RLG00000006847

Cell wall vacuolar inhibitor of fructosidase 1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
11055872 .. 11059192
3321 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006847

Sequence Viewer

Length: 1269 bp
ATGGATCTGCAGCTGAGATCCAAGAGTGGGAGCGAGGGAGAGGATCATGGTCGTGAAGAGCGCAGGTGTTGTGGTAATAAAGAGAAGGAAGAGAGAGGTGTTGGTGTTGGTGGTGATGGTGACGCAGACTTGGATCGGAAGCGACTCAACAGAGCAGAGTTGCTGCACCAGTTGGTGGTTGTGGAGATTGGTGTGCGAACCATTTTCAACGACGACGGTTTAAATCAGCGACAGCTCTCATCGACTCCTTCATCATCATCATCATTTGTTTGCTTTTTCTGGGATTCGATGATTGGGAACAACGGCGCACCGACTGAGAGACGACCCGGCCCTCGCCTTTTCTATTTGTCTTTGCTTCTGTTTTGGTGCAGGGTTTACTTACCAACGGATGCCAGTCTCATTGGTCAGACATGCCTTCAAACCCCGAAACCCGATCTTTGTGTCTCTTCCCTTGAATCGGTCCCTGAGAGCTCCAATGCAGACATCAAAGGCTTAGCTCTCATAATGTCCGACGAAGTACTCAAGGGCAAAGCACAGGATGCTGTGAAAGAAATCAACAAGCTGATTAAGCGGACACCTATATCGAGTAACAAAGCCTTACTTGCATGCGCAGACTACTATGGCACGATCATAGAATTTCATATCGAAAAACAAGCGCATGATGGAATTACTGGGAATCAGCCTAGGAATGCCGCACAGCAAGCCATGGATGATACCGTCTATTTGGTCAATGAATGTAACAATGGTTTGGGTTTTTCACCTAGCTCTCCTCTAACAGTTATGAGCGCAAGTGTGGCAGATATTGCGACCATTACTAAAGCAATAGTGCAGATACTGTCTACATACAATGATGAAAAAAGAGCATCATATTGCCGCGTTTTCTTGTTGAATGATCTCAGCCTCCTTGAGCAAACATGCAACAAAACACCACACTACAATCTTTGTGTCTCTGCTCTTACCTCGGTCCCTGAGAGTGCCGATGCAAATGTCAAAGGTTTAGCCCTCATAATGGCAAATGTTATACTTAGGATCGCTGCAAATGATACTCTAAACCAAATCGAGGAGATGCTAGCGCACAACTCAGAAGACAAACTCTTAAACGACTGTGTAAGAAATTACATAGCAATCATACAACTTGACATTGAAATCAGCAAGAAATCCATTACTAGTTGGGACTATAAGTCGACAGAGCAAAGCATGAATGATGCTATTTCTCAAGCTAATTCATGCGAATGGGGTTTTCCAGGCAGATCTCCTCTGATATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

423

Amino Acids

46.48

Weight (kDa)

5.12

Isoelectric Point (pI)

