Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0015256

Physical Location & Seq

Genomic Coordinates Reverse (-)

231901 .. 234257

Gene Structure 2357 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG001000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGAAATCAATATACACAAGCTACAGAAACAGGAGTATGCATCATGTGATCAGGAGTCGGTTCGCGTCTTCTGGCCTTTGTTACATCAAAATCAAAGACTTGGTCTCTAAAGGATTATATGATCAAACCCTTCAACTTTACAAAGACGAGCTCCATTTCCTCCACGCAAACACCTCCATCCTTCCTTCAATCATCAAAGCATGCTCCTCCCACCATGGGCATGGGCATGGGCTTCAACTTCACTGCATGGCTCTCAAGTCAGGCTCCATCTCAGACTCCGTTGTATCCAATTCTCTCATCTCCATGTATGCCAAACTCGCACTCGTTGGAGCAGCACGCCCGGTGTTTGATGAAATGCCTGAAAGAGACACCATCACCTGGAATTCCATGATGAATTGCTACATACAAAATGGGCATCTTGCAAAAGCACTTGATGTGCTTAAACAAATGTATTTGAATGGTTTTACACTGAAAGCGGAGTTGATTGCCAGCATCATATCAGTTTGTGCAAGGACAAGAAAGTTTAGACTAGGAAGACAGATTCATGGCCTCCTTGTCGTCCATGACGAGATTGAAGAGTCGGTGTTCTTGTCAACGGCTCTGCTTGATTTGTATATGAGGTGTCACGAAACTTTGATGGCCTTCCATGTTTTCTGTCACATGCAAGTGAAAAATGAAGTCTCTTGCACTGCCATGATTTCGGGATGCATTGCTAATCGCAGCTATGGGATGGCAATGAATTGCTTCCGAGAAATGCAGGTTGAAGGATTGAAACCCAATCGAGTCACTGTGCTTGCCATTTTACCCGCTTGTGCCGAGTTGGGAGACATAGGACATGGGAAGGAAATTCATGCCTATACTTTCCGTCATGGGTTTGAATCAGATCACCATTGCTCAGCAGCTCTCATACACATGTATTGCAAGCGGGGGAAAGAATTGCGTCCTGCCAAGCTAATTTTCGACAAGGTATCTCTTAAAGATGTTGTTATGTGGAGTTTGATGATTGGGAGTTATTCTCAATGTGGGGATAGCGTGAAAGCTTTGGAACTTTTTAGCCAAATGCGAGCTCAAGGAATTGATCCAAACTCTGTAACGTTACTGGCCCTCATTTCTGCCTGCACCTCACTTTCTTCTCTACAGATCGGATGTGGAATCCATAACTATGTCTTGAAATCTGGGTTAAATTCTGACATTTTCATTGGGAATGCACTTATCAATATGTATGCGAAGTGTGGTTGTCTCACGGATTCACATGAAATTTTCAAGGAGATGCCAAGTATAGATTCTGTCTCCTGGAGCACAATGATTGAGAGCTATGGCCTTCATGGTCGTGGTGATGAAGCTTTGAAACTCTTTCTTGAGATGCAAGATAGAGCGATAGAGCTTGATGCGGTCGCTTTCCTCTCAGTTTTATCTGCTTGTAACCATGCTGGCCTGGTGGAAGAAGGCAAGAAGATCTTTAAACATATGAGAGAAGATAGTAAAATAACTGTATCTTTAGAGCATTATGCTTGCTATATTAATCTTCTTGGAAAGTTTGGAAAGCTCGAAGATGCTTGTGAGATTGTAGGATCAATGCCCATGAAACCAAGTAGTAGAATTTGGAGTTCTTTGATTACAGCTTGCAAGGTTCACGGAAGGTTAGAAATAGCAGAAACCTTGGCGCATCATCTTGTTAGAAAGGAGCCTCAGAACGCTGCCAACTATGCCTTACTGAGCATGGTTCATGCTGAAGTTGGTAACTGGCTTGGTGTGGAGGAGGTGAGGAGAGTCATGAGAGTACACAGATTAAGGAAATGCTACGGATTCAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

606

Amino Acids

67.75

Weight (kDa)

8.49

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	122 - 155	1.6e-06	PPR repeat family
