Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0014641

Physical Location & Seq

Genomic Coordinates Forward (+)

22430927 .. 22437253

Gene Structure 6327 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017861

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2469 bp

ATGGAAGGTCAAGAAGAGAAGGTTTACGTTGCACTTGGGAACCAGCTGCTGGATGGAATCAAGACTTTGGAGTGGACTTTGAGGAAGTGGAGATTTCAGCCGATTTCGATTGTTATCCTTCATGTAACCAACAGTGTTTCTGCCAAAGATTATGTTTCCACCCCATTTGGGAAGCTGCCTGCAAGTTCTGTGAGTGATGAGAAACTGAAGATCCTGAGGAGGCTTGAGCAAGACAAAATTGACAAAATCCTTTCCATGTACATAAATTTCTGTCGCAAGGCTAGGGTGAAGGCTGAGATACTCAACGTGGAGAGATATGATGACCCTATTCATATGCAAATCCTAGATCTGATTTCGGGACTTCATATAACCAAATTGGTGATGGGATTTTTGTTCATGAAATCATCTTCATGGAAACCAAAAACCGTAATCAGTGGATCATTTCACATCCATCAGCACAAGCCGGAATCTTGTGAATTATTCATAATATGTGGTGGAAAGGAGGTATTTCTAAGAGGAGAAAATAATGATCAAAGAATATCAATGGAAGATGATCAAGGAGCCATGGTTGCAACAATGAAAGACAGGGTCAGTATCAAATTTATCATAGGAAGTATGTTCGGAAGTCGTCAAAGCTCACCTGTTTCATCAACAAGAAATCATTCATCCAGTTTCGAAAATATGCAGTGGGAAAATTGTGTTCAAGATATTGAGATTTACTTGCAGCAGTTGTGTTCAAATTCGGATGAAGAAGATTATCATGAGCAGGAAAATGATAGTTCTCAACAAGCTAGTCCAACAGATGCCGTAGTGCTGGAACTAAATGGAAATCCGAATTTGAGCATTGCAGAAAAATTTCAGTCCCTTAAAATTAAAGTAAGAGAAGCTCATGAGAGGTTACAGTTGAAGAAGAAAGAAGTCCAAGCAAGTGTTGATAGGCGTCTCAAAGCTGAATGGGCCATTTGTTTATGCAAACGCCGGGCTGAAGAGTTAGAGATTCAAATAAAGGAAGAGGCCAAGAAGAGAATAGAAATGAAGAAAGAACTAGACAAAGATAAAGATTTTCTCCATGAAGTAAAAACCGATATTGAAGAAAGCAAGAACAAGCTAAACTCACTCATAGAGCTTCGATCAGAGCTTTCGCACAGGCTCCGTATTTCCAAAATGGCAAAAGCACGCATGGAGGCCCAGCTAGAGAATGACATAACAAATCGTGCAGAAATGGTTCGAGAAATCGAAGAGTTGCGACGAGAAAGAGATGTTTTCCAGCGGAGGATTGAATTTTGCAGAGAGAAAGATGCCCTAGGAATGGCAGGAAGGTCGAGTAGTGATCAACTGAGCTGCTGTCTGAGGGAGTACACAGTCGATGAGATAAAATTGGCCACCAATGGCTATTCAGAGAGATTGTTAATTAAAACAGGAAGTGGTAGATTGTTAATTAAAACAGGAAGTGGTAGAAGCACTACTGTTTATAAAGGGCGTATCAACCATGACAGAGTTGCTATCAAACTATTCAACTCGGATGATGGACTGCCCCGAGAAGATTTTCAAGCCAAGGTGAAGCTCATCAGCCACATTAGGCACCCTCATCTGCTTGCCGTGATGGGCTACTGCTCCGAGCTAAACTGCATTGTCTATGAATACATGCACAATGGTAGCCTACAGGATGTCTTATTTTCCTCTCCGGAAAACTCTATAAAGGGATGCCGGGTTCTGACGTGGCACGACCGCATTCGCATTGCAGCCGAGGTTTGCTCTGCCGTGTGCTACATCCACGAGGCTCGGCCCAAGCCCATTATTCATGGGCACCTCAGCCCATCCGACATCCTCCTCGATCACAACCTCGTCGCGAAAGTCGGTGGGTTTGGGCTCGGCCTATGCCACTACGACGAAAGCCATGTTGGATGGGACATACGGGCTTTCGGGGTTTTGACTATGAATCTTCTAATTGGGAGGAATACAGTTGATGAGGCTATGTTTACGGATATGACAGGCCTGGTCCGGGCTTTAGACGAGACTGCTGGGCCTTGGCCATTGGATTTGGCTCAGGAACTTGCGGGCTTGGTATCACTGTGTTTATCCGTAAACGATAGGCCTAATATGGATTTTAAAATGATGACAATAATGGAAGAGCTTGATGTAATCAAGAAAAAGGGTGATGATTTAGTTGCAAGAGGAGGGCCATATGGAGTGGAGATTAGTGGAAGAGTTCATGAAGAAGTCTGCAATGATGTCCCAAGTGTATTCCTCTGCCCCATCTTTCAGGAAGTTATGAAGGATCCACATTTGGCCGCTGATGGATTTTCATACGAGCGGGAAGCCATTGGAGAATGGTTGAGAATGGGACGCGATACATCACCAATGACAAATCTACAACTTACGCACACAACTCTTGTCCCTAATCATGCCCTTCGTTATCTTATTCAAGATTGGCAGTGTAAAAGATCGATTCCATATCCACAGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr U-box

