Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002487.1

Orthogroup ID

OG0006979

Physical Location & Seq

Genomic Coordinates Reverse (-)

32773 .. 36850

Gene Structure 4078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002487.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

atgggcggttgcttaaccacggccaaggtcaccgggtcaaacagcaacaccaccaccaccaccacaccggtccccgccgtcgtcaaccacaaccggaaacagcccaccaggccgcagaccacgaccgccggaaaacaacaggcccaccaccacaggaccaatgaggcgaccaagaagcacaagagcaagcacagctcacggaagactggggtgatcccctgcggcaagcgcacagatttcggttacgataaggatttcgatcggcggtacgcgatcggcaagttgttgggtcacggtcaatttgggtacacgtatgtggccacggacagggctaacgggaatcgagttgcggttaagaggattgataagaataagatggttctacctatagccgttgaggatgtgaagcgagaggtcaagatattacaagcgcttgcaggccatgagaatgtggttcagttctataatgcatttgaagatgattcttatgtgtatatagtgatggaattatgtgaagggggcgagttactggatcggattttggagaagaaggacagccgttatactgaaaaagatgcagcagtagttgtaaggcagatgctcaaggttgcagctgagtgtcatttgcatggtctggtgcaccgtgacatgaaacctgagaattttctttttaagtcgaaagcattggactcacccttgaaggcgacagactttggtttatcagactttattaaaccagggaagaagtttcaagatattgttggcagtgcttactatgttgctcccgaagtgttgaagcgcaagtcaggacctgagtcagatgtttggagcattggtgtgataacctacattttgctttgtgggcgacgcccattttgggataagaccgaagatggtatttttaaggaggtcctaaggaacaagcctgattttcgtcgcaaaccatggccaaccattagcaacagtggtaaagattttgttaagaagttattggtgaaggaccctcgggcaaggctaactgctgctcaggctttatcacacccatgggttagagaaggaggagatgcatcagacattcctattgatatatccgtcttaaataacatgcggcagttcgtgagatacagtcgtttgaaacagtttgctctgagggcattagctagcacacttaatgcggaggagctggctgatctcaaagatcaatttgatgcaattgatgtggataagaatggttctattagtcttgaagaaatgagacaagcacttgctaaagatatcccttggaaattgaaagattcacgtgttgttgagattctagaagcgattgacagcaacacagatgggcttgtggatttcactgagtttgtcgcagcaactctgcatgtgcaccaattggaggaacatgattctgagaagtggcagcagctgtcacgtgcagcttttgagaaattcgacatagacagagatgggtatataactccagacgaactgagaatgcacacgggcctgaaaggttctattgatccacttcttgacgaggctgatattgacaaagatgggaagattagcctatcagaattccgtaggctcttaagaactgcaagcatgagttcacgaaacgttactagcccaattggtcaacggaattctaggcaggtgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0004721 GO:0004722 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016787 GO:0016788 GO:0016791 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0023052 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043900 GO:0043901 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0048519 GO:0048583 GO:0048585 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060688 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1900424 GO:1900425 GO:1900618 GO:1901564 GO:1901700 GO:1901701 GO:1905428 GO:2000026 GO:2000032

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 Pkinase

Protein Analysis

553

Amino Acids

62.41

Weight (kDa)

9.06

Isoelectric Point (pI)

