Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0015287

Physical Location & Seq

Genomic Coordinates Forward (+)

56194483 .. 56198040

Gene Structure 3558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00206420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGGCCCACCACCGAAGACCGCCGGCCGAACGATTTCGCAGGAGGCCTTCGACGAGGTCGTGAAGGAGAACATCGACGATCTCGGCATGGACCCCACCGAGGCCCTCCAGGACGCCATCGAAACCCTAACTCTTCAGGGCGTCGATCTCTCTGGGATTGTCACCTGTGTGCCAGGAGAGGGTGGTGTGAAGGACAACCCTGTGATTCAGTGTCTGGATAGATTGAAGCAGTTGAATTCTGGCGAAAACAGTCAAGTAGGCGATGAGGAGATAGTTAAGTTACTTGATGAACTTACAGAGCTGTGTAATTCTGAAGGTTCTGGAAACTCTGCAATAGCCGCTAGAAACGGTGCGGTAGAATTGATTTGTTCTATATGTTCTAAGGTTTCGACTGGGTGCCATGGTGCACTTGTTTCCGCTTTGAAGGCAATGGCTTCGTTACTTCATGATTTGCAAAGTAGAGAGGCATTTAGAGCAAGTGGTGGACCAAAGCTTGTGGTGGGCATTCTAACTGATGGATTTGAGAATATAGAAATATTGAGCAGTGGCTTTGCTGTCATTGCTGCTGCTGCAACGGGTAATGAGGTTACAAAAGAGTCTTTCATGGAGTTGAAGACTGATGAGCTTATTCTGCGAGCACTTAGTATAAAAAGTGAAGGCAGCGTTGATAGTTTATATGATGCCATACGGATTCTCTTAACACCTGATGATACTCGTGTTTTGGCTTCCCAAGTTTATGGTTATGCGCGGAAATTTGCCAAAATTGGAATTCCAGGAGCTCTGGTTGACTCCATACGTGCGGGGCTAAGCTCACCTAGTCTTGTTTCAGCAAGCATCGCTTTGAAAGCTGTTGCTGCCAATGATGAAATATGTACAACCATTTCTGAACATGGTGGTATTGATGCAGTTCTCATATGCATTGATGACAGTAGTGAACAAGGCAATAAAACTGTTGCTCAAGCTTGTTGTTCTTTGCTGTCCAGGTTGGCAGGAAATGACACAAATAAGAATGCCATTGTTGAGAAGGGAATGGATAGGCTAATGAAACTCTCCGGTAGATTTTCTGATGACCCTTCAGTCCTGCAAGAGATTATGTCTCTTATTTCAGTACTTGCCTTAAGATCCCCTGAAAATGCGGCCCGTGCAATTGAAGCTGGGGCTGGAGAACTTGCAATCCAAGCTATGCAGAACTTCCCTGCAGCACAGCTACTGCAAAGGAATTGTTGTCTCATGATCCGGAATCTTGTTGTAAGAAACTCAGAAAACAGGCAAGTGTTTTTATTACGAAAACTCATCCCCCTCCCTCCCCTTTATCTTAAAAGCACAGATAACTATGCGAAACTTACTCGCATGGCTTCCAAAGGGATAAGCCTCCTCAACACTGTGTGTGGTGTTGAAAATTGCATAAGGAAGGCCAAGCAAACTCATGCAATCTGCAAGGAAGCCGCTACAGACGCCCTGAGGGATTTGGGATTAGATGATTACTACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002244 GO:0002376 GO:0002520 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0007275 GO:0008150 GO:0009987 GO:0030097 GO:0030154 GO:0032501 GO:0032502 GO:0044424 GO:0044444 GO:0044464 GO:0048513 GO:0048534 GO:0048731 GO:0048856 GO:0048869

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4

Protein Analysis

497

Amino Acids

52.84

Weight (kDa)

4.94

Isoelectric Point (pI)

