Rh2DG133200

Calcium-dependent protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0006979
Physical Location & Seq
Reverse (-)
11233455 .. 11238128
4674 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG133200.1

Sequence Viewer

Length: 1665 bp
ATGGGCGGTTGCTTAACCACGGCCAAGGTCACCGGGTCAAACAGCAACACCACCACCACCACCACCACACCCGTCCCCGCCGTCGTCAACCACAACCGGAAACAGCCCACCAGGCCGCAGACCACGACCGCCGGAAAACAACAGGCCCACCACCACAGGACCAATGAGGCGACCAAGAAGCACAAGAGCAAGCACAGCTCACGGAAGACTGGGGTGATCCCCTGCGGCAAGCGCACAGATTTCGGTTACGATAAGGATTTCGATCGGCGGTACGCGATCGGCAAGTTGTTGGGTCACGGTCAGTTTGGGTACACGTATGTGGCCACCGACAGGGCTAACGGGAATCGAGTTGCGGTTAAGAGGATTGATAAGAATAAGATGGTTCTACCTATAGCCGTTGAGGATGTGAAGCGAGAGGTCAAGATATTACAAGCGCTTGCAGGCCATGAGAATGTGGTTCAGTTCCATAATGCATTTGAAGATGATTCTTATGTGTTTATAGTGATGGAATTATGTGAAGGGGGTGAGTTGCTGGATCGGATTTTGGAGAAGAAGGACAGCCGTTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGTCATTTGCATGGGCTGGTGCACCGTGACATGAAACCTGAGAATTTTCTTTTTAAGTCGAAAGCATTGGACTCACCCTTGAAGGCGACAGACTTTGGTTTATCAGACTTTATTAAACCAGGGAAGAAGTTTCAAGATATTGTTGGCAGTGCTTACTATGTTGCTCCCGAAGTGTTGAAGCGCAAGTCAGGACCTGAGTCAGATGTTTGGAGCATTGGTGTGATAACCTACATTTTGCTTTGTGGGCGACGCCCATTTTGGGATAAGACCGAAGATGGTATATTTAAGGAGGTCCTAAGGAACAAGCCTGATTTTCGTCGCAAACCATGGCCAACCATTAGCAACAGTGGAAAAGATTTTGTTAAGAAGTTATTGGTGAAGGACCCTCGGGCAAGGCTAACTGCTGCTCAGGCTTTATCACACCCATGGGTTAGAGAAGGAGGAGATGCATCAGACATTCCTATTGATATATCCGTCTTAAATAACATGCGGCAGTTTGTGAGATACAGTCGTTTGAAGCAGTTTGCTCTGAGGGCATTAGCTAGCACACTTAATGCGGAGGAGCTGGCTGATCTCAAAGATCAATTTGATGCAATTGATGTGGATAAGAATGGTTCTATTAGTCTTGAAGAAATGAGACAAGCACTTGCTAAAGATATCCCTTGGAAATTGAAAGATTCACGTGTTGTTGAGATTCTAGAAGCGATTGACAGCAACACAGATGGGCTTGTGGATTTCACTGAGTTTGTCGCAGCAACTCTGCATGTGCACCAATTGGAGGAACATGATTCTGAGAAGTGGCAGCAGCTGTCACGTGCAGCTTTTGAGAAATTCGACATAGACAGAGATGGGTATATAACTCCAGACGAACTTAGAATGCACACGGGCCTGAAAGGTTCTATTGATCCACTTCTTGACGAGGCTGATATTGACAAAGATGGGAAGATTAGCCTATCAGAATTCCGTAGGCTCTTAAGAACTGCAAGCATGAGTTCACGAAACGTTACTAGCCCAATTGGTCAACGGAATTCTAGGCAGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0016791 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0023052 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048519 GO:0048583 GO:0048585 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060688 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1900424 GO:1900425 GO:1900618 GO:1901564 GO:1901700 GO:1901701 GO:1905428 GO:2000026 GO:2000032
