Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0015287

Physical Location & Seq

Genomic Coordinates Reverse (-)

54780307 .. 54783775

Gene Structure 3469 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014564

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGGCCCACCACCGAAGTCCGCCGGCCGAACGATTTCGCAGGAGGCCTTCGACGAGGTCGTGAAGGAGAACATCGACGATCTCGGCATGGACCCCACCGAGGCCCTCCAGGACGCCATCGAAACCCTAACTCTTCAGGGCGTCGATCTCTCTGGGATTGTCACCTGTGTGCCAGGAGAGGGTGGTGTGAAGGACAACCCTGTGATTCAGTGTCTGGATAGATTGAAGCAGTTGAATTCTGGCGAAAACAGTCAAGTAGGCGATGAGATAGTTAAGTTACTTGATGAACTTACAGAGCTGTGTAATTCTGAAGCTTCTGGAAACTCTGCAATAGCCGCTAGAAACGGCGCGGTTGAATTGATTTGTTCTATATGTTCTAAGGTTTCGACTGGGTGCCAGGGTGCTCTAGTTTCGGCTTTGAAGGCAATGGCTTCGTTACTTCATGATTTGCAAAGTAGAGAGGCATTTAGAGCAAGTGGTGGACCCAAGCTTGTGGTGGGTATTCTAACTGATGGTTTTGAGAATATAGAAATATTGAGCAGTGGCTTTGCTGTCATTGCTGCTGCTGCAACGGGTAATGAGGTTATAAAAGAGTCTTTCATGGAGTTGAAGACTGATGAGCTTATTCTGCGAGCACTTAGTATAAAAAGTGAAGGCAGCGTTGATAGTTTATATGATGCCATACGGATTCTCTTAACACCTGATGATACTCGTGTTTTGGCTTCCCAAGTTTATGGTTACGCGCGGAAATTTGCCAAAATTGGAATTCCAGGAGCTCTGGTTGACTCCATACGTGCGGGGCTAAGCTCACCTAGTCTTGTTTCAGCAAGCATCGCTTTGAAAGCTGTTGCTGCCAATGATGAAATATGTACAACCATTTCTGAACATGGTGGTATTGATGCAGTTCTCATATGCATTGATGACAGTAGTGAACAAGGCAATAAAACTGTTGCTAAAGCTTGCTGTTCTTTGCTCTCCAGGTTGGCAGGAAGTGACACAAATAAGAATGCCATTGTTGAGAAGGGAATGGATAGGCTGATCAAACTCTCCGGTAGATTTTCTGATGACCCTTCAGTCCTGCAAGAGGTTATGTCTCTTATTTCAGTACTCGCCTTAAGATCCCCTGAAAATGCAGCCCGTGCAATTGAAGCTGGGGCTGGAGAACTTGCAATCCAAGCTATGCAGAACTTCCCGGGGGCACAGCTACTGCAGAGGAATTGCTGTCTCATGATCCGGAATGTTGTTGTAAGAAACTCAGAAAACAGAACAATTATGCTCAATAGTGGTGTTGAAAAATGCATAAGGCAGGCCAAGCAAACTCATGCAATCTGTAAGGAAGCCGCTACAGACGCCCTGAGGGATTTGGGATTAGATGATTACTACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002244 GO:0002376 GO:0002520 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0009987 GO:0030097 GO:0030154 GO:0032501 GO:0032502 GO:0044424 GO:0044444 GO:0044464 GO:0048513 GO:0048534 GO:0048731 GO:0048856 GO:0048869

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4

Protein Analysis

463

Amino Acids

48.8

Weight (kDa)

4.76

Isoelectric Point (pI)

