Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0014641

Physical Location & Seq

Genomic Coordinates Forward (+)

23607054 .. 23611810

Gene Structure 4757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG223100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGAAGGTCAAGAAGAGAAGGTTTACGTTGCACTTGGGAACCAGCTGCCAGATGGAATCAAGACTTTGGAGTGGACTTTGAGGAGGTGGAGATTTCAGCCGATTTCGATTGTTATCCTTCATGTAACCAACAGTGTTTCTGCCAAAGATTATGTTTCCACCCCATATGGGAAGCTGCCTGCAAGTTATGTGAGTGATGAGAAAGTGAAGATTCTGAGGAGGCTTGATCAAGACAAAATTGACAAAATCCTTTCCAAGTACATAAATTTCTGTCGCAAGGCTAGGGTGAAGGCTGAGATACTCAACGTGGAGAGATATGATGACCCTATTCATATGCAAATCCTAGATCTGATTTCGGGACTTCATATAACCAAATTGGTGATGGGATTTTTGTTCATGAAATCATCTTCATGGAAACCAAAAACCGTAATCAGTGGATCATTTCACATCCATCAGCACAAGCCGGAATCTTGTGAATTCTTCATAATATGTGGTGGAAAGGAGGTATTTCTAAGAGGAGAAAATAATGATCAAAGAATATCAATGGAAGATGATCAAGGAGCCATGGTTGCAACAATGAAAGACAGGGTCAGTATCAAATTTATCATAGGAAGTATGTTCGGAAGTCGTCAAAGCTCATCTGTTTCATCAACAAGAAATCATTCATCCAGCTTGGAAAATATGCAGTGGGAAAATTGTGTTCAAGAAATTGAGATTTACTTGCAGCAGTTGTGTTCAAATTCGGATGAAGAAGATTATCATGAACAGGAAAGTGATACTACTCAACAAGCTAGTCCAACAGATGCCATAGTGCTGGAACTTAATGGAAATCCGAATTTGAACATTGCAGAAAAATTTGAGTCCCTTAAAATTAAAGTAAGAGAAGCTCATGAGAGGTTACAGTCGAAGAAGAAAGAAGTCCAAGCAAGTGTTGATAGGCGTCTCAAAGCTGAATGGGCCATTTGTTTATGCAAACGCCGGGCTGAAGAGTTAGAGATTCAAATAAAGGAAGAGGCCAAGAAGAGAATAGAAATGAAGAAATTACTAGACAAAGATAAAGATTTCCTCCATGAAGTAAAAACCGATATTGAAGAAAGCAAGAACAAGCTAAACTCACTCATAGAGCTTCGATCAGAGCTTTCACAGAGGCTCCGTATTTCCAAAATGGCAAGAGCACGCATGGAGGCCCAGCTAGAGAATGACATAACAAATCGTGCAGAAATGGTTCGAGAAATCGAAGAGTTGCGACGAGAAAGAGACGTTTTCCAGCGGAGGATTGAATTTTGCAGAGAGAAAGATGCCCTAGGAATGGCAGGAAGGTCGAGTAGTGATCAACTGAGCTGCTGTCTGAGGGAGTACACAGTCGAAGAGATAAAATTGGCCACCAATGGCTATTCAGAGAGATTGTTATTTAAAACAGGAAGTGATAGAAGCCCTACTGTTTATAAAGGGCGTATCAACCATGACAGAGTTGCTATCAAACTATTCAACTCGGATGATGGACTGCCCCGAGAAGATTTTCAAGCCAAGGTGAAGCTCATCAGCCACATTAGGCACCCTCATCTGCTTGCCATGATGGGCTACTGCTCCGAGCTAAACTGCATTGTCTATGAATACATGCACAATGGTAGCCTACAGGATGTCTTATTTTCCTCACCGGAAAACTCTATAAAGGGATGCCGGGTTCTGACATGGCACGACCGCATTCGCATTGCAGCTGAGGTTTGCTCCGCCGTGTGCTACATCCACGAGGCTCGGCCCAAGCCCATTATTCATGGGCACCTCAGCCCATCCAACATCCTCCTCGATGGCAACCTCGTTGCGAAAGTCGGTGGGTTTGGGCTCGGCCACTACGACCAAAGCCATGTTGGATGGGACGTACGGGCTTTCGGGGTTTTGACTATGAATCTTCTAATTGGGAGGAATACAGTTGATGAGGCTATGTTTACGGATATGACAGGCCTGGTCCGGGCTTTAGACGAGACTGCTGGGCCTTGGCCATTGGATTTGGCTCAGGAACTTGCGGGCTTGGTATCACTGTGTTTATCCGTAAACGATAGGCCTAATATGGATTGTCATCATTTAATGATGACAATAATGGAAGAGCTTGATGTAATCAAGAAAAAGGCTGATGATGATTTTGTTGCAAGAGGAGGGTCATATGGAGTGAATATTGGTGGAAGAGTTCATGAAGAAGTCTGCAATGATGTCCCAAGTGTTTTCCTCTGCCCCATCTTTCAGGAAGTTATGCAGGATCCACATGTGGCCGCTGATGGATTTTCATACGAGCGGGAAGCCATTGGAGAATGGTTGCGAATGGGACGCGATACATCACCAATGACAAATCTACAACTTACGCACACAACTCTTGTCCCTAATCGTACCCTTCGTTCTCTTATTCAAGAGTGGCATTGTAAAAGATCGATTCCATATCCACAGCAGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase_Tyr U-box