KEGG Pathways
Metabolic & Signaling
ko04626 ko05145 map04626 map05145
Pfam Domains
Protein Families
EF-hand_1 EF-hand_5 Pkinase

Protein Analysis

554

Amino Acids

62.47

Weight (kDa)

9.07

Isoelectric Point (pI)

34.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 91 - 351 3.9e-69 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 93 - 343 2.9e-28 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 127 - 301 4.3e-06 Kinase-like
EF-hand_7 PF13499 398 - 459 3.5e-12 EF-hand domain pair
EF-hand_5 PF13202 399 - 421 7e-06 EF hand
EF-hand_7 PF13499 479 - 532 1.9e-10 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1648
Acc36I ACCTGC 1 cut(s) 1648
AccII CGCG 1 cut(s) 275
AciI CCGC 9 cut(s) 6, 78, 116, 129, 225, 268, 353, 1111, 1178
AclI AACGTT 1 cut(s) 1623
AclWI GGATC 3 cut(s) 211, 543, 1520
AcoI YGGCCR 3 cut(s) 21, 321, 950
AcsI RAATTY 4 cut(s) 664, 1451, 1580, 1648
AcvI CACGTG 2 cut(s) 1304, 1436
AcyI GRCGYC 1 cut(s) 871
AfaI GTAC 2 cut(s) 272, 311
AfeI AGCGCT 1 cut(s) 435
AfiI CCNNNNNNNGG 3 cut(s) 330, 880, 1399
AflII CTTAAG 1 cut(s) 1594
AflIII ACRYGT 2 cut(s) 312, 1303
AgsI TTSAA 7 cut(s) 479, 703, 755, 799, 1138, 1250, 1294
AjnI CCWGG 2 cut(s) 110, 739
AleI CACNNNNGTG 1 cut(s) 317
AluBI AGCT 6 cut(s) 198, 617, 1163, 1186, 1429, 1442
AluI AGCT 6 cut(s) 198, 617, 1163, 1186, 1429, 1442
Alw21I GWGCWC 2 cut(s) 645, 1392
Alw26I GTCTC 1 cut(s) 1252
Alw44I GTGCAC 2 cut(s) 641, 1388
AlwI GGATC 3 cut(s) 211, 543, 1520
AlwNI CAGNNNCTG 2 cut(s) 815, 1429
Ama87I CYCGRG 1 cut(s) 1008
Aor51HI AGCGCT 1 cut(s) 435
AoxI GGCC 7 cut(s) 21, 113, 144, 321, 442, 950, 1507
ApaLI GTGCAC 2 cut(s) 641, 1388
ApeKI GCWGC 7 cut(s) 581, 614, 1025, 1373, 1423, 1426, 1439
ApoI RAATTY 4 cut(s) 664, 1451, 1580, 1648
ArsI GACNNNNNNTTYG 2 cut(s) 861, 893
AspLEI GCGC 3 cut(s) 234, 436, 804
AspS9I GGNCC 6 cut(s) 145, 159, 812, 913, 1003, 1507
AsuC2I CCSGG 1 cut(s) 34
AsuHPI GGTGA 5 cut(s) 22, 226, 536, 687, 1009
AsuNHI GCTAGC 1 cut(s) 1163
AvaI CYCGRG 1 cut(s) 1008
AvaII GGWCC 4 cut(s) 159, 812, 913, 1003
AxyI CCTNAGG 1 cut(s) 917
BaeGI GKGCMC 2 cut(s) 645, 1392
BaeI ACNNNNGTAYC 2 cut(s) 1117, 1150
