Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0015256

Physical Location & Seq

Genomic Coordinates Forward (+)

1568311 .. 1570104

Gene Structure 1794 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G000790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGCATCATGTGATCAGGAGTCGCTCCGCGTCTTCTGGCCTTTGCTACATCAAAATCAAAGACTTGGTCTCTAAAGGATTATATGATCAAGCCCTTCAACTTTACAGAGACGAGCTCCATTCTTATGGCCTCCTCCACGCAAACACCTCCATCCTTCCTTCAATCATCAAAGCATGCTCCTCCCACCATGGGCATGGGCATGGGCTTCAACTTCACTGCATGGCTATCAAGTCAGGCTCCATCTCAGACTCCGTTGTATCCAATTCTCTCATCTCCATGTATGCCAAACTCGCACTTGTTGGAGCAGCACGCCGGGTGTTTGATGAAATGCCTGAAAGAGACACCATCACCTGGAATTCCATGATGAATTGCTACATACAAAATGGGCATCTTGCAAAAGCACTTGATGTGCTTAAACAAATGTATTTGAATGGTTTTACACTGAAAGCGGAGTTGATTGCCAGCATCATATCAGTTTGTGCCAGGACAAGAAAGTTTAGACTAGGGAGACAGATTCATGGCCTCCTTGTTGTCCATGACGAGATTGAAGAGTCGGTGTTCTTGTCAACGGCTCTGCTTGATTTGTATATGAGGTGTCACGAAACTTTGATGGCCTTCCATGTTTTCTGTCACATGCAAGTGAAAAATGAAGTCTCTTGGACTGCCATGATTTCGGGATGCATTGCTAATCGCAGCTATGGGATGGCAATGCATTGCTTCCGGGAAATGCAGGTTGAAGGATTGAAACCCAATCGAGTCACTGTGCTTGCCATTTTACCAGCTTGTGCCGAGTTGGGAGACATAGGACATGGGAAGGAAATTCATGCCTATATTTTTCGTCATGGGTTTGAATCAGATCACCATTGCTCAGCAGCTCTCATACACATGTACTGCAAGCGCGGGAAAGAATTGCGTCCTGCCAAGCTAATTTTCGACAGGGTATCTCTTAAAGATGTTGTTATGTGGAGTTTGATGATTGGGAGTTATTCTCAATGTGGGGATTTCGTGAAATCTTTGAAACTTTTTAGTCAAATGCGAGCTCAAGGAATTGATCCAAACTCTGTAACGTTACTGGCCCTCATTTCCGCCTGCACCACACTCTATTCTCTACAGATCGGATGTGGAATCCATAGCTATGTCTTGAAATCTGGGTTAAATTCTGACATTTTCATTGGGAATGCACTTATCAATATGTATGCAAAGTGTGGTTGTCTCACGGATTCACATGAAATTTTCAAGGAGATGCCAAGTATAGATTCTGTCTCCTGGAGCACAATGATTGAGAGCTATGGCCTTCATGGTCATGGTAATGAAGCTTTGAAACTCTTTCTTGAGATGCAAGATAGAGGGATAGAGCCTGATGCGGTCGCTTTCCTCTCAGTTTTATCTGCTTGTAACCATGCTGGCCTGGTGGAAGAAGGCAAGAAGATCTTTAAACTTATGAGAGAAGATAGTAAAATAACTGTATCCTTAGAGCATTATGCTTGCTATATTAATCTTCTTGGAAAGTTTGGAAAGCTCGAAGATGCTTGTGACATTGTACGATCAATGCCCATGAAACCAAGTAGTAGAATTTGGAGTTCTTTGGTTACAGCTTGCAAGGTTCACGGAAGGTTAGAAATAGCAGAATCCTTGGCGCATCATCTTGTTAGAAAGGAGCCTCAGAACGCTGCCAACTATGCCTTACTGAGCATGGTTCATGCTGAAGCTGGTAACTGGCTTGGCGTGGAGGAGGTGAGGAGAGTCATGAGAGTACACAGATTAAGGAAATGCTACGGATTCAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

597

Amino Acids

66.77

Weight (kDa)

8.59

Isoelectric Point (pI)