37.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015287)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33945
fragaria_vesca	FvH4_2g06790
malus_domestica	MD10G1089700.v1.1
prunus_persica	Prupe.8G116700_v2.0.a1
pyrus_communis	pycom10g07310
rosa_chinensis	RchiOBHm_Chr6g0259011
rosa_laevigata	RLG00000014564
rosa_multiflora	Rmu_ssc0000050.1_g000116
rosa_roxburghii	Rroxscaffold_7G00206250 Rroxscaffold_7G00206420
rosa_rugosa	Rorug05G0584800
rosa_samantha	Rh6AG101200 Rh6BG093300 Rh6CG090700 Rh6DG084600
rosa_wichuraiana	Rw6G008800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1076
AccB1I	GGYRCC	1 cut(s)	396
AccII	CGCG	1 cut(s)	748
AccIII	TCCGGA	1 cut(s)	1236
AciI	CCGC	8 cut(s)	21, 339, 353, 417, 748, 800, 1136, 1446
AclWI	GGATC	2 cut(s)	1116, 1228
AcoI	YGGCCR	1 cut(s)	25
AcsI	RAATTY	3 cut(s)	235, 752, 768
AcuI	CTGAAG	3 cut(s)	119, 333, 1059
AcyI	GRCGYC	3 cut(s)	114, 141, 1455
AdeI	CACNNNGTG	1 cut(s)	1386
AfaI	GTAC	2 cut(s)	874, 1110
AfiI	CCNNNNNNNGG	2 cut(s)	100, 179
AflII	CTTAAG	1 cut(s)	1117
AgsI	TTSAA	7 cut(s)	226, 235, 424, 613, 844, 1151, 1397
AjnI	CCWGG	4 cut(s)	108, 172, 772, 980
AleI	CACNNNNGTG	1 cut(s)	167
AloI	GAACNNNNNNTCC	2 cut(s)	1158, 1190
Alw21I	GWGCWC	3 cut(s)	409, 640, 781
Alw26I	GTCTC	2 cut(s)	1101, 1232
Alw44I	GTGCAC	1 cut(s)	405
AlwI	GGATC	2 cut(s)	1116, 1228
AlwNI	CAGNNNCTG	2 cut(s)	214, 1210
Aor13HI	TCCGGA	1 cut(s)	1236
AoxI	GGCC	6 cut(s)	4, 25, 45, 102, 1137, 1413
ApaI	GGGCCC	1 cut(s)	8
ApaLI	GTGCAC	1 cut(s)	405
ApeKI	GCWGC	6 cut(s)	563, 566, 569, 660, 854, 1199
ApoI	RAATTY	3 cut(s)	235, 752, 768
Asp700I	GAANNNNTTC	1 cut(s)	34
AspLEI	GCGC	1 cut(s)	748
AspS9I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
AsuHPI	GGTGA	2 cut(s)	154, 804
AvaII	GGWCC	2 cut(s)	91, 485
AxyI	CCTNAGG	1 cut(s)	1460
BaeGI	GKGCMC	2 cut(s)	8, 409
BaeI	ACNNNNGTAYC	2 cut(s)	702, 735
BanI	GGYRCC	1 cut(s)	396
BanII	GRGCYC	2 cut(s)	8, 781
BauI	CACGAG	1 cut(s)	714
BbsI	GAAGAC	2 cut(s)	23, 620
Bbv12I	GWGCWC	3 cut(s)	409, 640, 781
BbvI	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1211
BccI	CCATC	2 cut(s)	125, 509
BcgI	CGANNNNNNTGC	2 cut(s)	417, 451
BciT130I	CCWGG	4 cut(s)	110, 174, 774, 982
BcoDI	GTCTC	2 cut(s)	1101, 1232
