Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004074

Physical Location & Seq

Genomic Coordinates Reverse (-)

54777613 .. 54782613

Gene Structure 5001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009573

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGAGGTCTTCGCTACCTCTGCAACTCCTTCTTCCTGCCCTCATTTCCTCATTTCAAATTTTCACAGTAACCCTAAATCTCCCTCTATCAAAACCACTCCTCAGGTGTTGAAATGGAAATGTCTGCCACTAGGGGTTGTAGAAGCTCGAGCAAAGTTTTCTTTAATGTGTGCAAGGCCGAGATCCATCAAGAGACTGATAAGTTATGGTGGTGCTGATGGGTCCTCGAAACAAGATTTATTGCTTGGACCAATACGGAGGTTTAATCGAAGTTTTGTTTCTCAGTTTGGTTTGTTTTCCGCGAGTTATAGTAAGCTCAAGGAAAAGCTTAAATTGAGGAGACGTGCCGGGAGTCTTTATAAAGTGATAAACTGTCCTGAAAAATTTAGGCAGCATGTTTTTGTTCGATTTGTTGTTGGAGTGATGGTTGTCATGTCAGTTTCTGTTTCAGTTAACAAGGTTCCATCATGGGCTCTTACTGAAGAGAATCTTCTGTTCTTAGAGGCATGGAGGATGATTGACCGTGCATATGTTGATAAAAGTTTCAATGGACAAAGTTGGTTTCGGTACAGAGAGAATGCACTGCGCAGTGAACCAATGAACAACCGAGAAGAGACATATACGGCAATAAAAAAGATGCTTGCCACATTGGAAGATCCTTTCACTCGATTTCTGGAGCCGGAAAAGTTCAAGAGTCTACGGTCTGGTACTCAAGGCGCTCTTACAGGCGTAGGGCTGTCAATTGGCTACTCTACAAAAATTGATGGATCATCAGCTGGTCTAGTTGTTATTTCAGCTGCTCCAGGAGGTCCAGCAAACAGAGCTGGCATCTTGTCTGGGGATGTCATTTTGGCAATTGATGATACAAGTACTGAAACGATGGGCATATATGATGCAGCAGAGCGGTTACAGGGATCTGAAGGAAGTTCAGTAAAACTAACTGTTCTTAGTGGACCTGAAATCAAGCACTTAGATTTAATGCGGGAGAAAGTCTCGCTGAATCCGGTGAAGTCGAGACTATGTGTAGTGCCGCATTCAGGCAAGGATTCCCCTAGGATTGGCTATATCAAGCTAACAACGTTCAATCAAAATGCATCAGGTGCTGTGAAGGAAGCAATTAAAACTTTAAGGGATAATAATGTTAATGCCTTTGTATTGGACCTTCGAGACAATAGTGGTGGTCTTTTCCCAGAAGGAATTGAGATTGCCAAGATTTGGTTGGACAAAGGCGTGATTGTATATATTTGTGATAGTCGTGGTGTACGAGATATATATGACACTGATGGAAGCCAAGCAGTAGCTACTAAAGAGCCGCTAGCTGTGCTGGTGAACAAGGGTACTGCCAGTGCAAGTGAAATATTAGCCGGGGCGCTGAAAGACAATAAACGTGCTGTGTTGTTTGGAGAACCTACATTTGGGAAAGGGAAGATTCAGTCAGTTTTTGAACTGTCTGATGGTTCTGGCTTGGCTGTTACTATTGCTCGTTATGAGACTCCTGCTCACACAGACATAGACAAGGTTGGTGTGATTCCAGACCATCCTTTGCCAACCTCATTTCCGAATGACGAGGAGGGTTTCTGTAAGTGCCTCCAGGACCCAGCCTCCGCTTGCAACAAGGTGGAACTATTTGCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009579 GO:0016787 GO:0019538 GO:0031977 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044436 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PDZ PDZ_2 Peptidase_S41

Protein Analysis

546

Amino Acids

59.57

Weight (kDa)

9.22

Isoelectric Point (pI)

