RLG00000016609

phosphoinositide phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0007042
Physical Location & Seq
Reverse (-)
8187451 .. 8196018
8568 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016609

Sequence Viewer

Length: 2541 bp
ATGGCCTCGTCGGAAAATGCGCCGGAGCCGCCGCCGTCCCCCCACGCCGGAGGAGACGAGGAAGTTGTTACTCCTCCTCAGCACATAGATATGCAGAAATTCAGGCTTTACGAGACTCGATCGAACTTTTACATGATTGGAAGGGACAAGAGTAGAACGTATTGGAGGGTACTTAAGATTGAGCGATTGGATCCCTGTGAGCTCAATGTTCTTGAAGATTCTACTACTTATACCGAACGTGAATGTTCTGACCTCTTGAGGCGGGTACATGAAGGGAACAAGGTCACTGGCGGATTGAAGTTTGTCACTACTTGTTACGGCATTATTGGGTTCATTAAATTTCTGGGGCCCTATTACATGCTACTTATAACAAAGAGAAGAAAGATAGGTGCCATTCGTGGCCACGCGGTGTATGCCATCTCCAAAAGTGAAATGATCCCACTTCCAAATTCACCTGTTCAGTGCAGTATCGCTGATTGTAGAGATGAAAACAGATACAAGAAGCTCTTGTGCACAATGGACCTCACAAAGGACTTCTTTTTCAGCTACTCATACAATGTTATGCGTAGTCTTCAAAAGAACATGTGTGATCATAAGATGGGACCTGTTGTTTATGAAACCATGTTCGTCTGGAATGAGTTCTTAACTCGGGGAATAAGGAATCACCTGCAAAATACTGTTTGGACAGTTGCATTGGTTTATGGTTTCTTTAGACAGGCCACTCTCTCTACATCTGGACGTGACTTCAAACTGACCCTCATTGCAAGACGTTCTCGTCACTATGCAGGAACCAGGTATCTAAAACGTGGTGTTAATGAGAAGGGAAGAGTAGCTAATGATGTTGAGACCGAACAGATAGTTTTTGAGGATGTTCCTGAGGGCTTTCCCGTGCAAATAAGTTCTGTTGTACAGAACCGCGGCTCAATCCCTCTCTATTGGTCACAAGAAACATCGCGTTTAAACATTAAACCAGATATAATATTGTCAAAGAAAGATCCAAACTACGAAGCCACTAGGCTTCATTTTGAAAATCTTGCCAAGAGATATGGGAACCCCATAATTATTTTAAATCTCATCAAGACACAGGAAAAAAGGCCTCGAGAGTCCATTCTACGCTCAGAGTTTGCTAATGCAATTGATTTCATTAATAAAGATCTATCTGAGGAGAACCGTCTCAGATTTCTCCACTGGGATTTGCACAAACATTCTCGAAGCAAAGCTATAAATGCTTTACTACTCTTGGGCAAGGTGGCTACATATGCCTTGACTTTAACTGGGTTCTTCTATTGTCAAGTTACACCAGAAATGGGACCCGAGGGCATGATTAATTGGCCTTCATCGGAGAATTTTGACAATTGTATGTCTCCCCAAAGACATTGTGCTAATGGAGATGAGGATGTTGATAGCATAGTGGGGAAACCAACTGGAGGCAGCAACGTTGCAAATGGAAATCATTCTACCAAACCAGCCACATTCCAGAATGGGGTGCTGAGGACCAATTGCATAGACTGCCTTGATCGGACAAATGTTGCACAGTATGCATATGGGTTGGCTGCTCTAGGACACCAGCTTCATTCTTTGGGAGTTTTAGAGAATCCCAAGATAGACCTTGACGATCCCTTGGCGGATGATTTAATGGGATTTTATGAAAGAATGGGTGACACACTTGCACACCAGTATGGTGGTTCAGCTGCTCACAATAAGATATTTTCTGAGAGAAGAGGTCAGTGGAGAGCAGCAACTCAGTCTCAGGAATTCTTCAGAACTCTTCAACGGTATTACAGCAATGCATATATGGATGCACAGAAGCAAGATGCCATTAATATATTTCTCGGGTATTTTCAACCACAGCAAGATAAACCTGCACTCTGGGAACTGGATTCAGACCAGCATTACCATGATGGGAGGCATGGGTCAAAAGACACGGATGAAGATGGATGGTTCGGTTTCAAGAGATCATATTCCGATGGAAACATTCTCCGTCCAAATAGCTCACCTATGTCAGCACCAACTGTTAAGCAGGAGAAATTTACTAACTATCCGGTTTTGCCTGATCAAACTCAACAAAGCAAGATACTTTCAGAATCCTCACCTGAAATATCAACTTGTGAGAGTGATATTGCATATTCAAGGTACACTCCCTCGATGCCTCGCAGACAACTTTTTGGAGAGTTGCAAAGATATCGGTGTCTTGAAAGTGATCATATTTACTATTCTGAACATGGAGATGGGTATAATTTCTCAAACTTTGTGGATCTAGACTGGCTATCTTCCTCTGGGAATTCATGCGAGGAGGAGCCATATGAGAGATCGTCAATACTTACCAACTCACCATTTGAGGGGCTATCATCGGAAAATGTTGTCAACGGAATAATAGGAGATTCTACACCCTCCACAAGTGTGTATGGATCCATCTTGAAGGGAAAGGAGCAAACAGGAACAGGATTATCCTTTAGTAATGGAGAGAGCTCCAACGTTCCTGAAGACTTTCCAGATAGCTTCTCGAACTGGGTCAATTACGGAGAGACACTCTGCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004438 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005811 GO:0005911 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006996 GO:0007033 GO:0007272 GO:0007275 GO:0007399 GO:0007610 GO:0007626 GO:0008150 GO:0008152 GO:0008366 GO:0009506 GO:0009653 GO:0009987 GO:0010008 GO:0010720 GO:0010927 GO:0010975 GO:0010976 GO:0012505 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0022008 GO:0022607 GO:0030054 GO:0030154 GO:0030182 GO:0031090 GO:0031344 GO:0031346 GO:0031410 GO:0031641 GO:0031642 GO:0031644 GO:0031645 GO:0031982 GO:0032288 GO:0032501 GO:0032502 GO:0032989 GO:0034593 GO:0034596 GO:0042552 GO:0042578 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043473 GO:0043812 GO:0044057 GO:0044085 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0046486 GO:0046488 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048646 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051094 GO:0051128 GO:0051130 GO:0051239 GO:0051240 GO:0051241 GO:0051960 GO:0051961 GO:0051962 GO:0052744 GO:0052866 GO:0055044 GO:0060284 GO:0065007 GO:0071704 GO:0071840 GO:0097708 GO:0098588 GO:0098805 GO:0120035 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Syja_N

Protein Analysis

847

Amino Acids

96.3

Weight (kDa)

6.07

Isoelectric Point (pI)

52.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Syja_N PF02383 106 - 404 3.8e-82 SacI homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 368
AarI CACCTGC 1 cut(s) 675
