RLG00000016879

Calcium-dependent protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006979
Physical Location & Seq
Reverse (-)
10900678 .. 10904580
3903 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016879

Sequence Viewer

Length: 1659 bp
ATGGGCGGTTGCTTAACCACGGCCAAGGTCACCGGGTCAAACAGCAACACCACCACAGCCGTCCCCGTCCCCGCCATCGTCAACCACAACCGGAAACAGCCCACCAGGCCGCAGACCACGACCACCGGAAAACAACAGGCCCACCAGCAGAGGAGCAATGAGGCGACCAAGAAGCACAAGAGCAAGCACAGCTCACGGAAGACAGGGGTGATCCCCTGCGGCAAGCGCACAGATTTCGGTTACGATAAGAATTTCGATCGGCGGTACGCGATCGGCAAGTTGTTGGGTCACGGTCAATTTGGGTACACGTATGTCGCCACGGACAGGGCTAATGGGGATCGAGTTGCGGTTAAGAGGATTGATAAGAATAAGATGGTTCTACCTATAGCCGTTGAGGATGTGAAGCGAGAGGTCAAGATATTACAAGCGCTTGCAGGCCATGAGAATGTGGTTCGGTTCTATAATGCATTTGAAGATGATTCTTATGTGTATATAGTGATGGAATTATGTGAAGGGGGCGAGTTGCTGGATCGGATTTTGGAGAAGAAGGACAGCCGTTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGTCATTTGCATGGTCTGGTGCACCGTGACATGAAACCTGAGAATTTTCTTTTTAAGTCGAAAGCATTGGACTCACCCTTGAAGGCGACAGACTTTGGTTTATCAGACTTTATTAAACCCGGGAAGAAGTTTCAAGATATTGTTGGCAGTGCTTACTATGTTGCTCCCGAAGTGTTGAAGCGCAAGTCAGGACCTGAGTCAGATGTTTGGAGCATTGGTGTGATTACCTACATTTTGCTTTGTGGGCGACGCCCATTTTGGGATAAGACCGAAGATGGTATATTTAAGGAGGTCCTAAGGAACAAGCCTGATTTTCGTCGCAAACCATGGCCAACCATTAGCAACAGTGGAAAAGATTTTGTTAAGAAGTTATTGGTGAAGGACCCTCGGGCAAGGCTAACTGCTGCTCAGGCTTTATCACACCCATGGGTTAGAGAAGGAGGAGATGCATCAGACATTCCTATTGATATATCTGTCTTAAATAACATGCGGCAGTTCGTGAGATACAGTCGTTTGAAACAGTTTGCTCTGAGGGCATTAGCTAGCACACTTAATGCAGAGGAGCTGGCTGATCTCAAAGATCAATTTGATGCAATTGATGTGGATAAGAATGGTTCTATTAGTCTTGAAGAAATGAGACAGGCACTCGCTAAAGATATCCCTTGGAAATTGAAAGATTCACGTGTTGTTGAGATTCTAGAAGCGATTGACAGCAACACAGATGGGCTTGTGGATTTCACCGAGTTTGTCGCAGCGACTCTGCATGTGCACCAATTGGAGGAACATGATTCTGAGAAGTGGCAGCAGCTGTCACGTGCAGCTTTTGAGAAATTTGACATAGACAGAGATGGGTATATAACTCCAGATGAACTTAGAATGCACACGGGCCTGAAAGGTTCTATTGATCCACTTCTTGACGAGGCTGACATTGACAAAGATGGGAAGATTAGCCTATCAGAATTCCGTAGGCTCTTAAGAACTGCAAGCATGAGTTCACGAAACGTTACTAGCCCAATTGGTCAACGGAATTCTAGGCAGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0016791 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0023052 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048519 GO:0048583 GO:0048585 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060688 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1900424 GO:1900425 GO:1900618 GO:1901564 GO:1901700 GO:1901701 GO:1905428 GO:2000026 GO:2000032