Protein Analysis

823

Amino Acids

93.9

Weight (kDa)

6.35

Isoelectric Point (pI)

43.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	481 - 628	4.5e-21	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	481 - 625	2.3e-12	Protein kinase domain
U-box	PF04564	745 - 816	2.9e-17	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014641)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19540
malus_domestica	MD01G1040600.v1.1 MD15G1311200.v1.1
prunus_persica	Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0111051
rosa_laevigata	RLG00000017861
rosa_multiflora	Rmu_sc0003994.1_g000002
rosa_rugosa	Rorug02G0170700
rosa_samantha	Rh2AG223100 Rh2BG235100 Rh2CG226600 Rh2DG230900
rosa_wichuraiana	Rw2G017220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1473
AccB1I	GGYRCC	2 cut(s)	1581, 1806
AccB7I	CCANNNNNTGG	1 cut(s)	49
AccBSI	CCGCTC	1 cut(s)	2314
AccII	CGCG	2 cut(s)	1850, 2349
AccIII	TCCGGA	1 cut(s)	1684
AciI	CCGC	5 cut(s)	1270, 1729, 2057, 2292, 2314
AclWI	GGATC	4 cut(s)	205, 445, 2273, 2286
AcoI	YGGCCR	3 cut(s)	1380, 2030, 2289
AcsI	RAATTY	6 cut(s)	265, 599, 739, 835, 854, 1280
AcuI	CTGAAG	2 cut(s)	227, 1005
AcyI	GRCGYC	1 cut(s)	940
AfaI	GTAC	2 cut(s)	260, 1358
AfiI	CCNNNNNNNGG	4 cut(s)	49, 168, 1309, 2002
AgsI	TTSAA	9 cut(s)	704, 738, 907, 1001, 1091, 1280, 1516, 1550, 2426
AjiI	CACGTC	1 cut(s)	1719
AjnI	CCWGG	1 cut(s)	1995
AjuI	GAANNNNNNNTTGG	2 cut(s)	1884, 1916
AloI	GAACNNNNNNTCC	2 cut(s)	1695, 1727
Alw26I	GTCTC	2 cut(s)	947, 2009
AlwI	GGATC	4 cut(s)	205, 445, 2273, 2286
AlwNI	CAGNNNCTG	1 cut(s)	49
Ama87I	CYCGRG	1 cut(s)	1536
Aor13HI	TCCGGA	1 cut(s)	1684
ApeKI	GCWGC	5 cut(s)	46, 175, 724, 1341, 1742
ApoI	RAATTY	6 cut(s)	265, 599, 739, 835, 854, 1280
Asp700I	GAANNNNTTC	4 cut(s)	661, 855, 1224, 1545
AspA2I	CCTAGG	1 cut(s)	1303
AspS9I	GGNCC	6 cut(s)	957, 1186, 1785, 1999, 2024, 2180
AsuC2I	CCSGG	3 cut(s)	980, 1709, 2003
AsuHPI	GGTGA	6 cut(s)	298, 391, 630, 1570, 2168, 2349
AsuII	TTCGAA	1 cut(s)	675
AvaI	CYCGRG	1 cut(s)	1536
AvaII	GGWCC	1 cut(s)	1999
AvrII	CCTAGG	1 cut(s)	1303
AxyI	CCTNAGG	1 cut(s)	215
BaeGI	GKGCMC	1 cut(s)	1809