PPR	PF01535	125 - 154	1.1e-06	PPR repeat
PPR_2	PF13041	225 - 272	4.7e-08	PPR repeat family
PPR_2	PF13041	326 - 373	4e-10	PPR repeat family
PPR	PF01535	329 - 359	1.6e-06	PPR repeat
PPR_2	PF13041	428 - 474	2.1e-08	PPR repeat family
PPR	PF01535	430 - 458	2e-07	PPR repeat
E_motif	PF20431	545 - 606	5.2e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31070 AT4G31070
fragaria_vesca	FvH4_4g00140
malus_domestica	MD04G1001600.v1.1
prunus_persica	Prupe.1G001600_v2.0.a1
pyrus_communis	pycom04g00220
rosa_chinensis	RchiOBHm_Chr4g0384761
rosa_laevigata	RLG00000010274
rosa_roxburghii	Rroxscaffold_5G00332820
rosa_rugosa	Rorug03G0297500
rosa_samantha	Rh4AG001000 Rh4BG000900 Rh4CG000800 Rh4DG000900
rosa_wichuraiana	Rw0G021980 Rw4G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	748
AccB7I	CCANNNNNTGG	1 cut(s)	378
AccII	CGCG	1 cut(s)	65
AciI	CCGC	4 cut(s)	476, 807, 925, 1391
AclI	AACGTT	1 cut(s)	1094
AclWI	GGATC	2 cut(s)	1073, 1579
AcsI	RAATTY	6 cut(s)	382, 846, 1183, 1257, 1599, 1815
AcuI	CTGAAG	1 cut(s)	1752
AfaI	GTAC	1 cut(s)	1782
AfiI	CCNNNNNNNGG	2 cut(s)	216, 378
AflIII	ACRYGT	1 cut(s)	912
AjnI	CCWGG	3 cut(s)	377, 1292, 1434
AjuI	GAANNNNNNNTTGG	4 cut(s)	941, 973, 1267, 1299
Alw21I	GWGCWC	3 cut(s)	153, 1069, 1301
Alw26I	GTCTC	6 cut(s)	109, 360, 685, 819, 1244, 1294
AlwI	GGATC	2 cut(s)	1073, 1579
AoxI	GGCC	6 cut(s)	73, 547, 639, 1101, 1318, 1432
ApeKI	GCWGC	4 cut(s)	332, 720, 899, 1697
ApoI	RAATTY	6 cut(s)	382, 846, 1183, 1257, 1599, 1815
ArsI	GACNNNNNNTTYG	2 cut(s)	87, 119
AseI	ATTAAT	1 cut(s)	1521
Asp700I	GAANNNNTTC	1 cut(s)	743
AspLEI	GCGC	1 cut(s)	1666
AspS9I	GGNCC	1 cut(s)	1102
AsuC2I	CCSGG	1 cut(s)	341
AsuHPI	GGTGA	4 cut(s)	367, 878, 1346, 1774
BanII	GRGCYC	2 cut(s)	153, 1069
BbsI	GAAGAC	2 cut(s)	60, 541
Bbv12I	GWGCWC	3 cut(s)	153, 1069, 1301
BbvI	GCAGC	4 cut(s)	344, 732, 911, 1684
BccI	CCATC	5 cut(s)	185, 275, 380, 631, 724
BceAI	ACGGC	1 cut(s)	612
BciT130I	CCWGG	3 cut(s)	379, 1294, 1436
BciVI	GTATCC	1 cut(s)	295
BclI	TGATCA	2 cut(s)	48, 121
BcnI	CCSGG	1 cut(s)	341
BcoDI	GTCTC	6 cut(s)	109, 360, 685, 819, 1244, 1294
BfaI	CTAG	1 cut(s)	530
BfmI	CTRYAG	2 cut(s)	22, 1136
BfuAI	ACCTGC	1 cut(s)	748
BfuI	GTATCC	1 cut(s)	295
BglII	AGATCT	1 cut(s)	1455
BisI	GCNGC	4 cut(s)	333, 721, 900, 1698
