Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0015256

Physical Location & Seq

Genomic Coordinates Forward (+)

65033359 .. 65035514

Gene Structure 2156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010274

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCTCTTGGCCCTATTCTTTTGCATCTCCTCCTGATGGGTGGCGGCCTCGGCCTCGGCCTCGGCCTCGGCTGGCTTCAAGCACCCGAGTGCCCTTGGAGTCGGTTCGTGTCTTCTGGCCTTTGTTACATCAAAATCAAAGACTTGGTCTCTAAAGGATTATATGATCAGACCCTTCAACTTTACAAAGACGAGCTCCATTCTTATGGCCCCCTCCACGCAAACACCTCCATCCTTCCTTCAATCATCAAAGCATGCTCCTCCCACCATGGGCATGGGCTTCAACTTCACTGCATGGCTCTCAAGTCAGGCTCCATCTCAGACTCCGTTGTATCCAATTCTCTCATCTCCATGTATGCCAAACTCGCACTCGTTGGAGCAGCACGCCGGGTGTTTGATGAAATGCCTGAAAGAGACACCATCACCTGGAATTCCATGATAAATTGCTACATACAAAATGGGCATCTTGCAAAAGCACTTGATGTGCTTAAACAAATGTATTTGAATGGTTTTACAATGAAAGCGGAGTTGATTGCCAGCATCATATCAGTTTGTGCAAGGACAAGAAAGTTTAGACTAGGGAGACAGATTCATGGCCTCCTTGTTGTCCATGACGAGATTGAAGAGTCGGTGTTCTTGTCAACGGCTCTGCTTGATTTGTATATGAGGTGTCACGAAACTTTGATGGCCTTCCATGTTTTCTGTCACATGCAAGTGAAAAATGAAGTCTCTTGGACTGCCATGATTTCGGGATGCATTGCTAATCGCAGCTATGGGATGGCATTGAATTGCTTCCGGGAAATGCAGGTTGAAGGATTGAAACCCAATCGAGTCACTGTGCTTGCCATTTTACCAGCTTGTGCCGAGTTGGGAGACATAGGACATGGGAAGGAAATTCATGCCTATACTTTTCGTCATGGGTTTGAATCAGATCATAATTGCTCAGCAGCTCTCATACACATGTACTGCAAGCGCCGGAAAGAATTGCGTCCTGCCAAGCTAATTTTCGACAAGGTATCTCTTAAAGATGTTGTTATGTGGAGTTTGATGATTGGGAGTTATTCTCAATGTGGGGATTTCGTGAAAGCTTTGGAACTTTTTAGTCAAATGCGAGCTCAAGGAATTGATCCAAACTCTGTAACATTACTGGCCCTCATTTCCGCCTGCACCTCACTTTCTTCTCTACAGATCGGATGTGGAATCCATAGCTATGTCTTGAAATCTGGGTTAAATTCTGACATTTTCATTGGGAATGCACTTATCAATATGTATGCAAAGTGTGGTTGTCTCACGGATTCACATGAAATTTTCAAGGAGATGCCAAGTATAGATTCTGTCTCCTGGAGCACAATGATTGAGAGCTATGGCCTTCATGGTCGTGGTAATGAAGCTTTGAAACTCTTTCTTGAGATGCAAGATAGAGGGATAGAGCCTGATGCGGTCGCTTTCCTCTCAGTTTTATCTGCTTGTAACCATGCTGGCCTGGTGGAAGAAGGCAAGAAGATCTTTAAACTTATGAGAGAAGATAGTAAAATAACTGTATCTTTAGAGCATTATGCTTGCTATGTTAATCTTCTTGGAAAGTTTGGAAAGCTCGAAGATGCTTGTGAGACTGTAAGATCAATGCCCATGAAACCAAGTAGTAGAATTTGGAGTTCTTTGGTTACAGCTTGCAAGGTTCACGGAAGGTTAGAAATAGCAGAATCCTTGGCGCATCATCTTGTTACAAAGGAGCCTCAGAATGCTGCCAACTATGCCTTACTGAGCATGGTTCATGCTGAAGCTGGTAACTGGCTTGGCGTGGAGGAGGTGAGGAGAGTCATGAGAGTACACAGATTGAGGAAATGCTACGGATTCAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