BalI	TGGCCA	2 cut(s)	1382, 2032
BamHI	GGATCC	1 cut(s)	2278
BanI	GGYRCC	2 cut(s)	1581, 1806
BanII	GRGCYC	1 cut(s)	1872
BauI	CACGAG	1 cut(s)	1775
BbvCI	CCTCAGC	1 cut(s)	1811
BbvI	GCAGC	5 cut(s)	33, 162, 736, 1328, 1754
BccI	CCATC	9 cut(s)	47, 376, 459, 1520, 1597, 1825, 1899, 2264, 2291
BceAI	ACGGC	3 cut(s)	791, 1583, 1745
BcgI	CGANNNNNNTGC	2 cut(s)	1302, 1336
BciT130I	CCWGG	1 cut(s)	1997
BclI	TGATCA	3 cut(s)	529, 553, 1330
BcnI	CCSGG	3 cut(s)	980, 1709, 2003
BcoDI	GTCTC	2 cut(s)	947, 2009
BfaI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
BfmI	CTRYAG	1 cut(s)	1661
BglII	AGATCT	1 cut(s)	346
BisI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1743, 2292
BlnI	CCTAGG	1 cut(s)	1303
BlsI	GCNGC	6 cut(s)	48, 177, 726, 1343, 1744, 2293
Bme1390I	CCNGG	4 cut(s)	980, 1709, 1997, 2003
Bme18I	GGWCC	1 cut(s)	1999
BmeT110I	CYCGRG	1 cut(s)	1536
BmgBI	CACGTC	1 cut(s)	1719
BmgT120I	GGNCC	6 cut(s)	957, 1186, 1785, 1999, 2024, 2180
BmiI	GGNNCC	6 cut(s)	41, 562, 1151, 1583, 1808, 2280
BmrFI	CCNGG	4 cut(s)	980, 1709, 1997, 2003
BmsI	GCATC	3 cut(s)	793, 1288, 1694
BplI	GAGNNNNNCTC	2 cut(s)	1739, 1771
Bpu10I	CCTNAGC	2 cut(s)	1811, 2046
Bpu14I	TTCGAA	1 cut(s)	675
BpuEI	CTTGAG	1 cut(s)	245
BpuMI	CCSGG	3 cut(s)	980, 1709, 2003
Bsa29I	ATCGAT	1 cut(s)	2447
BsaBI	GATNNNNATC	1 cut(s)	113
BsaHI	GRCGYC	1 cut(s)	940
BsaJI	CCNNGG	5 cut(s)	564, 1303, 1554, 1746, 2027
BsaWI	WCCGGW	1 cut(s)	1684
BsaXI	ACNNNNNCTCC	2 cut(s)	552, 582
Bsc4I	CCNNNNNNNGG	4 cut(s)	49, 168, 1309, 2002
Bse1I	ACTGG	1 cut(s)	669
Bse21I	CCTNAGG	1 cut(s)	215
Bse3DI	GCAATG	3 cut(s)	843, 1737, 2233
Bse8I	GATNNNNATC	1 cut(s)	113
BseAI	TCCGGA	1 cut(s)	1684
BseBI	CCWGG	1 cut(s)	1997
BseCI	ATCGAT	1 cut(s)	2447
BseDI	CCNNGG	5 cut(s)	564, 1303, 1554, 1746, 2027
BseJI	GATNNNNATC	1 cut(s)	113
BseLI	CCNNNNNNNGG	4 cut(s)	49, 168, 1309, 2002
BseMI	GCAATG	3 cut(s)	843, 1737, 2233
BseMII	CTCAG	6 cut(s)	206, 285, 1328, 1340, 1825, 2060
BseNI	ACTGG	1 cut(s)	669
BseRI	GAGGAG	4 cut(s)	232, 531, 1820, 2190
BseSI	GKGCMC	1 cut(s)	1809
BseXI	GCAGC	5 cut(s)	33, 162, 736, 1328, 1754
BseYI	CCCAGC	2 cut(s)	1188, 2021