41.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	113 - 146	1.6e-06	PPR repeat family
PPR	PF01535	116 - 145	1.1e-06	PPR repeat
PPR_2	PF13041	216 - 263	1.4e-08	PPR repeat family
PPR_2	PF13041	317 - 364	2.1e-09	PPR repeat family
PPR	PF01535	320 - 350	9.1e-06	PPR repeat
PPR_2	PF13041	419 - 465	1.3e-10	PPR repeat family
PPR	PF01535	421 - 451	1.4e-07	PPR repeat
E_motif	PF20431	536 - 597	2.4e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31070 AT4G31070
fragaria_vesca	FvH4_4g00140
malus_domestica	MD04G1001600.v1.1
prunus_persica	Prupe.1G001600_v2.0.a1
pyrus_communis	pycom04g00220
rosa_chinensis	RchiOBHm_Chr4g0384761
rosa_laevigata	RLG00000010274
rosa_roxburghii	Rroxscaffold_5G00332820
rosa_rugosa	Rorug03G0297500
rosa_samantha	Rh4AG001000 Rh4BG000900 Rh4CG000800 Rh4DG000900
rosa_wichuraiana	Rw0G021980 Rw4G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	721
AccB7I	CCANNNNNTGG	1 cut(s)	351
AccII	CGCG	2 cut(s)	29, 900
AciI	CCGC	5 cut(s)	27, 449, 900, 1086, 1364
AclI	AACGTT	1 cut(s)	1067
AclWI	GGATC	1 cut(s)	1046
AcsI	RAATTY	6 cut(s)	355, 819, 1156, 1230, 1572, 1788
AcuI	CTGAAG	1 cut(s)	1725
AfaI	GTAC	3 cut(s)	890, 1542, 1755
AfiI	CCNNNNNNNGG	2 cut(s)	189, 351
AflIII	ACRYGT	1 cut(s)	885
AjnI	CCWGG	4 cut(s)	350, 482, 1265, 1407
AjuI	GAANNNNNNNTTGG	4 cut(s)	914, 946, 1240, 1272
Alw21I	GWGCWC	3 cut(s)	117, 1042, 1274
Alw26I	GTCTC	8 cut(s)	73, 102, 333, 502, 658, 792, 1217, 1267
AlwI	GGATC	1 cut(s)	1046
AoxI	GGCC	7 cut(s)	37, 127, 520, 612, 1074, 1291, 1405
ApeKI	GCWGC	4 cut(s)	305, 693, 872, 1670
ApoI	RAATTY	6 cut(s)	355, 819, 1156, 1230, 1572, 1788
ArsI	GACNNNNNNTTYG	2 cut(s)	51, 83
AseI	ATTAAT	1 cut(s)	1494
AspLEI	GCGC	2 cut(s)	900, 1639
AspS9I	GGNCC	1 cut(s)	1075
AsuC2I	CCSGG	2 cut(s)	314, 722
AsuHPI	GGTGA	3 cut(s)	340, 851, 1747
BanII	GRGCYC	2 cut(s)	117, 1042
BbsI	GAAGAC	1 cut(s)	24
Bbv12I	GWGCWC	3 cut(s)	117, 1042, 1274
BbvI	GCAGC	4 cut(s)	317, 705, 884, 1657
BccI	CCATC	5 cut(s)	158, 248, 353, 604, 697
BceAI	ACGGC	1 cut(s)	585
BciT130I	CCWGG	4 cut(s)	352, 484, 1267, 1409
BciVI	GTATCC	2 cut(s)	268, 1477
BclI	TGATCA	2 cut(s)	12, 85
BcnI	CCSGG	2 cut(s)	314, 722
BcoDI	GTCTC	8 cut(s)	73, 102, 333, 502, 658, 792, 1217, 1267
BfaI	CTAG	1 cut(s)	503
BfmI	CTRYAG	1 cut(s)	1109
BfuAI	ACCTGC	1 cut(s)	721
BfuI	GTATCC	2 cut(s)	268, 1477
BglII	AGATCT	1 cut(s)	1428