39.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDZ	PF00595	249 - 316	3.1e-09	PDZ domain
PDZ_2	PF13180	257 - 324	5.7e-07	PDZ domain
PDZ_6	PF17820	262 - 315	2.4e-12	PDZ domain
Peptidase_S41	PF03572	352 - 513	1.4e-54	Peptidase family S41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004074)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17740 AT4G17740
fragaria_vesca	FvH4_4g05180 FvH4_4g05180 FvH4_4g05180 FvH4_4g05180 FvH4_4g05180 FvH4_4g05180 FvH4_4g05180 FvH4_4g05180 FvH4_4g05180
malus_domestica	MD13G1225700.v1.1 MD16G1230600.v1.1
prunus_persica	Prupe.1G052500_v2.0.a1 Prupe.1G052500_v2.0.a1 Prupe.1G052500_v2.0.a1 Prupe.1G052500_v2.0.a1 Prupe.1G052500_v2.0.a1 Prupe.1G052500_v2.0.a1
pyrus_communis	pycom13g19890 pycom16g19260
rosa_chinensis	RchiOBHm_Chr4g0396091
rosa_laevigata	RLG00000009573
rosa_multiflora	Rmu_sc0006325.1_g000018 Rmu_sc0007010.1_g000014 Rmu_sc0009634.1_g000011
rosa_roxburghii	Rroxscaffold_5G00340890
rosa_rugosa	Rorug03G0352600 Rorug03G0352600
rosa_samantha	Rh4BG064100 Rh4CG070700 Rh4DG061100
rosa_wichuraiana	Rw4G005320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	360
Acc16I	TGCGCA	1 cut(s)	587
AccB7I	CCANNNNNTGG	1 cut(s)	1215
AccBSI	CCGCTC	1 cut(s)	904
AccI	GTMKAC	1 cut(s)	697
AccII	CGCG	1 cut(s)	302
AciI	CCGC	6 cut(s)	300, 904, 982, 1031, 1313, 1605
AclI	AACGTT	1 cut(s)	1079
AclWI	GGATC	4 cut(s)	177, 650, 775, 922
AcsI	RAATTY	2 cut(s)	58, 383
AcuI	CTGAAG	2 cut(s)	501, 939
AfaI	GTAC	5 cut(s)	569, 709, 871, 1263, 1339
AfiI	CCNNNNNNNGG	4 cut(s)	1037, 1058, 1215, 1415
AgsI	TTSAA	6 cut(s)	57, 112, 547, 691, 1084, 1445
AjiI	CACGTC	1 cut(s)	344
AjnI	CCWGG	2 cut(s)	802, 1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	1398, 1430
AluBI	AGCT	9 cut(s)	146, 316, 328, 776, 797, 824, 1072, 1301, 1319
AluI	AGCT	9 cut(s)	146, 316, 328, 776, 797, 824, 1072, 1301, 1319
Alw26I	GTCTC	7 cut(s)	187, 334, 608, 997, 1009, 1161, 1484
AlwI	GGATC	4 cut(s)	177, 650, 775, 922
AlwNI	CAGNNNCTG	2 cut(s)	443, 1103
Ama87I	CYCGRG	1 cut(s)	147
AoxI	GGCC	1 cut(s)	176
ApeKI	GCWGC	3 cut(s)	391, 797, 896
ApoI	RAATTY	2 cut(s)	58, 383
AspA2I	CCTAGG	1 cut(s)	1052
AspLEI	GCGC	3 cut(s)	588, 719, 1372
AspS9I	GGNCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
AsuC2I	CCSGG	2 cut(s)	349, 1366
AsuHPI	GGTGA	2 cut(s)	1018, 1339
AsuNHI	GCTAGC	1 cut(s)	1315
AvaI	CYCGRG	1 cut(s)	147
AvaII	GGWCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
AvrII	CCTAGG	1 cut(s)	1052
AxyI	CCTNAGG	1 cut(s)	102
BanII	GRGCYC	1 cut(s)	475
BarI	GAAGNNNNNNTAC	2 cut(s)	1146, 1178