34.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006979)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36070 AT4G36070 AT5G66210 AT5G66210 AT5G66210 AT5G66210 AT5G66210 AT5G66210
fragaria_vesca	FvH4_1g11780 FvH4_1g11780 FvH4_1g11780 FvH4_1g11780
malus_domestica	MD02G1132100.v1.1 MD15G1245400.v1.1
prunus_persica	Prupe.7G168400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0099401
rosa_laevigata	RLG00000016879
rosa_multiflora	Rmu_sc0002487.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143100
rosa_rugosa	Rorug02G0079400
rosa_samantha	Rh2AG129200 Rh2BG132200 Rh2CG133000 Rh2DG133200
rosa_wichuraiana	Rw2G009950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1645
Acc36I	ACCTGC	1 cut(s)	1645
AccII	CGCG	1 cut(s)	272
AciI	CCGC	9 cut(s)	6, 75, 113, 126, 222, 265, 350, 1108, 1175
AclI	AACGTT	1 cut(s)	1620
AclWI	GGATC	3 cut(s)	208, 540, 1517
AcoI	YGGCCR	3 cut(s)	21, 318, 947
AcsI	RAATTY	4 cut(s)	661, 1448, 1577, 1645
AcvI	CACGTG	2 cut(s)	1301, 1433
AcyI	GRCGYC	1 cut(s)	868
AfaI	GTAC	2 cut(s)	269, 308
AfeI	AGCGCT	1 cut(s)	432
AfiI	CCNNNNNNNGG	3 cut(s)	327, 877, 1396
AflII	CTTAAG	1 cut(s)	1591
AflIII	ACRYGT	2 cut(s)	309, 1300
AgeI	ACCGGT	1 cut(s)	67
AgsI	TTSAA	7 cut(s)	476, 700, 752, 796, 1135, 1247, 1291
AjnI	CCWGG	2 cut(s)	107, 736
AleI	CACNNNNGTG	1 cut(s)	314
AluBI	AGCT	6 cut(s)	195, 614, 1160, 1183, 1426, 1439
AluI	AGCT	6 cut(s)	195, 614, 1160, 1183, 1426, 1439
Alw21I	GWGCWC	2 cut(s)	642, 1389
Alw26I	GTCTC	1 cut(s)	1249
Alw44I	GTGCAC	2 cut(s)	638, 1385
AlwI	GGATC	3 cut(s)	208, 540, 1517
AlwNI	CAGNNNCTG	2 cut(s)	812, 1426
Ama87I	CYCGRG	1 cut(s)	1005
Aor51HI	AGCGCT	1 cut(s)	432
AoxI	GGCC	7 cut(s)	21, 110, 141, 318, 439, 947, 1504
ApaLI	GTGCAC	2 cut(s)	638, 1385
ApeKI	GCWGC	7 cut(s)	578, 611, 1022, 1370, 1420, 1423, 1436
ApoI	RAATTY	4 cut(s)	661, 1448, 1577, 1645
ArsI	GACNNNNNNTTYG	2 cut(s)	858, 890
AsiGI	ACCGGT	1 cut(s)	67
AspLEI	GCGC	3 cut(s)	231, 433, 801
AspS9I	GGNCC	7 cut(s)	70, 142, 156, 809, 910, 1000, 1504
AsuC2I	CCSGG	1 cut(s)	34
AsuHPI	GGTGA	4 cut(s)	22, 223, 684, 1006
AsuNHI	GCTAGC	1 cut(s)	1160
AvaI	CYCGRG	1 cut(s)	1005
AvaII	GGWCC	5 cut(s)	70, 156, 809, 910, 1000
AxyI	CCTNAGG	1 cut(s)	914
BaeGI	GKGCMC	2 cut(s)	642, 1389
BaeI	ACNNNNGTAYC	2 cut(s)	1114, 1147
BalI	TGGCCA	2 cut(s)	320, 949