36.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33945
fragaria_vesca	FvH4_2g06790
malus_domestica	MD10G1089700.v1.1
prunus_persica	Prupe.8G116700_v2.0.a1
pyrus_communis	pycom10g07310
rosa_chinensis	RchiOBHm_Chr6g0259011
rosa_laevigata	RLG00000014564
rosa_multiflora	Rmu_ssc0000050.1_g000116
rosa_roxburghii	Rroxscaffold_7G00206250 Rroxscaffold_7G00206420
rosa_rugosa	Rorug05G0584800
rosa_samantha	Rh6AG101200 Rh6BG093300 Rh6CG090700 Rh6DG084600
rosa_wichuraiana	Rw6G008800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	587
AasI	GACNNNNNNGTC	1 cut(s)	1073
AccB1I	GGYRCC	1 cut(s)	393
AccII	CGCG	3 cut(s)	350, 743, 745
AccIII	TCCGGA	1 cut(s)	1233
AciI	CCGC	6 cut(s)	21, 336, 350, 745, 797, 1341
AclWI	GGATC	2 cut(s)	1113, 1225
AcoI	YGGCCR	1 cut(s)	25
AcsI	RAATTY	3 cut(s)	235, 749, 765
AcuI	CTGAAG	3 cut(s)	119, 330, 1056
AcyI	GRCGYC	3 cut(s)	114, 141, 1350
AfaI	GTAC	2 cut(s)	871, 1107
AfiI	CCNNNNNNNGG	3 cut(s)	100, 179, 1084
AflII	CTTAAG	1 cut(s)	1114
AgsI	TTSAA	8 cut(s)	226, 235, 356, 421, 610, 841, 1148, 1292
AjnI	CCWGG	5 cut(s)	108, 172, 396, 769, 977
AleI	CACNNNNGTG	1 cut(s)	167
AloI	GAACNNNNNNTCC	2 cut(s)	1155, 1187
Alw21I	GWGCWC	3 cut(s)	406, 637, 778
Alw26I	GTCTC	2 cut(s)	1098, 1229
AlwI	GGATC	2 cut(s)	1113, 1225
AlwNI	CAGNNNCTG	2 cut(s)	214, 1207
Ama87I	CYCGRG	1 cut(s)	1192
Aor13HI	TCCGGA	1 cut(s)	1233
AoxI	GGCC	5 cut(s)	4, 25, 45, 102, 1308
ApaI	GGGCCC	1 cut(s)	8
ApeKI	GCWGC	6 cut(s)	560, 563, 566, 657, 851, 1133
ApoI	RAATTY	3 cut(s)	235, 749, 765
Asp700I	GAANNNNTTC	1 cut(s)	34
AspLEI	GCGC	2 cut(s)	350, 745
AspS9I	GGNCC	5 cut(s)	4, 5, 91, 103, 482
AsuC2I	CCSGG	2 cut(s)	1193, 1194
AsuHPI	GGTGA	2 cut(s)	154, 801
AvaI	CYCGRG	1 cut(s)	1192
AvaII	GGWCC	2 cut(s)	91, 482
AxyI	CCTNAGG	1 cut(s)	1355
BaeGI	GKGCMC	2 cut(s)	8, 1201
BaeI	ACNNNNGTAYC	2 cut(s)	699, 732
BanI	GGYRCC	1 cut(s)	393
BanII	GRGCYC	2 cut(s)	8, 778
BauI	CACGAG	1 cut(s)	711
BbsI	GAAGAC	1 cut(s)	617
Bbv12I	GWGCWC	3 cut(s)	406, 637, 778
BbvI	GCAGC	6 cut(s)	547, 550, 553, 669, 838, 1145
BccI	CCATC	2 cut(s)	125, 506
BceAI	ACGGC	1 cut(s)	361
BcgI	CGANNNNNNTGC	2 cut(s)	414, 448
BciT130I	CCWGG	5 cut(s)	110, 174, 398, 771, 979
BclI	TGATCA	1 cut(s)	1038
BcnI	CCSGG	2 cut(s)	1193, 1194
BcoDI	GTCTC	2 cut(s)	1098, 1229
