Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0015256

Physical Location & Seq

Genomic Coordinates Reverse (-)

194567 .. 196906

Gene Structure 2340 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG000800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGAAATCAATATACACAAGCTACAGAAACAGGAGTATGCATCATGTGATCAGGAGTCGGTCCGCGTCTTCTGGCCTTTGCTGCATCAAAATCAAAGACTTGGTCTCTAAAGGATTATATGATCAAACCCTTCAACTTTACAAAGACGAGCTCCATTCTTATGGCCTCCTCCACGCAAACACCTCCATCCTTCCTTCAATCATCAAAGCATGCTCCTCCCACCATGGGCATGGGCTTCAACTTCACTGCATGGCTCTCAAGTCAGGCTCCAACTCAGACTCCGTTGTATCCAATTCTCTCATCTCCATGTATGCCAAACTCGCACTTGTTGGAGCAGCACGCCGGGTGTTTGATGAAATGCCTGAAAGAGACACCATCACCTGGAATTCCATGATAAATTGCTACATACAAAATGGGCATCTTGCAAAAGCACTTGATGTGCTTAAACAAATGTATTTGAATGGTTTTACACTGAAAGCGGAGTTGATTGCCAGCATCATATCAGTTTGTGCAAGGACAAGAAAGTTTAGACTAGGGAGACAGATTCATGGCCTCCTTGTTGTCCATGACGAGATTGAAGAGTCGGTGTTCTTGTCAACGGCTCTGCTTGATTTGTATATGAGGTGTCACGAAACTTTGATGGCCTTCCATGTTTTCTGTCACATGCAAGTGAAAAATGAAGTCTCTTGGACTGCCATGATTTCGGGATGCATTGCTAATCGCAGCTATGGGATGGCAATGCATTGCTTCCGGGAAATGCAGGTTGAAGGATTGAAACCCAATCGAGTCACTATGCTTGCCATTTTACCAGCTTGTGCCGAGTTGGGAGACATAGGACATGGGAAGGAAATTCATGCCTACACTTTTCGTCATGGGTTTGAATCAGATCACCATTGCTCAGCAGCTCTCATACACATGTACTGCAAGCGCGGGAAAGAATTGCGTCCTGCCAAGCTAATTTTCGACAAGGTATCTCTTAAAGATGTTGTTATGTGGAGTTTGATGATTGGGAGTTATTCTCAATGTGGGGATTTCGTGAAAGCTTTGCAACTTTTTAGTCAAATGCGAGCTCAAGGAATTGATCCAAACTCTGTAACGTTACTGGCCCTCATTTCCGCCTGCACCACACTTTCTTCTCTACAGATCGGATGTGGAATCCATAGCTATGTCTTGAAATCTGGGTTAAATTCTGACATTTTCATTGGGAATGCACTTATCAATATGTATGCAAAGTGTGGTTGTCTCACGGATTCACATGAAATTTTCAAGGAGATGCCAAGTATAGATTCTGTCTCCTGGAGCACAATGATTGAGAGCTATGGCCTTCATGGTCGTGGTAATGAAGCTTTGAAACTCTTTCTTGAGATGCAAGATAGAGGGATAGAGCCTGATGCGGTCGCTTTCCTCTCAGTTTTATCTGCTTGTAACCATGCTGGCCTGGTGGAAGAAGGCAAGAAGATCTTTAAACTTATGAGAGAAGATAGTAAAATAACTGTATCTTTAGAGCATTATGCTTGCTATATTAATCTTCTTGGAAAGTTTGGAAAGCTCGAAGATGCTTGTGAGATTGTACGATCAATGCCCATGAAACCAAGTAGTAGAATTTGGAGTTCTTTGGTTACAGCTTGCAAGGTTCACGGAAGGTTAGAAATAGCAGAATCCTTGGCGCATCATCTTGTTAGAAAGGAGCCTCAGAACGCTGCCAACTATGCCTTACTGAGCATGGTTCATGCTGAAGCTGGTAACTGGCTTGGCGTGGAGGAGGTGAGGAGAGTCATGAGAGTACACAGATTAAGGAAATGCTACGGATTCAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

607

Amino Acids

67.92

Weight (kDa)

8.74

Isoelectric Point (pI)