BisI	GCNGC	4 cut(s)	306, 694, 873, 1671
BlpI	GCTNAGC	1 cut(s)	868
BlsI	GCNGC	4 cut(s)	307, 695, 874, 1672
Bme1390I	CCNGG	6 cut(s)	314, 352, 484, 722, 1267, 1409
BmgT120I	GGNCC	1 cut(s)	1075
BmiI	GGNNCC	2 cut(s)	238, 1659
BmrFI	CCNGG	6 cut(s)	314, 352, 484, 722, 1267, 1409
BmsI	GCATC	9 cut(s)	13, 397, 474, 668, 1233, 1326, 1351, 1516, 1648
BpiI	GAAGAC	1 cut(s)	24
BplI	GAGNNNNNCTC	4 cut(s)	99, 131, 973, 1005
BpmI	CTGGAG	1 cut(s)	1288
Bpu1102I	GCTNAGC	1 cut(s)	868
BpuEI	CTTGAG	2 cut(s)	1026, 1352
BpuMI	CCSGG	2 cut(s)	314, 722
BsaI	GGTCTC	1 cut(s)	73
BsaJI	CCNNGG	2 cut(s)	187, 1632
Bsc4I	CCNNNNNNNGG	2 cut(s)	189, 351
Bse1I	ACTGG	2 cut(s)	1077, 1721
Bse3DI	GCAATG	4 cut(s)	681, 712, 714, 862
BseBI	CCWGG	4 cut(s)	352, 484, 1267, 1409
BseDI	CCNNGG	2 cut(s)	187, 1632
BseGI	GGATG	4 cut(s)	150, 683, 708, 1124
BseLI	CCNNNNNNNGG	2 cut(s)	189, 351
BseMI	GCAATG	4 cut(s)	681, 712, 714, 862
BseMII	CTCAG	5 cut(s)	258, 882, 1392, 1676, 1679
BseNI	ACTGG	2 cut(s)	1077, 1721
BseRI	GAGGAG	4 cut(s)	122, 169, 1745, 1753
BseXI	GCAGC	4 cut(s)	317, 705, 884, 1657
BsgI	GTGCAG	1 cut(s)	1075
Bsh1236I	CGCG	2 cut(s)	29, 900
Bsh1285I	CGRYCG	1 cut(s)	1368
BshFI	GGCC	7 cut(s)	39, 129, 522, 614, 1076, 1293, 1407
BsiEI	CGRYCG	1 cut(s)	1368
BsiHKAI	GWGCWC	3 cut(s)	117, 1042, 1274
BsiSI	CCGG	2 cut(s)	313, 721
BslI	CCNNNNNNNGG	2 cut(s)	189, 351
BsmAI	GTCTC	8 cut(s)	73, 102, 333, 502, 658, 792, 1217, 1267
BsmBI	CGTCTC	1 cut(s)	102
BsmI	GAATGC	1 cut(s)	1183
BsnI	GGCC	7 cut(s)	39, 129, 522, 614, 1076, 1293, 1407
Bso31I	GGTCTC	1 cut(s)	73
Bsp1286I	GDGCHC	3 cut(s)	117, 1042, 1274
Bsp143I	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
Bsp1720I	GCTNAGC	1 cut(s)	868
Bsp19I	CCATGG	1 cut(s)	187
BspACI	CCGC	5 cut(s)	27, 449, 900, 1086, 1364
BspANI	GGCC	7 cut(s)	39, 129, 522, 614, 1076, 1293, 1407
BspCNI	CTCAG	5 cut(s)	257, 881, 1391, 1675, 1680
BspFNI	CGCG	2 cut(s)	29, 900
BspHI	TCATGA	1 cut(s)	1746
BspLI	GGNNCC	2 cut(s)	238, 1659
BspMI	ACCTGC	1 cut(s)	721
BspPI	GGATC	1 cut(s)	1046
BspTNI	GGTCTC	1 cut(s)	73
BsrDI	GCAATG	4 cut(s)	681, 712, 714, 862
BsrI	ACTGG	2 cut(s)	1077, 1721
BssECI	CCNNGG	2 cut(s)	187, 1632
BssMI	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
BssT1I	CCWWGG	2 cut(s)	187, 1632
Bst2UI	CCWGG	4 cut(s)	352, 484, 1267, 1409
Bst4CI	ACNGT	2 cut(s)	763, 1465
Bst6I	CTCTTC	1 cut(s)	543