BfaI	CTAG	3 cut(s)	339, 407, 813
BfmI	CTRYAG	2 cut(s)	1208, 1344
BfrI	CTTAAG	1 cut(s)	1114
BisI	GCNGC	8 cut(s)	336, 561, 564, 567, 658, 852, 1134, 1341
BlpI	GCTNAGC	1 cut(s)	803
BlsI	GCNGC	8 cut(s)	337, 562, 565, 568, 659, 853, 1135, 1342
BmcAI	AGTACT	1 cut(s)	1107
Bme1390I	CCNGG	7 cut(s)	110, 174, 398, 771, 979, 1193, 1194
Bme18I	GGWCC	2 cut(s)	91, 482
BmeT110I	CYCGRG	1 cut(s)	1192
BmgT120I	GGNCC	5 cut(s)	4, 5, 91, 103, 482
BmiI	GGNNCC	4 cut(s)	6, 93, 395, 484
BmrFI	CCNGG	7 cut(s)	110, 174, 398, 771, 979, 1193, 1194
BmrI	ACTGGG	1 cut(s)	399
BmsI	GCATC	3 cut(s)	667, 840, 889
BmuI	ACTGGG	1 cut(s)	399
BpiI	GAAGAC	1 cut(s)	617
BpmI	CTGGAG	3 cut(s)	92, 961, 1179
Bpu1102I	GCTNAGC	1 cut(s)	803
BpuMI	CCSGG	2 cut(s)	1193, 1194
BsaAI	YACGTR	1 cut(s)	794
BsaHI	GRCGYC	3 cut(s)	114, 141, 1350
BsaJI	CCNNGG	4 cut(s)	99, 397, 1192, 1193
BsaWI	WCCGGW	2 cut(s)	1049, 1233
BsaXI	ACNNNNNCTCC	2 cut(s)	765, 795
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 179, 1084
Bse118I	RCCGGY	1 cut(s)	23
Bse1I	ACTGG	1 cut(s)	394
Bse21I	CCTNAGG	1 cut(s)	1355
Bse3DI	GCAATG	2 cut(s)	432, 555
BseAI	TCCGGA	1 cut(s)	1233
BseBI	CCWGG	5 cut(s)	110, 174, 398, 771, 979
BseDI	CCNNGG	4 cut(s)	99, 397, 1192, 1193
BseLI	CCNNNNNNNGG	3 cut(s)	100, 179, 1084
BseMI	GCAATG	2 cut(s)	432, 555
BseMII	CTCAG	2 cut(s)	1269, 1346
BseNI	ACTGG	1 cut(s)	394
BseSI	GKGCMC	2 cut(s)	8, 1201
BseX3I	CGGCCG	1 cut(s)	25
BseXI	GCAGC	6 cut(s)	547, 550, 553, 669, 838, 1145
BseYI	CCCAGC	1 cut(s)	1151
Bsh1236I	CGCG	3 cut(s)	350, 743, 745
Bsh1285I	CGRYCG	1 cut(s)	28
BshFI	GGCC	5 cut(s)	6, 27, 47, 104, 1310
BshNI	GGYRCC	1 cut(s)	393
BsiEI	CGRYCG	1 cut(s)	28
BsiHKAI	GWGCWC	3 cut(s)	406, 637, 778
BsiHKCI	CYCGRG	1 cut(s)	1192
BsiSI	CCGG	4 cut(s)	24, 1050, 1193, 1234
BslI	CCNNNNNNNGG	3 cut(s)	100, 179, 1084
BsmAI	GTCTC	2 cut(s)	1098, 1229
BsmI	GAATGC	1 cut(s)	1012
BsnI	GGCC	5 cut(s)	6, 27, 47, 104, 1310
BsoBI	CYCGRG	1 cut(s)	1192
Bsp120I	GGGCCC	1 cut(s)	4
Bsp1286I	GDGCHC	5 cut(s)	8, 406, 637, 778, 1201
Bsp13I	TCCGGA	1 cut(s)	1233
Bsp1407I	TGTACA	1 cut(s)	869
Bsp143I	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
Bsp1720I	GCTNAGC	1 cut(s)	803
BspACI	CCGC	6 cut(s)	21, 336, 350, 745, 797, 1341
BspANI	GGCC	5 cut(s)	6, 27, 47, 104, 1310