KEGG Pathways
Metabolic & Signaling
ko04626 ko05145 map04626 map05145
Pfam Domains
Protein Families
EF-hand_1 EF-hand_5 Pkinase

Protein Analysis

553

Amino Acids

62.32

Weight (kDa)

9.12

Isoelectric Point (pI)

35.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 89 - 349 1.6e-70 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 91 - 341 8.2e-29 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 124 - 299 3.5e-06 Kinase-like
EF-hand_7 PF13499 396 - 457 3.5e-12 EF-hand domain pair
EF-hand_5 PF13202 397 - 419 6.9e-06 EF hand
EF-hand_7 PF13499 477 - 530 1.9e-10 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1642
Acc36I ACCTGC 1 cut(s) 1642
AccII CGCG 1 cut(s) 269
AciI CCGC 7 cut(s) 6, 72, 110, 219, 262, 347, 1105
AclI AACGTT 1 cut(s) 1617
AclWI GGATC 4 cut(s) 205, 345, 537, 1514
AcoI YGGCCR 2 cut(s) 21, 944
AcsI RAATTY 5 cut(s) 250, 658, 1445, 1574, 1642
AcvI CACGTG 2 cut(s) 1298, 1430
AcyI GRCGYC 1 cut(s) 865
AfaI GTAC 2 cut(s) 266, 305
AfeI AGCGCT 1 cut(s) 429
AfiI CCNNNNNNNGG 3 cut(s) 324, 874, 1393
AflII CTTAAG 1 cut(s) 1588
AflIII ACRYGT 2 cut(s) 306, 1297
AgsI TTSAA 7 cut(s) 473, 697, 749, 793, 1132, 1244, 1288
AjnI CCWGG 1 cut(s) 104
AluBI AGCT 6 cut(s) 192, 611, 1157, 1180, 1423, 1436
AluI AGCT 6 cut(s) 192, 611, 1157, 1180, 1423, 1436
Alw21I GWGCWC 2 cut(s) 639, 1386
Alw26I GTCTC 1 cut(s) 1246
Alw44I GTGCAC 2 cut(s) 635, 1382
AlwI GGATC 4 cut(s) 205, 345, 537, 1514
AlwNI CAGNNNCTG 2 cut(s) 809, 1423
Ama87I CYCGRG 2 cut(s) 734, 1002
Aor51HI AGCGCT 1 cut(s) 429
AoxI GGCC 6 cut(s) 21, 107, 138, 436, 944, 1501
ApaLI GTGCAC 2 cut(s) 635, 1382
ApeKI GCWGC 7 cut(s) 575, 608, 1019, 1367, 1417, 1420, 1433
ApoI RAATTY 5 cut(s) 250, 658, 1445, 1574, 1642
ArsI GACNNNNNNTTYG 2 cut(s) 855, 887
AspLEI GCGC 3 cut(s) 228, 430, 798
AspS9I GGNCC 5 cut(s) 139, 806, 907, 997, 1501
AsuC2I CCSGG 3 cut(s) 34, 735, 736
AsuHPI GGTGA 5 cut(s) 22, 220, 681, 1003, 1345
AsuNHI GCTAGC 1 cut(s) 1157
AvaI CYCGRG 2 cut(s) 734, 1002
AvaII GGWCC 3 cut(s) 806, 907, 997
AxyI CCTNAGG 1 cut(s) 911
BaeGI GKGCMC 2 cut(s) 639, 1386