AasI GACNNNNNNGTC 1 cut(s) 774
Acc36I ACCTGC 2 cut(s) 675, 1870
AccB1I GGYRCC 1 cut(s) 389
AccII CGCG 3 cut(s) 407, 918, 955
AciI CCGC 8 cut(s) 29, 32, 262, 291, 407, 916, 918, 1625
AclI AACGTT 2 cut(s) 1437, 2475
AclWI GGATC 8 cut(s) 185, 198, 430, 989, 1610, 2262, 2403, 2416
AcoI YGGCCR 1 cut(s) 400
AcsI RAATTY 7 cut(s) 98, 338, 448, 1345, 1754, 2027, 2281
AcuI CTGAAG 2 cut(s) 1744, 2502
AdeI CACNNNGTG 1 cut(s) 409
AfaI GTAC 4 cut(s) 171, 267, 909, 2135
AfiI CCNNNNNNNGG 6 cut(s) 47, 529, 1307, 1427, 1483, 2339
AflII CTTAAG 1 cut(s) 173
AflIII ACRYGT 1 cut(s) 582
AjiI CACGTC 1 cut(s) 740
AjnI CCWGG 1 cut(s) 791
AleI CACNNNNGTG 1 cut(s) 2399
Alw21I GWGCWC 3 cut(s) 204, 515, 2471
Alw26I GTCTC 7 cut(s) 48, 107, 839, 1178, 1368, 1752, 2519
Alw44I GTGCAC 1 cut(s) 511
AlwI GGATC 8 cut(s) 185, 198, 430, 989, 1610, 2262, 2403, 2416
Ama87I CYCGRG 4 cut(s) 648, 1098, 1313, 1832
AoxI GGCC 6 cut(s) 3, 347, 400, 717, 1094, 1331
ApaI GGGCCC 1 cut(s) 351
ApaLI GTGCAC 1 cut(s) 511
ApeKI GCWGC 4 cut(s) 1431, 1553, 1691, 1736
ApoI RAATTY 7 cut(s) 98, 338, 448, 1345, 1754, 2027, 2281
AseI ATTAAT 3 cut(s) 1146, 1326, 1821
Asp700I GAANNNNTTC 3 cut(s) 638, 1453, 2487
AspLEI GCGC 1 cut(s) 22
AspS9I GGNCC 6 cut(s) 347, 348, 520, 602, 1310, 1494
AsuHPI GGTGA 6 cut(s) 444, 656, 1670, 1986, 2082, 2322
AvaI CYCGRG 4 cut(s) 648, 1098, 1313, 1832
AvaII GGWCC 4 cut(s) 520, 602, 1310, 1494
AxyI CCTNAGG 1 cut(s) 876
BaeGI GKGCMC 2 cut(s) 351, 515
BalI TGGCCA 1 cut(s) 402
BamHI GGATCC 2 cut(s) 190, 2408
BanI GGYRCC 1 cut(s) 389
BanII GRGCYC 3 cut(s) 204, 351, 2471
BbsI GAAGAC 2 cut(s) 563, 2490
Bbv12I GWGCWC 3 cut(s) 204, 515, 2471
BbvCI CCTCAGC 2 cut(s) 78, 1490
BbvI GCAGC 4 cut(s) 1443, 1540, 1678, 1748
BccI CCATC 8 cut(s) 425, 592, 1895, 1928, 1932, 1961, 2222, 2420
BceAI ACGGC 2 cut(s) 19, 334
BcgI CGANNNNNNTGC 2 cut(s) 2165, 2199
BciT130I CCWGG 1 cut(s) 793
BclI TGATCA 3 cut(s) 589, 2053, 2200
BcoDI GTCTC 7 cut(s) 48, 107, 839, 1178, 1368, 1752, 2519
BfaI CTAG 3 cut(s) 1014, 1559, 2258
BfrI CTTAAG 1 cut(s) 173
BfuAI ACCTGC 2 cut(s) 675, 1870
BglII AGATCT 1 cut(s) 1153
BisI GCNGC 7 cut(s) 29, 32, 919, 1432, 1554, 1692, 1737
BlsI GCNGC 7 cut(s) 30, 33, 920, 1433, 1555, 1693, 1738