BalI TGGCCA 2 cut(s) 323, 952
BbrPI CACGTG 2 cut(s) 1304, 1436
BbsI GAAGAC 1 cut(s) 212
Bbv12I GWGCWC 2 cut(s) 645, 1392
BbvI GCAGC 7 cut(s) 593, 626, 1012, 1385, 1435, 1438, 1451
BccI CCATC 6 cut(s) 373, 499, 890, 1337, 1463, 1553
BceAI ACGGC 4 cut(s) 36, 65, 380, 546
BcgI CGANNNNNNTGC 2 cut(s) 223, 257
BciT130I CCWGG 2 cut(s) 112, 741
BcnI CCSGG 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 1252
BfaI CTAG 4 cut(s) 1164, 1319, 1629, 1653
BfmI CTRYAG 1 cut(s) 390
BfoI RGCGCY 1 cut(s) 437
BfrI CTTAAG 1 cut(s) 1594
BfuAI ACCTGC 1 cut(s) 1648
BglI GCCNNNNNGGC 1 cut(s) 112
Bme1390I CCNGG 3 cut(s) 34, 112, 741
Bme18I GGWCC 4 cut(s) 159, 812, 913, 1003
BmeT110I CYCGRG 1 cut(s) 1008
BmgT120I GGNCC 6 cut(s) 145, 159, 812, 913, 1003, 1507
BmiI GGNNCC 1 cut(s) 1005
BmrFI CCNGG 3 cut(s) 34, 112, 741
BmrI ACTGGG 1 cut(s) 219
BmsI GCATC 5 cut(s) 568, 591, 1057, 1079, 1201
BmtI GCTAGC 1 cut(s) 1167
BmuI ACTGGG 1 cut(s) 219
BoxI GACNNNNGTC 1 cut(s) 817
BpiI GAAGAC 1 cut(s) 212
BpmI CTGGAG 1 cut(s) 1467
Bpu10I CCTNAGC 1 cut(s) 1029
BpuEI CTTGAG 1 cut(s) 590
BpuMI CCSGG 1 cut(s) 34
BsaAI YACGTR 3 cut(s) 315, 1304, 1436
BsaBI GATNNNNATC 1 cut(s) 261
BsaHI GRCGYC 1 cut(s) 871
BsaJI CCNNGG 7 cut(s) 18, 24, 740, 947, 1007, 1046, 1283
BsaWI WCCGGW 1 cut(s) 96
BsaXI ACNNNNNCTCC 2 cut(s) 823, 853
Bsc4I CCNNNNNNNGG 3 cut(s) 330, 880, 1399
Bse1I ACTGG 1 cut(s) 214
Bse21I CCTNAGG 1 cut(s) 917
Bse8I GATNNNNATC 1 cut(s) 261
BseBI CCWGG 2 cut(s) 112, 741
BseDI CCNNGG 7 cut(s) 18, 24, 740, 947, 1007, 1046, 1283
BseGI GGATG 1 cut(s) 409
BseJI GATNNNNATC 1 cut(s) 261
BseLI CCNNNNNNNGG 3 cut(s) 330, 880, 1399
BseMII CTCAG 7 cut(s) 609, 651, 807, 1043, 1142, 1353, 1404
BseNI ACTGG 1 cut(s) 214
BseRI GAGGAG 2 cut(s) 1077, 1196
BseSI GKGCMC 2 cut(s) 645, 1392
BseXI GCAGC 7 cut(s) 593, 626, 1012, 1385, 1435, 1438, 1451
BsgI GTGCAG 1 cut(s) 1458
Bsh1236I CGCG 1 cut(s) 275
Bsh1285I CGRYCG 3 cut(s) 129, 265, 279
BshFI GGCC 7 cut(s) 23, 115, 146, 323, 444, 952, 1509
BsiEI CGRYCG 3 cut(s) 129, 265, 279
BsiHKAI GWGCWC 2 cut(s) 645, 1392
BsiHKCI CYCGRG 1 cut(s) 1008
BsiSI CCGG 3 cut(s) 33, 97, 132
BslFI GGGAC 1 cut(s) 59
BslI CCNNNNNNNGG 3 cut(s) 330, 880, 1399
BsmAI GTCTC 1 cut(s) 1252
BsmFI GGGAC 1 cut(s) 59