BspCNI	CTCAG	2 cut(s)	1268, 1347
BspEI	TCCGGA	1 cut(s)	1233
BspFNI	CGCG	3 cut(s)	350, 743, 745
BspHI	TCATGA	2 cut(s)	442, 1227
BspLI	GGNNCC	4 cut(s)	6, 93, 395, 484
BspMAI	CTGCAG	1 cut(s)	1212
BspPI	GGATC	2 cut(s)	1113, 1225
BspT107I	GGYRCC	1 cut(s)	393
BspTI	CTTAAG	1 cut(s)	1114
BsrDI	GCAATG	2 cut(s)	432, 555
BsrFI	RCCGGY	1 cut(s)	23
BsrGI	TGTACA	1 cut(s)	869
BsrI	ACTGG	1 cut(s)	394
BssAI	RCCGGY	1 cut(s)	23
BssECI	CCNNGG	4 cut(s)	99, 397, 1192, 1193
BssMI	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
BssNI	GRCGYC	3 cut(s)	114, 141, 1350
BssSI	CACGAG	1 cut(s)	711
Bst2BI	CACGAG	1 cut(s)	711
Bst2UI	CCWGG	5 cut(s)	110, 174, 398, 771, 979
Bst4CI	ACNGT	3 cut(s)	251, 926, 949
Bst6I	CTCTTC	1 cut(s)	138
BstACI	GRCGYC	3 cut(s)	114, 141, 1350
BstAFI	CTTAAG	1 cut(s)	1114
BstAPI	GCANNNNNTGC	1 cut(s)	1139
BstAUI	TGTACA	1 cut(s)	869
BstBAI	YACGTR	1 cut(s)	794
BstC8I	GCNNGC	5 cut(s)	25, 633, 829, 961, 1308
BstDEI	CTNAG	5 cut(s)	378, 638, 803, 1255, 1355
BstENI	CCTNNNNNAGG	1 cut(s)	1082
BstFNI	CGCG	3 cut(s)	350, 743, 745
BstHHI	GCGC	2 cut(s)	350, 745
BstKTI	GATC	5 cut(s)	82, 148, 1041, 1121, 1233
BstMAI	GTCTC	2 cut(s)	1098, 1229
BstMBI	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
BstMCI	CGRYCG	1 cut(s)	28
BstNI	CCWGG	5 cut(s)	110, 174, 398, 771, 979
BstSCI	CCNGG	7 cut(s)	108, 172, 396, 769, 977, 1191, 1192
BstSFI	CTRYAG	2 cut(s)	1208, 1344
BstSLI	GKGCMC	2 cut(s)	8, 1201
BstUI	CGCG	3 cut(s)	350, 743, 745
BstV1I	GCAGC	6 cut(s)	547, 550, 553, 669, 838, 1145
BstV2I	GAAGAC	1 cut(s)	617
BstX2I	RGATCY	1 cut(s)	1118
BstXI	CCANNNNNNTGG	2 cut(s)	493, 734
BstYI	RGATCY	1 cut(s)	1118
BstZI	CGGCCG	1 cut(s)	25
Bsu36I	CCTNAGG	1 cut(s)	1355
BsuRI	GGCC	5 cut(s)	6, 27, 47, 104, 1310
BtgZI	GCGATG	2 cut(s)	276, 817
BtsI	GCAGTG	1 cut(s)	547
BtsIMutI	CAGTG	2 cut(s)	215, 547
Cac8I	GCNNGC	5 cut(s)	25, 633, 829, 961, 1308
CaiI	CAGNNNCTG	2 cut(s)	214, 1207
CciI	TCATGA	2 cut(s)	442, 1227
CfoI	GCGC	2 cut(s)	350, 745
Cfr10I	RCCGGY	1 cut(s)	23
Cfr13I	GGNCC	5 cut(s)	4, 5, 91, 103, 482
Cfr9I	CCCGGG	1 cut(s)	1192
CseI	GACGC	3 cut(s)	122, 130, 1358
Csp6I	GTAC	2 cut(s)	870, 1106
CviAII	CATG	6 cut(s)	88, 443, 601, 887, 1228, 1322
CviQI	GTAC	2 cut(s)	870, 1106
DdeI	CTNAG	5 cut(s)	378, 638, 803, 1255, 1355