623

Amino Acids

69.1

Weight (kDa)

8.33

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	138 - 171	7.4e-07	PPR repeat family
PPR	PF01535	141 - 170	4.3e-07	PPR repeat
PPR_2	PF13041	241 - 288	1.1e-08	PPR repeat family
PPR_2	PF13041	342 - 389	1.2e-10	PPR repeat family
PPR	PF01535	345 - 375	5.4e-07	PPR repeat
PPR_2	PF13041	444 - 490	1.3e-10	PPR repeat family
PPR	PF01535	446 - 476	5.9e-08	PPR repeat
E_motif	PF20431	561 - 622	2.7e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31070 AT4G31070
fragaria_vesca	FvH4_4g00140
malus_domestica	MD04G1001600.v1.1
prunus_persica	Prupe.1G001600_v2.0.a1
pyrus_communis	pycom04g00220
rosa_chinensis	RchiOBHm_Chr4g0384761
rosa_laevigata	RLG00000010274
rosa_roxburghii	Rroxscaffold_5G00332820
rosa_rugosa	Rorug03G0297500
rosa_samantha	Rh4AG001000 Rh4BG000900 Rh4CG000800 Rh4DG000900
rosa_wichuraiana	Rw0G021980 Rw4G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	796
AccB7I	CCANNNNNTGG	1 cut(s)	426
AciI	CCGC	4 cut(s)	45, 524, 1161, 1439
AclWI	GGATC	1 cut(s)	1121
AcsI	RAATTY	6 cut(s)	430, 894, 1231, 1305, 1647, 1863
AcuI	CTGAAG	1 cut(s)	1800
AfaI	GTAC	2 cut(s)	965, 1830
AfiI	CCNNNNNNNGG	3 cut(s)	37, 270, 426
AflIII	ACRYGT	1 cut(s)	960
AjnI	CCWGG	3 cut(s)	425, 1340, 1482
AjuI	GAANNNNNNNTTGG	4 cut(s)	989, 1021, 1315, 1347
AleI	CACNNNNGTG	1 cut(s)	88
Alw21I	GWGCWC	3 cut(s)	198, 1117, 1349
Alw26I	GTCTC	8 cut(s)	154, 408, 577, 733, 867, 1292, 1342, 1604
AlwI	GGATC	1 cut(s)	1121
Ama87I	CYCGRG	1 cut(s)	86
ApeKI	GCWGC	4 cut(s)	380, 768, 947, 1745
ApoI	RAATTY	6 cut(s)	430, 894, 1231, 1305, 1647, 1863
ArsI	GACNNNNNNTTYG	2 cut(s)	132, 164
Asp700I	GAANNNNTTC	1 cut(s)	791
AspLEI	GCGC	2 cut(s)	975, 1714
AspS9I	GGNCC	3 cut(s)	11, 209, 1150
AsuC2I	CCSGG	2 cut(s)	389, 797
AsuHPI	GGTGA	2 cut(s)	415, 1822
AvaI	CYCGRG	1 cut(s)	86
BaeGI	GKGCMC	1 cut(s)	95
BanII	GRGCYC	2 cut(s)	198, 1117
BbsI	GAAGAC	1 cut(s)	105
Bbv12I	GWGCWC	3 cut(s)	198, 1117, 1349
BbvI	GCAGC	4 cut(s)	392, 780, 959, 1732
BccI	CCATC	6 cut(s)	31, 239, 323, 428, 679, 772
BceAI	ACGGC	1 cut(s)	660
BciT130I	CCWGG	3 cut(s)	427, 1342, 1484
BciVI	GTATCC	1 cut(s)	343
BclI	TGATCA	1 cut(s)	166
BcnI	CCSGG	2 cut(s)	389, 797
BcoDI	GTCTC	8 cut(s)	154, 408, 577, 733, 867, 1292, 1342, 1604
BfaI	CTAG	1 cut(s)	578
BfmI	CTRYAG	1 cut(s)	1184