Protein Analysis

815

Amino Acids

93.36

Weight (kDa)

6.29

Isoelectric Point (pI)

47.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	478 - 617	6.6e-12	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	479 - 617	4.9e-20	Protein tyrosine and serine/threonine kinase
U-box	PF04564	737 - 808	2.6e-18	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014641)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g19540
malus_domestica	MD01G1040600.v1.1 MD15G1311200.v1.1
prunus_persica	Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1 Prupe.6G202800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0111051
rosa_laevigata	RLG00000017861
rosa_multiflora	Rmu_sc0003994.1_g000002
rosa_rugosa	Rorug02G0170700
rosa_samantha	Rh2AG223100 Rh2BG235100 Rh2CG226600 Rh2DG230900
rosa_wichuraiana	Rw2G017220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1446
AccB1I	GGYRCC	2 cut(s)	1554, 1779
AccBSI	CCGCTC	1 cut(s)	2290
AccII	CGCG	1 cut(s)	2325
AciI	CCGC	6 cut(s)	1270, 1702, 1731, 2024, 2268, 2290
AclWI	GGATC	3 cut(s)	445, 2249, 2262
AcoI	YGGCCR	4 cut(s)	1380, 1846, 1997, 2265
AcsI	RAATTY	7 cut(s)	265, 476, 599, 739, 835, 854, 1280
AcuI	CTGAAG	1 cut(s)	1005
AcyI	GRCGYC	1 cut(s)	940
AfaI	GTAC	5 cut(s)	260, 1358, 1881, 2383, 2444
AfiI	CCNNNNNNNGG	3 cut(s)	168, 1309, 1969
AflIII	ACRYGT	1 cut(s)	2260
AgsI	TTSAA	9 cut(s)	704, 738, 841, 1001, 1091, 1280, 1489, 1523, 2402
AjnI	CCWGG	1 cut(s)	1962
AloI	GAACNNNNNNTCC	2 cut(s)	1668, 1700
Alw21I	GWGCWC	1 cut(s)	1177
Alw26I	GTCTC	3 cut(s)	947, 1251, 1976
AlwI	GGATC	3 cut(s)	445, 2249, 2262
Ama87I	CYCGRG	1 cut(s)	1509
ApeKI	GCWGC	5 cut(s)	46, 175, 724, 1341, 1715
ApoI	RAATTY	7 cut(s)	265, 476, 599, 739, 835, 854, 1280
Asp700I	GAANNNNTTC	3 cut(s)	661, 1224, 1518
AspA2I	CCTAGG	1 cut(s)	1303
AspS9I	GGNCC	5 cut(s)	957, 1186, 1758, 1966, 1991
AsuC2I	CCSGG	3 cut(s)	980, 1682, 1970
AsuHPI	GGTGA	5 cut(s)	298, 391, 1543, 1647, 2325
AvaI	CYCGRG	1 cut(s)	1509
AvaII	GGWCC	1 cut(s)	1966
AvrII	CCTAGG	1 cut(s)	1303
BaeGI	GKGCMC	1 cut(s)	1782
BalI	TGGCCA	2 cut(s)	1382, 1999
BamHI	GGATCC	1 cut(s)	2254
BanI	GGYRCC	2 cut(s)	1554, 1779
BanII	GRGCYC	1 cut(s)	1845
BauI	CACGAG	1 cut(s)	1748
Bbv12I	GWGCWC	1 cut(s)	1177
BbvCI	CCTCAGC	2 cut(s)	1719, 1784
BbvI	GCAGC	5 cut(s)	33, 162, 736, 1328, 1727
BceAI	ACGGC	1 cut(s)	1718
BcgI	CGANNNNNNTGC	2 cut(s)	1302, 1336