BsgI	GTGCAG	1 cut(s)	1236
Bsh1236I	CGCG	2 cut(s)	1850, 2349
Bsh1285I	CGRYCG	1 cut(s)	1729
BshNI	GGYRCC	2 cut(s)	1581, 1806
BshVI	ATCGAT	1 cut(s)	2447
BsiEI	CGRYCG	1 cut(s)	1729
BsiHKCI	CYCGRG	1 cut(s)	1536
BsiSI	CCGG	5 cut(s)	464, 979, 1685, 1708, 2002
BslFI	GGGAC	6 cut(s)	372, 847, 1922, 2219, 2358, 2381
BslI	CCNNNNNNNGG	4 cut(s)	49, 168, 1309, 2002
BsmAI	GTCTC	2 cut(s)	947, 2009
BsmBI	CGTCTC	1 cut(s)	947
BsmFI	GGGAC	6 cut(s)	372, 847, 1922, 2219, 2358, 2381
BsmI	GAATGC	1 cut(s)	1731
BsoBI	CYCGRG	1 cut(s)	1536
Bsp119I	TTCGAA	1 cut(s)	675
Bsp1286I	GDGCHC	2 cut(s)	1809, 1872
Bsp13I	TCCGGA	1 cut(s)	1684
Bsp1407I	TGTACA	1 cut(s)	258
Bsp19I	CCATGG	1 cut(s)	564
Bsp68I	TCGCGA	1 cut(s)	1850
BspACI	CCGC	5 cut(s)	1270, 1729, 2057, 2292, 2314
BspCNI	CTCAG	6 cut(s)	207, 286, 1329, 1341, 1824, 2059
BspDI	ATCGAT	1 cut(s)	2447
BspEI	TCCGGA	1 cut(s)	1684
BspFNI	CGCG	2 cut(s)	1850, 2349
BspHI	TCATGA	4 cut(s)	396, 760, 889, 2212
BspLI	GGNNCC	6 cut(s)	41, 562, 1151, 1583, 1808, 2280
BspPI	GGATC	4 cut(s)	205, 445, 2273, 2286
BspQI	GCTCTTC	1 cut(s)	2124
BspT104I	TTCGAA	1 cut(s)	675
BspT107I	GGYRCC	2 cut(s)	1581, 1806
BsrBI	CCGCTC	1 cut(s)	2314
BsrDI	GCAATG	3 cut(s)	843, 1737, 2233
BsrGI	TGTACA	1 cut(s)	258
BsrI	ACTGG	1 cut(s)	669
BssECI	CCNNGG	5 cut(s)	564, 1303, 1554, 1746, 2027
BssNI	GRCGYC	1 cut(s)	940
BssSI	CACGAG	1 cut(s)	1775
BssT1I	CCWWGG	4 cut(s)	564, 1303, 1554, 2027
Bst2BI	CACGAG	1 cut(s)	1775
Bst2UI	CCWGG	1 cut(s)	1997
Bst4CI	ACNGT	7 cut(s)	134, 427, 903, 1363, 1468, 1963, 2073
Bst6I	CTCTTC	7 cut(s)	9, 981, 1005, 1016, 1233, 2124, 2200
BstACI	GRCGYC	1 cut(s)	940
BstAUI	TGTACA	1 cut(s)	258
BstBI	TTCGAA	1 cut(s)	675
BstC8I	GCNNGC	4 cut(s)	180, 1177, 1596, 2059
BstDEI	CTNAG	7 cut(s)	215, 294, 512, 1337, 1349, 1811, 2046
BstDSI	CCRYGG	1 cut(s)	564
BstFNI	CGCG	2 cut(s)	1850, 2349
BstMAI	GTCTC	2 cut(s)	947, 2009
BstMCI	CGRYCG	1 cut(s)	1729
BstMWI	GCNNNNNNNGC	2 cut(s)	569, 956
BstNI	CCWGG	1 cut(s)	1997
BstNSI	RCATGY	1 cut(s)	1648
BstSCI	CCNGG	4 cut(s)	978, 1707, 1995, 2001
BstSFI	CTRYAG	1 cut(s)	1661
BstSLI	GKGCMC	1 cut(s)	1809
BstUI	CGCG	2 cut(s)	1850, 2349