BfoI	RGCGCY	1 cut(s)	976
BfuAI	ACCTGC	1 cut(s)	796
BfuI	GTATCC	1 cut(s)	343
BglII	AGATCT	1 cut(s)	1503
BisI	GCNGC	5 cut(s)	46, 381, 769, 948, 1746
BlpI	GCTNAGC	1 cut(s)	943
BlsI	GCNGC	5 cut(s)	47, 382, 770, 949, 1747
Bme1390I	CCNGG	5 cut(s)	389, 427, 797, 1342, 1484
BmeT110I	CYCGRG	1 cut(s)	86
BmgT120I	GGNCC	3 cut(s)	11, 209, 1150
BmiI	GGNNCC	3 cut(s)	211, 313, 1734
BmrFI	CCNGG	5 cut(s)	389, 427, 797, 1342, 1484
BmsI	GCATC	9 cut(s)	34, 472, 549, 743, 1308, 1401, 1426, 1591, 1723
BpiI	GAAGAC	1 cut(s)	105
BplI	GAGNNNNNCTC	2 cut(s)	1048, 1080
BpmI	CTGGAG	1 cut(s)	1363
Bpu1102I	GCTNAGC	1 cut(s)	943
BpuEI	CTTGAG	3 cut(s)	287, 1101, 1427
BpuMI	CCSGG	2 cut(s)	389, 797
BsaI	GGTCTC	1 cut(s)	154
BsaJI	CCNNGG	7 cut(s)	49, 55, 61, 67, 95, 268, 1707
Bsc4I	CCNNNNNNNGG	3 cut(s)	37, 270, 426
Bse1I	ACTGG	2 cut(s)	1152, 1796
Bse3DI	GCAATG	1 cut(s)	756
BseBI	CCWGG	3 cut(s)	427, 1342, 1484
BseDI	CCNNGG	7 cut(s)	49, 55, 61, 67, 95, 268, 1707
BseGI	GGATG	4 cut(s)	231, 758, 783, 1199
BseLI	CCNNNNNNNGG	3 cut(s)	37, 270, 426
BseMI	GCAATG	1 cut(s)	756
BseMII	CTCAG	5 cut(s)	333, 957, 1467, 1751, 1754
BseNI	ACTGG	2 cut(s)	1152, 1796
BseRI	GAGGAG	4 cut(s)	20, 250, 1820, 1828
BseSI	GKGCMC	1 cut(s)	95
BseXI	GCAGC	4 cut(s)	392, 780, 959, 1732
BsgI	GTGCAG	1 cut(s)	1150
Bsh1285I	CGRYCG	1 cut(s)	1443
BsiEI	CGRYCG	1 cut(s)	1443
BsiHKAI	GWGCWC	3 cut(s)	198, 1117, 1349
BsiHKCI	CYCGRG	1 cut(s)	86
BsiSI	CCGG	3 cut(s)	388, 796, 976
BslI	CCNNNNNNNGG	3 cut(s)	37, 270, 426
BsmAI	GTCTC	8 cut(s)	154, 408, 577, 733, 867, 1292, 1342, 1604
BsmI	GAATGC	2 cut(s)	1258, 1747
Bso31I	GGTCTC	1 cut(s)	154
BsoBI	CYCGRG	1 cut(s)	86
Bsp1286I	GDGCHC	4 cut(s)	95, 198, 1117, 1349
Bsp143I	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
Bsp1720I	GCTNAGC	1 cut(s)	943
Bsp19I	CCATGG	1 cut(s)	268
BspACI	CCGC	4 cut(s)	45, 524, 1161, 1439
BspCNI	CTCAG	5 cut(s)	332, 956, 1466, 1750, 1755
BspHI	TCATGA	1 cut(s)	1821
BspLI	GGNNCC	3 cut(s)	211, 313, 1734
BspMI	ACCTGC	1 cut(s)	796
BspPI	GGATC	1 cut(s)	1121
BspTNI	GGTCTC	1 cut(s)	154
BsrDI	GCAATG	1 cut(s)	756
BsrI	ACTGG	2 cut(s)	1152, 1796
BssECI	CCNNGG	7 cut(s)	49, 55, 61, 67, 95, 268, 1707
BssMI	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
BssT1I	CCWWGG	3 cut(s)	95, 268, 1707
Bst2UI	CCWGG	3 cut(s)	427, 1342, 1484
