Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0015256

Physical Location & Seq

Genomic Coordinates Reverse (-)

235756 .. 238090

Gene Structure 2335 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG000900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGAAATCAATATACACAAGCTACAGAAACAGGAGTATGCATCATGTGATCAGGAGTCGGTTCGCGTCTTCTGGCCTTTGTTACATCAAAATCAAAGACTTGGTCTCTAAAGGATTATATGATCAAACCCTTCAACTTTACAAAGACGAGCTCCATTCTTATGGCCTCCTCCACGCAAACACCTCCATCCTTCCTTCAATCATCAAAGCATGCTCCTCCCACCATGGGCATGGGCATGGGCTTCAACTTCACTGCATGGCTCTCAAGTCAGGCTCCATCTCAGACTCCGTTGTATCCAATTCTCTCATCTCCATGTATGCCAAACTCGCACTCGTTGGAGCAGCACGCCGGGTGTTTGATGAAATGCCTGAAAGAGACACCATCACCTGGAATTCCATGATGAATTGCTACATACAAAATGGGCATGTTGCAAAAGCACTTGATGTGCTTAAACAAATGTATTTGAATGGTTTTACACTGAAAGCGGAGTTGATTGCCAGCATCATATCAGTTTGTGCAAGGACAAGAAAGTTTAGACTAGGGAGACAGATTCATGGCCTCCTTGTCGTCCATGACGAGATTGAAGAGTCGGTGTTCTTGTCAACGGCTCTGCTTGATTTGTATATGAGGTGTCACGAAACTTTGATGGCCTTCCATGTTTTCTGTCACATGCAAGTGAAAAATGAAGTCTCTTGGACTGCCATGATTTCGGGATGCATTGCTAATCGCAGCTATGGGATGGCAATGAATTGCTTCCGGGAAATGCAGGTTGAAGGATTGAAACCCAATCGAGTCACTGTGCTTGCCATTTTACCCGCTTGTGCCGAGTTGGGAGACATAGGACATGGGAAGGAAATTCATGCCTATACTTTTCGTCATGGGTTTGAATCAGATCACCATTGCTCAGCAGCTCTCATACACATGTATTGCAAGCGCGGGAAAGAATTGCGTCCTGCCAAGCTAATTTTCGACAAGGTATCTCTTAAAGATGTTGTTATGTGGAGTTTGATGATTGGGAGTTATTCTCAATGTGGGGATAGCGTGAAAGCTTTGGAACTTTTTAGCCAAATGCGAGCTCAAGGAATTGATCCAAACTCTGTAACGTTACTGGCCCTCATTTCCGCCTGCACCTCACTTTCTTCTCTACAAATCGGATGTGGAGTCCATAGCTATGTCTTGAAATCTGGGTTAAATTCTGACATTTTCATTGGGAATGCACTTATCAATATGTATGCAAAGTGTGGTTGTCTCACGGATTCACATGAAATTTTCAAGGAGATGCCAAGTATAGATTCTGTCTCCTGGAGCACAATGATTGAGAGCTATGGCCTTCATGGTCGTGGTGATGAAGCTTTGAAACTCTTTCTTGAGATGCAAGATAGAGGGATAGAGCCTGATGCGGTCGCTTTCCTCTCAGTTTTATCTGCTTGTAACCATGCTGGCCTGGTGGAAGAAGGTAAGAAGATCTTTAAACATATGAGAGAAGATAGTAAAATAACTGTATCTTTAGAGCATTATGCTTGCTATATTAATCTTCTTGGAAAGTTTGGAAAGCTCGAAGATGCTTGTGAGATTGTACGATCAATGCCCATGAAACCAAGTAGTAGAATTTGGAGTTCTTTGGTTACAGCTTGCAAGGTTCACGGAAGGTTAGAAATAGCAGAATCCTTGGCGCATCATCTTGTTAGAAAGGAGCCTCAGAACGCTGCCAACTATGCCTTACTGAGCATGGTTCATGCTGAAGTTGGTAACTGGCTTGGTGTGGAGGAGGTGAGGAGAGTCATGAGAGTACACAGATTAAGGAAATGCTACGGATTCAGCAGAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

609

Amino Acids

68.15

Weight (kDa)

8.64

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	125 - 158	1e-06	PPR repeat family