Bme1390I CCNGG 1 cut(s) 793
Bme18I GGWCC 4 cut(s) 520, 602, 1310, 1494
BmeT110I CYCGRG 4 cut(s) 648, 1098, 1313, 1832
BmgBI CACGTC 1 cut(s) 740
BmgT120I GGNCC 6 cut(s) 347, 348, 520, 602, 1310, 1494
BmrFI CCNGG 1 cut(s) 793
BmrI ACTGGG 3 cut(s) 1198, 1284, 2518
BmsI GCATC 3 cut(s) 1789, 1804, 2136
BmuI ACTGGG 3 cut(s) 1198, 1284, 2518
BpiI GAAGAC 2 cut(s) 563, 2490
BplI GAGNNNNNCTC 1 cut(s) 2514
BpmI CTGGAG 1 cut(s) 1446
Bpu10I CCTNAGC 2 cut(s) 78, 1490
BpuEI CTTGAG 1 cut(s) 277
BsaI GGTCTC 1 cut(s) 839
BsaJI CCNNGG 3 cut(s) 916, 1314, 1620
BsaWI WCCGGW 1 cut(s) 2041
Bsc4I CCNNNNNNNGG 6 cut(s) 47, 529, 1307, 1427, 1483, 2339
Bse1I ACTGG 8 cut(s) 292, 1193, 1279, 1429, 1675, 1881, 2267, 2513
Bse21I CCTNAGG 1 cut(s) 876
Bse3DI GCAATG 2 cut(s) 759, 1792
BseBI CCWGG 1 cut(s) 793
BseDI CCNNGG 3 cut(s) 916, 1314, 1620
BseGI GGATG 6 cut(s) 874, 1402, 1633, 1804, 1933, 1943
BseLI CCNNNNNNNGG 6 cut(s) 47, 529, 1307, 1427, 1483, 2339
BseMI GCAATG 2 cut(s) 759, 1792
BseMII CTCAG 9 cut(s) 92, 867, 1131, 1152, 1189, 1481, 1704, 1757, 1763
BseNI ACTGG 8 cut(s) 292, 1193, 1279, 1429, 1675, 1881, 2267, 2513
BseRI GAGGAG 6 cut(s) 63, 66, 66, 1178, 2306, 2309
BseSI GKGCMC 2 cut(s) 351, 515
BseXI GCAGC 4 cut(s) 1443, 1540, 1678, 1748
BsgI GTGCAG 2 cut(s) 484, 1848
Bsh1236I CGCG 3 cut(s) 407, 918, 955
Bsh1285I CGRYCG 1 cut(s) 122
BshFI GGCC 6 cut(s) 5, 349, 402, 719, 1096, 1333
BshNI GGYRCC 1 cut(s) 389
BsiEI CGRYCG 1 cut(s) 122
BsiHKAI GWGCWC 3 cut(s) 204, 515, 2471
BsiHKCI CYCGRG 4 cut(s) 648, 1098, 1313, 1832
BsiSI CCGG 3 cut(s) 23, 48, 2042
BslFI GGGAC 4 cut(s) 22, 158, 615, 1323
BslI CCNNNNNNNGG 6 cut(s) 47, 529, 1307, 1427, 1483, 2339
BsmAI GTCTC 7 cut(s) 48, 107, 839, 1178, 1368, 1752, 2519
BsmBI CGTCTC 2 cut(s) 48, 1178
BsmFI GGGAC 4 cut(s) 22, 158, 615, 1323
BsnI GGCC 6 cut(s) 5, 349, 402, 719, 1096, 1333
Bso31I GGTCTC 1 cut(s) 839
BsoBI CYCGRG 4 cut(s) 648, 1098, 1313, 1832
Bsp120I GGGCCC 1 cut(s) 347
Bsp1286I GDGCHC 4 cut(s) 204, 351, 515, 2471
Bsp1407I TGTACA 1 cut(s) 907
BspACI CCGC 8 cut(s) 29, 32, 262, 291, 407, 916, 918, 1625
BspANI GGCC 6 cut(s) 5, 349, 402, 719, 1096, 1333