Bst4CI	ACNGT	3 cut(s)	838, 1540, 1615
Bst6I	CTCTTC	1 cut(s)	618
BstDEI	CTNAG	5 cut(s)	319, 943, 1453, 1737, 1763
BstDSI	CCRYGG	1 cut(s)	268
BstF5I	GGATG	4 cut(s)	231, 758, 783, 1199
BstH2I	RGCGCY	1 cut(s)	976
BstHHI	GCGC	2 cut(s)	975, 1714
BstKTI	GATC	6 cut(s)	169, 934, 1129, 1191, 1506, 1622
BstMAI	GTCTC	8 cut(s)	154, 408, 577, 733, 867, 1292, 1342, 1604
BstMBI	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
BstMCI	CGRYCG	1 cut(s)	1443
BstMWI	GCNNNNNNNGC	3 cut(s)	51, 365, 1754
BstNI	CCWGG	3 cut(s)	427, 1342, 1484
BstNSI	RCATGY	3 cut(s)	258, 712, 964
BstSCI	CCNGG	5 cut(s)	387, 425, 795, 1340, 1482
BstSFI	CTRYAG	1 cut(s)	1184
BstSLI	GKGCMC	1 cut(s)	95
BstV1I	GCAGC	4 cut(s)	392, 780, 959, 1732
BstV2I	GAAGAC	1 cut(s)	105
BstX2I	RGATCY	1 cut(s)	1503
BstXI	CCANNNNNNTGG	2 cut(s)	206, 275
BstYI	RGATCY	1 cut(s)	1503
BsuI	GTATCC	1 cut(s)	343
BtgI	CCRYGG	1 cut(s)	268
BtsCI	GGATG	4 cut(s)	231, 758, 783, 1199
BtsI	GCAGTG	1 cut(s)	289
BtsIMutI	CAGTG	2 cut(s)	289, 834
BveI	ACCTGC	1 cut(s)	796
CciI	TCATGA	1 cut(s)	1821
CfoI	GCGC	2 cut(s)	975, 1714
Cfr13I	GGNCC	3 cut(s)	11, 209, 1150
CseI	GACGC	1 cut(s)	977
Csp6I	GTAC	2 cut(s)	964, 1829
CviQI	GTAC	2 cut(s)	964, 1829
DdeI	CTNAG	5 cut(s)	319, 943, 1453, 1737, 1763
DpnI	GATC	6 cut(s)	168, 933, 1128, 1190, 1505, 1621
DpnII	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
DraI	TTTAAA	1 cut(s)	1510
Eam1104I	CTCTTC	1 cut(s)	618
EarI	CTCTTC	1 cut(s)	618
EciI	GGCGGA	1 cut(s)	1150
Ecl136II	GAGCTC	2 cut(s)	196, 1115
Eco130I	CCWWGG	3 cut(s)	95, 268, 1707
Eco24I	GRGCYC	2 cut(s)	198, 1117
Eco31I	GGTCTC	1 cut(s)	154
Eco53kI	GAGCTC	2 cut(s)	196, 1115
Eco57I	CTGAAG	1 cut(s)	1800
Eco88I	CYCGRG	1 cut(s)	86
EcoICRI	GAGCTC	2 cut(s)	196, 1115
EcoRI	GAATTC	1 cut(s)	430
EcoRII	CCWGG	3 cut(s)	425, 1340, 1482
EcoT14I	CCWWGG	3 cut(s)	95, 268, 1707
EcoT22I	ATGCAT	1 cut(s)	758
EcoT38I	GRGCYC	2 cut(s)	198, 1117
ErhI	CCWWGG	3 cut(s)	95, 268, 1707
FalI	AAGNNNNNCTT	2 cut(s)	1490, 1522
FbaI	TGATCA	1 cut(s)	166
Fnu4HI	GCNGC	5 cut(s)	46, 381, 769, 948, 1746
FokI	GGATG	4 cut(s)	218, 765, 790, 1206
FriOI	GRGCYC	2 cut(s)	198, 1117
Fsp4HI	GCNGC	5 cut(s)	46, 381, 769, 948, 1746
FspBI	CTAG	1 cut(s)	578
GlaI	GCGC	2 cut(s)	974, 1713
GluI	GCNGC	5 cut(s)	46, 381, 769, 948, 1746
GsuI	CTGGAG	1 cut(s)	1363