BbvI	GCAGC	3 cut(s)	403, 784, 908
BccI	CCATC	9 cut(s)	194, 212, 418, 472, 758, 874, 1277, 1448, 1545
BceAI	ACGGC	1 cut(s)	639
BciT130I	CCWGG	2 cut(s)	804, 1592
BcnI	CCSGG	2 cut(s)	349, 1366
BcoDI	GTCTC	7 cut(s)	187, 334, 608, 997, 1009, 1161, 1484
BfaI	CTAG	4 cut(s)	131, 782, 1053, 1316
BfoI	RGCGCY	2 cut(s)	720, 1373
BisI	GCNGC	5 cut(s)	392, 798, 897, 1031, 1313
BlnI	CCTAGG	1 cut(s)	1052
BlsI	GCNGC	5 cut(s)	393, 799, 898, 1032, 1314
BmcAI	AGTACT	1 cut(s)	871
Bme1390I	CCNGG	4 cut(s)	349, 804, 1366, 1592
Bme18I	GGWCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
BmeT110I	CYCGRG	1 cut(s)	147
BmgBI	CACGTC	1 cut(s)	344
BmgT120I	GGNCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
BmiI	GGNNCC	4 cut(s)	223, 462, 678, 1596
BmrFI	CCNGG	4 cut(s)	349, 804, 1366, 1592
BmsI	GCATC	4 cut(s)	627, 837, 883, 1103
BmtI	GCTAGC	1 cut(s)	1319
BplI	GAGNNNNNCTC	2 cut(s)	977, 1009
BpmI	CTGGAG	3 cut(s)	695, 786, 1574
BpuEI	CTTGAG	2 cut(s)	302, 696
BpuMI	CCSGG	2 cut(s)	349, 1366
BsaJI	CCNNGG	2 cut(s)	1052, 1365
BsaWI	WCCGGW	1 cut(s)	1003
BsaXI	ACNNNNNCTCC	4 cut(s)	411, 441, 1586, 1616
Bsc4I	CCNNNNNNNGG	4 cut(s)	1037, 1058, 1215, 1415
Bse1I	ACTGG	1 cut(s)	1344
Bse21I	CCTNAGG	1 cut(s)	102
BseBI	CCWGG	2 cut(s)	804, 1592
BseDI	CCNNGG	2 cut(s)	1052, 1365
BseGI	GGATG	3 cut(s)	519, 847, 1537
BseLI	CCNNNNNNNGG	4 cut(s)	1037, 1058, 1215, 1415
BseMII	CTCAG	2 cut(s)	116, 296
BseNI	ACTGG	1 cut(s)	1344
BseRI	GAGGAG	3 cut(s)	90, 352, 1583
BseXI	GCAGC	3 cut(s)	403, 784, 908
BseYI	CCCAGC	1 cut(s)	1597
Bsh1236I	CGCG	1 cut(s)	302
BshFI	GGCC	1 cut(s)	178
BsiHKCI	CYCGRG	1 cut(s)	147
BsiSI	CCGG	4 cut(s)	348, 680, 1004, 1365
BslI	CCNNNNNNNGG	4 cut(s)	1037, 1058, 1215, 1415
BsmAI	GTCTC	7 cut(s)	187, 334, 608, 997, 1009, 1161, 1484
BsmBI	CGTCTC	1 cut(s)	334
BsmI	GAATGC	2 cut(s)	583, 1033
BsnI	GGCC	1 cut(s)	178
BsoBI	CYCGRG	1 cut(s)	147
Bsp1286I	GDGCHC	1 cut(s)	475
Bsp143I	GATC	4 cut(s)	182, 655, 767, 914
BspACI	CCGC	6 cut(s)	300, 904, 982, 1031, 1313, 1605
BspANI	GGCC	1 cut(s)	178
BspCNI	CTCAG	2 cut(s)	115, 295
BspFNI	CGCG	1 cut(s)	302
BspLI	GGNNCC	4 cut(s)	223, 462, 678, 1596
BspOI	GCTAGC	1 cut(s)	1319
BspPI	GGATC	4 cut(s)	177, 650, 775, 922
BsrBI	CCGCTC	1 cut(s)	904
BsrI	ACTGG	1 cut(s)	1344
BssECI	CCNNGG	2 cut(s)	1052, 1365
BssMI	GATC	4 cut(s)	182, 655, 767, 914
BssT1I	CCWWGG	1 cut(s)	1052
Bst2UI	CCWGG	2 cut(s)	804, 1592
Bst4CI	ACNGT	6 cut(s)	68, 374, 524, 702, 943, 1449
Bst6I	CTCTTC	2 cut(s)	477, 606
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstC8I	GCNNGC	4 cut(s)	642, 826, 1317, 1609