BspCNI CTCAG 9 cut(s) 91, 868, 1130, 1153, 1188, 1482, 1705, 1756, 1762
BspFNI CGCG 3 cut(s) 407, 918, 955
BspMI ACCTGC 2 cut(s) 675, 1870
BspPI GGATC 8 cut(s) 185, 198, 430, 989, 1610, 2262, 2403, 2416
BspT107I GGYRCC 1 cut(s) 389
BspTI CTTAAG 1 cut(s) 173
BspTNI GGTCTC 1 cut(s) 839
BsrDI GCAATG 2 cut(s) 759, 1792
BsrGI TGTACA 1 cut(s) 907
BsrI ACTGG 8 cut(s) 292, 1193, 1279, 1429, 1675, 1881, 2267, 2513
BssECI CCNNGG 3 cut(s) 916, 1314, 1620
BssT1I CCWWGG 1 cut(s) 1620
Bst2UI CCWGG 1 cut(s) 793
Bst4CI ACNGT 6 cut(s) 679, 688, 1172, 1536, 1776, 2014
Bst6I CTCTTC 3 cut(s) 820, 1714, 1773
BstAFI CTTAAG 1 cut(s) 173
BstAPI GCANNNNNTGC 2 cut(s) 1509, 1538
BstAUI TGTACA 1 cut(s) 907
BstDEI CTNAG 9 cut(s) 78, 876, 1117, 1161, 1175, 1490, 1713, 1743, 1749
BstDSI CCRYGG 1 cut(s) 916
BstENI CCTNNNNNAGG 1 cut(s) 527
BstF5I GGATG 6 cut(s) 874, 1402, 1633, 1804, 1933, 1943
BstFNI CGCG 3 cut(s) 407, 918, 955
BstHHI GCGC 1 cut(s) 22
BstMAI GTCTC 7 cut(s) 48, 107, 839, 1178, 1368, 1752, 2519
BstMCI CGRYCG 1 cut(s) 122
BstMWI GCNNNNNNNGC 6 cut(s) 28, 413, 1226, 1259, 1509, 1538
BstNI CCWGG 1 cut(s) 793
BstNSI RCATGY 2 cut(s) 361, 586
BstSCI CCNGG 1 cut(s) 791
BstSLI GKGCMC 2 cut(s) 351, 515
BstUI CGCG 3 cut(s) 407, 918, 955
BstV1I GCAGC 4 cut(s) 1443, 1540, 1678, 1748
BstV2I GAAGAC 2 cut(s) 563, 2490
BstX2I RGATCY 5 cut(s) 190, 994, 1153, 2254, 2408
BstXI CCANNNNNNTGG 1 cut(s) 1682
BstYI RGATCY 5 cut(s) 190, 994, 1153, 2254, 2408
Bsu36I CCTNAGG 1 cut(s) 876
BsuRI GGCC 6 cut(s) 5, 349, 402, 719, 1096, 1333
BtgI CCRYGG 1 cut(s) 916
BtgZI GCGATG 1 cut(s) 936
BtrI CACGTC 1 cut(s) 740
BtsCI GGATG 6 cut(s) 874, 1402, 1633, 1804, 1933, 1943
BtsIMutI CAGTG 5 cut(s) 285, 467, 1186, 1733, 2536
BveI ACCTGC 2 cut(s) 675, 1870
CfoI GCGC 1 cut(s) 22
Cfr13I GGNCC 6 cut(s) 347, 348, 520, 602, 1310, 1494
Cfr42I CCGCGG 1 cut(s) 919
CsiI ACCWGGT 1 cut(s) 791
Csp6I GTAC 4 cut(s) 170, 266, 908, 2134
CspCI CAANNNNNGTGG 2 cut(s) 2232, 2267
CviQI GTAC 4 cut(s) 170, 266, 908, 2134
DdeI CTNAG 9 cut(s) 78, 876, 1117, 1161, 1175, 1490, 1713, 1743, 1749
DraI TTTAAA 2 cut(s) 960, 1068
DraIII CACNNNGTG 1 cut(s) 409
DrdI GACNNNNNNGTC 1 cut(s) 774
DseDI GACNNNNNNGTC 1 cut(s) 774