51.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMEI PF04043 133 - 251 3.1e-12 Plant invertase/pectin methylesterase inhibitor
PMEI PF04043 301 - 417 2.5e-16 Plant invertase/pectin methylesterase inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 54
Acc16I TGCGCA 1 cut(s) 610
Acc36I ACCTGC 1 cut(s) 54
AccB7I CCANNNNNTGG 1 cut(s) 175
AccI GTMKAC 2 cut(s) 839, 1184
AccII CGCG 1 cut(s) 876
AciI CCGC 3 cut(s) 571, 693, 874
AclWI GGATC 5 cut(s) 12, 12, 51, 141, 1037
AcsI RAATTY 1 cut(s) 635
AfaI GTAC 1 cut(s) 519
AfiI CCNNNNNNNGG 5 cut(s) 27, 175, 457, 1009, 1060
AgsI TTSAA 5 cut(s) 208, 419, 455, 889, 1145
AhdI GACNNNNNGTC 1 cut(s) 1180
AhlI ACTAGT 1 cut(s) 1166
AjnI CCWGG 1 cut(s) 1243
AluBI AGCT 7 cut(s) 13, 235, 471, 497, 562, 765, 1220
AluI AGCT 7 cut(s) 13, 235, 471, 497, 562, 765, 1220
Alw21I GWGCWC 1 cut(s) 473
Alw26I GTCTC 4 cut(s) 313, 401, 448, 952
AlwI GGATC 5 cut(s) 12, 12, 51, 141, 1037
AlwNI CAGNNNCTG 1 cut(s) 835
AoxI GGCC 1 cut(s) 328
ApeKI GCWGC 3 cut(s) 10, 163, 1034
ApoI RAATTY 1 cut(s) 635
AspA2I CCTAGG 1 cut(s) 683
AspLEI GCGC 6 cut(s) 63, 308, 611, 658, 788, 1075
AspS9I GGNCC 3 cut(s) 329, 460, 964
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 3 cut(s) 125, 131, 750
AsuNHI GCTAGC 1 cut(s) 1069
AvaII GGWCC 2 cut(s) 460, 964
AvrII CCTAGG 1 cut(s) 683
BanII GRGCYC 1 cut(s) 473
BbsI GAAGAC 1 cut(s) 1092
Bbv12I GWGCWC 1 cut(s) 473
BbvI GCAGC 3 cut(s) 22, 150, 1021
BccI CCATC 2 cut(s) 110, 656
BceAI ACGGC 1 cut(s) 319
BciT130I CCWGG 1 cut(s) 1245
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 4 cut(s) 313, 401, 448, 952
BcuI ACTAGT 1 cut(s) 1166
BfaI CTAG 4 cut(s) 684, 762, 1070, 1167
BfmI CTRYAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 54
BglII AGATCT 1 cut(s) 1250
BisI GCNGC 5 cut(s) 11, 164, 693, 874, 1035
BlnI CCTAGG 1 cut(s) 683
BlpI GCTNAGC 1 cut(s) 493
BlsI GCNGC 5 cut(s) 12, 165, 694, 875, 1036
BmcAI AGTACT 1 cut(s) 519
Bme1390I CCNGG 2 cut(s) 327, 1245
Bme18I GGWCC 2 cut(s) 460, 964
BmeRI GACNNNNNGTC 1 cut(s) 1180
BmgT120I GGNCC 3 cut(s) 329, 460, 964
BmiI GGNNCC 2 cut(s) 462, 966
BmrFI CCNGG 2 cut(s) 327, 1245
BmrI ACTGGG 1 cut(s) 681
BmsI GCATC 6 cut(s) 379, 529, 872, 970, 1056, 1195
BmtI GCTAGC 1 cut(s) 1073
BmuI ACTGGG 1 cut(s) 681
BpiI GAAGAC 1 cut(s) 1092
Bpu1102I GCTNAGC 1 cut(s) 493
BpuEI CTTGAG 3 cut(s) 506, 926, 1200
BpuMI CCSGG 1 cut(s) 327
BsaJI CCNNGG 3 cut(s) 683, 705, 960
Bsc4I CCNNNNNNNGG 5 cut(s) 27, 175, 457, 1009, 1060
Bse1I ACTGG 3 cut(s) 169, 393, 676
BseBI CCWGG 1 cut(s) 1245
BseDI CCNNGG 3 cut(s) 683, 705, 960
BseGI GGATG 3 cut(s) 394, 544, 715
BseLI CCNNNNNNNGG 5 cut(s) 27, 175, 457, 1009, 1060
BseMII CTCAG 6 cut(s) 5, 306, 456, 910, 960, 1095