42.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	123 - 156	7.5e-07	PPR repeat family
PPR	PF01535	126 - 155	4.2e-07	PPR repeat
PPR_2	PF13041	226 - 273	1.1e-08	PPR repeat family
PPR_2	PF13041	327 - 374	1.1e-10	PPR repeat family
PPR	PF01535	330 - 360	1.3e-06	PPR repeat
PPR_2	PF13041	429 - 475	1.3e-10	PPR repeat family
PPR	PF01535	431 - 461	5.7e-08	PPR repeat
E_motif	PF20431	546 - 607	2.4e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Orthologous Genes (Group: OG0015256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31070 AT4G31070
fragaria_vesca	FvH4_4g00140
malus_domestica	MD04G1001600.v1.1
prunus_persica	Prupe.1G001600_v2.0.a1
pyrus_communis	pycom04g00220
rosa_chinensis	RchiOBHm_Chr4g0384761
rosa_laevigata	RLG00000010274
rosa_roxburghii	Rroxscaffold_5G00332820
rosa_rugosa	Rorug03G0297500
rosa_samantha	Rh4AG001000 Rh4BG000900 Rh4CG000800 Rh4DG000900
rosa_wichuraiana	Rw0G021980 Rw4G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	751
AccB7I	CCANNNNNTGG	1 cut(s)	381
AccII	CGCG	2 cut(s)	65, 930
AciI	CCGC	5 cut(s)	63, 479, 930, 1116, 1394
AclI	AACGTT	1 cut(s)	1097
AclWI	GGATC	1 cut(s)	1076
AcsI	RAATTY	6 cut(s)	385, 849, 1186, 1260, 1602, 1818
AcuI	CTGAAG	1 cut(s)	1755
AfaI	GTAC	3 cut(s)	920, 1572, 1785
AfiI	CCNNNNNNNGG	2 cut(s)	225, 381
AflIII	ACRYGT	1 cut(s)	915
AjnI	CCWGG	3 cut(s)	380, 1295, 1437
AjuI	GAANNNNNNNTTGG	4 cut(s)	944, 976, 1270, 1302
Alw21I	GWGCWC	3 cut(s)	153, 1072, 1304
Alw26I	GTCTC	7 cut(s)	109, 363, 532, 688, 822, 1247, 1297
AlwI	GGATC	1 cut(s)	1076
AoxI	GGCC	7 cut(s)	73, 163, 550, 642, 1104, 1321, 1435
ApeKI	GCWGC	5 cut(s)	81, 335, 723, 902, 1700
ApoI	RAATTY	6 cut(s)	385, 849, 1186, 1260, 1602, 1818
ArsI	GACNNNNNNTTYG	2 cut(s)	87, 119
AseI	ATTAAT	1 cut(s)	1524
AspLEI	GCGC	2 cut(s)	930, 1669
AspS9I	GGNCC	2 cut(s)	60, 1105
AsuC2I	CCSGG	2 cut(s)	344, 752
AsuHPI	GGTGA	3 cut(s)	370, 881, 1777
AvaII	GGWCC	1 cut(s)	60
BanII	GRGCYC	2 cut(s)	153, 1072
BbsI	GAAGAC	1 cut(s)	60
Bbv12I	GWGCWC	3 cut(s)	153, 1072, 1304
BbvI	GCAGC	5 cut(s)	68, 347, 735, 914, 1687
BccI	CCATC	4 cut(s)	194, 383, 634, 727
BceAI	ACGGC	1 cut(s)	615
BciT130I	CCWGG	3 cut(s)	382, 1297, 1439
BciVI	GTATCC	1 cut(s)	298
BclI	TGATCA	2 cut(s)	48, 121
BcnI	CCSGG	2 cut(s)	344, 752
BcoDI	GTCTC	7 cut(s)	109, 363, 532, 688, 822, 1247, 1297
BfaI	CTAG	1 cut(s)	533
BfmI	CTRYAG	2 cut(s)	22, 1139