BstDEI	CTNAG	5 cut(s)	102, 282, 499, 947, 970
BstF5I	GGATG	3 cut(s)	519, 847, 1537
BstFNI	CGCG	1 cut(s)	302
BstH2I	RGCGCY	2 cut(s)	720, 1373
BstHHI	GCGC	3 cut(s)	588, 719, 1372
BstKTI	GATC	4 cut(s)	185, 658, 770, 917
BstMAI	GTCTC	7 cut(s)	187, 334, 608, 997, 1009, 1161, 1484
BstMBI	GATC	4 cut(s)	182, 655, 767, 914
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 821, 1100, 1321
BstNI	CCWGG	2 cut(s)	804, 1592
BstNSI	RCATGY	1 cut(s)	398
BstSCI	CCNGG	4 cut(s)	347, 802, 1364, 1590
BstUI	CGCG	1 cut(s)	302
BstV1I	GCAGC	3 cut(s)	403, 784, 908
BstX2I	RGATCY	3 cut(s)	182, 655, 914
BstYI	RGATCY	3 cut(s)	182, 655, 914
Bsu36I	CCTNAGG	1 cut(s)	102
BsuRI	GGCC	1 cut(s)	178
BtrI	CACGTC	1 cut(s)	344
BtsCI	GGATG	3 cut(s)	519, 847, 1537
BtsI	GCAGTG	2 cut(s)	581, 595
BtsIMutI	CAGTG	4 cut(s)	581, 595, 1278, 1351
Cac8I	GCNNGC	4 cut(s)	642, 826, 1317, 1609
CaiI	CAGNNNCTG	2 cut(s)	443, 1103
CfoI	GCGC	3 cut(s)	588, 719, 1372
Cfr13I	GGNCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
Csp6I	GTAC	5 cut(s)	568, 708, 870, 1262, 1338
CspCI	CAANNNNNGTGG	2 cut(s)	1159, 1194
CviAII	CATG	4 cut(s)	395, 433, 468, 507
CviQI	GTAC	5 cut(s)	568, 708, 870, 1262, 1338
DdeI	CTNAG	5 cut(s)	102, 282, 499, 947, 970
DpnI	GATC	4 cut(s)	184, 657, 769, 916
DpnII	GATC	4 cut(s)	182, 655, 767, 914
Eam1104I	CTCTTC	2 cut(s)	477, 606
EarI	CTCTTC	2 cut(s)	477, 606
Eco130I	CCWWGG	1 cut(s)	1052
Eco24I	GRGCYC	1 cut(s)	475
Eco47I	GGWCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
Eco57I	CTGAAG	2 cut(s)	501, 939
Eco81I	CCTNAGG	1 cut(s)	102
Eco88I	CYCGRG	1 cut(s)	147
EcoO109I	RGGNCCY	2 cut(s)	222, 1594
EcoRII	CCWGG	2 cut(s)	802, 1590
EcoT14I	CCWWGG	1 cut(s)	1052
EcoT22I	ATGCAT	1 cut(s)	1096
EcoT38I	GRGCYC	1 cut(s)	475
ErhI	CCWWGG	1 cut(s)	1052
Esp3I	CGTCTC	1 cut(s)	334
FaeI	CATG	4 cut(s)	398, 436, 471, 510
FalI	AAGNNNNNCTT	4 cut(s)	474, 506, 705, 737
FatI	CATG	4 cut(s)	394, 432, 467, 506
FauI	CCCGC	1 cut(s)	975
FauNDI	CATATG	1 cut(s)	529
FblI	GTMKAC	1 cut(s)	697
Fnu4HI	GCNGC	5 cut(s)	392, 798, 897, 1031, 1313
FokI	GGATG	3 cut(s)	526, 854, 1524
FriOI	GRGCYC	1 cut(s)	475
Fsp4HI	GCNGC	5 cut(s)	392, 798, 897, 1031, 1313
FspBI	CTAG	4 cut(s)	131, 782, 1053, 1316
FspI	TGCGCA	1 cut(s)	587
GlaI	GCGC	3 cut(s)	587, 718, 1371
GluI	GCNGC	5 cut(s)	392, 798, 897, 1031, 1313
GsaI	CCCAGC	1 cut(s)	1601
GsuI	CTGGAG	3 cut(s)	695, 786, 1574
HaeII	RGCGCY	2 cut(s)	720, 1373
HaeIII	GGCC	1 cut(s)	178
HapII	CCGG	4 cut(s)	348, 680, 1004, 1365
HhaI	GCGC	3 cut(s)	588, 719, 1372
Hin1II	CATG	4 cut(s)	398, 436, 471, 510