HaeII	RGCGCY	1 cut(s)	976
HapII	CCGG	3 cut(s)	388, 796, 976
HgaI	GACGC	1 cut(s)	977
HhaI	GCGC	2 cut(s)	975, 1714
Hin6I	GCGC	2 cut(s)	973, 1712
HinP1I	GCGC	2 cut(s)	973, 1712
HincII	GTYRAC	1 cut(s)	642
HindII	GTYRAC	1 cut(s)	642
HindIII	AAGCTT	2 cut(s)	1086, 1389
HpaII	CCGG	3 cut(s)	388, 796, 976
HphI	GGTGA	2 cut(s)	415, 1822
Hpy166II	GTNNAC	3 cut(s)	642, 1681, 1831
Hpy188I	TCNGA	6 cut(s)	171, 322, 931, 1193, 1237, 1740
Hpy188III	TCNNGA	7 cut(s)	34, 674, 750, 1081, 1216, 1406, 1822
Hpy8I	GTNNAC	3 cut(s)	642, 1681, 1831
HpyAV	CCTTC	9 cut(s)	185, 245, 249, 700, 806, 883, 1379, 1487, 1680
HpyCH4III	ACNGT	3 cut(s)	838, 1540, 1615
HpyF10VI	GCNNNNNNNGC	3 cut(s)	51, 365, 1754
HpyF3I	CTNAG	5 cut(s)	319, 943, 1453, 1737, 1763
HspAI	GCGC	2 cut(s)	973, 1712
Ksp22I	TGATCA	1 cut(s)	166
Kzo9I	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
LmnI	GCTCC	6 cut(s)	201, 263, 317, 377, 1344, 1732
Lsp1109I	GCAGC	4 cut(s)	392, 780, 959, 1732
LweI	GCATC	9 cut(s)	34, 472, 549, 743, 1308, 1401, 1426, 1591, 1723
MaeI	CTAG	1 cut(s)	578
MaeIII	GTNAC	9 cut(s)	125, 671, 704, 832, 1138, 1469, 1663, 1723, 1787
MalI	GATC	6 cut(s)	168, 933, 1128, 1190, 1505, 1621
MboI	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
MboII	GAAGA	8 cut(s)	105, 635, 1170, 1502, 1513, 1535, 1565, 1610
MflI	RGATCY	1 cut(s)	1503
MhlI	GDGCHC	4 cut(s)	95, 198, 1117, 1349
MlyI	GAGTC	5 cut(s)	109, 317, 635, 840, 1827
MmeI	TCCRAC	1 cut(s)	355
Mph1103I	ATGCAT	1 cut(s)	758
MroXI	GAANNNNTTC	1 cut(s)	791
MseI	TTAA	5 cut(s)	489, 1023, 1229, 1509, 1569
MslI	CAYNNNNRTG	8 cut(s)	88, 204, 273, 350, 713, 959, 1209, 1377
MspI	CCGG	3 cut(s)	388, 796, 976
MspR9I	CCNGG	5 cut(s)	389, 427, 797, 1342, 1484
Mva1269I	GAATGC	2 cut(s)	1258, 1747
MvaI	CCWGG	3 cut(s)	427, 1342, 1484
MwoI	GCNNNNNNNGC	3 cut(s)	51, 365, 1754
NciI	CCSGG	2 cut(s)	389, 797
NcoI	CCATGG	1 cut(s)	268
NdeII	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
NlaIV	GGNNCC	3 cut(s)	211, 313, 1734
NmeAIII	GCCGAG	5 cut(s)	30, 36, 42, 48, 889
NmuCI	GTSAC	3 cut(s)	671, 704, 832
NsiI	ATGCAT	1 cut(s)	758
NspI	RCATGY	3 cut(s)	258, 712, 964
OliI	CACNNNNGTG	1 cut(s)	88
PaeI	GCATGC	1 cut(s)	258
PagI	TCATGA	1 cut(s)	1821
PciI	ACATGT	1 cut(s)	960
PctI	GAATGC	2 cut(s)	1258, 1747
PdmI	GAANNNNTTC	1 cut(s)	791