BfuAI	ACCTGC	1 cut(s)	751
BfuI	GTATCC	1 cut(s)	298
BglII	AGATCT	1 cut(s)	1458
BisI	GCNGC	5 cut(s)	82, 336, 724, 903, 1701
BlpI	GCTNAGC	1 cut(s)	898
BlsI	GCNGC	5 cut(s)	83, 337, 725, 904, 1702
Bme1390I	CCNGG	5 cut(s)	344, 382, 752, 1297, 1439
Bme18I	GGWCC	1 cut(s)	60
BmgT120I	GGNCC	2 cut(s)	60, 1105
BmiI	GGNNCC	2 cut(s)	268, 1689
BmrFI	CCNGG	5 cut(s)	344, 382, 752, 1297, 1439
BpiI	GAAGAC	1 cut(s)	60
BplI	GAGNNNNNCTC	2 cut(s)	1003, 1035
BpmI	CTGGAG	1 cut(s)	1318
Bpu1102I	GCTNAGC	1 cut(s)	898
BpuEI	CTTGAG	3 cut(s)	242, 1056, 1382
BpuMI	CCSGG	2 cut(s)	344, 752
BsaI	GGTCTC	1 cut(s)	109
BsaJI	CCNNGG	2 cut(s)	223, 1662
BsaXI	ACNNNNNCTCC	2 cut(s)	263, 293
Bsc4I	CCNNNNNNNGG	2 cut(s)	225, 381
Bse1I	ACTGG	2 cut(s)	1107, 1751
Bse3DI	GCAATG	4 cut(s)	711, 742, 744, 892
BseBI	CCWGG	3 cut(s)	382, 1297, 1439
BseDI	CCNNGG	2 cut(s)	223, 1662
BseGI	GGATG	4 cut(s)	186, 713, 738, 1154
BseLI	CCNNNNNNNGG	2 cut(s)	225, 381
BseMI	GCAATG	4 cut(s)	711, 742, 744, 892
BseMII	CTCAG	5 cut(s)	288, 912, 1422, 1706, 1709
BseNI	ACTGG	2 cut(s)	1107, 1751
BseRI	GAGGAG	4 cut(s)	158, 205, 1775, 1783
BseXI	GCAGC	5 cut(s)	68, 347, 735, 914, 1687
BsgI	GTGCAG	1 cut(s)	1105
Bsh1236I	CGCG	2 cut(s)	65, 930
Bsh1285I	CGRYCG	1 cut(s)	1398
BshFI	GGCC	7 cut(s)	75, 165, 552, 644, 1106, 1323, 1437
BsiEI	CGRYCG	1 cut(s)	1398
BsiHKAI	GWGCWC	3 cut(s)	153, 1072, 1304
BsiSI	CCGG	2 cut(s)	343, 751
BslI	CCNNNNNNNGG	2 cut(s)	225, 381
BsmAI	GTCTC	7 cut(s)	109, 363, 532, 688, 822, 1247, 1297
BsmI	GAATGC	1 cut(s)	1213
BsnI	GGCC	7 cut(s)	75, 165, 552, 644, 1106, 1323, 1437
Bso31I	GGTCTC	1 cut(s)	109
Bsp1286I	GDGCHC	3 cut(s)	153, 1072, 1304
Bsp143I	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
Bsp1720I	GCTNAGC	1 cut(s)	898
Bsp19I	CCATGG	1 cut(s)	223
BspACI	CCGC	5 cut(s)	63, 479, 930, 1116, 1394
BspANI	GGCC	7 cut(s)	75, 165, 552, 644, 1106, 1323, 1437
BspCNI	CTCAG	5 cut(s)	287, 911, 1421, 1705, 1710
BspFNI	CGCG	2 cut(s)	65, 930
BspHI	TCATGA	1 cut(s)	1776
BspLI	GGNNCC	2 cut(s)	268, 1689
BspMI	ACCTGC	1 cut(s)	751
BspPI	GGATC	1 cut(s)	1076
BspTNI	GGTCTC	1 cut(s)	109
BsrDI	GCAATG	4 cut(s)	711, 742, 744, 892
BsrI	ACTGG	2 cut(s)	1107, 1751
BssECI	CCNNGG	2 cut(s)	223, 1662
BssMI	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
BssT1I	CCWWGG	2 cut(s)	223, 1662
Bst2UI	CCWGG	3 cut(s)	382, 1297, 1439
Bst4CI	ACNGT	1 cut(s)	1495