DpnI	GATC	5 cut(s)	81, 147, 1040, 1120, 1232
DpnII	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
DrdI	GACNNNNNNGTC	1 cut(s)	1073
DseDI	GACNNNNNNGTC	1 cut(s)	1073
EaeI	YGGCCR	1 cut(s)	25
EagI	CGGCCG	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	138
EarI	CTCTTC	1 cut(s)	138
EciI	GGCGGA	1 cut(s)	10
Ecl136II	GAGCTC	1 cut(s)	776
EclXI	CGGCCG	1 cut(s)	25
Eco147I	AGGCCT	1 cut(s)	47
Eco24I	GRGCYC	2 cut(s)	8, 778
Eco47I	GGWCC	2 cut(s)	91, 482
Eco52I	CGGCCG	1 cut(s)	25
Eco53kI	GAGCTC	1 cut(s)	776
Eco57I	CTGAAG	3 cut(s)	119, 330, 1056
Eco81I	CCTNAGG	1 cut(s)	1355
Eco88I	CYCGRG	1 cut(s)	1192
EcoICRI	GAGCTC	1 cut(s)	776
EcoNI	CCTNNNNNAGG	1 cut(s)	1082
EcoO109I	RGGNCCY	1 cut(s)	103
EcoRI	GAATTC	2 cut(s)	235, 765
EcoRII	CCWGG	5 cut(s)	108, 172, 396, 769, 977
EcoT22I	ATGCAT	2 cut(s)	917, 1301
EcoT38I	GRGCYC	2 cut(s)	8, 778
FaeI	CATG	6 cut(s)	91, 446, 604, 890, 1231, 1325
FalI	AAGNNNNNCTT	2 cut(s)	820, 852
FatI	CATG	6 cut(s)	87, 442, 600, 886, 1227, 1321
FauI	CCCGC	1 cut(s)	790
FauNDI	CATATG	1 cut(s)	911
FbaI	TGATCA	1 cut(s)	1038
Fnu4HI	GCNGC	8 cut(s)	336, 561, 564, 567, 658, 852, 1134, 1341
FriOI	GRGCYC	2 cut(s)	8, 778
Fsp4HI	GCNGC	8 cut(s)	336, 561, 564, 567, 658, 852, 1134, 1341
FspBI	CTAG	3 cut(s)	339, 407, 813
GlaI	GCGC	2 cut(s)	349, 744
GluI	GCNGC	8 cut(s)	336, 561, 564, 567, 658, 852, 1134, 1341
GsaI	CCCAGC	1 cut(s)	1155
GsuI	CTGGAG	3 cut(s)	92, 961, 1179
HaeIII	GGCC	5 cut(s)	6, 27, 47, 104, 1310
HapII	CCGG	4 cut(s)	24, 1050, 1193, 1234
HgaI	GACGC	3 cut(s)	122, 130, 1358
HhaI	GCGC	2 cut(s)	350, 745
Hin1I	GRCGYC	3 cut(s)	114, 141, 1350
Hin1II	CATG	6 cut(s)	91, 446, 604, 890, 1231, 1325
Hin6I	GCGC	2 cut(s)	348, 743
HinP1I	GCGC	2 cut(s)	348, 743
HincII	GTYRAC	1 cut(s)	784
HindII	GTYRAC	1 cut(s)	784
HindIII	AAGCTT	3 cut(s)	312, 488, 957
HinfI	GANTC	4 cut(s)	205, 593, 688, 785
HpaII	CCGG	4 cut(s)	24, 1050, 1193, 1234
HphI	GGTGA	2 cut(s)	154, 801
Hpy166II	GTNNAC	3 cut(s)	482, 784, 932
Hpy188I	TCNGA	4 cut(s)	310, 883, 1063, 1258
Hpy188III	TCNNGA	6 cut(s)	61, 215, 318, 443, 1228, 1234
Hpy8I	GTNNAC	3 cut(s)	482, 784, 932
Hpy99I	CGWCG	3 cut(s)	56, 80, 146
HpyAV	CCTTC	7 cut(s)	58, 58, 184, 415, 647, 1015, 1080
HpyCH4III	ACNGT	3 cut(s)	251, 926, 949
HpyCH4IV	ACGT	1 cut(s)	793