BciT130I	CCWGG	1 cut(s)	1964
BclI	TGATCA	4 cut(s)	226, 529, 553, 1330
BcnI	CCSGG	3 cut(s)	980, 1682, 1970
BcoDI	GTCTC	3 cut(s)	947, 1251, 1976
BfaI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
BfmI	CTRYAG	1 cut(s)	1634
BglII	AGATCT	1 cut(s)	346
BisI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1716, 2268
BlnI	CCTAGG	1 cut(s)	1303
BlsI	GCNGC	6 cut(s)	48, 177, 726, 1343, 1717, 2269
BmcAI	AGTACT	1 cut(s)	2444
Bme1390I	CCNGG	4 cut(s)	980, 1682, 1964, 1970
Bme18I	GGWCC	1 cut(s)	1966
BmeT110I	CYCGRG	1 cut(s)	1509
BmgT120I	GGNCC	5 cut(s)	957, 1186, 1758, 1966, 1991
BmiI	GGNNCC	6 cut(s)	41, 562, 1151, 1556, 1781, 2256
BmrFI	CCNGG	4 cut(s)	980, 1682, 1964, 1970
BmsI	GCATC	3 cut(s)	793, 1288, 1667
BplI	GAGNNNNNCTC	2 cut(s)	1712, 1744
Bpu10I	CCTNAGC	3 cut(s)	1719, 1784, 2013
BpuMI	CCSGG	3 cut(s)	980, 1682, 1970
Bsa29I	ATCGAT	1 cut(s)	2423
BsaBI	GATNNNNATC	2 cut(s)	113, 2076
BsaHI	GRCGYC	1 cut(s)	940
BsaJI	CCNNGG	4 cut(s)	564, 1303, 1527, 1994
BsaWI	WCCGGW	1 cut(s)	1657
BsaXI	ACNNNNNCTCC	4 cut(s)	552, 582, 1134, 1164
Bsc4I	CCNNNNNNNGG	3 cut(s)	168, 1309, 1969
Bse3DI	GCAATG	3 cut(s)	843, 1710, 2209
Bse8I	GATNNNNATC	2 cut(s)	113, 2076
BseBI	CCWGG	1 cut(s)	1964
BseCI	ATCGAT	1 cut(s)	2423
BseDI	CCNNGG	4 cut(s)	564, 1303, 1527, 1994
BseJI	GATNNNNATC	2 cut(s)	113, 2076
BseLI	CCNNNNNNNGG	3 cut(s)	168, 1309, 1969
BseMI	GCAATG	3 cut(s)	843, 1710, 2209
BseMII	CTCAG	7 cut(s)	206, 285, 1328, 1340, 1710, 1798, 2027
BseRI	GAGGAG	5 cut(s)	97, 232, 531, 1793, 2166
BseSI	GKGCMC	1 cut(s)	1782
BseXI	GCAGC	5 cut(s)	33, 162, 736, 1328, 1727
BseYI	CCCAGC	2 cut(s)	1188, 1988
BsgI	GTGCAG	1 cut(s)	1236
Bsh1236I	CGCG	1 cut(s)	2325
Bsh1285I	CGRYCG	1 cut(s)	1702
BshNI	GGYRCC	2 cut(s)	1554, 1779
BshVI	ATCGAT	1 cut(s)	2423
BsiEI	CGRYCG	1 cut(s)	1702
BsiHKAI	GWGCWC	1 cut(s)	1177
BsiHKCI	CYCGRG	1 cut(s)	1509
BsiSI	CCGG	5 cut(s)	464, 979, 1658, 1681, 1969
BsiWI	CGTACG	1 cut(s)	1879
BslFI	GGGAC	6 cut(s)	372, 847, 1889, 2195, 2334, 2357
BslI	CCNNNNNNNGG	3 cut(s)	168, 1309, 1969
BsmAI	GTCTC	3 cut(s)	947, 1251, 1976
BsmBI	CGTCTC	2 cut(s)	947, 1251
BsmFI	GGGAC	6 cut(s)	372, 847, 1889, 2195, 2334, 2357
BsmI	GAATGC	1 cut(s)	1704
BsoBI	CYCGRG	1 cut(s)	1509
Bsp1286I	GDGCHC	3 cut(s)	1177, 1782, 1845
Bsp143I	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
Bsp19I	CCATGG	1 cut(s)	564