BfaI	CTAG	2 cut(s)	342, 816
BfmI	CTRYAG	2 cut(s)	1197, 1449
BfrI	CTTAAG	1 cut(s)	1117
BisI	GCNGC	9 cut(s)	339, 564, 567, 570, 661, 855, 1137, 1200, 1446
BlpI	GCTNAGC	1 cut(s)	806
BlsI	GCNGC	9 cut(s)	340, 565, 568, 571, 662, 856, 1138, 1201, 1447
BmcAI	AGTACT	1 cut(s)	1110
Bme1390I	CCNGG	4 cut(s)	110, 174, 774, 982
Bme18I	GGWCC	2 cut(s)	91, 485
BmgT120I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
BmiI	GGNNCC	3 cut(s)	6, 93, 398
BmrFI	CCNGG	4 cut(s)	110, 174, 774, 982
BmrI	ACTGGG	1 cut(s)	402
BmsI	GCATC	3 cut(s)	670, 843, 892
BmuI	ACTGGG	1 cut(s)	402
BpiI	GAAGAC	2 cut(s)	23, 620
BpmI	CTGGAG	2 cut(s)	92, 1182
Bpu1102I	GCTNAGC	1 cut(s)	806
BpuEI	CTTGAG	1 cut(s)	942
BsaAI	YACGTR	1 cut(s)	797
BsaHI	GRCGYC	3 cut(s)	114, 141, 1455
BsaJI	CCNNGG	2 cut(s)	99, 400
BsaWI	WCCGGW	2 cut(s)	1052, 1236
BsaXI	ACNNNNNCTCC	2 cut(s)	768, 798
Bsc4I	CCNNNNNNNGG	2 cut(s)	100, 179
Bse118I	RCCGGY	1 cut(s)	23
Bse1I	ACTGG	1 cut(s)	397
Bse21I	CCTNAGG	1 cut(s)	1460
Bse3DI	GCAATG	2 cut(s)	435, 558
BseAI	TCCGGA	1 cut(s)	1236
BseBI	CCWGG	4 cut(s)	110, 174, 774, 982
BseDI	CCNNGG	2 cut(s)	99, 400
BseGI	GGATG	1 cut(s)	1293
BseLI	CCNNNNNNNGG	2 cut(s)	100, 179
BseMI	GCAATG	2 cut(s)	435, 558
BseMII	CTCAG	2 cut(s)	1272, 1451
BseNI	ACTGG	1 cut(s)	397
BseRI	GAGGAG	2 cut(s)	281, 1364
BseSI	GKGCMC	2 cut(s)	8, 409
BseX3I	CGGCCG	1 cut(s)	25
BseXI	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1211
BseYI	CCCAGC	1 cut(s)	1154
Bsh1236I	CGCG	1 cut(s)	748
Bsh1285I	CGRYCG	1 cut(s)	28
BshFI	GGCC	6 cut(s)	6, 27, 47, 104, 1139, 1415
BshNI	GGYRCC	1 cut(s)	396
BsiEI	CGRYCG	1 cut(s)	28
BsiHKAI	GWGCWC	3 cut(s)	409, 640, 781
BsiSI	CCGG	3 cut(s)	24, 1053, 1237
BslI	CCNNNNNNNGG	2 cut(s)	100, 179
BsmAI	GTCTC	2 cut(s)	1101, 1232
BsmI	GAATGC	2 cut(s)	504, 1015
BsnI	GGCC	6 cut(s)	6, 27, 47, 104, 1139, 1415
Bsp120I	GGGCCC	1 cut(s)	4
Bsp1286I	GDGCHC	4 cut(s)	8, 409, 640, 781
Bsp13I	TCCGGA	1 cut(s)	1236
Bsp1407I	TGTACA	1 cut(s)	872
Bsp143I	GATC	4 cut(s)	79, 145, 1121, 1233
Bsp1720I	GCTNAGC	1 cut(s)	806
Bsp19I	CCATGG	1 cut(s)	400
BspACI	CCGC	8 cut(s)	21, 339, 353, 417, 748, 800, 1136, 1446
BspANI	GGCC	6 cut(s)	6, 27, 47, 104, 1139, 1415
BspCNI	CTCAG	2 cut(s)	1271, 1452
BspEI	TCCGGA	1 cut(s)	1236