Hin6I	GCGC	3 cut(s)	586, 717, 1370
HinP1I	GCGC	3 cut(s)	586, 717, 1370
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	1 cut(s)	326
HinfI	GANTC	8 cut(s)	352, 487, 694, 1000, 1046, 1429, 1492, 1528
HpaI	GTTAAC	1 cut(s)	454
HpaII	CCGG	4 cut(s)	348, 680, 1004, 1365
HphI	GGTGA	2 cut(s)	1018, 1339
Hpy166II	GTNNAC	6 cut(s)	454, 593, 698, 953, 1262, 1330
Hpy188I	TCNGA	3 cut(s)	919, 1453, 1560
Hpy188III	TCNNGA	7 cut(s)	190, 377, 674, 691, 1014, 1166, 1532
Hpy8I	GTNNAC	6 cut(s)	454, 593, 698, 953, 1262, 1330
HpyAV	CCTTC	5 cut(s)	39, 914, 1102, 1172, 1187
HpyCH4III	ACNGT	6 cut(s)	68, 374, 524, 702, 943, 1449
HpyCH4IV	ACGT	3 cut(s)	343, 1079, 1387
HpyCH4V	TGCA	9 cut(s)	23, 173, 527, 581, 896, 1094, 1349, 1611, 1631
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 821, 1100, 1321
HpyF3I	CTNAG	5 cut(s)	102, 282, 499, 947, 970
HpySE526I	ACGT	3 cut(s)	343, 1079, 1387
Hsp92II	CATG	4 cut(s)	398, 436, 471, 510
HspAI	GCGC	3 cut(s)	586, 717, 1370
KspAI	GTTAAC	1 cut(s)	454
Kzo9I	GATC	4 cut(s)	182, 655, 767, 914
LmnI	GCTCC	2 cut(s)	676, 805
Lsp1109I	GCAGC	3 cut(s)	403, 784, 908
LweI	GCATC	4 cut(s)	627, 837, 883, 1103
MaeI	CTAG	4 cut(s)	131, 782, 1053, 1316
MaeII	ACGT	3 cut(s)	343, 1079, 1387
MaeIII	GTNAC	3 cut(s)	68, 906, 1471
MalI	GATC	4 cut(s)	184, 657, 769, 916
MbiI	CCGCTC	1 cut(s)	904
MboI	GATC	4 cut(s)	182, 655, 767, 914
MboII	GAAGA	6 cut(s)	24, 482, 494, 623, 665, 1438
MfeI	CAATTG	2 cut(s)	741, 855
MflI	RGATCY	3 cut(s)	182, 655, 914
MhlI	GDGCHC	1 cut(s)	475
MluCI	AATT	8 cut(s)	58, 332, 383, 741, 759, 855, 1116, 1197
MlyI	GAGTC	3 cut(s)	361, 703, 1486
MmeI	TCCRAC	2 cut(s)	397, 1200
Mph1103I	ATGCAT	1 cut(s)	1096
MseI	TTAA	8 cut(s)	164, 264, 330, 453, 977, 1119, 1127, 1143
MspA1I	CMGCKG	2 cut(s)	776, 797
MspI	CCGG	4 cut(s)	348, 680, 1004, 1365
MspR9I	CCNGG	4 cut(s)	349, 804, 1366, 1592
MunI	CAATTG	2 cut(s)	741, 855
Mva1269I	GAATGC	2 cut(s)	583, 1033
MvaI	CCWGG	2 cut(s)	804, 1592
MvnI	CGCG	1 cut(s)	302
MwoI	GCNNNNNNNGC	4 cut(s)	20, 821, 1100, 1321
NciI	CCSGG	2 cut(s)	349, 1366
NdeI	CATATG	1 cut(s)	529
NdeII	GATC	4 cut(s)	182, 655, 767, 914
NheI	GCTAGC	1 cut(s)	1315
NlaIII	CATG	4 cut(s)	398, 436, 471, 510
NlaIV	GGNNCC	4 cut(s)	223, 462, 678, 1596
NmeAIII	GCCGAG	1 cut(s)	204
NsbI	TGCGCA	1 cut(s)	587
NsiI	ATGCAT	1 cut(s)	1096
NspI	RCATGY	1 cut(s)	398
PaeR7I	CTCGAG	1 cut(s)	147
PcsI	WCGNNNNNNNCGW	1 cut(s)	1261
PctI	GAATGC	2 cut(s)	583, 1033
PfeI	GAWTC	5 cut(s)	487, 1000, 1046, 1429, 1528
PflMI	CCANNNNNTGG	1 cut(s)	1215
PfoI	TCCNGGA	2 cut(s)	802, 1590