Bst6I	CTCTTC	1 cut(s)	573
BstDEI	CTNAG	5 cut(s)	274, 898, 1408, 1692, 1718
BstDSI	CCRYGG	1 cut(s)	223
BstF5I	GGATG	4 cut(s)	186, 713, 738, 1154
BstFNI	CGCG	2 cut(s)	65, 930
BstHHI	GCGC	2 cut(s)	930, 1669
BstKTI	GATC	7 cut(s)	51, 124, 889, 1084, 1146, 1461, 1577
BstMAI	GTCTC	7 cut(s)	109, 363, 532, 688, 822, 1247, 1297
BstMBI	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
BstMCI	CGRYCG	1 cut(s)	1398
BstMWI	GCNNNNNNNGC	3 cut(s)	81, 320, 1709
BstNI	CCWGG	3 cut(s)	382, 1297, 1439
BstNSI	RCATGY	3 cut(s)	213, 667, 919
BstSCI	CCNGG	5 cut(s)	342, 380, 750, 1295, 1437
BstSFI	CTRYAG	2 cut(s)	22, 1139
BstUI	CGCG	2 cut(s)	65, 930
BstV1I	GCAGC	5 cut(s)	68, 347, 735, 914, 1687
BstV2I	GAAGAC	1 cut(s)	60
BstX2I	RGATCY	1 cut(s)	1458
BstXI	CCANNNNNNTGG	2 cut(s)	161, 230
BstYI	RGATCY	1 cut(s)	1458
BsuI	GTATCC	1 cut(s)	298
BsuRI	GGCC	7 cut(s)	75, 165, 552, 644, 1106, 1323, 1437
BtgI	CCRYGG	1 cut(s)	223
BtsCI	GGATG	4 cut(s)	186, 713, 738, 1154
BtsI	GCAGTG	1 cut(s)	244
BtsIMutI	CAGTG	2 cut(s)	244, 470
BveI	ACCTGC	1 cut(s)	751
CciI	TCATGA	1 cut(s)	1776
CfoI	GCGC	2 cut(s)	930, 1669
Cfr13I	GGNCC	2 cut(s)	60, 1105
CpoI	CGGWCCG	1 cut(s)	60
CseI	GACGC	2 cut(s)	54, 932
Csp6I	GTAC	3 cut(s)	919, 1571, 1784
CspI	CGGWCCG	1 cut(s)	60
CviQI	GTAC	3 cut(s)	919, 1571, 1784
DdeI	CTNAG	5 cut(s)	274, 898, 1408, 1692, 1718
DpnI	GATC	7 cut(s)	50, 123, 888, 1083, 1145, 1460, 1576
DpnII	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
DraI	TTTAAA	1 cut(s)	1465
Eam1104I	CTCTTC	1 cut(s)	573
EarI	CTCTTC	1 cut(s)	573
EciI	GGCGGA	1 cut(s)	1105
Ecl136II	GAGCTC	2 cut(s)	151, 1070
Eco130I	CCWWGG	2 cut(s)	223, 1662
Eco24I	GRGCYC	2 cut(s)	153, 1072
Eco31I	GGTCTC	1 cut(s)	109
Eco47I	GGWCC	1 cut(s)	60
Eco53kI	GAGCTC	2 cut(s)	151, 1070
Eco57I	CTGAAG	1 cut(s)	1755
EcoICRI	GAGCTC	2 cut(s)	151, 1070
EcoRI	GAATTC	1 cut(s)	385
EcoRII	CCWGG	3 cut(s)	380, 1295, 1437
EcoT14I	CCWWGG	2 cut(s)	223, 1662
EcoT22I	ATGCAT	3 cut(s)	42, 713, 744
EcoT38I	GRGCYC	2 cut(s)	153, 1072
ErhI	CCWWGG	2 cut(s)	223, 1662
FalI	AAGNNNNNCTT	2 cut(s)	1445, 1477
FauI	CCCGC	1 cut(s)	923
FbaI	TGATCA	2 cut(s)	48, 121
Fnu4HI	GCNGC	5 cut(s)	82, 336, 724, 903, 1701
FokI	GGATG	4 cut(s)	173, 720, 745, 1161
FriOI	GRGCYC	2 cut(s)	153, 1072
Fsp4HI	GCNGC	5 cut(s)	82, 336, 724, 903, 1701
FspBI	CTAG	1 cut(s)	533
GlaI	GCGC	2 cut(s)	929, 1668