BlpI	GCTNAGC	1 cut(s)	895
BlsI	GCNGC	4 cut(s)	334, 722, 901, 1699
Bme1390I	CCNGG	4 cut(s)	341, 379, 1294, 1436
BmgT120I	GGNCC	1 cut(s)	1102
BmiI	GGNNCC	2 cut(s)	265, 1686
BmrFI	CCNGG	4 cut(s)	341, 379, 1294, 1436
BmsI	GCATC	9 cut(s)	49, 424, 501, 695, 1260, 1353, 1378, 1543, 1675
BpiI	GAAGAC	2 cut(s)	60, 541
BplI	GAGNNNNNCTC	2 cut(s)	1000, 1032
BpmI	CTGGAG	1 cut(s)	1315
Bpu1102I	GCTNAGC	1 cut(s)	895
BpuEI	CTTGAG	3 cut(s)	239, 1053, 1379
BpuMI	CCSGG	1 cut(s)	341
BsaI	GGTCTC	1 cut(s)	109
BsaJI	CCNNGG	2 cut(s)	214, 1659
Bsc4I	CCNNNNNNNGG	2 cut(s)	216, 378
Bse1I	ACTGG	2 cut(s)	1104, 1748
Bse3DI	GCAATG	3 cut(s)	708, 741, 889
BseBI	CCWGG	3 cut(s)	379, 1294, 1436
BseDI	CCNNGG	2 cut(s)	214, 1659
BseGI	GGATG	4 cut(s)	177, 710, 735, 1151
BseLI	CCNNNNNNNGG	2 cut(s)	216, 378
BseMI	GCAATG	3 cut(s)	708, 741, 889
BseMII	CTCAG	5 cut(s)	285, 909, 1419, 1703, 1706
BseNI	ACTGG	2 cut(s)	1104, 1748
BseRI	GAGGAG	3 cut(s)	196, 1772, 1780
BseXI	GCAGC	4 cut(s)	344, 732, 911, 1684
BsgI	GTGCAG	1 cut(s)	1102
Bsh1236I	CGCG	1 cut(s)	65
Bsh1285I	CGRYCG	1 cut(s)	1395
BshFI	GGCC	6 cut(s)	75, 549, 641, 1103, 1320, 1434
BsiEI	CGRYCG	1 cut(s)	1395
BsiHKAI	GWGCWC	3 cut(s)	153, 1069, 1301
BsiSI	CCGG	1 cut(s)	341
BslI	CCNNNNNNNGG	2 cut(s)	216, 378
BsmAI	GTCTC	6 cut(s)	109, 360, 685, 819, 1244, 1294
BsmI	GAATGC	1 cut(s)	1210
BsnI	GGCC	6 cut(s)	75, 549, 641, 1103, 1320, 1434
Bso31I	GGTCTC	1 cut(s)	109
Bsp1286I	GDGCHC	3 cut(s)	153, 1069, 1301
Bsp143I	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
Bsp1720I	GCTNAGC	1 cut(s)	895
Bsp19I	CCATGG	1 cut(s)	214
BspACI	CCGC	4 cut(s)	476, 807, 925, 1391
BspANI	GGCC	6 cut(s)	75, 549, 641, 1103, 1320, 1434
BspCNI	CTCAG	5 cut(s)	284, 908, 1418, 1702, 1707
BspFNI	CGCG	1 cut(s)	65
BspHI	TCATGA	1 cut(s)	1773
BspLI	GGNNCC	2 cut(s)	265, 1686
BspMI	ACCTGC	1 cut(s)	748
BspPI	GGATC	2 cut(s)	1073, 1579
BspTNI	GGTCTC	1 cut(s)	109
BsrDI	GCAATG	3 cut(s)	708, 741, 889
BsrI	ACTGG	2 cut(s)	1104, 1748
BssECI	CCNNGG	2 cut(s)	214, 1659
BssMI	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
BssT1I	CCWWGG	2 cut(s)	214, 1659
Bst2UI	CCWGG	3 cut(s)	379, 1294, 1436
Bst4CI	ACNGT	2 cut(s)	790, 1492
Bst6I	CTCTTC	1 cut(s)	570
BstDEI	CTNAG	5 cut(s)	271, 895, 1405, 1689, 1715
BstDSI	CCRYGG	1 cut(s)	214