BaeI ACNNNNGTAYC 2 cut(s) 1111, 1144
BalI TGGCCA 1 cut(s) 946
BbrPI CACGTG 2 cut(s) 1298, 1430
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 2 cut(s) 639, 1386
BbvI GCAGC 7 cut(s) 587, 620, 1006, 1379, 1429, 1432, 1445
BccI CCATC 7 cut(s) 83, 367, 493, 884, 1331, 1457, 1547
BceAI ACGGC 4 cut(s) 36, 44, 374, 540
BcgI CGANNNNNNTGC 2 cut(s) 217, 251
BciT130I CCWGG 1 cut(s) 106
BcnI CCSGG 3 cut(s) 34, 735, 736
BcoDI GTCTC 1 cut(s) 1246
BfaI CTAG 4 cut(s) 1158, 1313, 1623, 1647
BfmI CTRYAG 1 cut(s) 384
BfoI RGCGCY 1 cut(s) 431
BfrI CTTAAG 1 cut(s) 1588
BfuAI ACCTGC 1 cut(s) 1642
BglI GCCNNNNNGGC 1 cut(s) 106
Bme1390I CCNGG 4 cut(s) 34, 106, 735, 736
Bme18I GGWCC 3 cut(s) 806, 907, 997
BmeT110I CYCGRG 2 cut(s) 734, 1002
BmgT120I GGNCC 5 cut(s) 139, 806, 907, 997, 1501
BmiI GGNNCC 1 cut(s) 999
BmrFI CCNGG 4 cut(s) 34, 106, 735, 736
BmsI GCATC 5 cut(s) 562, 585, 1051, 1073, 1195
BmtI GCTAGC 1 cut(s) 1161
BoxI GACNNNNGTC 1 cut(s) 811
BpiI GAAGAC 1 cut(s) 206
BpmI CTGGAG 1 cut(s) 1461
Bpu10I CCTNAGC 1 cut(s) 1023
BpuEI CTTGAG 1 cut(s) 584
BpuMI CCSGG 3 cut(s) 34, 735, 736
BsaAI YACGTR 3 cut(s) 309, 1298, 1430
BsaHI GRCGYC 1 cut(s) 865
BsaJI CCNNGG 8 cut(s) 18, 24, 318, 734, 941, 1001, 1040, 1277
BsaWI WCCGGW 2 cut(s) 90, 125
BsaXI ACNNNNNCTCC 2 cut(s) 817, 847
Bsc4I CCNNNNNNNGG 3 cut(s) 324, 874, 1393
Bse21I CCTNAGG 1 cut(s) 911
Bse3DI GCAATG 1 cut(s) 163
BseBI CCWGG 1 cut(s) 106
BseDI CCNNGG 8 cut(s) 18, 24, 318, 734, 941, 1001, 1040, 1277
BseGI GGATG 1 cut(s) 403
BseLI CCNNNNNNNGG 3 cut(s) 324, 874, 1393
BseMI GCAATG 1 cut(s) 163
BseMII CTCAG 6 cut(s) 603, 645, 801, 1037, 1136, 1398
BseRI GAGGAG 3 cut(s) 166, 1071, 1190
BseSI GKGCMC 2 cut(s) 639, 1386
BseXI GCAGC 7 cut(s) 587, 620, 1006, 1379, 1429, 1432, 1445
BsgI GTGCAG 1 cut(s) 1452
Bsh1236I CGCG 1 cut(s) 269
Bsh1285I CGRYCG 2 cut(s) 259, 273
BshFI GGCC 6 cut(s) 23, 109, 140, 438, 946, 1503
BsiEI CGRYCG 2 cut(s) 259, 273
BsiHKAI GWGCWC 2 cut(s) 639, 1386
BsiHKCI CYCGRG 2 cut(s) 734, 1002
BsiSI CCGG 4 cut(s) 33, 91, 126, 735
BslFI GGGAC 2 cut(s) 47, 53
BslI CCNNNNNNNGG 3 cut(s) 324, 874, 1393
BsmAI GTCTC 1 cut(s) 1246
BsmFI GGGAC 2 cut(s) 47, 53
BsmI GAATGC 1 cut(s) 1497
BsnI GGCC 6 cut(s) 23, 109, 140, 438, 946, 1503