GluI	GCNGC	5 cut(s)	82, 336, 724, 903, 1701
GsuI	CTGGAG	1 cut(s)	1318
HaeIII	GGCC	7 cut(s)	75, 165, 552, 644, 1106, 1323, 1437
HapII	CCGG	2 cut(s)	343, 751
HgaI	GACGC	2 cut(s)	54, 932
HhaI	GCGC	2 cut(s)	930, 1669
Hin6I	GCGC	2 cut(s)	928, 1667
HinP1I	GCGC	2 cut(s)	928, 1667
HincII	GTYRAC	1 cut(s)	597
HindII	GTYRAC	1 cut(s)	597
HindIII	AAGCTT	2 cut(s)	1041, 1344
HpaII	CCGG	2 cut(s)	343, 751
HphI	GGTGA	3 cut(s)	370, 881, 1777
Hpy166II	GTNNAC	3 cut(s)	597, 1636, 1786
Hpy188I	TCNGA	5 cut(s)	277, 886, 1148, 1192, 1695
Hpy188III	TCNNGA	7 cut(s)	52, 629, 705, 1036, 1171, 1361, 1777
Hpy8I	GTNNAC	3 cut(s)	597, 1636, 1786
HpyAV	CCTTC	9 cut(s)	140, 200, 204, 655, 761, 838, 1334, 1442, 1635
HpyCH4III	ACNGT	1 cut(s)	1495
HpyCH4IV	ACGT	1 cut(s)	1097
HpyF10VI	GCNNNNNNNGC	3 cut(s)	81, 320, 1709
HpyF3I	CTNAG	5 cut(s)	274, 898, 1408, 1692, 1718
HpySE526I	ACGT	1 cut(s)	1097
HspAI	GCGC	2 cut(s)	928, 1667
Ksp22I	TGATCA	2 cut(s)	48, 121
Kzo9I	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
LmnI	GCTCC	6 cut(s)	156, 218, 272, 332, 1299, 1687
Lsp1109I	GCAGC	5 cut(s)	68, 347, 735, 914, 1687
MaeI	CTAG	1 cut(s)	533
MaeII	ACGT	1 cut(s)	1097
MaeIII	GTNAC	8 cut(s)	626, 659, 787, 1093, 1098, 1424, 1618, 1742
MalI	GATC	7 cut(s)	50, 123, 888, 1083, 1145, 1460, 1576
MboI	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
MboII	GAAGA	8 cut(s)	60, 590, 1125, 1457, 1468, 1490, 1520, 1565
MflI	RGATCY	1 cut(s)	1458
MhlI	GDGCHC	3 cut(s)	153, 1072, 1304
MlyI	GAGTC	5 cut(s)	64, 272, 590, 795, 1782
MmeI	TCCRAC	2 cut(s)	294, 310
Mph1103I	ATGCAT	3 cut(s)	42, 713, 744
MseI	TTAA	6 cut(s)	444, 978, 1184, 1464, 1524, 1793
MslI	CAYNNNNRTG	7 cut(s)	159, 228, 305, 668, 914, 1164, 1332
MspI	CCGG	2 cut(s)	343, 751
MspR9I	CCNGG	5 cut(s)	344, 382, 752, 1297, 1439
Mva1269I	GAATGC	1 cut(s)	1213
MvaI	CCWGG	3 cut(s)	382, 1297, 1439
MvnI	CGCG	2 cut(s)	65, 930
MwoI	GCNNNNNNNGC	3 cut(s)	81, 320, 1709
NciI	CCSGG	2 cut(s)	344, 752
NcoI	CCATGG	1 cut(s)	223
NdeII	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
NlaIV	GGNNCC	2 cut(s)	268, 1689
NmeAIII	GCCGAG	1 cut(s)	844
NmuCI	GTSAC	3 cut(s)	626, 659, 787
NsiI	ATGCAT	3 cut(s)	42, 713, 744
NspI	RCATGY	3 cut(s)	213, 667, 919
PaeI	GCATGC	1 cut(s)	213
PagI	TCATGA	1 cut(s)	1776
PciI	ACATGT	1 cut(s)	915
PctI	GAATGC	1 cut(s)	1213
PfeI	GAWTC	7 cut(s)	544, 881, 1155, 1250, 1286, 1658, 1809