BbrPI	CACGTG	2 cut(s)	1301, 1433
BbsI	GAAGAC	1 cut(s)	209
Bbv12I	GWGCWC	2 cut(s)	642, 1389
BbvI	GCAGC	7 cut(s)	590, 623, 1009, 1382, 1432, 1435, 1448
BccI	CCATC	6 cut(s)	370, 496, 887, 1334, 1460, 1550
BceAI	ACGGC	4 cut(s)	36, 62, 377, 543
BcgI	CGANNNNNNTGC	2 cut(s)	220, 254
BciT130I	CCWGG	2 cut(s)	109, 738
BcnI	CCSGG	1 cut(s)	34
BcoDI	GTCTC	1 cut(s)	1249
BfaI	CTAG	4 cut(s)	1161, 1316, 1626, 1650
BfmI	CTRYAG	1 cut(s)	387
BfoI	RGCGCY	1 cut(s)	434
BfrI	CTTAAG	1 cut(s)	1591
BfuAI	ACCTGC	1 cut(s)	1645
BglI	GCCNNNNNGGC	1 cut(s)	109
Bme1390I	CCNGG	3 cut(s)	34, 109, 738
Bme18I	GGWCC	5 cut(s)	70, 156, 809, 910, 1000
BmeT110I	CYCGRG	1 cut(s)	1005
BmgT120I	GGNCC	7 cut(s)	70, 142, 156, 809, 910, 1000, 1504
BmiI	GGNNCC	2 cut(s)	72, 1002
BmrFI	CCNGG	3 cut(s)	34, 109, 738
BmrI	ACTGGG	1 cut(s)	216
BmsI	GCATC	5 cut(s)	565, 588, 1054, 1076, 1198
BmtI	GCTAGC	1 cut(s)	1164
BmuI	ACTGGG	1 cut(s)	216
BoxI	GACNNNNGTC	1 cut(s)	814
BpiI	GAAGAC	1 cut(s)	209
BpmI	CTGGAG	1 cut(s)	1464
Bpu10I	CCTNAGC	1 cut(s)	1026
BpuEI	CTTGAG	1 cut(s)	587
BpuMI	CCSGG	1 cut(s)	34
BsaAI	YACGTR	3 cut(s)	312, 1301, 1433
BsaBI	GATNNNNATC	1 cut(s)	258
BsaHI	GRCGYC	1 cut(s)	868
BsaJI	CCNNGG	8 cut(s)	18, 24, 321, 737, 944, 1004, 1043, 1280
BsaWI	WCCGGW	2 cut(s)	67, 93
BsaXI	ACNNNNNCTCC	2 cut(s)	820, 850
Bsc4I	CCNNNNNNNGG	3 cut(s)	327, 877, 1396
Bse118I	RCCGGY	1 cut(s)	67
Bse1I	ACTGG	2 cut(s)	211, 534
Bse21I	CCTNAGG	1 cut(s)	914
Bse8I	GATNNNNATC	1 cut(s)	258
BseBI	CCWGG	2 cut(s)	109, 738
BseDI	CCNNGG	8 cut(s)	18, 24, 321, 737, 944, 1004, 1043, 1280
BseGI	GGATG	1 cut(s)	406
BseJI	GATNNNNATC	1 cut(s)	258
BseLI	CCNNNNNNNGG	3 cut(s)	327, 877, 1396
BseMII	CTCAG	8 cut(s)	606, 648, 804, 1040, 1139, 1350, 1401, 1481
BseNI	ACTGG	2 cut(s)	211, 534
BseRI	GAGGAG	2 cut(s)	1074, 1193
BseSI	GKGCMC	2 cut(s)	642, 1389
BseXI	GCAGC	7 cut(s)	590, 623, 1009, 1382, 1432, 1435, 1448
BsgI	GTGCAG	1 cut(s)	1455
Bsh1236I	CGCG	1 cut(s)	272
Bsh1285I	CGRYCG	3 cut(s)	126, 262, 276
BshFI	GGCC	7 cut(s)	23, 112, 143, 320, 441, 949, 1506
BshTI	ACCGGT	1 cut(s)	67
BsiEI	CGRYCG	3 cut(s)	126, 262, 276
BsiHKAI	GWGCWC	2 cut(s)	642, 1389
BsiHKCI	CYCGRG	1 cut(s)	1005
BsiSI	CCGG	4 cut(s)	33, 68, 94, 129
BslFI	GGGAC	1 cut(s)	56
BslI	CCNNNNNNNGG	3 cut(s)	327, 877, 1396
BsmAI	GTCTC	1 cut(s)	1249
BsmFI	GGGAC	1 cut(s)	56