BspACI	CCGC	6 cut(s)	1270, 1702, 1731, 2024, 2268, 2290
BspCNI	CTCAG	7 cut(s)	207, 286, 1329, 1341, 1711, 1797, 2026
BspDI	ATCGAT	1 cut(s)	2423
BspFNI	CGCG	1 cut(s)	2325
BspHI	TCATGA	4 cut(s)	396, 760, 889, 2188
BspLI	GGNNCC	6 cut(s)	41, 562, 1151, 1556, 1781, 2256
BspPI	GGATC	3 cut(s)	445, 2249, 2262
BspQI	GCTCTTC	1 cut(s)	2097
BspT107I	GGYRCC	2 cut(s)	1554, 1779
BsrBI	CCGCTC	1 cut(s)	2290
BsrDI	GCAATG	3 cut(s)	843, 1710, 2209
BssECI	CCNNGG	4 cut(s)	564, 1303, 1527, 1994
BssMI	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
BssNI	GRCGYC	1 cut(s)	940
BssSI	CACGAG	1 cut(s)	1748
BssT1I	CCWWGG	4 cut(s)	564, 1303, 1527, 1994
Bst2BI	CACGAG	1 cut(s)	1748
Bst2UI	CCWGG	1 cut(s)	1964
Bst4CI	ACNGT	7 cut(s)	134, 427, 903, 1363, 1441, 1930, 2040
Bst6I	CTCTTC	8 cut(s)	9, 981, 1005, 1016, 1233, 1362, 2097, 2176
BstACI	GRCGYC	1 cut(s)	940
BstC8I	GCNNGC	4 cut(s)	180, 1177, 1569, 2026
BstDEI	CTNAG	8 cut(s)	215, 294, 512, 1337, 1349, 1719, 1784, 2013
BstDSI	CCRYGG	1 cut(s)	564
BstFNI	CGCG	1 cut(s)	2325
BstKTI	GATC	9 cut(s)	229, 349, 440, 532, 556, 1133, 1333, 2257, 2423
BstMAI	GTCTC	3 cut(s)	947, 1251, 1976
BstMBI	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
BstMCI	CGRYCG	1 cut(s)	1702
BstMWI	GCNNNNNNNGC	2 cut(s)	569, 956
BstNI	CCWGG	1 cut(s)	1964
BstNSI	RCATGY	2 cut(s)	1621, 2264
BstSCI	CCNGG	4 cut(s)	978, 1680, 1962, 1968
BstSFI	CTRYAG	1 cut(s)	1634
BstSLI	GKGCMC	1 cut(s)	1782
BstUI	CGCG	1 cut(s)	2325
BstV1I	GCAGC	5 cut(s)	33, 162, 736, 1328, 1727
BstX2I	RGATCY	2 cut(s)	346, 2254
BstXI	CCANNNNNNTGG	1 cut(s)	814
BstYI	RGATCY	2 cut(s)	346, 2254
Bsu15I	ATCGAT	1 cut(s)	2423
BsuTUI	ATCGAT	1 cut(s)	2423
BtgI	CCRYGG	1 cut(s)	564
BtsI	GCAGTG	1 cut(s)	692
BtsIMutI	CAGTG	4 cut(s)	139, 439, 692, 2036
Cac8I	GCNNGC	4 cut(s)	180, 1177, 1569, 2026
CciI	TCATGA	4 cut(s)	396, 760, 889, 2188
Cfr13I	GGNCC	5 cut(s)	957, 1186, 1758, 1966, 1991
ClaI	ATCGAT	1 cut(s)	2423
CseI	GACGC	2 cut(s)	929, 2331
Csp6I	GTAC	5 cut(s)	259, 1357, 1880, 2382, 2443
CviQI	GTAC	5 cut(s)	259, 1357, 1880, 2382, 2443
DdeI	CTNAG	8 cut(s)	215, 294, 512, 1337, 1349, 1719, 1784, 2013
DpnI	GATC	9 cut(s)	228, 348, 439, 531, 555, 1132, 1332, 2256, 2422
DpnII	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
DraI	TTTAAA	1 cut(s)	1414
EaeI	YGGCCR	4 cut(s)	1380, 1846, 1997, 2265
Eam1104I	CTCTTC	8 cut(s)	9, 981, 1005, 1016, 1233, 1362, 2097, 2176