HpyF3I	CTNAG	5 cut(s)	378, 638, 803, 1255, 1355
HpySE526I	ACGT	1 cut(s)	793
Hsp92I	GRCGYC	3 cut(s)	114, 141, 1350
Hsp92II	CATG	6 cut(s)	91, 446, 604, 890, 1231, 1325
HspAI	GCGC	2 cut(s)	348, 743
Kpn2I	TCCGGA	1 cut(s)	1233
KroI	GCCGGC	1 cut(s)	23
KroNI	GCCGGC	1 cut(s)	25
Ksp22I	TGATCA	1 cut(s)	1038
Kzo9I	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
LmnI	GCTCC	1 cut(s)	773
Lsp1109I	GCAGC	6 cut(s)	547, 550, 553, 669, 838, 1145
LweI	GCATC	3 cut(s)	667, 840, 889
MaeI	CTAG	3 cut(s)	339, 407, 813
MaeII	ACGT	1 cut(s)	793
MaeIII	GTNAC	5 cut(s)	160, 276, 435, 737, 992
MalI	GATC	5 cut(s)	81, 147, 1040, 1120, 1232
MboI	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
MboII	GAAGA	2 cut(s)	125, 622
MfeI	CAATTG	1 cut(s)	1143
MflI	RGATCY	1 cut(s)	1118
MhlI	GDGCHC	5 cut(s)	8, 406, 637, 778, 1201
MluCI	AATT	9 cut(s)	235, 304, 356, 749, 759, 765, 1143, 1216, 1269
MlyI	GAGTC	2 cut(s)	602, 779
Mph1103I	ATGCAT	2 cut(s)	917, 1301
MroI	TCCGGA	1 cut(s)	1233
MroNI	GCCGGC	1 cut(s)	23
MroXI	GAANNNNTTC	1 cut(s)	34
MseI	TTAA	3 cut(s)	273, 695, 1115
MslI	CAYNNNNRTG	1 cut(s)	167
MspCI	CTTAAG	1 cut(s)	1114
MspI	CCGG	4 cut(s)	24, 1050, 1193, 1234
MspR9I	CCNGG	7 cut(s)	110, 174, 398, 771, 979, 1193, 1194
MunI	CAATTG	1 cut(s)	1143
Mva1269I	GAATGC	1 cut(s)	1012
MvaI	CCWGG	5 cut(s)	110, 174, 398, 771, 979
MvnI	CGCG	3 cut(s)	350, 743, 745
NaeI	GCCGGC	1 cut(s)	25
NciI	CCSGG	2 cut(s)	1193, 1194
NdeI	CATATG	1 cut(s)	911
NdeII	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
NgoMIV	GCCGGC	1 cut(s)	23
NlaIII	CATG	6 cut(s)	91, 446, 604, 890, 1231, 1325
NlaIV	GGNNCC	4 cut(s)	6, 93, 395, 484
NmeAIII	GCCGAG	1 cut(s)	63
NmuCI	GTSAC	2 cut(s)	160, 992
NsiI	ATGCAT	2 cut(s)	917, 1301
OliI	CACNNNNGTG	1 cut(s)	167
PagI	TCATGA	2 cut(s)	442, 1227
PceI	AGGCCT	1 cut(s)	47
PcsI	WCGNNNNNNNCGW	1 cut(s)	57
PctI	GAATGC	1 cut(s)	1012
PdiI	GCCGGC	1 cut(s)	25
PdmI	GAANNNNTTC	1 cut(s)	34
PfeI	GAWTC	2 cut(s)	205, 688
PflFI	GACNNNGTC	1 cut(s)	56
PfoI	TCCNGGA	2 cut(s)	108, 769
PkrI	GCNGC	8 cut(s)	337, 562, 565, 568, 659, 853, 1135, 1342
PleI	GAGTC	2 cut(s)	601, 779
PpsI	GAGTC	2 cut(s)	601, 779
Ppu21I	YACGTR	1 cut(s)	794
PsiI	TTATAA	1 cut(s)	587
Psp124BI	GAGCTC	1 cut(s)	778
Psp6I	CCWGG	5 cut(s)	108, 172, 396, 769, 977
PspFI	CCCAGC	1 cut(s)	1151