BsmI	GAATGC	1 cut(s)	1500
BsnI	GGCC	7 cut(s)	23, 112, 143, 320, 441, 949, 1506
BsoBI	CYCGRG	1 cut(s)	1005
Bsp1286I	GDGCHC	2 cut(s)	642, 1389
Bsp143I	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
Bsp19I	CCATGG	2 cut(s)	944, 1043
BspACI	CCGC	9 cut(s)	6, 75, 113, 126, 222, 265, 350, 1108, 1175
BspANI	GGCC	7 cut(s)	23, 112, 143, 320, 441, 949, 1506
BspCNI	CTCAG	8 cut(s)	607, 649, 805, 1039, 1140, 1351, 1402, 1482
BspFNI	CGCG	1 cut(s)	272
BspLI	GGNNCC	2 cut(s)	72, 1002
BspMI	ACCTGC	1 cut(s)	1645
BspOI	GCTAGC	1 cut(s)	1164
BspPI	GGATC	3 cut(s)	208, 540, 1517
BspTI	CTTAAG	1 cut(s)	1591
BsrFI	RCCGGY	1 cut(s)	67
BsrI	ACTGG	2 cut(s)	211, 534
BssAI	RCCGGY	1 cut(s)	67
BssECI	CCNNGG	8 cut(s)	18, 24, 321, 737, 944, 1004, 1043, 1280
BssMI	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
BssNI	GRCGYC	1 cut(s)	868
BssT1I	CCWWGG	4 cut(s)	24, 944, 1043, 1280
Bst2UI	CCWGG	2 cut(s)	109, 738
Bst4CI	ACNGT	5 cut(s)	296, 644, 965, 1127, 1140
BstACI	GRCGYC	1 cut(s)	868
BstAFI	CTTAAG	1 cut(s)	1591
BstBAI	YACGTR	3 cut(s)	312, 1301, 1433
BstC8I	GCNNGC	7 cut(s)	188, 227, 435, 439, 1162, 1185, 1603
BstDEI	CTNAG	9 cut(s)	615, 657, 813, 914, 1026, 1148, 1359, 1410, 1490
BstDSI	CCRYGG	4 cut(s)	18, 321, 944, 1043
BstEII	GGTNACC	1 cut(s)	28
BstF5I	GGATG	1 cut(s)	406
BstFNI	CGCG	1 cut(s)	272
BstH2I	RGCGCY	1 cut(s)	434
BstHHI	GCGC	3 cut(s)	231, 433, 801
BstKTI	GATC	7 cut(s)	216, 262, 276, 535, 1192, 1201, 1525
BstMAI	GTCTC	1 cut(s)	1249
BstMBI	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
BstMCI	CGRYCG	3 cut(s)	126, 262, 276
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 192, 228, 862, 1028, 1151
BstNI	CCWGG	2 cut(s)	109, 738
BstNSI	RCATGY	2 cut(s)	1108, 1385
BstPAI	GACNNNNGTC	1 cut(s)	814
BstPI	GGTNACC	1 cut(s)	28
BstSCI	CCNGG	3 cut(s)	32, 107, 736
BstSFI	CTRYAG	1 cut(s)	387
BstSLI	GKGCMC	2 cut(s)	642, 1389
BstUI	CGCG	1 cut(s)	272
BstV1I	GCAGC	7 cut(s)	590, 623, 1009, 1382, 1432, 1435, 1448
BstV2I	GAAGAC	1 cut(s)	209
Bsu36I	CCTNAGG	1 cut(s)	914
BsuRI	GGCC	7 cut(s)	23, 112, 143, 320, 441, 949, 1506
BtgI	CCRYGG	4 cut(s)	18, 321, 944, 1043
BtsCI	GGATG	1 cut(s)	406
BtsI	GCAGTG	1 cut(s)	772
BtsIMutI	CAGTG	3 cut(s)	772, 970, 1356
BveI	ACCTGC	1 cut(s)	1645
Cac8I	GCNNGC	7 cut(s)	188, 227, 435, 439, 1162, 1185, 1603
CaiI	CAGNNNCTG	2 cut(s)	812, 1426