BstV1I	GCAGC	5 cut(s)	33, 162, 736, 1328, 1754
BstX2I	RGATCY	3 cut(s)	210, 346, 2278
BstYI	RGATCY	3 cut(s)	210, 346, 2278
Bsu15I	ATCGAT	1 cut(s)	2447
Bsu36I	CCTNAGG	1 cut(s)	215
BsuTUI	ATCGAT	1 cut(s)	2447
BtgI	CCRYGG	1 cut(s)	564
BtrI	CACGTC	1 cut(s)	1719
BtsI	GCAGTG	2 cut(s)	692, 2441
BtsIMutI	CAGTG	5 cut(s)	139, 439, 692, 2069, 2441
BtuMI	TCGCGA	1 cut(s)	1850
Cac8I	GCNNGC	4 cut(s)	180, 1177, 1596, 2059
CaiI	CAGNNNCTG	1 cut(s)	49
CciI	TCATGA	4 cut(s)	396, 760, 889, 2212
Cfr13I	GGNCC	6 cut(s)	957, 1186, 1785, 1999, 2024, 2180
ClaI	ATCGAT	1 cut(s)	2447
CseI	GACGC	2 cut(s)	929, 2355
Csp6I	GTAC	2 cut(s)	259, 1357
CspCI	CAANNNNNGTGG	2 cut(s)	148, 183
CviQI	GTAC	2 cut(s)	259, 1357
DdeI	CTNAG	7 cut(s)	215, 294, 512, 1337, 1349, 1811, 2046
DraI	TTTAAA	1 cut(s)	2110
EaeI	YGGCCR	3 cut(s)	1380, 2030, 2289
Eam1104I	CTCTTC	7 cut(s)	9, 981, 1005, 1016, 1233, 2124, 2200
EarI	CTCTTC	7 cut(s)	9, 981, 1005, 1016, 1233, 2124, 2200
Eco130I	CCWWGG	4 cut(s)	564, 1303, 1554, 2027
Eco147I	AGGCCT	2 cut(s)	1995, 2095
Eco24I	GRGCYC	1 cut(s)	1872
Eco47I	GGWCC	1 cut(s)	1999
Eco57I	CTGAAG	2 cut(s)	227, 1005
Eco81I	CCTNAGG	1 cut(s)	215
Eco88I	CYCGRG	1 cut(s)	1536
EcoRII	CCWGG	1 cut(s)	1995
EcoT14I	CCWWGG	4 cut(s)	564, 1303, 1554, 2027
EcoT38I	GRGCYC	1 cut(s)	1872
ErhI	CCWWGG	4 cut(s)	564, 1303, 1554, 2027
Esp3I	CGTCTC	1 cut(s)	947
FaqI	GGGAC	6 cut(s)	372, 847, 1922, 2219, 2358, 2381
FauI	CCCGC	2 cut(s)	2050, 2307
FauNDI	CATATG	2 cut(s)	333, 2185
FbaI	TGATCA	3 cut(s)	529, 553, 1330
Fnu4HI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1743, 2292
FriOI	GRGCYC	1 cut(s)	1872
Fsp4HI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1743, 2292
FspBI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
GluI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1743, 2292
GsaI	CCCAGC	2 cut(s)	1192, 2025
HapII	CCGG	5 cut(s)	464, 979, 1685, 1708, 2002
HgaI	GACGC	2 cut(s)	929, 2355
Hin1I	GRCGYC	1 cut(s)	940
HinfI	GANTC	5 cut(s)	57, 467, 997, 1939, 2449
HpaII	CCGG	5 cut(s)	464, 979, 1685, 1708, 2002
HphI	GGTGA	6 cut(s)	298, 391, 630, 1570, 2168, 2349
Hpy166II	GTNNAC	5 cut(s)	25, 75, 1359, 1980, 2086