BstF5I	GGATG	4 cut(s)	177, 710, 735, 1151
BstFNI	CGCG	1 cut(s)	65
BstHHI	GCGC	1 cut(s)	1666
BstKTI	GATC	7 cut(s)	51, 124, 886, 1081, 1143, 1458, 1574
BstMAI	GTCTC	6 cut(s)	109, 360, 685, 819, 1244, 1294
BstMBI	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
BstMCI	CGRYCG	1 cut(s)	1395
BstMWI	GCNNNNNNNGC	2 cut(s)	317, 1706
BstNI	CCWGG	3 cut(s)	379, 1294, 1436
BstNSI	RCATGY	3 cut(s)	204, 664, 916
BstSCI	CCNGG	4 cut(s)	339, 377, 1292, 1434
BstSFI	CTRYAG	2 cut(s)	22, 1136
BstUI	CGCG	1 cut(s)	65
BstV1I	GCAGC	4 cut(s)	344, 732, 911, 1684
BstV2I	GAAGAC	2 cut(s)	60, 541
BstX2I	RGATCY	1 cut(s)	1455
BstXI	CCANNNNNNTGG	1 cut(s)	221
BstYI	RGATCY	1 cut(s)	1455
BsuI	GTATCC	1 cut(s)	295
BsuRI	GGCC	6 cut(s)	75, 549, 641, 1103, 1320, 1434
BtgI	CCRYGG	1 cut(s)	214
BtsCI	GGATG	4 cut(s)	177, 710, 735, 1151
BtsI	GCAGTG	2 cut(s)	241, 687
BtsIMutI	CAGTG	4 cut(s)	241, 467, 687, 786
BveI	ACCTGC	1 cut(s)	748
CciI	TCATGA	1 cut(s)	1773
CfoI	GCGC	1 cut(s)	1666
Cfr13I	GGNCC	1 cut(s)	1102
CseI	GACGC	2 cut(s)	54, 929
Csp6I	GTAC	1 cut(s)	1781
CviQI	GTAC	1 cut(s)	1781
DdeI	CTNAG	5 cut(s)	271, 895, 1405, 1689, 1715
DpnI	GATC	7 cut(s)	50, 123, 885, 1080, 1142, 1457, 1573
DpnII	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
DraI	TTTAAA	1 cut(s)	1462
Eam1104I	CTCTTC	1 cut(s)	570
EarI	CTCTTC	1 cut(s)	570
Ecl136II	GAGCTC	2 cut(s)	151, 1067
Eco130I	CCWWGG	2 cut(s)	214, 1659
Eco24I	GRGCYC	2 cut(s)	153, 1069
Eco31I	GGTCTC	1 cut(s)	109
Eco53kI	GAGCTC	2 cut(s)	151, 1067
Eco57I	CTGAAG	1 cut(s)	1752
EcoICRI	GAGCTC	2 cut(s)	151, 1067
EcoRI	GAATTC	1 cut(s)	382
EcoRII	CCWGG	3 cut(s)	377, 1292, 1434
EcoT14I	CCWWGG	2 cut(s)	214, 1659
EcoT22I	ATGCAT	2 cut(s)	42, 710
EcoT38I	GRGCYC	2 cut(s)	153, 1069
ErhI	CCWWGG	2 cut(s)	214, 1659
FalI	AAGNNNNNCTT	2 cut(s)	1442, 1474
FauI	CCCGC	2 cut(s)	814, 918
FauNDI	CATATG	1 cut(s)	1467
FbaI	TGATCA	2 cut(s)	48, 121
Fnu4HI	GCNGC	4 cut(s)	333, 721, 900, 1698
FokI	GGATG	4 cut(s)	164, 717, 742, 1158
FriOI	GRGCYC	2 cut(s)	153, 1069
Fsp4HI	GCNGC	4 cut(s)	333, 721, 900, 1698
FspBI	CTAG	1 cut(s)	530
GlaI	GCGC	1 cut(s)	1665
GluI	GCNGC	4 cut(s)	333, 721, 900, 1698
GsuI	CTGGAG	1 cut(s)	1315
HaeIII	GGCC	6 cut(s)	75, 549, 641, 1103, 1320, 1434
HapII	CCGG	1 cut(s)	341
HgaI	GACGC	2 cut(s)	54, 929
HhaI	GCGC	1 cut(s)	1666