CfoI	GCGC	3 cut(s)	231, 433, 801
Cfr10I	RCCGGY	1 cut(s)	67
Cfr13I	GGNCC	7 cut(s)	70, 142, 156, 809, 910, 1000, 1504
CseI	GACGC	1 cut(s)	876
Csp6I	GTAC	2 cut(s)	268, 307
CspAI	ACCGGT	1 cut(s)	67
CspCI	CAANNNNNGTGG	2 cut(s)	1200, 1235
CviAII	CATG	9 cut(s)	443, 629, 649, 945, 1044, 1105, 1382, 1403, 1606
CviQI	GTAC	2 cut(s)	268, 307
DdeI	CTNAG	9 cut(s)	615, 657, 813, 914, 1026, 1148, 1359, 1410, 1490
DpnI	GATC	7 cut(s)	215, 261, 275, 534, 1191, 1200, 1524
DpnII	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
EaeI	YGGCCR	3 cut(s)	21, 318, 947
Eco130I	CCWWGG	4 cut(s)	24, 944, 1043, 1280
Eco32I	GATATC	1 cut(s)	1276
Eco47I	GGWCC	5 cut(s)	70, 156, 809, 910, 1000
Eco47III	AGCGCT	1 cut(s)	432
Eco72I	CACGTG	2 cut(s)	1301, 1433
Eco81I	CCTNAGG	1 cut(s)	914
Eco88I	CYCGRG	1 cut(s)	1005
Eco91I	GGTNACC	1 cut(s)	28
EcoO109I	RGGNCCY	3 cut(s)	809, 910, 1000
EcoO65I	GGTNACC	1 cut(s)	28
EcoRI	GAATTC	2 cut(s)	1577, 1645
EcoRII	CCWGG	2 cut(s)	107, 736
EcoRV	GATATC	1 cut(s)	1276
EcoT14I	CCWWGG	4 cut(s)	24, 944, 1043, 1280
EcoT22I	ATGCAT	2 cut(s)	472, 1069
ErhI	CCWWGG	4 cut(s)	24, 944, 1043, 1280
FaeI	CATG	9 cut(s)	446, 632, 652, 948, 1047, 1108, 1385, 1406, 1609
FaqI	GGGAC	1 cut(s)	56
FatI	CATG	9 cut(s)	442, 628, 648, 944, 1043, 1104, 1381, 1402, 1605
FauI	CCCGC	1 cut(s)	82
FokI	GGATG	1 cut(s)	413
FspBI	CTAG	4 cut(s)	1161, 1316, 1626, 1650
GlaI	GCGC	3 cut(s)	230, 432, 800
GsuI	CTGGAG	1 cut(s)	1464
HaeII	RGCGCY	1 cut(s)	434
HaeIII	GGCC	7 cut(s)	23, 112, 143, 320, 441, 949, 1506
HapII	CCGG	4 cut(s)	33, 68, 94, 129
HgaI	GACGC	1 cut(s)	876
HhaI	GCGC	3 cut(s)	231, 433, 801
Hin1I	GRCGYC	1 cut(s)	868
Hin1II	CATG	9 cut(s)	446, 632, 652, 948, 1047, 1108, 1385, 1406, 1609
Hin6I	GCGC	3 cut(s)	229, 431, 799
HinP1I	GCGC	3 cut(s)	229, 431, 799
HincII	GTYRAC	2 cut(s)	85, 1640
HindII	GTYRAC	2 cut(s)	85, 1640
HinfI	GANTC	7 cut(s)	340, 482, 689, 815, 1295, 1312, 1406
HpaII	CCGG	4 cut(s)	33, 68, 94, 129
HphI	GGTGA	4 cut(s)	22, 223, 684, 1006
Hpy166II	GTNNAC	6 cut(s)	85, 309, 640, 1387, 1613, 1640
Hpy188I	TCNGA	7 cut(s)	537, 724, 820, 1072, 1149, 1411, 1576
Hpy8I	GTNNAC	6 cut(s)	85, 309, 640, 1387, 1613, 1640
Hpy99I	CGWCG	3 cut(s)	83, 870, 939
HpyAV	CCTTC	5 cut(s)	509, 544, 694, 991, 1049
HpyCH4III	ACNGT	5 cut(s)	296, 644, 965, 1127, 1140
HpyCH4IV	ACGT	4 cut(s)	311, 1300, 1432, 1620