PkrI	GCNGC	5 cut(s)	393, 799, 898, 1032, 1314
PleI	GAGTC	3 cut(s)	360, 702, 1486
PpsI	GAGTC	3 cut(s)	360, 702, 1486
PpuMI	RGGWCCY	2 cut(s)	222, 1594
PsiI	TTATAA	1 cut(s)	360
Psp1406I	AACGTT	1 cut(s)	1079
Psp5II	RGGWCCY	2 cut(s)	222, 1594
Psp6I	CCWGG	2 cut(s)	802, 1590
PspFI	CCCAGC	1 cut(s)	1597
PspGI	CCWGG	2 cut(s)	802, 1590
PspN4I	GGNNCC	4 cut(s)	223, 462, 678, 1596
PspPI	GGNCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
PspPPI	RGGWCCY	2 cut(s)	222, 1594
PspXI	VCTCGAGB	1 cut(s)	147
PstNI	CAGNNNCTG	2 cut(s)	443, 1103
PsuI	RGATCY	3 cut(s)	182, 655, 914
PvuII	CAGCTG	2 cut(s)	776, 797
RsaI	GTAC	5 cut(s)	569, 709, 871, 1263, 1339
RsaNI	GTAC	5 cut(s)	568, 708, 870, 1262, 1338
SaqAI	TTAA	8 cut(s)	164, 264, 330, 453, 977, 1119, 1127, 1143
SatI	GCNGC	5 cut(s)	392, 798, 897, 1031, 1313
Sau3AI	GATC	4 cut(s)	182, 655, 767, 914
Sau96I	GGNCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
ScaI	AGTACT	1 cut(s)	871
SchI	GAGTC	3 cut(s)	361, 703, 1486
ScrFI	CCNGG	4 cut(s)	349, 804, 1366, 1592
SduI	GDGCHC	1 cut(s)	475
SfaNI	GCATC	4 cut(s)	627, 837, 883, 1103
Sfr274I	CTCGAG	1 cut(s)	147
SinI	GGWCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
SlaI	CTCGAG	1 cut(s)	147
SmlI	CTYRAG	3 cut(s)	147, 317, 711
SmoI	CTYRAG	3 cut(s)	147, 317, 711
Sse9I	AATT	8 cut(s)	58, 332, 383, 741, 759, 855, 1116, 1197
SsiI	CCGC	6 cut(s)	300, 904, 982, 1031, 1313, 1605
SspI	AATATT	1 cut(s)	1359
SspMI	CTAG	4 cut(s)	131, 782, 1053, 1316
StyD4I	CCNGG	4 cut(s)	347, 802, 1364, 1590
StyI	CCWWGG	1 cut(s)	1052
TaaI	ACNGT	6 cut(s)	68, 374, 524, 702, 943, 1449
TaiI	ACGT	3 cut(s)	346, 1082, 1390
TaqI	TCGA	7 cut(s)	148, 227, 268, 406, 667, 1013, 1165
TasI	AATT	8 cut(s)	58, 332, 383, 741, 759, 855, 1116, 1197
TatI	WGTACW	1 cut(s)	869
TauI	GCSGC	2 cut(s)	1033, 1315
TfiI	GAWTC	5 cut(s)	487, 1000, 1046, 1429, 1528
Tru1I	TTAA	8 cut(s)	164, 264, 330, 453, 977, 1119, 1127, 1143
Tru9I	TTAA	8 cut(s)	164, 264, 330, 453, 977, 1119, 1127, 1143
TscAI	CASTG	4 cut(s)	588, 595, 1285, 1351
TseI	GCWGC	3 cut(s)	391, 797, 896
TspDTI	ATGAA	1 cut(s)	614
TspGWI	ACGGA	1 cut(s)	271
TspRI	CASTG	4 cut(s)	588, 595, 1285, 1351
Van91I	CCANNNNNTGG	1 cut(s)	1215
VpaK11BI	GGWCC	6 cut(s)	222, 248, 809, 953, 1159, 1594
XapI	RAATTY	2 cut(s)	58, 383
XceI	RCATGY	1 cut(s)	398
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1216
XhoI	CTCGAG	1 cut(s)	147
XmaJI	CCTAGG	1 cut(s)	1052
XmiI	GTMKAC	1 cut(s)	697
XspI	CTAG	4 cut(s)	131, 782, 1053, 1316
ZrmI	AGTACT	1 cut(s)	871
Zsp2I	ATGCAT	1 cut(s)	1096

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.