Hpy8I	GTNNAC	5 cut(s)	25, 75, 1359, 1980, 2086
Hpy99I	CGWCG	3 cut(s)	1251, 1850, 1892
HpyAV	CCTTC	6 cut(s)	13, 128, 283, 1311, 2269, 2420
HpyCH4III	ACNGT	7 cut(s)	134, 427, 903, 1363, 1468, 1963, 2073
HpyCH4IV	ACGT	3 cut(s)	27, 306, 1718
HpyF10VI	GCNNNNNNNGC	2 cut(s)	569, 956
HpyF3I	CTNAG	7 cut(s)	215, 294, 512, 1337, 1349, 1811, 2046
HpySE526I	ACGT	3 cut(s)	27, 306, 1718
Hsp92I	GRCGYC	1 cut(s)	940
Kpn2I	TCCGGA	1 cut(s)	1684
Ksp22I	TGATCA	3 cut(s)	529, 553, 1330
LguI	GCTCTTC	1 cut(s)	2124
LmnI	GCTCC	3 cut(s)	560, 1155, 1619
Lsp1109I	GCAGC	5 cut(s)	33, 162, 736, 1328, 1754
LweI	GCATC	3 cut(s)	793, 1288, 1694
MaeI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
MaeII	ACGT	3 cut(s)	27, 306, 1718
MaeIII	GTNAC	2 cut(s)	124, 897
MbiI	CCGCTC	1 cut(s)	2314
MflI	RGATCY	3 cut(s)	210, 346, 2278
MhlI	GDGCHC	2 cut(s)	1809, 1872
MlsI	TGGCCA	2 cut(s)	1382, 2032
MluNI	TGGCCA	2 cut(s)	1382, 2032
MmeI	TCCRAC	3 cut(s)	821, 1845, 1882
Mox20I	TGGCCA	2 cut(s)	1382, 2032
MroI	TCCGGA	1 cut(s)	1684
MroXI	GAANNNNTTC	4 cut(s)	661, 855, 1224, 1545
MscI	TGGCCA	2 cut(s)	1382, 2032
MseI	TTAA	7 cut(s)	867, 873, 1409, 1413, 1436, 1440, 2109
MslI	CAYNNNNRTG	1 cut(s)	409
Msp20I	TGGCCA	2 cut(s)	1382, 2032
MspA1I	CMGCKG	3 cut(s)	46, 1270, 2294
MspI	CCGG	5 cut(s)	464, 979, 1685, 1708, 2002
MspR9I	CCNGG	4 cut(s)	980, 1709, 1997, 2003
Mva1269I	GAATGC	1 cut(s)	1731
MvaI	CCWGG	1 cut(s)	1997
MvnI	CGCG	2 cut(s)	1850, 2349
MwoI	GCNNNNNNNGC	2 cut(s)	569, 956
NciI	CCSGG	3 cut(s)	980, 1709, 2003
NcoI	CCATGG	1 cut(s)	564
NdeI	CATATG	2 cut(s)	333, 2185
NlaIV	GGNNCC	6 cut(s)	41, 562, 1151, 1583, 1808, 2280
NmeAIII	GCCGAG	3 cut(s)	1762, 1771, 1851
NruI	TCGCGA	1 cut(s)	1850
NspI	RCATGY	1 cut(s)	1648
NspV	TTCGAA	1 cut(s)	675
PacI	TTAATTAA	2 cut(s)	1413, 1440
PagI	TCATGA	4 cut(s)	396, 760, 889, 2212
PceI	AGGCCT	2 cut(s)	1995, 2095
PciSI	GCTCTTC	1 cut(s)	2124
PctI	GAATGC	1 cut(s)	1731
PdmI	GAANNNNTTC	4 cut(s)	661, 855, 1224, 1545
PfeI	GAWTC	5 cut(s)	57, 467, 997, 1939, 2449
PflFI	GACNNNGTC	1 cut(s)	587
PflMI	CCANNNNNTGG	1 cut(s)	49
PkrI	GCNGC	6 cut(s)	48, 177, 726, 1343, 1744, 2293