BspFNI	CGCG	1 cut(s)	748
BspHI	TCATGA	2 cut(s)	445, 1230
BspLI	GGNNCC	3 cut(s)	6, 93, 398
BspMAI	CTGCAG	1 cut(s)	1201
BspPI	GGATC	2 cut(s)	1116, 1228
BspT107I	GGYRCC	1 cut(s)	396
BspTI	CTTAAG	1 cut(s)	1117
BsrDI	GCAATG	2 cut(s)	435, 558
BsrFI	RCCGGY	1 cut(s)	23
BsrGI	TGTACA	1 cut(s)	872
BsrI	ACTGG	1 cut(s)	397
BssAI	RCCGGY	1 cut(s)	23
BssECI	CCNNGG	2 cut(s)	99, 400
BssMI	GATC	4 cut(s)	79, 145, 1121, 1233
BssNI	GRCGYC	3 cut(s)	114, 141, 1455
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	1 cut(s)	400
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	4 cut(s)	110, 174, 774, 982
Bst4CI	ACNGT	5 cut(s)	251, 350, 929, 952, 1384
Bst6I	CTCTTC	1 cut(s)	138
BstACI	GRCGYC	3 cut(s)	114, 141, 1455
BstAFI	CTTAAG	1 cut(s)	1117
BstAUI	TGTACA	1 cut(s)	872
BstBAI	YACGTR	1 cut(s)	797
BstC8I	GCNNGC	3 cut(s)	25, 636, 832
BstDEI	CTNAG	5 cut(s)	381, 641, 806, 1258, 1460
BstDSI	CCRYGG	1 cut(s)	400
BstF5I	GGATG	1 cut(s)	1293
BstFNI	CGCG	1 cut(s)	748
BstHHI	GCGC	1 cut(s)	748
BstKTI	GATC	4 cut(s)	82, 148, 1124, 1236
BstMAI	GTCTC	2 cut(s)	1101, 1232
BstMBI	GATC	4 cut(s)	79, 145, 1121, 1233
BstMCI	CGRYCG	1 cut(s)	28
BstNI	CCWGG	4 cut(s)	110, 174, 774, 982
BstSCI	CCNGG	4 cut(s)	108, 172, 772, 980
BstSFI	CTRYAG	2 cut(s)	1197, 1449
BstSLI	GKGCMC	2 cut(s)	8, 409
BstUI	CGCG	1 cut(s)	748
BstV1I	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1211
BstV2I	GAAGAC	2 cut(s)	23, 620
BstX2I	RGATCY	1 cut(s)	1121
BstXI	CCANNNNNNTGG	1 cut(s)	737
BstYI	RGATCY	1 cut(s)	1121
BstZI	CGGCCG	1 cut(s)	25
Bsu36I	CCTNAGG	1 cut(s)	1460
BsuRI	GGCC	6 cut(s)	6, 27, 47, 104, 1139, 1415
BtgI	CCRYGG	1 cut(s)	400
BtgZI	GCGATG	2 cut(s)	276, 820
BtsCI	GGATG	1 cut(s)	1293
BtsI	GCAGTG	1 cut(s)	550
BtsIMutI	CAGTG	3 cut(s)	215, 550, 1380
Cac8I	GCNNGC	3 cut(s)	25, 636, 832
CaiI	CAGNNNCTG	2 cut(s)	214, 1210
CciI	TCATGA	2 cut(s)	445, 1230
CfoI	GCGC	1 cut(s)	748
Cfr10I	RCCGGY	1 cut(s)	23
Cfr13I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
CseI	GACGC	3 cut(s)	122, 130, 1463
Csp6I	GTAC	2 cut(s)	873, 1109
CspCI	CAANNNNNGTGG	2 cut(s)	477, 512
CviAII	CATG	8 cut(s)	88, 401, 446, 604, 890, 1231, 1351, 1427
CviQI	GTAC	2 cut(s)	873, 1109
DdeI	CTNAG	5 cut(s)	381, 641, 806, 1258, 1460