BstDEI	CTNAG	6 cut(s)	244, 868, 1378, 1471, 1662, 1688
BstDSI	CCRYGG	1 cut(s)	187
BstF5I	GGATG	4 cut(s)	150, 683, 708, 1124
BstFNI	CGCG	2 cut(s)	29, 900
BstHHI	GCGC	2 cut(s)	900, 1639
BstKTI	GATC	7 cut(s)	15, 88, 859, 1054, 1116, 1431, 1547
BstMAI	GTCTC	8 cut(s)	73, 102, 333, 502, 658, 792, 1217, 1267
BstMBI	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
BstMCI	CGRYCG	1 cut(s)	1368
BstMWI	GCNNNNNNNGC	2 cut(s)	290, 1679
BstNI	CCWGG	4 cut(s)	352, 484, 1267, 1409
BstNSI	RCATGY	3 cut(s)	177, 637, 889
BstSCI	CCNGG	6 cut(s)	312, 350, 482, 720, 1265, 1407
BstSFI	CTRYAG	1 cut(s)	1109
BstUI	CGCG	2 cut(s)	29, 900
BstV1I	GCAGC	4 cut(s)	317, 705, 884, 1657
BstV2I	GAAGAC	1 cut(s)	24
BstX2I	RGATCY	1 cut(s)	1428
BstXI	CCANNNNNNTGG	2 cut(s)	125, 194
BstYI	RGATCY	1 cut(s)	1428
BsuI	GTATCC	2 cut(s)	268, 1477
BsuRI	GGCC	7 cut(s)	39, 129, 522, 614, 1076, 1293, 1407
BtgI	CCRYGG	1 cut(s)	187
BtsCI	GGATG	4 cut(s)	150, 683, 708, 1124
BtsI	GCAGTG	1 cut(s)	214
BtsIMutI	CAGTG	3 cut(s)	214, 440, 759
BveI	ACCTGC	1 cut(s)	721
CciI	TCATGA	1 cut(s)	1746
CfoI	GCGC	2 cut(s)	900, 1639
Cfr13I	GGNCC	1 cut(s)	1075
CseI	GACGC	2 cut(s)	18, 902
Csp6I	GTAC	3 cut(s)	889, 1541, 1754
CviQI	GTAC	3 cut(s)	889, 1541, 1754
DdeI	CTNAG	6 cut(s)	244, 868, 1378, 1471, 1662, 1688
DpnI	GATC	7 cut(s)	14, 87, 858, 1053, 1115, 1430, 1546
DpnII	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
DraI	TTTAAA	1 cut(s)	1435
Eam1104I	CTCTTC	1 cut(s)	543
EarI	CTCTTC	1 cut(s)	543
EciI	GGCGGA	1 cut(s)	1075
Ecl136II	GAGCTC	2 cut(s)	115, 1040
Eco130I	CCWWGG	2 cut(s)	187, 1632
Eco24I	GRGCYC	2 cut(s)	117, 1042
Eco31I	GGTCTC	1 cut(s)	73
Eco53kI	GAGCTC	2 cut(s)	115, 1040
Eco57I	CTGAAG	1 cut(s)	1725
EcoICRI	GAGCTC	2 cut(s)	115, 1040
EcoRI	GAATTC	1 cut(s)	355
EcoRII	CCWGG	4 cut(s)	350, 482, 1265, 1407
EcoT14I	CCWWGG	2 cut(s)	187, 1632
EcoT22I	ATGCAT	3 cut(s)	6, 683, 714
EcoT38I	GRGCYC	2 cut(s)	117, 1042
ErhI	CCWWGG	2 cut(s)	187, 1632
Esp3I	CGTCTC	1 cut(s)	102
FalI	AAGNNNNNCTT	2 cut(s)	1415, 1447
FauI	CCCGC	1 cut(s)	893
FbaI	TGATCA	2 cut(s)	12, 85
Fnu4HI	GCNGC	4 cut(s)	306, 694, 873, 1671
FokI	GGATG	4 cut(s)	137, 690, 715, 1131
FriOI	GRGCYC	2 cut(s)	117, 1042
Fsp4HI	GCNGC	4 cut(s)	306, 694, 873, 1671
FspBI	CTAG	1 cut(s)	503
GlaI	GCGC	2 cut(s)	899, 1638
GluI	GCNGC	4 cut(s)	306, 694, 873, 1671
GsuI	CTGGAG	1 cut(s)	1288
HaeIII	GGCC	7 cut(s)	39, 129, 522, 614, 1076, 1293, 1407