BsoBI CYCGRG 2 cut(s) 734, 1002
Bsp1286I GDGCHC 2 cut(s) 639, 1386
Bsp143I GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
Bsp19I CCATGG 2 cut(s) 941, 1040
BspACI CCGC 7 cut(s) 6, 72, 110, 219, 262, 347, 1105
BspANI GGCC 6 cut(s) 23, 109, 140, 438, 946, 1503
BspCNI CTCAG 6 cut(s) 604, 646, 802, 1036, 1137, 1399
BspFNI CGCG 1 cut(s) 269
BspLI GGNNCC 1 cut(s) 999
BspMI ACCTGC 1 cut(s) 1642
BspOI GCTAGC 1 cut(s) 1161
BspPI GGATC 4 cut(s) 205, 345, 537, 1514
BspTI CTTAAG 1 cut(s) 1588
BsrDI GCAATG 1 cut(s) 163
BssECI CCNNGG 8 cut(s) 18, 24, 318, 734, 941, 1001, 1040, 1277
BssMI GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
BssNI GRCGYC 1 cut(s) 865
BssT1I CCWWGG 4 cut(s) 24, 941, 1040, 1277
Bst2UI CCWGG 1 cut(s) 106
Bst4CI ACNGT 5 cut(s) 293, 641, 962, 1124, 1137
BstACI GRCGYC 1 cut(s) 865
BstAFI CTTAAG 1 cut(s) 1588
BstBAI YACGTR 3 cut(s) 309, 1298, 1430
BstC8I GCNNGC 7 cut(s) 185, 224, 432, 436, 1159, 1182, 1600
BstDEI CTNAG 8 cut(s) 612, 654, 810, 911, 1023, 1145, 1407, 1487
BstDSI CCRYGG 4 cut(s) 18, 318, 941, 1040
BstEII GGTNACC 1 cut(s) 28
BstF5I GGATG 1 cut(s) 403
BstFNI CGCG 1 cut(s) 269
BstH2I RGCGCY 1 cut(s) 431
BstHHI GCGC 3 cut(s) 228, 430, 798
BstKTI GATC 8 cut(s) 213, 259, 273, 340, 532, 1189, 1198, 1522
BstMAI GTCTC 1 cut(s) 1246
BstMBI GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
BstMCI CGRYCG 2 cut(s) 259, 273
BstMWI GCNNNNNNNGC 6 cut(s) 106, 189, 225, 859, 1025, 1148
BstNI CCWGG 1 cut(s) 106
BstNSI RCATGY 2 cut(s) 1105, 1382
BstPAI GACNNNNGTC 1 cut(s) 811
BstPI GGTNACC 1 cut(s) 28
BstSCI CCNGG 4 cut(s) 32, 104, 733, 734
BstSFI CTRYAG 1 cut(s) 384
BstSLI GKGCMC 2 cut(s) 639, 1386
BstUI CGCG 1 cut(s) 269
BstV1I GCAGC 7 cut(s) 587, 620, 1006, 1379, 1429, 1432, 1445
BstV2I GAAGAC 1 cut(s) 206
Bsu36I CCTNAGG 1 cut(s) 911
BsuRI GGCC 6 cut(s) 23, 109, 140, 438, 946, 1503
BtgI CCRYGG 4 cut(s) 18, 318, 941, 1040
BtsCI GGATG 1 cut(s) 403
BtsI GCAGTG 1 cut(s) 769
BtsIMutI CAGTG 2 cut(s) 769, 967
BveI ACCTGC 1 cut(s) 1642
Cac8I GCNNGC 7 cut(s) 185, 224, 432, 436, 1159, 1182, 1600
CaiI CAGNNNCTG 2 cut(s) 809, 1423
CfoI GCGC 3 cut(s) 228, 430, 798
Cfr13I GGNCC 5 cut(s) 139, 806, 907, 997, 1501
Cfr9I CCCGGG 1 cut(s) 734