BseNI ACTGG 3 cut(s) 169, 393, 676
BseRI GAGGAG 3 cut(s) 759, 1076, 1245
BseXI GCAGC 3 cut(s) 22, 150, 1021
BsgI GTGCAG 3 cut(s) 149, 388, 848
Bsh1236I CGCG 1 cut(s) 876
BshFI GGCC 1 cut(s) 330
BsiHKAI GWGCWC 1 cut(s) 473
BsiSI CCGG 1 cut(s) 327
BslFI GGGAC 3 cut(s) 446, 950, 1187
BslI CCNNNNNNNGG 5 cut(s) 27, 175, 457, 1009, 1060
BsmAI GTCTC 4 cut(s) 313, 401, 448, 952
BsmBI CGTCTC 1 cut(s) 313
BsmFI GGGAC 3 cut(s) 446, 950, 1187
BsmI GAATGC 1 cut(s) 694
BsnI GGCC 1 cut(s) 330
Bsp1286I GDGCHC 1 cut(s) 473
Bsp143I GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
Bsp1720I GCTNAGC 1 cut(s) 493
Bsp19I CCATGG 1 cut(s) 705
BspACI CCGC 3 cut(s) 571, 693, 874
BspANI GGCC 1 cut(s) 330
BspCNI CTCAG 6 cut(s) 6, 307, 457, 909, 961, 1094
BspFNI CGCG 1 cut(s) 876
BspLI GGNNCC 2 cut(s) 462, 966
BspMAI CTGCAG 1 cut(s) 12
BspMI ACCTGC 1 cut(s) 54
BspOI GCTAGC 1 cut(s) 1073
BspPI GGATC 5 cut(s) 12, 12, 51, 141, 1037
BspQI GCTCTTC 1 cut(s) 51
BsrI ACTGG 3 cut(s) 169, 393, 676
BssECI CCNNGG 3 cut(s) 683, 705, 960
BssMI GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
BssT1I CCWWGG 2 cut(s) 683, 705
Bst2UI CCWGG 1 cut(s) 1245
Bst4CI ACNGT 5 cut(s) 218, 718, 778, 837, 1106
Bst6I CTCTTC 3 cut(s) 51, 84, 451
BstAPI GCANNNNNTGC 2 cut(s) 539, 803
BstC8I GCNNGC 3 cut(s) 607, 702, 1071
BstDEI CTNAG 8 cut(s) 14, 315, 465, 493, 896, 969, 1025, 1081
BstDSI CCRYGG 1 cut(s) 705
BstF5I GGATG 3 cut(s) 394, 544, 715
BstFNI CGCG 1 cut(s) 876
BstHHI GCGC 6 cut(s) 63, 308, 611, 658, 788, 1075
BstKTI GATC 9 cut(s) 7, 20, 46, 136, 436, 630, 895, 1032, 1253
BstMAI GTCTC 4 cut(s) 313, 401, 448, 952
BstMBI GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
BstMWI GCNNNNNNNGC 6 cut(s) 539, 568, 602, 701, 794, 803
BstNI CCWGG 1 cut(s) 1245
BstNSI RCATGY 3 cut(s) 414, 609, 918
BstSCI CCNGG 2 cut(s) 325, 1243
BstSFI CTRYAG 1 cut(s) 8
BstUI CGCG 1 cut(s) 876
BstV1I GCAGC 3 cut(s) 22, 150, 1021
BstV2I GAAGAC 1 cut(s) 1092
BstX2I RGATCY 3 cut(s) 4, 17, 1250
BstYI RGATCY 3 cut(s) 4, 17, 1250
BsuRI GGCC 1 cut(s) 330
BtgI CCRYGG 1 cut(s) 705
BtsCI GGATG 3 cut(s) 394, 544, 715
BveI ACCTGC 1 cut(s) 54
Cac8I GCNNGC 3 cut(s) 607, 702, 1071
CaiI CAGNNNCTG 1 cut(s) 835
CfoI GCGC 6 cut(s) 63, 308, 611, 658, 788, 1075
Cfr13I GGNCC 3 cut(s) 329, 460, 964
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 518
CviAII CATG 8 cut(s) 47, 411, 606, 659, 706, 915, 1198, 1227
CviQI GTAC 1 cut(s) 518
DdeI CTNAG 8 cut(s) 14, 315, 465, 493, 896, 969, 1025, 1081
DpnI GATC 9 cut(s) 6, 19, 45, 135, 435, 629, 894, 1031, 1252
DpnII GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
DraI TTTAAA 1 cut(s) 222
DriI GACNNNNNGTC 1 cut(s) 1180
Eam1104I CTCTTC 3 cut(s) 51, 84, 451