PPR	PF01535	128 - 157	1e-06	PPR repeat
PPR_2	PF13041	228 - 275	9.2e-09	PPR repeat family
PPR_2	PF13041	329 - 376	4.1e-10	PPR repeat family
PPR	PF01535	332 - 362	1.6e-06	PPR repeat
PPR_2	PF13041	431 - 477	1e-10	PPR repeat family
PPR	PF01535	433 - 463	1.3e-08	PPR repeat
E_motif	PF20431	548 - 609	6e-09	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31070 AT4G31070
fragaria_vesca	FvH4_4g00140
malus_domestica	MD04G1001600.v1.1
prunus_persica	Prupe.1G001600_v2.0.a1
pyrus_communis	pycom04g00220
rosa_chinensis	RchiOBHm_Chr4g0384761
rosa_laevigata	RLG00000010274
rosa_roxburghii	Rroxscaffold_5G00332820
rosa_rugosa	Rorug03G0297500
rosa_samantha	Rh4AG001000 Rh4BG000900 Rh4CG000800 Rh4DG000900
rosa_wichuraiana	Rw0G021980 Rw4G000790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	757
AccB7I	CCANNNNNTGG	1 cut(s)	387
AccII	CGCG	2 cut(s)	65, 936
AciI	CCGC	5 cut(s)	485, 816, 936, 1122, 1400
AclI	AACGTT	1 cut(s)	1103
AclWI	GGATC	1 cut(s)	1082
AcsI	RAATTY	6 cut(s)	391, 855, 1192, 1266, 1608, 1824
AcuI	CTGAAG	1 cut(s)	1761
AfaI	GTAC	2 cut(s)	1578, 1791
AfiI	CCNNNNNNNGG	2 cut(s)	225, 387
AflIII	ACRYGT	1 cut(s)	921
AjnI	CCWGG	3 cut(s)	386, 1301, 1443
AjuI	GAANNNNNNNTTGG	4 cut(s)	950, 982, 1276, 1308
Alw21I	GWGCWC	3 cut(s)	153, 1078, 1310
Alw26I	GTCTC	7 cut(s)	109, 369, 538, 694, 828, 1253, 1303
AlwI	GGATC	1 cut(s)	1082
AoxI	GGCC	7 cut(s)	73, 163, 556, 648, 1110, 1327, 1441
ApeKI	GCWGC	4 cut(s)	341, 729, 908, 1706
ApoI	RAATTY	6 cut(s)	391, 855, 1192, 1266, 1608, 1824
ArsI	GACNNNNNNTTYG	2 cut(s)	87, 119
AseI	ATTAAT	1 cut(s)	1530
Asp700I	GAANNNNTTC	1 cut(s)	752
AspLEI	GCGC	2 cut(s)	936, 1675
AspS9I	GGNCC	1 cut(s)	1111
AsuC2I	CCSGG	2 cut(s)	350, 758
AsuHPI	GGTGA	4 cut(s)	376, 887, 1355, 1783
BanII	GRGCYC	2 cut(s)	153, 1078
BbsI	GAAGAC	1 cut(s)	60
Bbv12I	GWGCWC	3 cut(s)	153, 1078, 1310
BbvI	GCAGC	4 cut(s)	353, 741, 920, 1693
BccI	CCATC	5 cut(s)	194, 284, 389, 640, 733
BceAI	ACGGC	1 cut(s)	621
BciT130I	CCWGG	3 cut(s)	388, 1303, 1445
BciVI	GTATCC	1 cut(s)	304
BclI	TGATCA	2 cut(s)	48, 121
BcnI	CCSGG	2 cut(s)	350, 758
BcoDI	GTCTC	7 cut(s)	109, 369, 538, 694, 828, 1253, 1303
BfaI	CTAG	1 cut(s)	539
BfmI	CTRYAG	1 cut(s)	22
BfuAI	ACCTGC	1 cut(s)	757
BfuI	GTATCC	1 cut(s)	304
BglII	AGATCT	1 cut(s)	1464
BisI	GCNGC	4 cut(s)	342, 730, 909, 1707
BlpI	GCTNAGC	1 cut(s)	904