CseI GACGC 1 cut(s) 873
Csp6I GTAC 2 cut(s) 265, 304
CspCI CAANNNNNGTGG 2 cut(s) 1197, 1232
CviAII CATG 9 cut(s) 440, 626, 646, 942, 1041, 1102, 1379, 1400, 1603
CviQI GTAC 2 cut(s) 265, 304
DdeI CTNAG 8 cut(s) 612, 654, 810, 911, 1023, 1145, 1407, 1487
DpnI GATC 8 cut(s) 212, 258, 272, 339, 531, 1188, 1197, 1521
DpnII GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
EaeI YGGCCR 2 cut(s) 21, 944
Eco130I CCWWGG 4 cut(s) 24, 941, 1040, 1277
Eco32I GATATC 1 cut(s) 1273
Eco47I GGWCC 3 cut(s) 806, 907, 997
Eco47III AGCGCT 1 cut(s) 429
Eco72I CACGTG 2 cut(s) 1298, 1430
Eco81I CCTNAGG 1 cut(s) 911
Eco88I CYCGRG 2 cut(s) 734, 1002
Eco91I GGTNACC 1 cut(s) 28
EcoO109I RGGNCCY 3 cut(s) 806, 907, 997
EcoO65I GGTNACC 1 cut(s) 28
EcoRI GAATTC 2 cut(s) 1574, 1642
EcoRII CCWGG 1 cut(s) 104
EcoRV GATATC 1 cut(s) 1273
EcoT14I CCWWGG 4 cut(s) 24, 941, 1040, 1277
EcoT22I ATGCAT 2 cut(s) 469, 1066
ErhI CCWWGG 4 cut(s) 24, 941, 1040, 1277
FaeI CATG 9 cut(s) 443, 629, 649, 945, 1044, 1105, 1382, 1403, 1606
FaqI GGGAC 2 cut(s) 47, 53
FatI CATG 9 cut(s) 439, 625, 645, 941, 1040, 1101, 1378, 1399, 1602
FauI CCCGC 1 cut(s) 79
FokI GGATG 1 cut(s) 410
FspBI CTAG 4 cut(s) 1158, 1313, 1623, 1647
GlaI GCGC 3 cut(s) 227, 429, 797
GsuI CTGGAG 1 cut(s) 1461
HaeII RGCGCY 1 cut(s) 431
HaeIII GGCC 6 cut(s) 23, 109, 140, 438, 946, 1503
HapII CCGG 4 cut(s) 33, 91, 126, 735
HgaI GACGC 1 cut(s) 873
HhaI GCGC 3 cut(s) 228, 430, 798
Hin1I GRCGYC 1 cut(s) 865
Hin1II CATG 9 cut(s) 443, 629, 649, 945, 1044, 1105, 1382, 1403, 1606
Hin6I GCGC 3 cut(s) 226, 428, 796
HinP1I GCGC 3 cut(s) 226, 428, 796
HincII GTYRAC 2 cut(s) 82, 1637
HindII GTYRAC 2 cut(s) 82, 1637
HinfI GANTC 7 cut(s) 479, 686, 812, 1292, 1309, 1372, 1403
HpaII CCGG 4 cut(s) 33, 91, 126, 735
HphI GGTGA 5 cut(s) 22, 220, 681, 1003, 1345
Hpy166II GTNNAC 6 cut(s) 82, 306, 637, 1384, 1610, 1637
Hpy188I TCNGA 7 cut(s) 534, 721, 817, 1069, 1146, 1408, 1573
Hpy8I GTNNAC 6 cut(s) 82, 306, 637, 1384, 1610, 1637
Hpy99I CGWCG 2 cut(s) 867, 936
HpyAV CCTTC 5 cut(s) 506, 541, 691, 988, 1046
HpyCH4III ACNGT 5 cut(s) 293, 641, 962, 1124, 1137
HpyCH4IV ACGT 4 cut(s) 308, 1297, 1429, 1617
HpyF10VI GCNNNNNNNGC 6 cut(s) 106, 189, 225, 859, 1025, 1148