Eam1105I GACNNNNNGTC 1 cut(s) 1180
EarI CTCTTC 3 cut(s) 51, 84, 451
Ecl136II GAGCTC 1 cut(s) 471
Eco130I CCWWGG 2 cut(s) 683, 705
Eco24I GRGCYC 1 cut(s) 473
Eco47I GGWCC 2 cut(s) 460, 964
Eco53kI GAGCTC 1 cut(s) 471
EcoICRI GAGCTC 1 cut(s) 471
EcoRII CCWGG 1 cut(s) 1243
EcoT14I CCWWGG 2 cut(s) 683, 705
EcoT38I GRGCYC 1 cut(s) 473
ErhI CCWWGG 2 cut(s) 683, 705
Esp3I CGTCTC 1 cut(s) 313
FaeI CATG 8 cut(s) 50, 414, 609, 662, 709, 918, 1201, 1230
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 3 cut(s) 446, 950, 1187
FatI CATG 8 cut(s) 46, 410, 605, 658, 705, 914, 1197, 1226
FblI GTMKAC 2 cut(s) 839, 1184
Fnu4HI GCNGC 5 cut(s) 11, 164, 693, 874, 1035
FokI GGATG 3 cut(s) 401, 551, 722
FriOI GRGCYC 1 cut(s) 473
Fsp4HI GCNGC 5 cut(s) 11, 164, 693, 874, 1035
FspBI CTAG 4 cut(s) 684, 762, 1070, 1167
FspI TGCGCA 1 cut(s) 610
GlaI GCGC 6 cut(s) 62, 307, 610, 657, 787, 1074
GluI GCNGC 5 cut(s) 11, 164, 693, 874, 1035
HaeIII GGCC 1 cut(s) 330
HapII CCGG 1 cut(s) 327
HgaI GACGC 1 cut(s) 131
HhaI GCGC 6 cut(s) 63, 308, 611, 658, 788, 1075
Hin1II CATG 8 cut(s) 50, 414, 609, 662, 709, 918, 1201, 1230
Hin6I GCGC 6 cut(s) 61, 306, 609, 656, 786, 1073
HinP1I GCGC 6 cut(s) 61, 306, 609, 656, 786, 1073
HincII GTYRAC 1 cut(s) 1185
HindII GTYRAC 1 cut(s) 1185
HinfI GANTC 5 cut(s) 144, 244, 284, 455, 676
HpaII CCGG 1 cut(s) 327
HphI GGTGA 3 cut(s) 125, 131, 750
Hpy166II GTNNAC 3 cut(s) 376, 840, 1185
Hpy188I TCNGA 5 cut(s) 138, 408, 511, 1084, 1260
Hpy188III TCNNGA 1 cut(s) 53
Hpy8I GTNNAC 3 cut(s) 376, 840, 1185
Hpy99I CGWCG 3 cut(s) 215, 218, 515
HpyAV CCTTC 3 cut(s) 79, 258, 425
HpyCH4III ACNGT 5 cut(s) 218, 718, 778, 837, 1106
HpyCH4V TGCA 9 cut(s) 10, 166, 369, 479, 605, 829, 918, 983, 1037
HpyF10VI GCNNNNNNNGC 6 cut(s) 539, 568, 602, 701, 794, 803
HpyF3I CTNAG 8 cut(s) 14, 315, 465, 493, 896, 969, 1025, 1081
Hsp92II CATG 8 cut(s) 50, 414, 609, 662, 709, 918, 1201, 1230
HspAI GCGC 6 cut(s) 61, 306, 609, 656, 786, 1073
Kzo9I GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
LguI GCTCTTC 1 cut(s) 51
LmnI GCTCC 2 cut(s) 30, 476
Lsp1109I GCAGC 3 cut(s) 22, 150, 1021
LweI GCATC 6 cut(s) 379, 529, 872, 970, 1056, 1195
MaeI CTAG 4 cut(s) 684, 762, 1070, 1167
MaeIII GTNAC 3 cut(s) 119, 587, 737
MalI GATC 9 cut(s) 6, 19, 45, 135, 435, 629, 894, 1031, 1252
MboI GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
MboII GAAGA 4 cut(s) 68, 101, 438, 1097
MflI RGATCY 3 cut(s) 4, 17, 1250
MhlI GDGCHC 1 cut(s) 473
MluCI AATT 4 cut(s) 635, 666, 1114, 1222
MlyI GAGTC 2 cut(s) 138, 238
MmeI TCCRAC 1 cut(s) 534
MseI TTAA 3 cut(s) 221, 567, 1097
MslI CAYNNNNRTG 2 cut(s) 51, 1231
MspA1I CMGCKG 1 cut(s) 13
MspI CCGG 1 cut(s) 327
MspR9I CCNGG 2 cut(s) 327, 1245