BlsI	GCNGC	4 cut(s)	343, 731, 910, 1708
Bme1390I	CCNGG	5 cut(s)	350, 388, 758, 1303, 1445
BmgT120I	GGNCC	1 cut(s)	1111
BmiI	GGNNCC	2 cut(s)	274, 1695
BmrFI	CCNGG	5 cut(s)	350, 388, 758, 1303, 1445
BmsI	GCATC	8 cut(s)	49, 510, 704, 1269, 1362, 1387, 1552, 1684
BpiI	GAAGAC	1 cut(s)	60
BplI	GAGNNNNNCTC	2 cut(s)	1009, 1041
BpmI	CTGGAG	1 cut(s)	1324
Bpu1102I	GCTNAGC	1 cut(s)	904
BpuEI	CTTGAG	3 cut(s)	248, 1062, 1388
BpuMI	CCSGG	2 cut(s)	350, 758
BsaI	GGTCTC	1 cut(s)	109
BsaJI	CCNNGG	2 cut(s)	223, 1668
Bsc4I	CCNNNNNNNGG	2 cut(s)	225, 387
Bse1I	ACTGG	2 cut(s)	1113, 1757
Bse3DI	GCAATG	3 cut(s)	717, 750, 898
BseBI	CCWGG	3 cut(s)	388, 1303, 1445
BseDI	CCNNGG	2 cut(s)	223, 1668
BseGI	GGATG	4 cut(s)	186, 719, 744, 1160
BseLI	CCNNNNNNNGG	2 cut(s)	225, 387
BseMI	GCAATG	3 cut(s)	717, 750, 898
BseMII	CTCAG	5 cut(s)	294, 918, 1428, 1712, 1715
BseNI	ACTGG	2 cut(s)	1113, 1757
BseRI	GAGGAG	4 cut(s)	158, 205, 1781, 1789
BseXI	GCAGC	4 cut(s)	353, 741, 920, 1693
BsgI	GTGCAG	1 cut(s)	1111
Bsh1236I	CGCG	2 cut(s)	65, 936
Bsh1285I	CGRYCG	1 cut(s)	1404
BshFI	GGCC	7 cut(s)	75, 165, 558, 650, 1112, 1329, 1443
BsiEI	CGRYCG	1 cut(s)	1404
BsiHKAI	GWGCWC	3 cut(s)	153, 1078, 1310
BsiSI	CCGG	2 cut(s)	349, 757
BslI	CCNNNNNNNGG	2 cut(s)	225, 387
BsmAI	GTCTC	7 cut(s)	109, 369, 538, 694, 828, 1253, 1303
BsmI	GAATGC	1 cut(s)	1219
BsnI	GGCC	7 cut(s)	75, 165, 558, 650, 1112, 1329, 1443
Bso31I	GGTCTC	1 cut(s)	109
Bsp1286I	GDGCHC	3 cut(s)	153, 1078, 1310
Bsp143I	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
Bsp1720I	GCTNAGC	1 cut(s)	904
Bsp19I	CCATGG	1 cut(s)	223
BspACI	CCGC	5 cut(s)	485, 816, 936, 1122, 1400
BspANI	GGCC	7 cut(s)	75, 165, 558, 650, 1112, 1329, 1443
BspCNI	CTCAG	5 cut(s)	293, 917, 1427, 1711, 1716
BspFNI	CGCG	2 cut(s)	65, 936
BspHI	TCATGA	1 cut(s)	1782
BspLI	GGNNCC	2 cut(s)	274, 1695
BspMI	ACCTGC	1 cut(s)	757
BspPI	GGATC	1 cut(s)	1082
BspTNI	GGTCTC	1 cut(s)	109
BsrDI	GCAATG	3 cut(s)	717, 750, 898
BsrI	ACTGG	2 cut(s)	1113, 1757
BssECI	CCNNGG	2 cut(s)	223, 1668
BssMI	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
BssT1I	CCWWGG	2 cut(s)	223, 1668
Bst2UI	CCWGG	3 cut(s)	388, 1303, 1445
Bst4CI	ACNGT	2 cut(s)	799, 1501
Bst6I	CTCTTC	1 cut(s)	579
BstDEI	CTNAG	5 cut(s)	280, 904, 1414, 1698, 1724
BstDSI	CCRYGG	1 cut(s)	223
BstF5I	GGATG	4 cut(s)	186, 719, 744, 1160