HpyF3I CTNAG 8 cut(s) 612, 654, 810, 911, 1023, 1145, 1407, 1487
HpySE526I ACGT 4 cut(s) 308, 1297, 1429, 1617
Hsp92I GRCGYC 1 cut(s) 865
Hsp92II CATG 9 cut(s) 443, 629, 649, 945, 1044, 1105, 1382, 1403, 1606
HspAI GCGC 3 cut(s) 226, 428, 796
Kzo9I GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
LmnI GCTCC 4 cut(s) 153, 784, 825, 1177
Lsp1109I GCAGC 7 cut(s) 587, 620, 1006, 1379, 1429, 1432, 1445
LweI GCATC 5 cut(s) 562, 585, 1051, 1073, 1195
MaeI CTAG 4 cut(s) 1158, 1313, 1623, 1647
MaeII ACGT 4 cut(s) 308, 1297, 1429, 1617
MaeIII GTNAC 6 cut(s) 28, 239, 287, 641, 1425, 1618
MalI GATC 8 cut(s) 212, 258, 272, 339, 531, 1188, 1197, 1521
MboI GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
MboII GAAGA 7 cut(s) 211, 485, 556, 751, 899, 1256, 1570
MfeI CAATTG 3 cut(s) 1209, 1388, 1629
MhlI GDGCHC 2 cut(s) 639, 1386
MlsI TGGCCA 1 cut(s) 946
MluNI TGGCCA 1 cut(s) 946
MlyI GAGTC 3 cut(s) 680, 821, 1366
Mox20I TGGCCA 1 cut(s) 946
Mph1103I ATGCAT 2 cut(s) 469, 1066
MscI TGGCCA 1 cut(s) 946
MseI TTAA 9 cut(s) 14, 351, 669, 729, 900, 978, 1094, 1167, 1589
MslI CAYNNNNRTG 4 cut(s) 444, 624, 833, 1039
Msp20I TGGCCA 1 cut(s) 946
MspA1I CMGCKG 2 cut(s) 611, 1423
MspCI CTTAAG 1 cut(s) 1588
MspI CCGG 4 cut(s) 33, 91, 126, 735
MspR9I CCNGG 4 cut(s) 34, 106, 735, 736
MunI CAATTG 3 cut(s) 1209, 1388, 1629
Mva1269I GAATGC 1 cut(s) 1497
MvaI CCWGG 1 cut(s) 106
MvnI CGCG 1 cut(s) 269
MwoI GCNNNNNNNGC 6 cut(s) 106, 189, 225, 859, 1025, 1148
NciI CCSGG 3 cut(s) 34, 735, 736
NcoI CCATGG 2 cut(s) 941, 1040
NdeII GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
NheI GCTAGC 1 cut(s) 1157
NlaIII CATG 9 cut(s) 443, 629, 649, 945, 1044, 1105, 1382, 1403, 1606
NlaIV GGNNCC 1 cut(s) 999
NmuCI GTSAC 4 cut(s) 28, 287, 641, 1425
NsiI ATGCAT 2 cut(s) 469, 1066
NspI RCATGY 2 cut(s) 1105, 1382
PaqCI CACCTGC 1 cut(s) 1642
PctI GAATGC 1 cut(s) 1497
PfeI GAWTC 4 cut(s) 479, 1292, 1309, 1403
Ple19I CGATCG 2 cut(s) 259, 273
PleI GAGTC 3 cut(s) 680, 820, 1366
PmaCI CACGTG 2 cut(s) 1298, 1430
PmlI CACGTG 2 cut(s) 1298, 1430
PpsI GAGTC 3 cut(s) 680, 820, 1366
Ppu21I YACGTR 3 cut(s) 309, 1298, 1430
PpuMI RGGWCCY 3 cut(s) 806, 907, 997
PshAI GACNNNNGTC 1 cut(s) 811