EaeI YGGCCR 1 cut(s) 400
Eam1104I CTCTTC 3 cut(s) 820, 1714, 1773
EarI CTCTTC 3 cut(s) 820, 1714, 1773
EciI GGCGGA 2 cut(s) 306, 1640
Ecl136II GAGCTC 2 cut(s) 202, 2469
Eco130I CCWWGG 1 cut(s) 1620
Eco147I AGGCCT 1 cut(s) 1096
Eco24I GRGCYC 3 cut(s) 204, 351, 2471
Eco31I GGTCTC 1 cut(s) 839
Eco32I GATATC 1 cut(s) 2183
Eco47I GGWCC 4 cut(s) 520, 602, 1310, 1494
Eco53kI GAGCTC 2 cut(s) 202, 2469
Eco57I CTGAAG 2 cut(s) 1744, 2502
Eco81I CCTNAGG 1 cut(s) 876
Eco88I CYCGRG 4 cut(s) 648, 1098, 1313, 1832
EcoICRI GAGCTC 2 cut(s) 202, 2469
EcoNI CCTNNNNNAGG 1 cut(s) 527
EcoO109I RGGNCCY 4 cut(s) 347, 348, 602, 1310
EcoRI GAATTC 2 cut(s) 1754, 2281
EcoRII CCWGG 1 cut(s) 791
EcoRV GATATC 1 cut(s) 2183
EcoT14I CCWWGG 1 cut(s) 1620
EcoT22I ATGCAT 2 cut(s) 1543, 1792
EcoT38I GRGCYC 3 cut(s) 204, 351, 2471
ErhI CCWWGG 1 cut(s) 1620
Esp3I CGTCTC 2 cut(s) 48, 1178
FalI AAGNNNNNCTT 4 cut(s) 491, 523, 521, 553
FaqI GGGAC 4 cut(s) 22, 158, 615, 1323
FauI CCCGC 1 cut(s) 255
FauNDI CATATG 3 cut(s) 1258, 1543, 2302
FbaI TGATCA 3 cut(s) 589, 2053, 2200
Fnu4HI GCNGC 7 cut(s) 29, 32, 919, 1432, 1554, 1692, 1737
FokI GGATG 6 cut(s) 881, 1409, 1640, 1811, 1940, 1950
FriOI GRGCYC 3 cut(s) 204, 351, 2471
Fsp4HI GCNGC 7 cut(s) 29, 32, 919, 1432, 1554, 1692, 1737
FspBI CTAG 3 cut(s) 1014, 1559, 2258
GlaI GCGC 1 cut(s) 21
GluI GCNGC 7 cut(s) 29, 32, 919, 1432, 1554, 1692, 1737
GsuI CTGGAG 1 cut(s) 1446
HaeIII GGCC 6 cut(s) 5, 349, 402, 719, 1096, 1333
HapII CCGG 3 cut(s) 23, 48, 2042
HhaI GCGC 1 cut(s) 22
Hin6I GCGC 1 cut(s) 20
HinP1I GCGC 1 cut(s) 20
HincII GTYRAC 1 cut(s) 2365
HindII GTYRAC 1 cut(s) 2365
HinfI GANTC 8 cut(s) 115, 218, 661, 1103, 1594, 1880, 2084, 2381
HpaII CCGG 3 cut(s) 23, 48, 2042
HphI GGTGA 6 cut(s) 444, 656, 1670, 1986, 2082, 2322
Hpy166II GTNNAC 3 cut(s) 513, 2136, 2365
Hpy8I GTNNAC 3 cut(s) 513, 2136, 2365
Hpy99I CGWCG 1 cut(s) 13
HpyAV CCTTC 5 cut(s) 135, 266, 814, 1344, 2413
HpyCH4III ACNGT 6 cut(s) 679, 688, 1172, 1536, 1776, 2014
HpyCH4IV ACGT 7 cut(s) 158, 238, 739, 769, 805, 1437, 2475
HpyF10VI GCNNNNNNNGC 6 cut(s) 28, 413, 1226, 1259, 1509, 1538
HpyF3I CTNAG 9 cut(s) 78, 876, 1117, 1161, 1175, 1490, 1713, 1743, 1749
