A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g40801 |
| rosa_chinensis | RchiOBHm_Chr6g0299781 |
| rosa_laevigata | RLG00000011388 RLG00000011389 |
| rosa_multiflora | Rmu_ssc0000158.1_g000002 Rmu_ssc0000158.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00168380 |
| rosa_rugosa | Rorug06G0292200 |
| rosa_samantha | Rh6CG417800 |
| rosa_wichuraiana | Rw6G035290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 254 |
| AfaI | GTAC | 1 cut(s) | 44 |
| AgsI | TTSAA | 1 cut(s) | 320 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 28 |
| AluBI | AGCT | 1 cut(s) | 82 |
| AluI | AGCT | 1 cut(s) | 82 |
| Alw26I | GTCTC | 3 cut(s) | 134, 269, 293 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 182 |
| AspS9I | GGNCC | 1 cut(s) | 134 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| AvaII | GGWCC | 1 cut(s) | 134 |
| BauI | CACGAG | 1 cut(s) | 70 |
| BbvCI | CCTCAGC | 1 cut(s) | 213 |
| BcoDI | GTCTC | 3 cut(s) | 134, 269, 293 |
| BfaI | CTAG | 3 cut(s) | 18, 33, 325 |
| Bme18I | GGWCC | 1 cut(s) | 134 |
| BmgT120I | GGNCC | 1 cut(s) | 134 |
| BmsI | GCATC | 2 cut(s) | 214, 286 |
| BoxI | GACNNNNGTC | 1 cut(s) | 281 |
| Bpu10I | CCTNAGC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 1 cut(s) | 134 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 26 |
| Bse1I | ACTGG | 1 cut(s) | 14 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseNI | ACTGG | 1 cut(s) | 14 |
| BsmAI | GTCTC | 3 cut(s) | 134, 269, 293 |
| Bsp143I | GATC | 1 cut(s) | 192 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspQI | GCTCTTC | 1 cut(s) | 321 |
| BsrI | ACTGG | 1 cut(s) | 14 |
| BssMI | GATC | 1 cut(s) | 192 |
| BssSI | CACGAG | 1 cut(s) | 70 |
| Bst2BI | CACGAG | 1 cut(s) | 70 |
| Bst6I | CTCTTC | 3 cut(s) | 267, 303, 321 |
| BstDEI | CTNAG | 1 cut(s) | 213 |
| BstKTI | GATC | 1 cut(s) | 195 |
| BstMAI | GTCTC | 3 cut(s) | 134, 269, 293 |
| BstMBI | GATC | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 115 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 281 |
| Cfr13I | GGNCC | 1 cut(s) | 134 |
| Csp6I | GTAC | 1 cut(s) | 43 |
| CviAII | CATG | 3 cut(s) | 46, 104, 256 |
| CviJI | RGCY | 8 cut(s) | 82, 109, 118, 164, 171, 211, 217, 314 |
| CviKI_1 | RGCY | 8 cut(s) | 82, 109, 118, 164, 171, 211, 217, 314 |
| CviQI | GTAC | 1 cut(s) | 43 |
| DdeI | CTNAG | 1 cut(s) | 213 |
| DpnI | GATC | 1 cut(s) | 194 |
| DpnII | GATC | 1 cut(s) | 192 |
| DraI | TTTAAA | 1 cut(s) | 93 |
| Eam1104I | CTCTTC | 3 cut(s) | 267, 303, 321 |
| EarI | CTCTTC | 3 cut(s) | 267, 303, 321 |
| Eco47I | GGWCC | 1 cut(s) | 134 |
| Eco57I | CTGAAG | 1 cut(s) | 254 |
| FaeI | CATG | 3 cut(s) | 49, 107, 259 |
| FaiI | YATR | 9 cut(s) | 23, 47, 57, 105, 168, 174, 224, 257, 268 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 300 |
| FatI | CATG | 3 cut(s) | 45, 103, 255 |
| FspBI | CTAG | 3 cut(s) | 18, 33, 325 |
| Hin1II | CATG | 3 cut(s) | 49, 107, 259 |
| HinfI | GANTC | 2 cut(s) | 68, 277 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 3 cut(s) | 113, 151, 290 |
| Hpy8I | GTNNAC | 1 cut(s) | 186 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 115 |
| HpyF3I | CTNAG | 1 cut(s) | 213 |
| Hsp92II | CATG | 3 cut(s) | 49, 107, 259 |
| Kzo9I | GATC | 1 cut(s) | 192 |
| LguI | GCTCTTC | 1 cut(s) | 321 |
| LpnPI | CCDG | 1 cut(s) | 266 |
| LweI | GCATC | 2 cut(s) | 214, 286 |
| MaeI | CTAG | 3 cut(s) | 18, 33, 325 |
| MaeIII | GTNAC | 1 cut(s) | 61 |
| MalI | GATC | 1 cut(s) | 194 |
| MboI | GATC | 1 cut(s) | 192 |
| MboII | GAAGA | 4 cut(s) | 284, 308, 317, 320 |
| MlyI | GAGTC | 2 cut(s) | 62, 271 |
| MnlI | CCTC | 4 cut(s) | 120, 222, 228, 304 |
| MroXI | GAANNNNTTC | 1 cut(s) | 182 |
| MseI | TTAA | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 115 |
| NdeII | GATC | 1 cut(s) | 192 |
| NlaIII | CATG | 3 cut(s) | 49, 107, 259 |
| NmuCI | GTSAC | 1 cut(s) | 61 |
| PciSI | GCTCTTC | 1 cut(s) | 321 |
| PdmI | GAANNNNTTC | 1 cut(s) | 182 |
| PleI | GAGTC | 2 cut(s) | 62, 271 |
| PpsI | GAGTC | 2 cut(s) | 62, 271 |
| PshAI | GACNNNNGTC | 1 cut(s) | 281 |
| PspPI | GGNCC | 1 cut(s) | 134 |
| RsaI | GTAC | 1 cut(s) | 44 |
| RsaNI | GTAC | 1 cut(s) | 43 |
| SapI | GCTCTTC | 1 cut(s) | 321 |
| SaqAI | TTAA | 1 cut(s) | 92 |
| Sau3AI | GATC | 1 cut(s) | 192 |
| Sau96I | GGNCC | 1 cut(s) | 134 |
| SchI | GAGTC | 2 cut(s) | 62, 271 |
| SetI | ASST | 2 cut(s) | 84, 249 |
| SfaNI | GCATC | 2 cut(s) | 214, 286 |
| SinI | GGWCC | 1 cut(s) | 134 |
| SmlI | CTYRAG | 1 cut(s) | 113 |
| SmoI | CTYRAG | 1 cut(s) | 113 |
| SspMI | CTAG | 3 cut(s) | 18, 33, 325 |
| TaqI | TCGA | 2 cut(s) | 150, 291 |
| TaqII | GACCGA | 1 cut(s) | 122 |
| Tru1I | TTAA | 1 cut(s) | 92 |
| Tru9I | TTAA | 1 cut(s) | 92 |
| TseFI | GTSAC | 1 cut(s) | 61 |
| Tsp45I | GTSAC | 1 cut(s) | 61 |
| TspDTI | ATGAA | 2 cut(s) | 62, 318 |
| VpaK11BI | GGWCC | 1 cut(s) | 134 |
| XmnI | GAANNNNTTC | 1 cut(s) | 182 |
| XspI | CTAG | 3 cut(s) | 18, 33, 325 |