DpnI	GATC	4 cut(s)	81, 147, 1123, 1235
DpnII	GATC	4 cut(s)	79, 145, 1121, 1233
DraIII	CACNNNGTG	1 cut(s)	1386
DrdI	GACNNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	1076
EaeI	YGGCCR	1 cut(s)	25
EagI	CGGCCG	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	138
EarI	CTCTTC	1 cut(s)	138
Ecl136II	GAGCTC	1 cut(s)	779
EclXI	CGGCCG	1 cut(s)	25
Eco130I	CCWWGG	1 cut(s)	400
Eco147I	AGGCCT	1 cut(s)	47
Eco24I	GRGCYC	2 cut(s)	8, 781
Eco47I	GGWCC	2 cut(s)	91, 485
Eco52I	CGGCCG	1 cut(s)	25
Eco53kI	GAGCTC	1 cut(s)	779
Eco57I	CTGAAG	3 cut(s)	119, 333, 1059
Eco81I	CCTNAGG	1 cut(s)	1460
EcoICRI	GAGCTC	1 cut(s)	779
EcoO109I	RGGNCCY	1 cut(s)	103
EcoRI	GAATTC	2 cut(s)	235, 768
EcoRII	CCWGG	4 cut(s)	108, 172, 772, 980
EcoT14I	CCWWGG	1 cut(s)	400
EcoT22I	ATGCAT	1 cut(s)	920
EcoT38I	GRGCYC	2 cut(s)	8, 781
ErhI	CCWWGG	1 cut(s)	400
FaeI	CATG	8 cut(s)	91, 404, 449, 607, 893, 1234, 1354, 1430
FalI	AAGNNNNNCTT	2 cut(s)	823, 855
FatI	CATG	8 cut(s)	87, 400, 445, 603, 889, 1230, 1350, 1426
FauI	CCCGC	1 cut(s)	793
FauNDI	CATATG	1 cut(s)	914
Fnu4HI	GCNGC	9 cut(s)	339, 564, 567, 570, 661, 855, 1137, 1200, 1446
FokI	GGATG	1 cut(s)	1280
FriOI	GRGCYC	2 cut(s)	8, 781
Fsp4HI	GCNGC	9 cut(s)	339, 564, 567, 570, 661, 855, 1137, 1200, 1446
FspBI	CTAG	2 cut(s)	342, 816
GlaI	GCGC	1 cut(s)	747
GluI	GCNGC	9 cut(s)	339, 564, 567, 570, 661, 855, 1137, 1200, 1446
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	2 cut(s)	92, 1182
HaeIII	GGCC	6 cut(s)	6, 27, 47, 104, 1139, 1415
HapII	CCGG	3 cut(s)	24, 1053, 1237
HgaI	GACGC	3 cut(s)	122, 130, 1463
HhaI	GCGC	1 cut(s)	748
Hin1I	GRCGYC	3 cut(s)	114, 141, 1455
Hin1II	CATG	8 cut(s)	91, 404, 449, 607, 893, 1234, 1354, 1430
Hin6I	GCGC	1 cut(s)	746
HinP1I	GCGC	1 cut(s)	746
HincII	GTYRAC	1 cut(s)	787
HindII	GTYRAC	1 cut(s)	787
HindIII	AAGCTT	2 cut(s)	491, 960
HinfI	GANTC	5 cut(s)	205, 596, 691, 788, 1240
HpaII	CCGG	3 cut(s)	24, 1053, 1237
HphI	GGTGA	2 cut(s)	154, 804
Hpy166II	GTNNAC	4 cut(s)	407, 485, 787, 935
Hpy188I	TCNGA	4 cut(s)	313, 886, 1066, 1261
Hpy188III	TCNNGA	6 cut(s)	61, 215, 321, 446, 1231, 1237
Hpy8I	GTNNAC	4 cut(s)	407, 485, 787, 935
Hpy99I	CGWCG	3 cut(s)	56, 80, 146
HpyAV	CCTTC	9 cut(s)	58, 58, 184, 308, 418, 650, 1018, 1083, 1405