PsiI	TTATAA	1 cut(s)	1473
Psp6I	CCWGG	1 cut(s)	1995
PspFI	CCCAGC	2 cut(s)	1188, 2021
PspGI	CCWGG	1 cut(s)	1995
PspN4I	GGNNCC	6 cut(s)	41, 562, 1151, 1583, 1808, 2280
PspPI	GGNCC	6 cut(s)	957, 1186, 1785, 1999, 2024, 2180
PstNI	CAGNNNCTG	1 cut(s)	49
PsuI	RGATCY	3 cut(s)	210, 346, 2278
PsyI	GACNNNGTC	1 cut(s)	587
PvuII	CAGCTG	1 cut(s)	46
RruI	TCGCGA	1 cut(s)	1850
RsaI	GTAC	2 cut(s)	260, 1358
RsaNI	GTAC	2 cut(s)	259, 1357
RseI	CAYNNNNRTG	1 cut(s)	409
SapI	GCTCTTC	1 cut(s)	2124
SaqAI	TTAA	7 cut(s)	867, 873, 1409, 1413, 1436, 1440, 2109
SatI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1743, 2292
Sau96I	GGNCC	6 cut(s)	957, 1186, 1785, 1999, 2024, 2180
ScrFI	CCNGG	4 cut(s)	980, 1709, 1997, 2003
SduI	GDGCHC	2 cut(s)	1809, 1872
SfaNI	GCATC	3 cut(s)	793, 1288, 1694
SfcI	CTRYAG	1 cut(s)	1661
SfuI	TTCGAA	1 cut(s)	675
SinI	GGWCC	1 cut(s)	1999
SmiMI	CAYNNNNRTG	1 cut(s)	409
SmlI	CTYRAG	1 cut(s)	224
SmoI	CTYRAG	1 cut(s)	224
SseBI	AGGCCT	2 cut(s)	1995, 2095
SsiI	CCGC	5 cut(s)	1270, 1729, 2057, 2292, 2314
SspMI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
StuI	AGGCCT	2 cut(s)	1995, 2095
StyD4I	CCNGG	4 cut(s)	978, 1707, 1995, 2001
StyI	CCWWGG	4 cut(s)	564, 1303, 1554, 2027
TaaI	ACNGT	7 cut(s)	134, 427, 903, 1363, 1468, 1963, 2073
TaiI	ACGT	3 cut(s)	30, 309, 1721
TaqI	TCGA	9 cut(s)	107, 675, 1129, 1228, 1236, 1322, 1365, 1833, 2447
TatI	WGTACW	2 cut(s)	258, 1356
TauI	GCSGC	1 cut(s)	2294
TfiI	GAWTC	5 cut(s)	57, 467, 997, 1939, 2449
Tru1I	TTAA	7 cut(s)	867, 873, 1409, 1413, 1436, 1440, 2109
Tru9I	TTAA	7 cut(s)	867, 873, 1409, 1413, 1436, 1440, 2109
TscAI	CASTG	5 cut(s)	139, 439, 692, 2076, 2441
TseI	GCWGC	5 cut(s)	46, 175, 724, 1341, 1742
TspGWI	ACGGA	3 cut(s)	1142, 1997, 2071
TspRI	CASTG	5 cut(s)	139, 439, 692, 2076, 2441
Tth111I	GACNNNGTC	1 cut(s)	587
Van91I	CCANNNNNTGG	1 cut(s)	49
VpaK11BI	GGWCC	1 cut(s)	1999
XapI	RAATTY	6 cut(s)	265, 599, 739, 835, 854, 1280
XceI	RCATGY	1 cut(s)	1648
XcmI	CCANNNNNNNNNTGG	2 cut(s)	50, 379
XmaJI	CCTAGG	1 cut(s)	1303
XmnI	GAANNNNTTC	4 cut(s)	661, 855, 1224, 1545
XspI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.