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 192, 228, 862, 1028, 1151
HpyF3I	CTNAG	9 cut(s)	615, 657, 813, 914, 1026, 1148, 1359, 1410, 1490
HpySE526I	ACGT	4 cut(s)	311, 1300, 1432, 1620
Hsp92I	GRCGYC	1 cut(s)	868
Hsp92II	CATG	9 cut(s)	446, 632, 652, 948, 1047, 1108, 1385, 1406, 1609
HspAI	GCGC	3 cut(s)	229, 431, 799
Kzo9I	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
LmnI	GCTCC	3 cut(s)	787, 828, 1180
Lsp1109I	GCAGC	7 cut(s)	590, 623, 1009, 1382, 1432, 1435, 1448
LweI	GCATC	5 cut(s)	565, 588, 1054, 1076, 1198
MaeI	CTAG	4 cut(s)	1161, 1316, 1626, 1650
MaeII	ACGT	4 cut(s)	311, 1300, 1432, 1620
MaeIII	GTNAC	7 cut(s)	28, 242, 290, 525, 644, 1428, 1621
MalI	GATC	7 cut(s)	215, 261, 275, 534, 1191, 1200, 1524
MboI	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
MboII	GAAGA	7 cut(s)	214, 488, 559, 754, 902, 1259, 1573
MfeI	CAATTG	3 cut(s)	1212, 1391, 1632
MhlI	GDGCHC	2 cut(s)	642, 1389
MlsI	TGGCCA	2 cut(s)	320, 949
MluNI	TGGCCA	2 cut(s)	320, 949
MlyI	GAGTC	2 cut(s)	683, 824
Mox20I	TGGCCA	2 cut(s)	320, 949
Mph1103I	ATGCAT	2 cut(s)	472, 1069
MscI	TGGCCA	2 cut(s)	320, 949
MseI	TTAA	9 cut(s)	14, 354, 672, 732, 903, 981, 1097, 1170, 1592
MslI	CAYNNNNRTG	5 cut(s)	314, 447, 627, 836, 1042
Msp20I	TGGCCA	2 cut(s)	320, 949
MspA1I	CMGCKG	2 cut(s)	614, 1426
MspCI	CTTAAG	1 cut(s)	1591
MspI	CCGG	4 cut(s)	33, 68, 94, 129
MspR9I	CCNGG	3 cut(s)	34, 109, 738
MunI	CAATTG	3 cut(s)	1212, 1391, 1632
Mva1269I	GAATGC	1 cut(s)	1500
MvaI	CCWGG	2 cut(s)	109, 738
MvnI	CGCG	1 cut(s)	272
MwoI	GCNNNNNNNGC	6 cut(s)	109, 192, 228, 862, 1028, 1151
NciI	CCSGG	1 cut(s)	34
NcoI	CCATGG	2 cut(s)	944, 1043
NdeII	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
NheI	GCTAGC	1 cut(s)	1160
NlaIII	CATG	9 cut(s)	446, 632, 652, 948, 1047, 1108, 1385, 1406, 1609
NlaIV	GGNNCC	2 cut(s)	72, 1002
NmuCI	GTSAC	4 cut(s)	28, 290, 644, 1428
NsiI	ATGCAT	2 cut(s)	472, 1069
NspI	RCATGY	2 cut(s)	1108, 1385
OliI	CACNNNNGTG	1 cut(s)	314
PaqCI	CACCTGC	1 cut(s)	1645
PctI	GAATGC	1 cut(s)	1500
PfeI	GAWTC	5 cut(s)	340, 482, 1295, 1312, 1406
PinAI	ACCGGT	1 cut(s)	67
Ple19I	CGATCG	2 cut(s)	262, 276
PleI	GAGTC	2 cut(s)	683, 823
PmaCI	CACGTG	2 cut(s)	1301, 1433
PmlI	CACGTG	2 cut(s)	1301, 1433
PpsI	GAGTC	2 cut(s)	683, 823
Ppu21I	YACGTR	3 cut(s)	312, 1301, 1433