HpyCH4III	ACNGT	5 cut(s)	251, 350, 929, 952, 1384
HpyCH4IV	ACGT	1 cut(s)	796
HpyF3I	CTNAG	5 cut(s)	381, 641, 806, 1258, 1460
HpySE526I	ACGT	1 cut(s)	796
Hsp92I	GRCGYC	3 cut(s)	114, 141, 1455
Hsp92II	CATG	8 cut(s)	91, 404, 449, 607, 893, 1234, 1354, 1430
HspAI	GCGC	1 cut(s)	746
Kpn2I	TCCGGA	1 cut(s)	1236
KroI	GCCGGC	1 cut(s)	23
KroNI	GCCGGC	1 cut(s)	25
Kzo9I	GATC	4 cut(s)	79, 145, 1121, 1233
LmnI	GCTCC	1 cut(s)	776
Lsp1109I	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1211
LweI	GCATC	3 cut(s)	670, 843, 892
MaeI	CTAG	2 cut(s)	342, 816
MaeII	ACGT	1 cut(s)	796
MaeIII	GTNAC	4 cut(s)	160, 279, 438, 586
MalI	GATC	4 cut(s)	81, 147, 1123, 1235
MboI	GATC	4 cut(s)	79, 145, 1121, 1233
MboII	GAAGA	3 cut(s)	28, 125, 625
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	1 cut(s)	1121
MhlI	GDGCHC	4 cut(s)	8, 409, 640, 781
MluCI	AATT	9 cut(s)	235, 307, 359, 752, 762, 768, 1146, 1219, 1399
MlyI	GAGTC	2 cut(s)	605, 782
Mph1103I	ATGCAT	1 cut(s)	920
MroI	TCCGGA	1 cut(s)	1236
MroNI	GCCGGC	1 cut(s)	23
MroXI	GAANNNNTTC	1 cut(s)	34
MseI	TTAA	4 cut(s)	276, 698, 1118, 1317
MslI	CAYNNNNRTG	1 cut(s)	167
MspCI	CTTAAG	1 cut(s)	1117
MspI	CCGG	3 cut(s)	24, 1053, 1237
MspR9I	CCNGG	4 cut(s)	110, 174, 774, 982
MunI	CAATTG	1 cut(s)	1146
Mva1269I	GAATGC	2 cut(s)	504, 1015
MvaI	CCWGG	4 cut(s)	110, 174, 774, 982
MvnI	CGCG	1 cut(s)	748
NaeI	GCCGGC	1 cut(s)	25
NcoI	CCATGG	1 cut(s)	400
NdeI	CATATG	1 cut(s)	914
NdeII	GATC	4 cut(s)	79, 145, 1121, 1233
NgoMIV	GCCGGC	1 cut(s)	23
NlaIII	CATG	8 cut(s)	91, 404, 449, 607, 893, 1234, 1354, 1430
NlaIV	GGNNCC	3 cut(s)	6, 93, 398
NmeAIII	GCCGAG	1 cut(s)	63
NmuCI	GTSAC	1 cut(s)	160
NsiI	ATGCAT	1 cut(s)	920
OliI	CACNNNNGTG	1 cut(s)	167
PagI	TCATGA	2 cut(s)	445, 1230
PceI	AGGCCT	1 cut(s)	47
PcsI	WCGNNNNNNNCGW	1 cut(s)	57
PctI	GAATGC	2 cut(s)	504, 1015
PdiI	GCCGGC	1 cut(s)	25
PdmI	GAANNNNTTC	1 cut(s)	34
PfeI	GAWTC	3 cut(s)	205, 691, 1240
PflFI	GACNNNGTC	1 cut(s)	56
PfoI	TCCNGGA	2 cut(s)	108, 772
PkrI	GCNGC	9 cut(s)	340, 565, 568, 571, 662, 856, 1138, 1201, 1447
PleI	GAGTC	2 cut(s)	604, 782
PpsI	GAGTC	2 cut(s)	604, 782
Ppu21I	YACGTR	1 cut(s)	797
Psp124BI	GAGCTC	1 cut(s)	781
Psp6I	CCWGG	4 cut(s)	108, 172, 772, 980