BstFNI	CGCG	2 cut(s)	65, 936
BstHHI	GCGC	2 cut(s)	936, 1675
BstKTI	GATC	6 cut(s)	51, 124, 895, 1090, 1467, 1583
BstMAI	GTCTC	7 cut(s)	109, 369, 538, 694, 828, 1253, 1303
BstMBI	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
BstMCI	CGRYCG	1 cut(s)	1404
BstMWI	GCNNNNNNNGC	2 cut(s)	326, 1715
BstNI	CCWGG	3 cut(s)	388, 1303, 1445
BstNSI	RCATGY	4 cut(s)	213, 428, 673, 925
BstSCI	CCNGG	5 cut(s)	348, 386, 756, 1301, 1443
BstSFI	CTRYAG	1 cut(s)	22
BstUI	CGCG	2 cut(s)	65, 936
BstV1I	GCAGC	4 cut(s)	353, 741, 920, 1693
BstV2I	GAAGAC	1 cut(s)	60
BstX2I	RGATCY	1 cut(s)	1464
BstXI	CCANNNNNNTGG	2 cut(s)	161, 230
BstYI	RGATCY	1 cut(s)	1464
BsuI	GTATCC	1 cut(s)	304
BsuRI	GGCC	7 cut(s)	75, 165, 558, 650, 1112, 1329, 1443
BtgI	CCRYGG	1 cut(s)	223
BtsCI	GGATG	4 cut(s)	186, 719, 744, 1160
BtsI	GCAGTG	1 cut(s)	250
BtsIMutI	CAGTG	3 cut(s)	250, 476, 795
BveI	ACCTGC	1 cut(s)	757
CciI	TCATGA	1 cut(s)	1782
CfoI	GCGC	2 cut(s)	936, 1675
Cfr13I	GGNCC	1 cut(s)	1111
CseI	GACGC	2 cut(s)	54, 938
Csp6I	GTAC	2 cut(s)	1577, 1790
CviQI	GTAC	2 cut(s)	1577, 1790
DdeI	CTNAG	5 cut(s)	280, 904, 1414, 1698, 1724
DpnI	GATC	6 cut(s)	50, 123, 894, 1089, 1466, 1582
DpnII	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
DraI	TTTAAA	1 cut(s)	1471
Eam1104I	CTCTTC	1 cut(s)	579
EarI	CTCTTC	1 cut(s)	579
EciI	GGCGGA	1 cut(s)	1111
Ecl136II	GAGCTC	2 cut(s)	151, 1076
Eco130I	CCWWGG	2 cut(s)	223, 1668
Eco24I	GRGCYC	2 cut(s)	153, 1078
Eco31I	GGTCTC	1 cut(s)	109
Eco53kI	GAGCTC	2 cut(s)	151, 1076
Eco57I	CTGAAG	1 cut(s)	1761
EcoICRI	GAGCTC	2 cut(s)	151, 1076
EcoRI	GAATTC	1 cut(s)	391
EcoRII	CCWGG	3 cut(s)	386, 1301, 1443
EcoT14I	CCWWGG	2 cut(s)	223, 1668
EcoT22I	ATGCAT	2 cut(s)	42, 719
EcoT38I	GRGCYC	2 cut(s)	153, 1078
ErhI	CCWWGG	2 cut(s)	223, 1668
FalI	AAGNNNNNCTT	2 cut(s)	1451, 1483
FauI	CCCGC	2 cut(s)	823, 929
FauNDI	CATATG	1 cut(s)	1476
FbaI	TGATCA	2 cut(s)	48, 121
Fnu4HI	GCNGC	4 cut(s)	342, 730, 909, 1707
FokI	GGATG	4 cut(s)	173, 726, 751, 1167
FriOI	GRGCYC	2 cut(s)	153, 1078
Fsp4HI	GCNGC	4 cut(s)	342, 730, 909, 1707
FspBI	CTAG	1 cut(s)	539
GlaI	GCGC	2 cut(s)	935, 1674
GluI	GCNGC	4 cut(s)	342, 730, 909, 1707
GsuI	CTGGAG	1 cut(s)	1324
HaeIII	GGCC	7 cut(s)	75, 165, 558, 650, 1112, 1329, 1443
HapII	CCGG	2 cut(s)	349, 757
HgaI	GACGC	2 cut(s)	54, 938
HhaI	GCGC	2 cut(s)	936, 1675