Mva1269I GAATGC 1 cut(s) 694
MvaI CCWGG 1 cut(s) 1245
MvnI CGCG 1 cut(s) 876
MwoI GCNNNNNNNGC 6 cut(s) 539, 568, 602, 701, 794, 803
NciI CCSGG 1 cut(s) 327
NcoI CCATGG 1 cut(s) 705
NdeII GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
NheI GCTAGC 1 cut(s) 1069
NlaIII CATG 8 cut(s) 50, 414, 609, 662, 709, 918, 1201, 1230
NlaIV GGNNCC 2 cut(s) 462, 966
NmuCI GTSAC 1 cut(s) 119
NsbI TGCGCA 1 cut(s) 610
NspI RCATGY 3 cut(s) 414, 609, 918
PaeI GCATGC 1 cut(s) 609
PaqCI CACCTGC 1 cut(s) 54
PciSI GCTCTTC 1 cut(s) 51
PctI GAATGC 1 cut(s) 694
PfeI GAWTC 3 cut(s) 284, 455, 676
PflMI CCANNNNNTGG 1 cut(s) 175
PkrI GCNGC 5 cut(s) 12, 165, 694, 875, 1036
PleI GAGTC 2 cut(s) 138, 238
PpsI GAGTC 2 cut(s) 138, 238
Psp124BI GAGCTC 1 cut(s) 473
Psp6I CCWGG 1 cut(s) 1243
PspGI CCWGG 1 cut(s) 1243
PspN4I GGNNCC 2 cut(s) 462, 966
PspPI GGNCC 3 cut(s) 329, 460, 964
PstI CTGCAG 1 cut(s) 12
PstNI CAGNNNCTG 1 cut(s) 835
PsuI RGATCY 3 cut(s) 4, 17, 1250
PvuII CAGCTG 1 cut(s) 13
RsaI GTAC 1 cut(s) 519
RsaNI GTAC 1 cut(s) 518
RseI CAYNNNNRTG 2 cut(s) 51, 1231
SacI GAGCTC 1 cut(s) 473
SalI GTCGAC 1 cut(s) 1183
SapI GCTCTTC 1 cut(s) 51
SaqAI TTAA 3 cut(s) 221, 567, 1097
SatI GCNGC 5 cut(s) 11, 164, 693, 874, 1035
Sau3AI GATC 9 cut(s) 4, 17, 43, 133, 433, 627, 892, 1029, 1250
Sau96I GGNCC 3 cut(s) 329, 460, 964
ScaI AGTACT 1 cut(s) 519
SchI GAGTC 2 cut(s) 138, 238
ScrFI CCNGG 2 cut(s) 327, 1245
SduI GDGCHC 1 cut(s) 473
SfaNI GCATC 6 cut(s) 379, 529, 872, 970, 1056, 1195
SfcI CTRYAG 1 cut(s) 8
SinI GGWCC 2 cut(s) 460, 964
SmiMI CAYNNNNRTG 2 cut(s) 51, 1231
SmlI CTYRAG 3 cut(s) 521, 905, 1215
SmoI CTYRAG 3 cut(s) 521, 905, 1215
SpeI ACTAGT 1 cut(s) 1166
SphI GCATGC 1 cut(s) 609
Sse9I AATT 4 cut(s) 635, 666, 1114, 1222
SsiI CCGC 3 cut(s) 571, 693, 874
SspMI CTAG 4 cut(s) 684, 762, 1070, 1167
SstI GAGCTC 1 cut(s) 473
StyD4I CCNGG 2 cut(s) 325, 1243
StyI CCWWGG 2 cut(s) 683, 705
TaaI ACNGT 5 cut(s) 218, 718, 778, 837, 1106
TaqI TCGA 6 cut(s) 242, 287, 584, 645, 1059, 1184
TaqII GACCGA 2 cut(s) 448, 952
TasI AATT 4 cut(s) 635, 666, 1114, 1222
TatI WGTACW 1 cut(s) 517
TauI GCSGC 2 cut(s) 695, 876
TfiI GAWTC 3 cut(s) 284, 455, 676
Tru1I TTAA 3 cut(s) 221, 567, 1097
Tru9I TTAA 3 cut(s) 221, 567, 1097
TseFI GTSAC 1 cut(s) 119
TseI GCWGC 3 cut(s) 10, 163, 1034
Tsp45I GTSAC 1 cut(s) 119
TspDTI ATGAA 6 cut(s) 240, 629, 747, 867, 1214, 1215
TspGWI ACGGA 1 cut(s) 401
Van91I CCANNNNNTGG 1 cut(s) 175
VpaK11BI GGWCC 2 cut(s) 460, 964
XapI RAATTY 1 cut(s) 635
XceI RCATGY 3 cut(s) 414, 609, 918
XmaJI CCTAGG 1 cut(s) 683
XmiI GTMKAC 2 cut(s) 839, 1184
XspI CTAG 4 cut(s) 684, 762, 1070, 1167
ZrmI AGTACT 1 cut(s) 519
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.