HpySE526I ACGT 7 cut(s) 158, 238, 739, 769, 805, 1437, 2475
HspAI GCGC 1 cut(s) 20
KflI GGGWCCC 1 cut(s) 1310
Ksp22I TGATCA 3 cut(s) 589, 2053, 2200
KspI CCGCGG 1 cut(s) 919
LmnI GCTCC 4 cut(s) 25, 2296, 2428, 2474
Lsp1109I GCAGC 4 cut(s) 1443, 1540, 1678, 1748
LweI GCATC 3 cut(s) 1789, 1804, 2136
MabI ACCWGGT 1 cut(s) 791
MaeI CTAG 3 cut(s) 1014, 1559, 2258
MaeII ACGT 7 cut(s) 158, 238, 739, 769, 805, 1437, 2475
MaeIII GTNAC 9 cut(s) 67, 283, 304, 314, 740, 776, 939, 1294, 1658
MfeI CAATTG 3 cut(s) 1134, 1354, 1498
MflI RGATCY 5 cut(s) 190, 994, 1153, 2254, 2408
MhlI GDGCHC 4 cut(s) 204, 351, 515, 2471
MlsI TGGCCA 1 cut(s) 402
MluNI TGGCCA 1 cut(s) 402
MlyI GAGTC 2 cut(s) 109, 1112
MmeI TCCRAC 1 cut(s) 2496
Mox20I TGGCCA 1 cut(s) 402
Mph1103I ATGCAT 2 cut(s) 1543, 1792
MroXI GAANNNNTTC 3 cut(s) 638, 1453, 2487
MscI TGGCCA 1 cut(s) 402
MslI CAYNNNNRTG 5 cut(s) 89, 1677, 1896, 2226, 2399
Msp20I TGGCCA 1 cut(s) 402
MspA1I CMGCKG 2 cut(s) 918, 1691
MspCI CTTAAG 1 cut(s) 173
MspI CCGG 3 cut(s) 23, 48, 2042
MspR9I CCNGG 1 cut(s) 793
MssI GTTTAAAC 1 cut(s) 960
MunI CAATTG 3 cut(s) 1134, 1354, 1498
MvaI CCWGG 1 cut(s) 793
MvnI CGCG 3 cut(s) 407, 918, 955
MwoI GCNNNNNNNGC 6 cut(s) 28, 413, 1226, 1259, 1509, 1538
NdeI CATATG 3 cut(s) 1258, 1543, 2302
NmuCI GTSAC 6 cut(s) 283, 304, 740, 776, 939, 1658
NsiI ATGCAT 2 cut(s) 1543, 1792
NspI RCATGY 2 cut(s) 361, 586
OliI CACNNNNGTG 1 cut(s) 2399
PaeR7I CTCGAG 1 cut(s) 1098
PaqCI CACCTGC 1 cut(s) 675
PceI AGGCCT 1 cut(s) 1096
PciI ACATGT 1 cut(s) 582
PdmI GAANNNNTTC 3 cut(s) 638, 1453, 2487
PfeI GAWTC 6 cut(s) 218, 661, 1594, 1880, 2084, 2381
PkrI GCNGC 7 cut(s) 30, 33, 920, 1433, 1555, 1693, 1738
Ple19I CGATCG 1 cut(s) 122
PleI GAGTC 2 cut(s) 109, 1111
PmeI GTTTAAAC 1 cut(s) 960
PpsI GAGTC 2 cut(s) 109, 1111
PpuMI RGGWCCY 2 cut(s) 602, 1310
PscI ACATGT 1 cut(s) 582
PshBI ATTAAT 3 cut(s) 1146, 1326, 1821
PsiI TTATAA 1 cut(s) 368
Psp124BI GAGCTC 2 cut(s) 204, 2471
Psp1406I AACGTT 2 cut(s) 1437, 2475
Psp5II RGGWCCY 2 cut(s) 602, 1310
Psp6I CCWGG 1 cut(s) 791
PspGI CCWGG 1 cut(s) 791
PspOMI GGGCCC 1 cut(s) 347
PspPI GGNCC 6 cut(s) 347, 348, 520, 602, 1310, 1494