PpuMI	RGGWCCY	3 cut(s)	809, 910, 1000
PshAI	GACNNNNGTC	1 cut(s)	814
Psp1406I	AACGTT	1 cut(s)	1620
Psp5II	RGGWCCY	3 cut(s)	809, 910, 1000
Psp6I	CCWGG	2 cut(s)	107, 736
PspCI	CACGTG	2 cut(s)	1301, 1433
PspEI	GGTNACC	1 cut(s)	28
PspGI	CCWGG	2 cut(s)	107, 736
PspN4I	GGNNCC	2 cut(s)	72, 1002
PspPI	GGNCC	7 cut(s)	70, 142, 156, 809, 910, 1000, 1504
PspPPI	RGGWCCY	3 cut(s)	809, 910, 1000
PstNI	CAGNNNCTG	2 cut(s)	812, 1426
PvuI	CGATCG	2 cut(s)	262, 276
PvuII	CAGCTG	2 cut(s)	614, 1426
RsaI	GTAC	2 cut(s)	269, 308
RsaNI	GTAC	2 cut(s)	268, 307
RseI	CAYNNNNRTG	5 cut(s)	314, 447, 627, 836, 1042
SaqAI	TTAA	9 cut(s)	14, 354, 672, 732, 903, 981, 1097, 1170, 1592
Sau3AI	GATC	7 cut(s)	213, 259, 273, 532, 1189, 1198, 1522
Sau96I	GGNCC	7 cut(s)	70, 142, 156, 809, 910, 1000, 1504
SchI	GAGTC	2 cut(s)	683, 824
ScrFI	CCNGG	3 cut(s)	34, 109, 738
SduI	GDGCHC	2 cut(s)	642, 1389
SfaNI	GCATC	5 cut(s)	565, 588, 1054, 1076, 1198
SfcI	CTRYAG	1 cut(s)	387
SinI	GGWCC	5 cut(s)	70, 156, 809, 910, 1000
SmiMI	CAYNNNNRTG	5 cut(s)	314, 447, 627, 836, 1042
SmlI	CTYRAG	2 cut(s)	602, 1591
SmoI	CTYRAG	2 cut(s)	602, 1591
SsiI	CCGC	9 cut(s)	6, 75, 113, 126, 222, 265, 350, 1108, 1175
SspMI	CTAG	4 cut(s)	1161, 1316, 1626, 1650
StyD4I	CCNGG	3 cut(s)	32, 107, 736
StyI	CCWWGG	4 cut(s)	24, 944, 1043, 1280
TaaI	ACNGT	5 cut(s)	296, 644, 965, 1127, 1140
TaiI	ACGT	4 cut(s)	314, 1303, 1435, 1623
TaqI	TCGA	4 cut(s)	258, 343, 677, 1452
TaqII	GACCGA	1 cut(s)	902
TauI	GCSGC	3 cut(s)	115, 225, 1111
TfiI	GAWTC	5 cut(s)	340, 482, 1295, 1312, 1406
Tru1I	TTAA	9 cut(s)	14, 354, 672, 732, 903, 981, 1097, 1170, 1592
Tru9I	TTAA	9 cut(s)	14, 354, 672, 732, 903, 981, 1097, 1170, 1592
TscAI	CASTG	3 cut(s)	772, 970, 1363
TseFI	GTSAC	4 cut(s)	28, 290, 644, 1428
TseI	GCWGC	7 cut(s)	578, 611, 1022, 1370, 1420, 1423, 1436
Tsp45I	GTSAC	4 cut(s)	28, 290, 644, 1428
TspDTI	ATGAA	1 cut(s)	665
TspGWI	ACGGA	5 cut(s)	214, 338, 1081, 1571, 1657
TspRI	CASTG	3 cut(s)	772, 970, 1363
Vha464I	CTTAAG	1 cut(s)	1591
VneI	GTGCAC	2 cut(s)	638, 1385
VpaK11BI	GGWCC	5 cut(s)	70, 156, 809, 910, 1000
XapI	RAATTY	4 cut(s)	661, 1448, 1577, 1645
XbaI	TCTAGA	1 cut(s)	1315
XceI	RCATGY	2 cut(s)	1108, 1385
XspI	CTAG	4 cut(s)	1161, 1316, 1626, 1650
Zsp2I	ATGCAT	2 cut(s)	472, 1069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.