PspGI	CCWGG	5 cut(s)	108, 172, 396, 769, 977
PspN4I	GGNNCC	4 cut(s)	6, 93, 395, 484
PspOMI	GGGCCC	1 cut(s)	4
PspPI	GGNCC	5 cut(s)	4, 5, 91, 103, 482
PstI	CTGCAG	1 cut(s)	1212
PstNI	CAGNNNCTG	2 cut(s)	214, 1207
PsuI	RGATCY	1 cut(s)	1118
PsyI	GACNNNGTC	1 cut(s)	56
RsaI	GTAC	2 cut(s)	871, 1107
RsaNI	GTAC	2 cut(s)	870, 1106
RseI	CAYNNNNRTG	1 cut(s)	167
SacI	GAGCTC	1 cut(s)	778
SaqAI	TTAA	3 cut(s)	273, 695, 1115
SatI	GCNGC	8 cut(s)	336, 561, 564, 567, 658, 852, 1134, 1341
Sau3AI	GATC	5 cut(s)	79, 145, 1038, 1118, 1230
Sau96I	GGNCC	5 cut(s)	4, 5, 91, 103, 482
ScaI	AGTACT	1 cut(s)	1107
SchI	GAGTC	2 cut(s)	602, 779
ScrFI	CCNGG	7 cut(s)	110, 174, 398, 771, 979, 1193, 1194
SduI	GDGCHC	5 cut(s)	8, 406, 637, 778, 1201
SfaNI	GCATC	3 cut(s)	667, 840, 889
SfcI	CTRYAG	2 cut(s)	1208, 1344
SinI	GGWCC	2 cut(s)	91, 482
SmaI	CCCGGG	1 cut(s)	1194
SmiMI	CAYNNNNRTG	1 cut(s)	167
SmlI	CTYRAG	1 cut(s)	1114
SmoI	CTYRAG	1 cut(s)	1114
Sse9I	AATT	9 cut(s)	235, 304, 356, 749, 759, 765, 1143, 1216, 1269
SseBI	AGGCCT	1 cut(s)	47
SsiI	CCGC	6 cut(s)	21, 336, 350, 745, 797, 1341
SspI	AATATT	1 cut(s)	534
SspMI	CTAG	3 cut(s)	339, 407, 813
SstI	GAGCTC	1 cut(s)	778
StuI	AGGCCT	1 cut(s)	47
StyD4I	CCNGG	7 cut(s)	108, 172, 396, 769, 977, 1191, 1192
TaaI	ACNGT	3 cut(s)	251, 926, 949
TaiI	ACGT	1 cut(s)	796
TaqI	TCGA	5 cut(s)	51, 75, 120, 144, 386
TasI	AATT	9 cut(s)	235, 304, 356, 749, 759, 765, 1143, 1216, 1269
TatI	WGTACW	2 cut(s)	869, 1105
TauI	GCSGC	2 cut(s)	338, 1343
TfiI	GAWTC	2 cut(s)	205, 688
Tru1I	TTAA	3 cut(s)	273, 695, 1115
Tru9I	TTAA	3 cut(s)	273, 695, 1115
TscAI	CASTG	2 cut(s)	215, 547
TseFI	GTSAC	2 cut(s)	160, 992
TseI	GCWGC	6 cut(s)	560, 563, 566, 657, 851, 1133
Tsp45I	GTSAC	2 cut(s)	160, 992
TspDTI	ATGAA	4 cut(s)	300, 431, 589, 876
TspGWI	ACGGA	1 cut(s)	700
TspMI	CCCGGG	1 cut(s)	1192
TspRI	CASTG	2 cut(s)	215, 547
Tth111I	GACNNNGTC	1 cut(s)	56
Vha464I	CTTAAG	1 cut(s)	1114
VpaK11BI	GGWCC	2 cut(s)	91, 482
XagI	CCTNNNNNAGG	1 cut(s)	1082
XapI	RAATTY	3 cut(s)	235, 749, 765
XcmI	CCANNNNNNNNNTGG	1 cut(s)	493
XmaI	CCCGGG	1 cut(s)	1192
XmnI	GAANNNNTTC	1 cut(s)	34
XspI	CTAG	3 cut(s)	339, 407, 813
ZrmI	AGTACT	1 cut(s)	1107
Zsp2I	ATGCAT	2 cut(s)	917, 1301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.