561 |
| BslFI | GGGAC | 1 cut(s) | 646 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 766 |
| BsmFI | GGGAC | 1 cut(s) | 646 |
| Bsp143I | GATC | 2 cut(s) | 59, 803 |
| BspACI | CCGC | 1 cut(s) | 205 |
| BspCNI | CTCAG | 2 cut(s) | 143, 470 |
| BspHI | TCATGA | 1 cut(s) | 983 |
| BspPI | GGATC | 1 cut(s) | 811 |
| BsrDI | GCAATG | 3 cut(s) | 36, 489, 831 |
| BssECI | CCNNGG | 1 cut(s) | 561 |
| BssMI | GATC | 2 cut(s) | 59, 803 |
| Bst4CI | ACNGT | 1 cut(s) | 472 |
| Bst6I | CTCTTC | 5 cut(s) | 250, 298, 397, 551, 635 |
| BstC8I | GCNNGC | 1 cut(s) | 232 |
| BstDEI | CTNAG | 3 cut(s) | 53, 130, 457 |
| BstF5I | GGATG | 2 cut(s) | 195, 557 |
| BstKTI | GATC | 2 cut(s) | 62, 806 |
| BstMBI | GATC | 2 cut(s) | 59, 803 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 116, 563, 749 |
| BstSCI | CCNGG | 1 cut(s) | 560 |
| BstV1I | GCAGC | 3 cut(s) | 239, 727, 884 |
| BstV2I | GAAGAC | 1 cut(s) | 965 |
| BstX2I | RGATCY | 1 cut(s) | 803 |
| BstYI | RGATCY | 1 cut(s) | 803 |
| BtsCI | GGATG | 2 cut(s) | 195, 557 |
| BtsIMutI | CAGTG | 3 cut(s) | 144, 477, 924 |
| Cac8I | GCNNGC | 1 cut(s) | 232 |
| CciI | TCATGA | 1 cut(s) | 983 |
| Csp6I | GTAC | 1 cut(s) | 844 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 837, 872 |
| CviAII | CATG | 2 cut(s) | 883, 984 |
| CviQI | GTAC | 1 cut(s) | 844 |
| DdeI | CTNAG | 3 cut(s) | 53, 130, 457 |
| DpnI | GATC | 2 cut(s) | 61, 805 |
| DpnII | GATC | 2 cut(s) | 59, 803 |
| Eam1104I | CTCTTC | 5 cut(s) | 250, 298, 397, 551, 635 |
| EarI | CTCTTC | 5 cut(s) | 250, 298, 397, 551, 635 |
| FaeI | CATG | 2 cut(s) | 886, 987 |
| FaiI | YATR | 8 cut(s) | 116, 353, 425, 614, 781, 884, 948, 985 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 783, 815 |
| FaqI | GGGAC | 1 cut(s) | 646 |
| FatI | CATG | 2 cut(s) | 882, 983 |
| Fnu4HI | GCNGC | 3 cut(s) | 228, 741, 898 |
| FokI | GGATG | 2 cut(s) | 182, 544 |
| Fsp4HI | GCNGC | 3 cut(s) | 228, 741, 898 |
| GluI | GCNGC | 3 cut(s) | 228, 741, 898 |
| GsuI | CTGGAG | 1 cut(s) | 194 |
| HapII | CCGG | 1 cut(s) | 561 |
| Hin1II | CATG | 2 cut(s) | 886, 987 |
| HindIII | AAGCTT | 1 cut(s) | 797 |
| HinfI | GANTC | 3 cut(s) | 49, 214, 527 |
| HpaII | CCGG | 1 cut(s) | 561 |
| HphI | GGTGA | 5 cut(s) | 88, 259, 310, 331, 522 |
| Hpy188I | TCNGA | 2 cut(s) | 526, 686 |
| Hpy188III | TCNNGA | 4 cut(s) | 211, 506, 863, 984 |
| HpyAV | CCTTC | 9 cut(s) | 136, 174, 325, 337, 393, 505, 551, 785, 967 |
| HpyCH4III | ACNGT | 1 cut(s) | 472 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 29, 227, 398, 438, 609, 743, 900 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 116, 563, 749 |
| HpyF3I | CTNAG | 3 cut(s) | 53, 130, 457 |
| Hsp92II | CATG | 2 cut(s) | 886, 987 |
| Kzo9I | GATC | 2 cut(s) | 59, 803 |
| LpnPI | CCDG | 7 cut(s) | 216, 224, 574, 615, 698, 735, 751 |
| Lsp1109I | GCAGC | 3 cut(s) | 239, 727, 884 |
| LweI | GCATC | 2 cut(s) | 214, 566 |
| MaeIII | GTNAC | 1 cut(s) | 650 |
| MalI | GATC | 2 cut(s) | 61, 805 |
| MboI | GATC | 2 cut(s) | 59, 803 |
| MfeI | CAATTG | 2 cut(s) | 102, 744 |
| MflI | RGATCY | 1 cut(s) | 803 |
| MlyI | GAGTC | 2 cut(s) | 223, 521 |
| MmeI | TCCRAC | 1 cut(s) | 103 |
| MroXI | GAANNNNTTC | 1 cut(s) | 694 |
| MspI | CCGG | 1 cut(s) | 561 |
| MspR9I | CCNGG | 1 cut(s) | 562 |
| MunI | CAATTG | 2 cut(s) | 102, 744 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 116, 563, 749 |
| NciI | CCSGG | 1 cut(s) | 562 |
| NdeII | GATC | 2 cut(s) | 59, 803 |
| NlaIII | CATG | 2 cut(s) | 886, 987 |
| PagI | TCATGA | 1 cut(s) | 983 |
| PdmI | GAANNNNTTC | 1 cut(s) | 694 |
| PfeI | GAWTC | 1 cut(s) | 49 |
| PkrI | GCNGC | 3 cut(s) | 229, 742, 899 |
| PleI | GAGTC | 2 cut(s) | 222, 521 |
| PpsI | GAGTC | 2 cut(s) | 222, 521 |
| PsuI | RGATCY | 1 cut(s) | 803 |
| RsaI | GTAC | 1 cut(s) | 845 |
| RsaNI | GTAC | 1 cut(s) | 844 |
| SatI | GCNGC | 3 cut(s) | 228, 741, 898 |
| Sau3AI | GATC | 2 cut(s) | 59, 803 |
| SchI | GAGTC | 2 cut(s) | 223, 521 |
| ScrFI | CCNGG | 1 cut(s) | 562 |
| SetI | ASST | 8 cut(s) | 101, 329, 657, 724, 731, 801, 881, 899 |
| SfaNI | GCATC | 2 cut(s) | 214, 566 |
| SmlI | CTYRAG | 2 cut(s) | 506, 665 |
| SmoI | CTYRAG | 2 cut(s) | 506, 665 |
| SsiI | CCGC | 1 cut(s) | 205 |
| StyD4I | CCNGG | 1 cut(s) | 560 |
| TaaI | ACNGT | 1 cut(s) | 472 |
| TatI | WGTACW | 1 cut(s) | 843 |
| TfiI | GAWTC | 1 cut(s) | 49 |
| TscAI | CASTG | 3 cut(s) | 144, 477, 931 |
| TseI | GCWGC | 3 cut(s) | 227, 740, 897 |
| TspDTI | ATGAA | 7 cut(s) | 168, 478, 820, 871, 945, 972, 986 |
| TspRI | CASTG | 3 cut(s) | 144, 477, 931 |
| XmnI | GAANNNNTTC | 1 cut(s) | 694 |