Hin6I	GCGC	1 cut(s)	1664
HinP1I	GCGC	1 cut(s)	1664
HincII	GTYRAC	1 cut(s)	594
HindII	GTYRAC	1 cut(s)	594
HindIII	AAGCTT	2 cut(s)	1038, 1341
HpaII	CCGG	1 cut(s)	341
HphI	GGTGA	4 cut(s)	367, 878, 1346, 1774
Hpy166II	GTNNAC	3 cut(s)	594, 1633, 1783
Hpy188I	TCNGA	6 cut(s)	274, 749, 883, 1145, 1189, 1692
Hpy188III	TCNNGA	6 cut(s)	52, 626, 702, 1168, 1358, 1774
Hpy8I	GTNNAC	3 cut(s)	594, 1633, 1783
HpyAV	CCTTC	9 cut(s)	140, 191, 195, 652, 758, 835, 1331, 1439, 1632
HpyCH4III	ACNGT	2 cut(s)	790, 1492
HpyCH4IV	ACGT	1 cut(s)	1094
HpyF10VI	GCNNNNNNNGC	2 cut(s)	317, 1706
HpyF3I	CTNAG	5 cut(s)	271, 895, 1405, 1689, 1715
HpySE526I	ACGT	1 cut(s)	1094
HspAI	GCGC	1 cut(s)	1664
Ksp22I	TGATCA	2 cut(s)	48, 121
Kzo9I	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
LmnI	GCTCC	6 cut(s)	156, 209, 269, 329, 1296, 1684
Lsp1109I	GCAGC	4 cut(s)	344, 732, 911, 1684
LweI	GCATC	9 cut(s)	49, 424, 501, 695, 1260, 1353, 1378, 1543, 1675
MaeI	CTAG	1 cut(s)	530
MaeII	ACGT	1 cut(s)	1094
MaeIII	GTNAC	8 cut(s)	80, 623, 656, 784, 1090, 1095, 1421, 1739
MalI	GATC	7 cut(s)	50, 123, 885, 1080, 1142, 1457, 1573
MboI	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
MboII	GAAGA	9 cut(s)	60, 546, 587, 1122, 1454, 1465, 1487, 1517, 1562
MflI	RGATCY	1 cut(s)	1455
MhlI	GDGCHC	3 cut(s)	153, 1069, 1301
MlyI	GAGTC	5 cut(s)	64, 269, 587, 792, 1779
MmeI	TCCRAC	1 cut(s)	307
Mph1103I	ATGCAT	2 cut(s)	42, 710
MroXI	GAANNNNTTC	1 cut(s)	743
MseI	TTAA	6 cut(s)	441, 975, 1181, 1461, 1521, 1790
MslI	CAYNNNNRTG	8 cut(s)	219, 225, 302, 665, 692, 911, 1161, 1329
MspI	CCGG	1 cut(s)	341
MspR9I	CCNGG	4 cut(s)	341, 379, 1294, 1436
Mva1269I	GAATGC	1 cut(s)	1210
MvaI	CCWGG	3 cut(s)	379, 1294, 1436
MvnI	CGCG	1 cut(s)	65
MwoI	GCNNNNNNNGC	2 cut(s)	317, 1706
NciI	CCSGG	1 cut(s)	341
NcoI	CCATGG	1 cut(s)	214
NdeI	CATATG	1 cut(s)	1467
NdeII	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
NlaIV	GGNNCC	2 cut(s)	265, 1686
NmeAIII	GCCGAG	1 cut(s)	841
NmuCI	GTSAC	3 cut(s)	623, 656, 784
NsiI	ATGCAT	2 cut(s)	42, 710
NspI	RCATGY	3 cut(s)	204, 664, 916
PaeI	GCATGC	1 cut(s)	204
PagI	TCATGA	1 cut(s)	1773
PciI	ACATGT	1 cut(s)	912
PcsI	WCGNNNNNNNCGW	1 cut(s)	564
PctI	GAATGC	1 cut(s)	1210
PdmI	GAANNNNTTC	1 cut(s)	743
PfeI	GAWTC	6 cut(s)	541, 878, 1152, 1247, 1283, 1806
PflFI	GACNNNGTC	1 cut(s)	101