HapII	CCGG	2 cut(s)	313, 721
HgaI	GACGC	2 cut(s)	18, 902
HhaI	GCGC	2 cut(s)	900, 1639
Hin6I	GCGC	2 cut(s)	898, 1637
HinP1I	GCGC	2 cut(s)	898, 1637
HincII	GTYRAC	1 cut(s)	567
HindII	GTYRAC	1 cut(s)	567
HindIII	AAGCTT	1 cut(s)	1314
HpaII	CCGG	2 cut(s)	313, 721
HphI	GGTGA	3 cut(s)	340, 851, 1747
Hpy166II	GTNNAC	3 cut(s)	567, 1606, 1756
Hpy188I	TCNGA	5 cut(s)	247, 856, 1118, 1162, 1665
Hpy188III	TCNNGA	7 cut(s)	16, 599, 675, 1006, 1141, 1331, 1747
Hpy8I	GTNNAC	3 cut(s)	567, 1606, 1756
HpyAV	CCTTC	9 cut(s)	104, 164, 168, 625, 731, 808, 1304, 1412, 1605
HpyCH4III	ACNGT	2 cut(s)	763, 1465
HpyCH4IV	ACGT	1 cut(s)	1067
HpyF10VI	GCNNNNNNNGC	2 cut(s)	290, 1679
HpyF3I	CTNAG	6 cut(s)	244, 868, 1378, 1471, 1662, 1688
HpySE526I	ACGT	1 cut(s)	1067
HspAI	GCGC	2 cut(s)	898, 1637
Ksp22I	TGATCA	2 cut(s)	12, 85
Kzo9I	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
LmnI	GCTCC	7 cut(s)	29, 120, 182, 242, 302, 1269, 1657
Lsp1109I	GCAGC	4 cut(s)	317, 705, 884, 1657
LweI	GCATC	9 cut(s)	13, 397, 474, 668, 1233, 1326, 1351, 1516, 1648
MaeI	CTAG	1 cut(s)	503
MaeII	ACGT	1 cut(s)	1067
MaeIII	GTNAC	9 cut(s)	596, 629, 757, 1063, 1068, 1394, 1532, 1588, 1712
MalI	GATC	7 cut(s)	14, 87, 858, 1053, 1115, 1430, 1546
MboI	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
MboII	GAAGA	7 cut(s)	24, 560, 1427, 1438, 1460, 1490, 1535
MflI	RGATCY	1 cut(s)	1428
MhlI	GDGCHC	3 cut(s)	117, 1042, 1274
MlyI	GAGTC	5 cut(s)	28, 242, 560, 765, 1752
MmeI	TCCRAC	1 cut(s)	280
Mph1103I	ATGCAT	3 cut(s)	6, 683, 714
MseI	TTAA	6 cut(s)	414, 948, 1154, 1434, 1494, 1763
MslI	CAYNNNNRTG	9 cut(s)	123, 192, 198, 275, 638, 884, 1134, 1302, 1308
MspI	CCGG	2 cut(s)	313, 721
MspR9I	CCNGG	6 cut(s)	314, 352, 484, 722, 1267, 1409
Mva1269I	GAATGC	1 cut(s)	1183
MvaI	CCWGG	4 cut(s)	352, 484, 1267, 1409
MvnI	CGCG	2 cut(s)	29, 900
MwoI	GCNNNNNNNGC	2 cut(s)	290, 1679
NciI	CCSGG	2 cut(s)	314, 722
NcoI	CCATGG	1 cut(s)	187
NdeII	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
NlaIV	GGNNCC	2 cut(s)	238, 1659
NmeAIII	GCCGAG	1 cut(s)	814
NmuCI	GTSAC	4 cut(s)	596, 629, 757, 1532
NsiI	ATGCAT	3 cut(s)	6, 683, 714
NspI	RCATGY	3 cut(s)	177, 637, 889
PaeI	GCATGC	1 cut(s)	177
PagI	TCATGA	1 cut(s)	1746
PciI	ACATGT	1 cut(s)	885
PctI	GAATGC	1 cut(s)	1183
PfeI	GAWTC	7 cut(s)	514, 851, 1125, 1220, 1256, 1628, 1779
PflFI	GACNNNGTC	1 cut(s)	65