BsmI GAATGC 1 cut(s) 1503
BsnI GGCC 7 cut(s) 23, 115, 146, 323, 444, 952, 1509
BsoBI CYCGRG 1 cut(s) 1008
Bsp1286I GDGCHC 2 cut(s) 645, 1392
Bsp143I GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
Bsp19I CCATGG 2 cut(s) 947, 1046
BspACI CCGC 9 cut(s) 6, 78, 116, 129, 225, 268, 353, 1111, 1178
BspANI GGCC 7 cut(s) 23, 115, 146, 323, 444, 952, 1509
BspCNI CTCAG 7 cut(s) 610, 652, 808, 1042, 1143, 1354, 1405
BspFNI CGCG 1 cut(s) 275
BspLI GGNNCC 1 cut(s) 1005
BspMI ACCTGC 1 cut(s) 1648
BspOI GCTAGC 1 cut(s) 1167
BspPI GGATC 3 cut(s) 211, 543, 1520
BspTI CTTAAG 1 cut(s) 1594
BsrI ACTGG 1 cut(s) 214
BssECI CCNNGG 7 cut(s) 18, 24, 740, 947, 1007, 1046, 1283
BssMI GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
BssNI GRCGYC 1 cut(s) 871
BssT1I CCWWGG 4 cut(s) 24, 947, 1046, 1283
Bst2UI CCWGG 2 cut(s) 112, 741
Bst4CI ACNGT 4 cut(s) 299, 647, 968, 1130
BstACI GRCGYC 1 cut(s) 871
BstAFI CTTAAG 1 cut(s) 1594
BstBAI YACGTR 3 cut(s) 315, 1304, 1436
BstC8I GCNNGC 7 cut(s) 191, 230, 438, 442, 1165, 1188, 1606
BstDEI CTNAG 9 cut(s) 618, 660, 816, 917, 1029, 1151, 1362, 1413, 1493
BstDSI CCRYGG 3 cut(s) 18, 947, 1046
BstEII GGTNACC 1 cut(s) 28
BstF5I GGATG 1 cut(s) 409
BstFNI CGCG 1 cut(s) 275
BstH2I RGCGCY 1 cut(s) 437
BstHHI GCGC 3 cut(s) 234, 436, 804
BstKTI GATC 7 cut(s) 219, 265, 279, 538, 1195, 1204, 1528
BstMAI GTCTC 1 cut(s) 1252
BstMBI GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
BstMCI CGRYCG 3 cut(s) 129, 265, 279
BstMWI GCNNNNNNNGC 6 cut(s) 112, 195, 231, 865, 1031, 1154
BstNI CCWGG 2 cut(s) 112, 741
BstNSI RCATGY 2 cut(s) 1111, 1388
BstPAI GACNNNNGTC 1 cut(s) 817
BstPI GGTNACC 1 cut(s) 28
BstSCI CCNGG 3 cut(s) 32, 110, 739
BstSFI CTRYAG 1 cut(s) 390
BstSLI GKGCMC 2 cut(s) 645, 1392
BstUI CGCG 1 cut(s) 275
BstV1I GCAGC 7 cut(s) 593, 626, 1012, 1385, 1435, 1438, 1451
BstV2I GAAGAC 1 cut(s) 212
Bsu36I CCTNAGG 1 cut(s) 917
BsuRI GGCC 7 cut(s) 23, 115, 146, 323, 444, 952, 1509
BtgI CCRYGG 3 cut(s) 18, 947, 1046
BtsCI GGATG 1 cut(s) 409
BtsI GCAGTG 1 cut(s) 775
BtsIMutI CAGTG 3 cut(s) 775, 973, 1359
BveI ACCTGC 1 cut(s) 1648
Cac8I GCNNGC 7 cut(s) 191, 230, 438, 442, 1165, 1188, 1606
CaiI CAGNNNCTG 2 cut(s) 815, 1429
CfoI GCGC 3 cut(s) 234, 436, 804
Cfr13I GGNCC 6 cut(s) 145, 159, 812, 913, 1003, 1507
CseI GACGC 1 cut(s) 879
Csp6I GTAC 2 cut(s) 271, 310
CspCI CAANNNNNGTGG 2 cut(s) 1203, 1238
CviAII CATG 9 cut(s) 446, 632, 652, 948, 1047, 1108, 1385, 1406, 1609
CviQI GTAC 2 cut(s) 271, 310
DdeI CTNAG 9 cut(s) 618, 660, 816, 917, 1029, 1151, 1362, 1413, 1493
DpnI GATC 7 cut(s) 218, 264, 278, 537, 1194, 1203, 1527
DpnII GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
EaeI YGGCCR 3 cut(s) 21, 321, 950
Eco130I CCWWGG 4 cut(s) 24, 947, 1046, 1283
Eco32I GATATC 1 cut(s) 1279
Eco47I GGWCC 4 cut(s) 159, 812, 913, 1003
Eco47III AGCGCT 1 cut(s) 435
Eco72I CACGTG 2 cut(s) 1304, 1436
Eco81I CCTNAGG 1 cut(s) 917
Eco88I CYCGRG 1 cut(s) 1008
Eco91I GGTNACC 1 cut(s) 28
EcoO109I RGGNCCY 3 cut(s) 812, 913, 1003
EcoO65I GGTNACC 1 cut(s) 28
EcoRI GAATTC 2 cut(s) 1580, 1648
EcoRII CCWGG 2 cut(s) 110, 739
EcoRV GATATC 1 cut(s) 1279
EcoT14I CCWWGG 4 cut(s) 24, 947, 1046, 1283
EcoT22I ATGCAT 2 cut(s) 475, 1072
ErhI CCWWGG 4 cut(s) 24, 947, 1046, 1283
FaeI CATG 9 cut(s) 449, 635, 655, 951, 1050, 1111, 1388, 1409, 1612
FaqI GGGAC 1 cut(s) 59
FatI CATG 9 cut(s) 445, 631, 651, 947, 1046, 1107, 1384, 1405, 1608
FauI CCCGC 1 cut(s) 85
FokI GGATG 1 cut(s) 416
FspBI CTAG 4 cut(s) 1164, 1319, 1629, 1653
GlaI GCGC 3 cut(s) 233, 435, 803
GsuI CTGGAG 1 cut(s) 1467
HaeII RGCGCY 1 cut(s) 437
HaeIII GGCC 7 cut(s) 23, 115, 146, 323, 444, 952, 1509
HapII CCGG 3 cut(s) 33, 97, 132
HgaI GACGC 1 cut(s) 879
HhaI GCGC 3 cut(s) 234, 436, 804
Hin1I GRCGYC 1 cut(s) 871
Hin1II CATG 9 cut(s) 449, 635, 655, 951, 1050, 1111, 1388, 1409, 1612
Hin6I GCGC 3 cut(s) 232, 434, 802
HinP1I GCGC 3 cut(s) 232, 434, 802
HincII GTYRAC 2 cut(s) 88, 1643
HindII GTYRAC 2 cut(s) 88, 1643
HinfI GANTC 7 cut(s) 343, 485, 692, 818, 1298, 1315, 1409
HpaII CCGG 3 cut(s) 33, 97, 132
HphI GGTGA 5 cut(s) 22, 226, 536, 687, 1009
Hpy166II GTNNAC 6 cut(s) 88, 312, 643, 1390, 1616, 1643
Hpy188I TCNGA 7 cut(s) 540, 727, 823, 1075, 1152, 1414, 1579
Hpy188III TCNNGA 9 cut(s) 421, 755, 788, 810, 1247, 1319, 1484, 1535, 1617
Hpy8I GTNNAC 6 cut(s) 88, 312, 643, 1390, 1616, 1643
Hpy99I CGWCG 3 cut(s) 86, 873, 942
HpyAV CCTTC 5 cut(s) 512, 547, 697, 994, 1052
HpyCH4III ACNGT 4 cut(s) 299, 647, 968, 1130
HpyCH4IV ACGT 4 cut(s) 314, 1303, 1435, 1623