PflMI	CCANNNNNTGG	1 cut(s)	378
PfoI	TCCNGGA	1 cut(s)	1292
PkrI	GCNGC	4 cut(s)	334, 722, 901, 1699
PleI	GAGTC	5 cut(s)	63, 269, 586, 791, 1778
PpsI	GAGTC	5 cut(s)	63, 269, 586, 791, 1778
PscI	ACATGT	1 cut(s)	912
PshBI	ATTAAT	1 cut(s)	1521
Psp124BI	GAGCTC	2 cut(s)	153, 1069
Psp1406I	AACGTT	1 cut(s)	1094
Psp6I	CCWGG	3 cut(s)	377, 1292, 1434
PspGI	CCWGG	3 cut(s)	377, 1292, 1434
PspN4I	GGNNCC	2 cut(s)	265, 1686
PspPI	GGNCC	1 cut(s)	1102
PsuI	RGATCY	1 cut(s)	1455
PsyI	GACNNNGTC	1 cut(s)	101
RsaI	GTAC	1 cut(s)	1782
RsaNI	GTAC	1 cut(s)	1781
RseI	CAYNNNNRTG	8 cut(s)	219, 225, 302, 665, 692, 911, 1161, 1329
SacI	GAGCTC	2 cut(s)	153, 1069
SaqAI	TTAA	6 cut(s)	441, 975, 1181, 1461, 1521, 1790
SatI	GCNGC	4 cut(s)	333, 721, 900, 1698
Sau3AI	GATC	7 cut(s)	48, 121, 883, 1078, 1140, 1455, 1571
Sau96I	GGNCC	1 cut(s)	1102
SchI	GAGTC	5 cut(s)	64, 269, 587, 792, 1779
ScrFI	CCNGG	4 cut(s)	341, 379, 1294, 1436
SduI	GDGCHC	3 cut(s)	153, 1069, 1301
SfaNI	GCATC	9 cut(s)	49, 424, 501, 695, 1260, 1353, 1378, 1543, 1675
SfcI	CTRYAG	2 cut(s)	22, 1136
SmiMI	CAYNNNNRTG	8 cut(s)	219, 225, 302, 665, 692, 911, 1161, 1329
SmlI	CTYRAG	3 cut(s)	254, 1068, 1358
SmoI	CTYRAG	3 cut(s)	254, 1068, 1358
SphI	GCATGC	1 cut(s)	204
SsiI	CCGC	4 cut(s)	476, 807, 925, 1391
SspMI	CTAG	1 cut(s)	530
SstI	GAGCTC	2 cut(s)	153, 1069
StyD4I	CCNGG	4 cut(s)	339, 377, 1292, 1434
StyI	CCWWGG	2 cut(s)	214, 1659
TaaI	ACNGT	2 cut(s)	790, 1492
TaiI	ACGT	1 cut(s)	1097
TaqI	TCGA	3 cut(s)	781, 960, 1548
TatI	WGTACW	1 cut(s)	1780
TfiI	GAWTC	6 cut(s)	541, 878, 1152, 1247, 1283, 1806
Tru1I	TTAA	6 cut(s)	441, 975, 1181, 1461, 1521, 1790
Tru9I	TTAA	6 cut(s)	441, 975, 1181, 1461, 1521, 1790
TscAI	CASTG	4 cut(s)	248, 474, 694, 793
TseFI	GTSAC	3 cut(s)	623, 656, 784
TseI	GCWGC	4 cut(s)	332, 720, 899, 1697
Tsp45I	GTSAC	3 cut(s)	623, 656, 784
TspGWI	ACGGA	5 cut(s)	268, 854, 1259, 1650, 1818
TspRI	CASTG	4 cut(s)	248, 474, 694, 793
Tth111I	GACNNNGTC	1 cut(s)	101
Van91I	CCANNNNNTGG	1 cut(s)	378
VspI	ATTAAT	1 cut(s)	1521
XapI	RAATTY	6 cut(s)	382, 846, 1183, 1257, 1599, 1815
XceI	RCATGY	3 cut(s)	204, 664, 916
XcmI	CCANNNNNNNNNTGG	1 cut(s)	218
XmnI	GAANNNNTTC	1 cut(s)	743
XspI	CTAG	1 cut(s)	530
Zsp2I	ATGCAT	2 cut(s)	42, 710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.