PspPPI RGGWCCY 2 cut(s) 602, 1310
PsuI RGATCY 5 cut(s) 190, 994, 1153, 2254, 2408
PvuI CGATCG 1 cut(s) 122
PvuII CAGCTG 1 cut(s) 1691
RsaI GTAC 4 cut(s) 171, 267, 909, 2135
RsaNI GTAC 4 cut(s) 170, 266, 908, 2134
RseI CAYNNNNRTG 5 cut(s) 89, 1677, 1896, 2226, 2399
SacI GAGCTC 2 cut(s) 204, 2471
SacII CCGCGG 1 cut(s) 919
SatI GCNGC 7 cut(s) 29, 32, 919, 1432, 1554, 1692, 1737
Sau96I GGNCC 6 cut(s) 347, 348, 520, 602, 1310, 1494
SchI GAGTC 2 cut(s) 109, 1112
ScrFI CCNGG 1 cut(s) 793
SduI GDGCHC 4 cut(s) 204, 351, 515, 2471
SexAI ACCWGGT 1 cut(s) 791
SfaNI GCATC 3 cut(s) 1789, 1804, 2136
Sfr274I CTCGAG 1 cut(s) 1098
Sfr303I CCGCGG 1 cut(s) 919
SgrBI CCGCGG 1 cut(s) 919
SinI GGWCC 4 cut(s) 520, 602, 1310, 1494
SlaI CTCGAG 1 cut(s) 1098
SmiMI CAYNNNNRTG 5 cut(s) 89, 1677, 1896, 2226, 2399
SmlI CTYRAG 3 cut(s) 173, 256, 1098
SmoI CTYRAG 3 cut(s) 173, 256, 1098
SseBI AGGCCT 1 cut(s) 1096
SsiI CCGC 8 cut(s) 29, 32, 262, 291, 407, 916, 918, 1625
SspI AATATT 1 cut(s) 981
SspMI CTAG 3 cut(s) 1014, 1559, 2258
SstI GAGCTC 2 cut(s) 204, 2471
StuI AGGCCT 1 cut(s) 1096
StyD4I CCNGG 1 cut(s) 791
StyI CCWWGG 1 cut(s) 1620
TaaI ACNGT 6 cut(s) 679, 688, 1172, 1536, 1776, 2014
TaiI ACGT 7 cut(s) 161, 241, 742, 772, 808, 1440, 2478
TaqI TCGA 6 cut(s) 118, 122, 1099, 1210, 2144, 2504
TaqII GACCGA 1 cut(s) 863
TatI WGTACW 1 cut(s) 907
TauI GCSGC 3 cut(s) 31, 34, 921
TfiI GAWTC 6 cut(s) 218, 661, 1594, 1880, 2084, 2381
TscAI CASTG 4 cut(s) 292, 467, 1193, 1733
TseFI GTSAC 6 cut(s) 283, 304, 740, 776, 939, 1658
TseI GCWGC 4 cut(s) 1431, 1553, 1691, 1736
Tsp45I GTSAC 6 cut(s) 283, 304, 740, 776, 939, 1658
TspGWI ACGGA 4 cut(s) 1940, 1970, 2382, 2535
TspRI CASTG 4 cut(s) 292, 467, 1193, 1733
Vha464I CTTAAG 1 cut(s) 173
VneI GTGCAC 1 cut(s) 511
VpaK11BI GGWCC 4 cut(s) 520, 602, 1310, 1494
VspI ATTAAT 3 cut(s) 1146, 1326, 1821
XagI CCTNNNNNAGG 1 cut(s) 527
XapI RAATTY 7 cut(s) 98, 338, 448, 1345, 1754, 2027, 2281
XbaI TCTAGA 1 cut(s) 2257
XceI RCATGY 2 cut(s) 361, 586
XhoI CTCGAG 1 cut(s) 1098
XmnI GAANNNNTTC 3 cut(s) 638, 1453, 2487
XspI CTAG 3 cut(s) 1014, 1559, 2258
Zsp2I ATGCAT 2 cut(s) 1543, 1792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.