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	4 cut(s)	108, 172, 772, 980
PspN4I	GGNNCC	3 cut(s)	6, 93, 398
PspOMI	GGGCCC	1 cut(s)	4
PspPI	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
PstI	CTGCAG	1 cut(s)	1201
PstNI	CAGNNNCTG	2 cut(s)	214, 1210
PsuI	RGATCY	1 cut(s)	1121
PsyI	GACNNNGTC	1 cut(s)	56
RsaI	GTAC	2 cut(s)	874, 1110
RsaNI	GTAC	2 cut(s)	873, 1109
RseI	CAYNNNNRTG	1 cut(s)	167
SacI	GAGCTC	1 cut(s)	781
SaqAI	TTAA	4 cut(s)	276, 698, 1118, 1317
SatI	GCNGC	9 cut(s)	339, 564, 567, 570, 661, 855, 1137, 1200, 1446
Sau3AI	GATC	4 cut(s)	79, 145, 1121, 1233
Sau96I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
ScaI	AGTACT	1 cut(s)	1110
SchI	GAGTC	2 cut(s)	605, 782
ScrFI	CCNGG	4 cut(s)	110, 174, 774, 982
SduI	GDGCHC	4 cut(s)	8, 409, 640, 781
SfaNI	GCATC	3 cut(s)	670, 843, 892
SfcI	CTRYAG	2 cut(s)	1197, 1449
SinI	GGWCC	2 cut(s)	91, 485
SmiMI	CAYNNNNRTG	1 cut(s)	167
SmlI	CTYRAG	2 cut(s)	957, 1117
SmoI	CTYRAG	2 cut(s)	957, 1117
Sse9I	AATT	9 cut(s)	235, 307, 359, 752, 762, 768, 1146, 1219, 1399
SseBI	AGGCCT	1 cut(s)	47
SsiI	CCGC	8 cut(s)	21, 339, 353, 417, 748, 800, 1136, 1446
SspI	AATATT	1 cut(s)	537
SspMI	CTAG	2 cut(s)	342, 816
SstI	GAGCTC	1 cut(s)	781
StuI	AGGCCT	1 cut(s)	47
StyD4I	CCNGG	4 cut(s)	108, 172, 772, 980
StyI	CCWWGG	1 cut(s)	400
TaaI	ACNGT	5 cut(s)	251, 350, 929, 952, 1384
TaiI	ACGT	1 cut(s)	799
TaqI	TCGA	5 cut(s)	51, 75, 120, 144, 389
TasI	AATT	9 cut(s)	235, 307, 359, 752, 762, 768, 1146, 1219, 1399
TatI	WGTACW	2 cut(s)	872, 1108
TauI	GCSGC	3 cut(s)	341, 1139, 1448
TfiI	GAWTC	3 cut(s)	205, 691, 1240
Tru1I	TTAA	4 cut(s)	276, 698, 1118, 1317
Tru9I	TTAA	4 cut(s)	276, 698, 1118, 1317
TscAI	CASTG	3 cut(s)	215, 550, 1387
TseFI	GTSAC	1 cut(s)	160
TseI	GCWGC	6 cut(s)	563, 566, 569, 660, 854, 1199
Tsp45I	GTSAC	1 cut(s)	160
TspDTI	ATGAA	5 cut(s)	303, 434, 592, 879, 1058
TspGWI	ACGGA	1 cut(s)	703
TspRI	CASTG	3 cut(s)	215, 550, 1387
Tth111I	GACNNNGTC	1 cut(s)	56
Vha464I	CTTAAG	1 cut(s)	1117
VneI	GTGCAC	1 cut(s)	405
VpaK11BI	GGWCC	2 cut(s)	91, 485
XapI	RAATTY	3 cut(s)	235, 752, 768
XmnI	GAANNNNTTC	1 cut(s)	34
XspI	CTAG	2 cut(s)	342, 816
ZrmI	AGTACT	1 cut(s)	1110
Zsp2I	ATGCAT	1 cut(s)	920

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.