Psp1406I AACGTT 1 cut(s) 1617
Psp5II RGGWCCY 3 cut(s) 806, 907, 997
Psp6I CCWGG 1 cut(s) 104
PspCI CACGTG 2 cut(s) 1298, 1430
PspEI GGTNACC 1 cut(s) 28
PspGI CCWGG 1 cut(s) 104
PspN4I GGNNCC 1 cut(s) 999
PspPI GGNCC 5 cut(s) 139, 806, 907, 997, 1501
PspPPI RGGWCCY 3 cut(s) 806, 907, 997
PstNI CAGNNNCTG 2 cut(s) 809, 1423
PvuI CGATCG 2 cut(s) 259, 273
PvuII CAGCTG 2 cut(s) 611, 1423
RsaI GTAC 2 cut(s) 266, 305
RsaNI GTAC 2 cut(s) 265, 304
RseI CAYNNNNRTG 4 cut(s) 444, 624, 833, 1039
SaqAI TTAA 9 cut(s) 14, 351, 669, 729, 900, 978, 1094, 1167, 1589
Sau3AI GATC 8 cut(s) 210, 256, 270, 337, 529, 1186, 1195, 1519
Sau96I GGNCC 5 cut(s) 139, 806, 907, 997, 1501
SchI GAGTC 3 cut(s) 680, 821, 1366
ScrFI CCNGG 4 cut(s) 34, 106, 735, 736
SduI GDGCHC 2 cut(s) 639, 1386
SfaNI GCATC 5 cut(s) 562, 585, 1051, 1073, 1195
SfcI CTRYAG 1 cut(s) 384
SinI GGWCC 3 cut(s) 806, 907, 997
SmaI CCCGGG 1 cut(s) 736
SmiMI CAYNNNNRTG 4 cut(s) 444, 624, 833, 1039
SmlI CTYRAG 2 cut(s) 599, 1588
SmoI CTYRAG 2 cut(s) 599, 1588
SsiI CCGC 7 cut(s) 6, 72, 110, 219, 262, 347, 1105
SspMI CTAG 4 cut(s) 1158, 1313, 1623, 1647
StyD4I CCNGG 4 cut(s) 32, 104, 733, 734
StyI CCWWGG 4 cut(s) 24, 941, 1040, 1277
TaaI ACNGT 5 cut(s) 293, 641, 962, 1124, 1137
TaiI ACGT 4 cut(s) 311, 1300, 1432, 1620
TaqI TCGA 3 cut(s) 255, 340, 674
TaqII GACCGA 1 cut(s) 899
TauI GCSGC 3 cut(s) 112, 222, 1108
TfiI GAWTC 4 cut(s) 479, 1292, 1309, 1403
Tru1I TTAA 9 cut(s) 14, 351, 669, 729, 900, 978, 1094, 1167, 1589
Tru9I TTAA 9 cut(s) 14, 351, 669, 729, 900, 978, 1094, 1167, 1589
TscAI CASTG 2 cut(s) 769, 967
TseFI GTSAC 4 cut(s) 28, 287, 641, 1425
TseI GCWGC 7 cut(s) 575, 608, 1019, 1367, 1417, 1420, 1433
Tsp45I GTSAC 4 cut(s) 28, 287, 641, 1425
TspDTI ATGAA 2 cut(s) 662, 1497
TspGWI ACGGA 4 cut(s) 211, 335, 1568, 1654
TspMI CCCGGG 1 cut(s) 734
TspRI CASTG 2 cut(s) 769, 967
Vha464I CTTAAG 1 cut(s) 1588
VneI GTGCAC 2 cut(s) 635, 1382
VpaK11BI GGWCC 3 cut(s) 806, 907, 997
XapI RAATTY 5 cut(s) 250, 658, 1445, 1574, 1642
XbaI TCTAGA 1 cut(s) 1312
XceI RCATGY 2 cut(s) 1105, 1382
XmaI CCCGGG 1 cut(s) 734
XspI CTAG 4 cut(s) 1158, 1313, 1623, 1647
Zsp2I ATGCAT 2 cut(s) 469, 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.