Hin6I	GCGC	2 cut(s)	934, 1673
HinP1I	GCGC	2 cut(s)	934, 1673
HincII	GTYRAC	1 cut(s)	603
HindII	GTYRAC	1 cut(s)	603
HindIII	AAGCTT	2 cut(s)	1047, 1350
HpaII	CCGG	2 cut(s)	349, 757
HphI	GGTGA	4 cut(s)	376, 887, 1355, 1783
Hpy166II	GTNNAC	3 cut(s)	603, 1642, 1792
Hpy188I	TCNGA	5 cut(s)	283, 892, 1154, 1198, 1701
Hpy188III	TCNNGA	6 cut(s)	52, 635, 711, 1177, 1367, 1783
Hpy8I	GTNNAC	3 cut(s)	603, 1642, 1792
HpyAV	CCTTC	9 cut(s)	140, 200, 204, 661, 767, 844, 1340, 1448, 1641
HpyCH4III	ACNGT	2 cut(s)	799, 1501
HpyCH4IV	ACGT	1 cut(s)	1103
HpyF10VI	GCNNNNNNNGC	2 cut(s)	326, 1715
HpyF3I	CTNAG	5 cut(s)	280, 904, 1414, 1698, 1724
HpySE526I	ACGT	1 cut(s)	1103
HspAI	GCGC	2 cut(s)	934, 1673
Ksp22I	TGATCA	2 cut(s)	48, 121
Kzo9I	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
LmnI	GCTCC	6 cut(s)	156, 218, 278, 338, 1305, 1693
Lsp1109I	GCAGC	4 cut(s)	353, 741, 920, 1693
LweI	GCATC	8 cut(s)	49, 510, 704, 1269, 1362, 1387, 1552, 1684
MaeI	CTAG	1 cut(s)	539
MaeII	ACGT	1 cut(s)	1103
MaeIII	GTNAC	9 cut(s)	80, 632, 665, 793, 1099, 1104, 1430, 1624, 1748
MalI	GATC	6 cut(s)	50, 123, 894, 1089, 1466, 1582
MboI	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
MboII	GAAGA	8 cut(s)	60, 596, 1131, 1463, 1474, 1496, 1526, 1571
MflI	RGATCY	1 cut(s)	1464
MhlI	GDGCHC	3 cut(s)	153, 1078, 1310
MlyI	GAGTC	6 cut(s)	64, 278, 596, 801, 1170, 1788
MmeI	TCCRAC	1 cut(s)	316
Mph1103I	ATGCAT	2 cut(s)	42, 719
MroXI	GAANNNNTTC	1 cut(s)	752
MseI	TTAA	6 cut(s)	450, 984, 1190, 1470, 1530, 1799
MslI	CAYNNNNRTG	8 cut(s)	159, 228, 234, 311, 674, 920, 1170, 1338
MspI	CCGG	2 cut(s)	349, 757
MspR9I	CCNGG	5 cut(s)	350, 388, 758, 1303, 1445
Mva1269I	GAATGC	1 cut(s)	1219
MvaI	CCWGG	3 cut(s)	388, 1303, 1445
MvnI	CGCG	2 cut(s)	65, 936
MwoI	GCNNNNNNNGC	2 cut(s)	326, 1715
NciI	CCSGG	2 cut(s)	350, 758
NcoI	CCATGG	1 cut(s)	223
NdeI	CATATG	1 cut(s)	1476
NdeII	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
NlaIV	GGNNCC	2 cut(s)	274, 1695
NmeAIII	GCCGAG	1 cut(s)	850
NmuCI	GTSAC	3 cut(s)	632, 665, 793
NsiI	ATGCAT	2 cut(s)	42, 719
NspI	RCATGY	4 cut(s)	213, 428, 673, 925
PaeI	GCATGC	1 cut(s)	213
PagI	TCATGA	1 cut(s)	1782
PciI	ACATGT	1 cut(s)	921
PcsI	WCGNNNNNNNCGW	1 cut(s)	573
PctI	GAATGC	1 cut(s)	1219
PdmI	GAANNNNTTC	1 cut(s)	752
PfeI	GAWTC	6 cut(s)	550, 887, 1256, 1292, 1664, 1815