PflFI	GACNNNGTC	1 cut(s)	101
PflMI	CCANNNNNTGG	1 cut(s)	381
PfoI	TCCNGGA	2 cut(s)	750, 1295
PkrI	GCNGC	5 cut(s)	83, 337, 725, 904, 1702
PleI	GAGTC	5 cut(s)	63, 272, 589, 794, 1781
PpsI	GAGTC	5 cut(s)	63, 272, 589, 794, 1781
PscI	ACATGT	1 cut(s)	915
PshBI	ATTAAT	1 cut(s)	1524
Psp124BI	GAGCTC	2 cut(s)	153, 1072
Psp1406I	AACGTT	1 cut(s)	1097
Psp6I	CCWGG	3 cut(s)	380, 1295, 1437
PspGI	CCWGG	3 cut(s)	380, 1295, 1437
PspN4I	GGNNCC	2 cut(s)	268, 1689
PspPI	GGNCC	2 cut(s)	60, 1105
PsuI	RGATCY	1 cut(s)	1458
PsyI	GACNNNGTC	1 cut(s)	101
RsaI	GTAC	3 cut(s)	920, 1572, 1785
RsaNI	GTAC	3 cut(s)	919, 1571, 1784
RseI	CAYNNNNRTG	7 cut(s)	159, 228, 305, 668, 914, 1164, 1332
Rsr2I	CGGWCCG	1 cut(s)	60
RsrII	CGGWCCG	1 cut(s)	60
SacI	GAGCTC	2 cut(s)	153, 1072
SaqAI	TTAA	6 cut(s)	444, 978, 1184, 1464, 1524, 1793
SatI	GCNGC	5 cut(s)	82, 336, 724, 903, 1701
Sau3AI	GATC	7 cut(s)	48, 121, 886, 1081, 1143, 1458, 1574
Sau96I	GGNCC	2 cut(s)	60, 1105
SchI	GAGTC	5 cut(s)	64, 272, 590, 795, 1782
ScrFI	CCNGG	5 cut(s)	344, 382, 752, 1297, 1439
SduI	GDGCHC	3 cut(s)	153, 1072, 1304
SfcI	CTRYAG	2 cut(s)	22, 1139
SinI	GGWCC	1 cut(s)	60
SmiMI	CAYNNNNRTG	7 cut(s)	159, 228, 305, 668, 914, 1164, 1332
SmlI	CTYRAG	3 cut(s)	257, 1071, 1361
SmoI	CTYRAG	3 cut(s)	257, 1071, 1361
SphI	GCATGC	1 cut(s)	213
SsiI	CCGC	5 cut(s)	63, 479, 930, 1116, 1394
SspMI	CTAG	1 cut(s)	533
SstI	GAGCTC	2 cut(s)	153, 1072
StyD4I	CCNGG	5 cut(s)	342, 380, 750, 1295, 1437
StyI	CCWWGG	2 cut(s)	223, 1662
TaaI	ACNGT	1 cut(s)	1495
TaiI	ACGT	1 cut(s)	1100
TaqI	TCGA	3 cut(s)	784, 963, 1551
TaqII	GACCGA	1 cut(s)	48
TatI	WGTACW	2 cut(s)	918, 1783
TfiI	GAWTC	7 cut(s)	544, 881, 1155, 1250, 1286, 1658, 1809
Tru1I	TTAA	6 cut(s)	444, 978, 1184, 1464, 1524, 1793
Tru9I	TTAA	6 cut(s)	444, 978, 1184, 1464, 1524, 1793
TscAI	CASTG	2 cut(s)	251, 477
TseFI	GTSAC	3 cut(s)	626, 659, 787
TseI	GCWGC	5 cut(s)	81, 335, 723, 902, 1700
Tsp45I	GTSAC	3 cut(s)	626, 659, 787
TspGWI	ACGGA	4 cut(s)	271, 1262, 1653, 1821
TspRI	CASTG	2 cut(s)	251, 477
Tth111I	GACNNNGTC	1 cut(s)	101
Van91I	CCANNNNNTGG	1 cut(s)	381
VpaK11BI	GGWCC	1 cut(s)	60
VspI	ATTAAT	1 cut(s)	1524
XapI	RAATTY	6 cut(s)	385, 849, 1186, 1260, 1602, 1818
XceI	RCATGY	3 cut(s)	213, 667, 919
XcmI	CCANNNNNNNNNTGG	1 cut(s)	227
XspI	CTAG	1 cut(s)	533
Zsp2I	ATGCAT	3 cut(s)	42, 713, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.