HpyF10VI GCNNNNNNNGC 6 cut(s) 112, 195, 231, 865, 1031, 1154
HpyF3I CTNAG 9 cut(s) 618, 660, 816, 917, 1029, 1151, 1362, 1413, 1493
HpySE526I ACGT 4 cut(s) 314, 1303, 1435, 1623
Hsp92I GRCGYC 1 cut(s) 871
Hsp92II CATG 9 cut(s) 449, 635, 655, 951, 1050, 1111, 1388, 1409, 1612
HspAI GCGC 3 cut(s) 232, 434, 802
Kzo9I GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
LmnI GCTCC 3 cut(s) 790, 831, 1183
Lsp1109I GCAGC 7 cut(s) 593, 626, 1012, 1385, 1435, 1438, 1451
LweI GCATC 5 cut(s) 568, 591, 1057, 1079, 1201
MaeI CTAG 4 cut(s) 1164, 1319, 1629, 1653
MaeII ACGT 4 cut(s) 314, 1303, 1435, 1623
MaeIII GTNAC 6 cut(s) 28, 245, 293, 647, 1431, 1624
MalI GATC 7 cut(s) 218, 264, 278, 537, 1194, 1203, 1527
MboI GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
MboII GAAGA 7 cut(s) 217, 491, 562, 757, 905, 1262, 1576
MfeI CAATTG 3 cut(s) 1215, 1394, 1635
MhlI GDGCHC 2 cut(s) 645, 1392
MlsI TGGCCA 2 cut(s) 323, 952
MluNI TGGCCA 2 cut(s) 323, 952
MlyI GAGTC 2 cut(s) 686, 827
Mox20I TGGCCA 2 cut(s) 323, 952
Mph1103I ATGCAT 2 cut(s) 475, 1072
MscI TGGCCA 2 cut(s) 323, 952
MseI TTAA 9 cut(s) 14, 357, 675, 735, 906, 984, 1100, 1173, 1595
MslI CAYNNNNRTG 5 cut(s) 317, 450, 630, 839, 1045
Msp20I TGGCCA 2 cut(s) 323, 952
MspA1I CMGCKG 2 cut(s) 617, 1429
MspCI CTTAAG 1 cut(s) 1594
MspI CCGG 3 cut(s) 33, 97, 132
MspR9I CCNGG 3 cut(s) 34, 112, 741
MunI CAATTG 3 cut(s) 1215, 1394, 1635
Mva1269I GAATGC 1 cut(s) 1503
MvaI CCWGG 2 cut(s) 112, 741
MvnI CGCG 1 cut(s) 275
MwoI GCNNNNNNNGC 6 cut(s) 112, 195, 231, 865, 1031, 1154
NciI CCSGG 1 cut(s) 34
NcoI CCATGG 2 cut(s) 947, 1046
NdeII GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
NheI GCTAGC 1 cut(s) 1163
NlaIII CATG 9 cut(s) 449, 635, 655, 951, 1050, 1111, 1388, 1409, 1612
NlaIV GGNNCC 1 cut(s) 1005
NmuCI GTSAC 4 cut(s) 28, 293, 647, 1431
NsiI ATGCAT 2 cut(s) 475, 1072
NspI RCATGY 2 cut(s) 1111, 1388
OliI CACNNNNGTG 1 cut(s) 317
PaqCI CACCTGC 1 cut(s) 1648
PctI GAATGC 1 cut(s) 1503
PfeI GAWTC 5 cut(s) 343, 485, 1298, 1315, 1409
Ple19I CGATCG 2 cut(s) 265, 279
PleI GAGTC 2 cut(s) 686, 826
PmaCI CACGTG 2 cut(s) 1304, 1436
PmlI CACGTG 2 cut(s) 1304, 1436
PpsI GAGTC 2 cut(s) 686, 826
Ppu21I YACGTR 3 cut(s) 315, 1304, 1436