PflFI	GACNNNGTC	1 cut(s)	101
PflMI	CCANNNNNTGG	1 cut(s)	387
PfoI	TCCNGGA	2 cut(s)	756, 1301
PkrI	GCNGC	4 cut(s)	343, 731, 910, 1708
PleI	GAGTC	6 cut(s)	63, 278, 595, 800, 1169, 1787
PpsI	GAGTC	6 cut(s)	63, 278, 595, 800, 1169, 1787
PscI	ACATGT	1 cut(s)	921
PshBI	ATTAAT	1 cut(s)	1530
Psp124BI	GAGCTC	2 cut(s)	153, 1078
Psp1406I	AACGTT	1 cut(s)	1103
Psp6I	CCWGG	3 cut(s)	386, 1301, 1443
PspGI	CCWGG	3 cut(s)	386, 1301, 1443
PspN4I	GGNNCC	2 cut(s)	274, 1695
PspPI	GGNCC	1 cut(s)	1111
PsuI	RGATCY	1 cut(s)	1464
PsyI	GACNNNGTC	1 cut(s)	101
RsaI	GTAC	2 cut(s)	1578, 1791
RsaNI	GTAC	2 cut(s)	1577, 1790
RseI	CAYNNNNRTG	8 cut(s)	159, 228, 234, 311, 674, 920, 1170, 1338
SacI	GAGCTC	2 cut(s)	153, 1078
SaqAI	TTAA	6 cut(s)	450, 984, 1190, 1470, 1530, 1799
SatI	GCNGC	4 cut(s)	342, 730, 909, 1707
Sau3AI	GATC	6 cut(s)	48, 121, 892, 1087, 1464, 1580
Sau96I	GGNCC	1 cut(s)	1111
SchI	GAGTC	6 cut(s)	64, 278, 596, 801, 1170, 1788
ScrFI	CCNGG	5 cut(s)	350, 388, 758, 1303, 1445
SduI	GDGCHC	3 cut(s)	153, 1078, 1310
SfaNI	GCATC	8 cut(s)	49, 510, 704, 1269, 1362, 1387, 1552, 1684
SfcI	CTRYAG	1 cut(s)	22
SmiMI	CAYNNNNRTG	8 cut(s)	159, 228, 234, 311, 674, 920, 1170, 1338
SmlI	CTYRAG	3 cut(s)	263, 1077, 1367
SmoI	CTYRAG	3 cut(s)	263, 1077, 1367
SphI	GCATGC	1 cut(s)	213
SsiI	CCGC	5 cut(s)	485, 816, 936, 1122, 1400
SspMI	CTAG	1 cut(s)	539
SstI	GAGCTC	2 cut(s)	153, 1078
StyD4I	CCNGG	5 cut(s)	348, 386, 756, 1301, 1443
StyI	CCWWGG	2 cut(s)	223, 1668
TaaI	ACNGT	2 cut(s)	799, 1501
TaiI	ACGT	1 cut(s)	1106
TaqI	TCGA	3 cut(s)	790, 969, 1557
TatI	WGTACW	1 cut(s)	1789
TfiI	GAWTC	6 cut(s)	550, 887, 1256, 1292, 1664, 1815
Tru1I	TTAA	6 cut(s)	450, 984, 1190, 1470, 1530, 1799
Tru9I	TTAA	6 cut(s)	450, 984, 1190, 1470, 1530, 1799
TscAI	CASTG	3 cut(s)	257, 483, 802
TseFI	GTSAC	3 cut(s)	632, 665, 793
TseI	GCWGC	4 cut(s)	341, 729, 908, 1706
Tsp45I	GTSAC	3 cut(s)	632, 665, 793
TspGWI	ACGGA	4 cut(s)	277, 1268, 1659, 1827
TspRI	CASTG	3 cut(s)	257, 483, 802
Tth111I	GACNNNGTC	1 cut(s)	101
Van91I	CCANNNNNTGG	1 cut(s)	387
VspI	ATTAAT	1 cut(s)	1530
XapI	RAATTY	6 cut(s)	391, 855, 1192, 1266, 1608, 1824
XceI	RCATGY	4 cut(s)	213, 428, 673, 925
XcmI	CCANNNNNNNNNTGG	1 cut(s)	227
XmnI	GAANNNNTTC	1 cut(s)	752
XspI	CTAG	1 cut(s)	539
Zsp2I	ATGCAT	2 cut(s)	42, 719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.