PflMI	CCANNNNNTGG	1 cut(s)	351
PfoI	TCCNGGA	2 cut(s)	720, 1265
PkrI	GCNGC	4 cut(s)	307, 695, 874, 1672
PleI	GAGTC	5 cut(s)	27, 242, 559, 764, 1751
PpsI	GAGTC	5 cut(s)	27, 242, 559, 764, 1751
PscI	ACATGT	1 cut(s)	885
PshBI	ATTAAT	1 cut(s)	1494
Psp124BI	GAGCTC	2 cut(s)	117, 1042
Psp1406I	AACGTT	1 cut(s)	1067
Psp6I	CCWGG	4 cut(s)	350, 482, 1265, 1407
PspGI	CCWGG	4 cut(s)	350, 482, 1265, 1407
PspN4I	GGNNCC	2 cut(s)	238, 1659
PspPI	GGNCC	1 cut(s)	1075
PsuI	RGATCY	1 cut(s)	1428
PsyI	GACNNNGTC	1 cut(s)	65
RsaI	GTAC	3 cut(s)	890, 1542, 1755
RsaNI	GTAC	3 cut(s)	889, 1541, 1754
RseI	CAYNNNNRTG	9 cut(s)	123, 192, 198, 275, 638, 884, 1134, 1302, 1308
SacI	GAGCTC	2 cut(s)	117, 1042
SaqAI	TTAA	6 cut(s)	414, 948, 1154, 1434, 1494, 1763
SatI	GCNGC	4 cut(s)	306, 694, 873, 1671
Sau3AI	GATC	7 cut(s)	12, 85, 856, 1051, 1113, 1428, 1544
Sau96I	GGNCC	1 cut(s)	1075
SchI	GAGTC	5 cut(s)	28, 242, 560, 765, 1752
ScrFI	CCNGG	6 cut(s)	314, 352, 484, 722, 1267, 1409
SduI	GDGCHC	3 cut(s)	117, 1042, 1274
SfaNI	GCATC	9 cut(s)	13, 397, 474, 668, 1233, 1326, 1351, 1516, 1648
SfcI	CTRYAG	1 cut(s)	1109
SmiMI	CAYNNNNRTG	9 cut(s)	123, 192, 198, 275, 638, 884, 1134, 1302, 1308
SmlI	CTYRAG	2 cut(s)	1041, 1331
SmoI	CTYRAG	2 cut(s)	1041, 1331
SphI	GCATGC	1 cut(s)	177
SsiI	CCGC	5 cut(s)	27, 449, 900, 1086, 1364
SspMI	CTAG	1 cut(s)	503
SstI	GAGCTC	2 cut(s)	117, 1042
StyD4I	CCNGG	6 cut(s)	312, 350, 482, 720, 1265, 1407
StyI	CCWWGG	2 cut(s)	187, 1632
TaaI	ACNGT	2 cut(s)	763, 1465
TaiI	ACGT	1 cut(s)	1070
TaqI	TCGA	3 cut(s)	754, 933, 1521
TatI	WGTACW	2 cut(s)	888, 1753
TfiI	GAWTC	7 cut(s)	514, 851, 1125, 1220, 1256, 1628, 1779
Tru1I	TTAA	6 cut(s)	414, 948, 1154, 1434, 1494, 1763
Tru9I	TTAA	6 cut(s)	414, 948, 1154, 1434, 1494, 1763
TscAI	CASTG	3 cut(s)	221, 447, 766
TseFI	GTSAC	4 cut(s)	596, 629, 757, 1532
TseI	GCWGC	4 cut(s)	305, 693, 872, 1670
Tsp45I	GTSAC	4 cut(s)	596, 629, 757, 1532
TspGWI	ACGGA	4 cut(s)	241, 1232, 1623, 1791
TspRI	CASTG	3 cut(s)	221, 447, 766
Tth111I	GACNNNGTC	1 cut(s)	65
Van91I	CCANNNNNTGG	1 cut(s)	351
VspI	ATTAAT	1 cut(s)	1494
XapI	RAATTY	6 cut(s)	355, 819, 1156, 1230, 1572, 1788
XceI	RCATGY	3 cut(s)	177, 637, 889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	191
XspI	CTAG	1 cut(s)	503
Zsp2I	ATGCAT	3 cut(s)	6, 683, 714

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.