PpuMI RGGWCCY 3 cut(s) 812, 913, 1003
PshAI GACNNNNGTC 1 cut(s) 817
Psp1406I AACGTT 1 cut(s) 1623
Psp5II RGGWCCY 3 cut(s) 812, 913, 1003
Psp6I CCWGG 2 cut(s) 110, 739
PspCI CACGTG 2 cut(s) 1304, 1436
PspEI GGTNACC 1 cut(s) 28
PspGI CCWGG 2 cut(s) 110, 739
PspN4I GGNNCC 1 cut(s) 1005
PspPI GGNCC 6 cut(s) 145, 159, 812, 913, 1003, 1507
PspPPI RGGWCCY 3 cut(s) 812, 913, 1003
PstNI CAGNNNCTG 2 cut(s) 815, 1429
PvuI CGATCG 2 cut(s) 265, 279
PvuII CAGCTG 2 cut(s) 617, 1429
RsaI GTAC 2 cut(s) 272, 311
RsaNI GTAC 2 cut(s) 271, 310
RseI CAYNNNNRTG 5 cut(s) 317, 450, 630, 839, 1045
SaqAI TTAA 9 cut(s) 14, 357, 675, 735, 906, 984, 1100, 1173, 1595
Sau3AI GATC 7 cut(s) 216, 262, 276, 535, 1192, 1201, 1525
Sau96I GGNCC 6 cut(s) 145, 159, 812, 913, 1003, 1507
SchI GAGTC 2 cut(s) 686, 827
ScrFI CCNGG 3 cut(s) 34, 112, 741
SduI GDGCHC 2 cut(s) 645, 1392
SfaNI GCATC 5 cut(s) 568, 591, 1057, 1079, 1201
SfcI CTRYAG 1 cut(s) 390
SinI GGWCC 4 cut(s) 159, 812, 913, 1003
SmiMI CAYNNNNRTG 5 cut(s) 317, 450, 630, 839, 1045
SmlI CTYRAG 2 cut(s) 605, 1594
SmoI CTYRAG 2 cut(s) 605, 1594
SsiI CCGC 9 cut(s) 6, 78, 116, 129, 225, 268, 353, 1111, 1178
SspMI CTAG 4 cut(s) 1164, 1319, 1629, 1653
StyD4I CCNGG 3 cut(s) 32, 110, 739
StyI CCWWGG 4 cut(s) 24, 947, 1046, 1283
TaaI ACNGT 4 cut(s) 299, 647, 968, 1130
TaiI ACGT 4 cut(s) 317, 1306, 1438, 1626
TaqI TCGA 4 cut(s) 261, 346, 680, 1455
TaqII GACCGA 1 cut(s) 905
TauI GCSGC 3 cut(s) 118, 228, 1114
TfiI GAWTC 5 cut(s) 343, 485, 1298, 1315, 1409
Tru1I TTAA 9 cut(s) 14, 357, 675, 735, 906, 984, 1100, 1173, 1595
Tru9I TTAA 9 cut(s) 14, 357, 675, 735, 906, 984, 1100, 1173, 1595
TscAI CASTG 3 cut(s) 775, 973, 1366
TseFI GTSAC 4 cut(s) 28, 293, 647, 1431
TseI GCWGC 7 cut(s) 581, 614, 1025, 1373, 1423, 1426, 1439
Tsp45I GTSAC 4 cut(s) 28, 293, 647, 1431
TspDTI ATGAA 1 cut(s) 668
TspGWI ACGGA 4 cut(s) 217, 1084, 1574, 1660
TspRI CASTG 3 cut(s) 775, 973, 1366
Vha464I CTTAAG 1 cut(s) 1594
VneI GTGCAC 2 cut(s) 641, 1388
VpaK11BI GGWCC 4 cut(s) 159, 812, 913, 1003
XapI RAATTY 4 cut(s) 664, 1451, 1580, 1648
XbaI TCTAGA 1 cut(s) 1318
XceI RCATGY 2 cut(s) 1111, 1388
XspI CTAG 4 cut(s) 1164, 1319, 1629, 1653
Zsp2I ATGCAT 2 cut(s) 475, 1072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.