PfeI	GAWTC	7 cut(s)	589, 926, 1200, 1295, 1331, 1703, 1854
PflFI	GACNNNGTC	1 cut(s)	146
PflMI	CCANNNNNTGG	1 cut(s)	426
PfoI	TCCNGGA	2 cut(s)	795, 1340
PkrI	GCNGC	5 cut(s)	47, 382, 770, 949, 1747
PleI	GAGTC	5 cut(s)	108, 317, 634, 839, 1826
PpsI	GAGTC	5 cut(s)	108, 317, 634, 839, 1826
PscI	ACATGT	1 cut(s)	960
Psp124BI	GAGCTC	2 cut(s)	198, 1117
Psp6I	CCWGG	3 cut(s)	425, 1340, 1482
PspGI	CCWGG	3 cut(s)	425, 1340, 1482
PspN4I	GGNNCC	3 cut(s)	211, 313, 1734
PspPI	GGNCC	3 cut(s)	11, 209, 1150
PsuI	RGATCY	1 cut(s)	1503
PsyI	GACNNNGTC	1 cut(s)	146
RsaI	GTAC	2 cut(s)	965, 1830
RsaNI	GTAC	2 cut(s)	964, 1829
RseI	CAYNNNNRTG	8 cut(s)	88, 204, 273, 350, 713, 959, 1209, 1377
SacI	GAGCTC	2 cut(s)	198, 1117
SaqAI	TTAA	5 cut(s)	489, 1023, 1229, 1509, 1569
SatI	GCNGC	5 cut(s)	46, 381, 769, 948, 1746
Sau3AI	GATC	6 cut(s)	166, 931, 1126, 1188, 1503, 1619
Sau96I	GGNCC	3 cut(s)	11, 209, 1150
SchI	GAGTC	5 cut(s)	109, 317, 635, 840, 1827
ScrFI	CCNGG	5 cut(s)	389, 427, 797, 1342, 1484
SduI	GDGCHC	4 cut(s)	95, 198, 1117, 1349
SfaNI	GCATC	9 cut(s)	34, 472, 549, 743, 1308, 1401, 1426, 1591, 1723
SfcI	CTRYAG	1 cut(s)	1184
SmiMI	CAYNNNNRTG	8 cut(s)	88, 204, 273, 350, 713, 959, 1209, 1377
SmlI	CTYRAG	3 cut(s)	302, 1116, 1406
SmoI	CTYRAG	3 cut(s)	302, 1116, 1406
SphI	GCATGC	1 cut(s)	258
SsiI	CCGC	4 cut(s)	45, 524, 1161, 1439
SspMI	CTAG	1 cut(s)	578
SstI	GAGCTC	2 cut(s)	198, 1117
StyD4I	CCNGG	5 cut(s)	387, 425, 795, 1340, 1482
StyI	CCWWGG	3 cut(s)	95, 268, 1707
TaaI	ACNGT	3 cut(s)	838, 1540, 1615
TaqI	TCGA	3 cut(s)	829, 1008, 1596
TatI	WGTACW	2 cut(s)	963, 1828
TauI	GCSGC	1 cut(s)	48
TfiI	GAWTC	7 cut(s)	589, 926, 1200, 1295, 1331, 1703, 1854
Tru1I	TTAA	5 cut(s)	489, 1023, 1229, 1509, 1569
Tru9I	TTAA	5 cut(s)	489, 1023, 1229, 1509, 1569
TscAI	CASTG	2 cut(s)	296, 841
TseFI	GTSAC	3 cut(s)	671, 704, 832
TseI	GCWGC	4 cut(s)	380, 768, 947, 1745
Tsp45I	GTSAC	3 cut(s)	671, 704, 832
TspGWI	ACGGA	4 cut(s)	316, 1307, 1698, 1866
TspRI	CASTG	2 cut(s)	296, 841
Tth111I	GACNNNGTC	1 cut(s)	146
Van91I	CCANNNNNTGG	1 cut(s)	426
XapI	RAATTY	6 cut(s)	430, 894, 1231, 1305, 1647, 1863
XceI	RCATGY	3 cut(s)	258, 712, 964
XcmI	CCANNNNNNNNNTGG	1 cut(s)	272
XmnI	GAANNNNTTC	1 cut(s)	791
XspI	CTAG	1 cut(s)	578
Zsp2I	ATGCAT	1 cut(s)	758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.