EarI	CTCTTC	8 cut(s)	9, 981, 1005, 1016, 1233, 1362, 2097, 2176
EciI	GGCGGA	1 cut(s)	1720
Eco130I	CCWWGG	4 cut(s)	564, 1303, 1527, 1994
Eco147I	AGGCCT	2 cut(s)	1962, 2062
Eco24I	GRGCYC	1 cut(s)	1845
Eco47I	GGWCC	1 cut(s)	1966
Eco57I	CTGAAG	1 cut(s)	1005
Eco88I	CYCGRG	1 cut(s)	1509
EcoRI	GAATTC	1 cut(s)	476
EcoRII	CCWGG	1 cut(s)	1962
EcoT14I	CCWWGG	4 cut(s)	564, 1303, 1527, 1994
EcoT38I	GRGCYC	1 cut(s)	1845
ErhI	CCWWGG	4 cut(s)	564, 1303, 1527, 1994
Esp3I	CGTCTC	2 cut(s)	947, 1251
FaqI	GGGAC	6 cut(s)	372, 847, 1889, 2195, 2334, 2357
FauI	CCCGC	2 cut(s)	2017, 2283
FauNDI	CATATG	3 cut(s)	166, 333, 2161
FbaI	TGATCA	4 cut(s)	226, 529, 553, 1330
Fnu4HI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1716, 2268
FriOI	GRGCYC	1 cut(s)	1845
Fsp4HI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1716, 2268
FspBI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
GluI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1716, 2268
GsaI	CCCAGC	2 cut(s)	1192, 1992
HapII	CCGG	5 cut(s)	464, 979, 1658, 1681, 1969
HgaI	GACGC	2 cut(s)	929, 2331
Hin1I	GRCGYC	1 cut(s)	940
HinfI	GANTC	7 cut(s)	57, 211, 467, 860, 997, 1906, 2425
HpaII	CCGG	5 cut(s)	464, 979, 1658, 1681, 1969
HphI	GGTGA	5 cut(s)	298, 391, 1543, 1647, 2325
Hpy166II	GTNNAC	5 cut(s)	25, 75, 1359, 1947, 2053
Hpy8I	GTNNAC	5 cut(s)	25, 75, 1359, 1947, 2053
Hpy99I	CGWCG	1 cut(s)	1251
HpyAV	CCTTC	5 cut(s)	13, 128, 283, 1311, 2396
HpyCH4III	ACNGT	7 cut(s)	134, 427, 903, 1363, 1441, 1930, 2040
HpyCH4IV	ACGT	4 cut(s)	27, 306, 1260, 1878
HpyF10VI	GCNNNNNNNGC	2 cut(s)	569, 956
HpyF3I	CTNAG	8 cut(s)	215, 294, 512, 1337, 1349, 1719, 1784, 2013
HpySE526I	ACGT	4 cut(s)	27, 306, 1260, 1878
Hsp92I	GRCGYC	1 cut(s)	940
Ksp22I	TGATCA	4 cut(s)	226, 529, 553, 1330
Kzo9I	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
LguI	GCTCTTC	1 cut(s)	2097
LmnI	GCTCC	4 cut(s)	560, 1155, 1592, 1733
Lsp1109I	GCAGC	5 cut(s)	33, 162, 736, 1328, 1727
LweI	GCATC	3 cut(s)	793, 1288, 1667
MaeI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
MaeII	ACGT	4 cut(s)	27, 306, 1260, 1878
MaeIII	GTNAC	2 cut(s)	124, 897
MalI	GATC	9 cut(s)	228, 348, 439, 531, 555, 1132, 1332, 2256, 2422
MbiI	CCGCTC	1 cut(s)	2290
MboI	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
MflI	RGATCY	2 cut(s)	346, 2254
MhlI	GDGCHC	3 cut(s)	1177, 1782, 1845
MlsI	TGGCCA	2 cut(s)	1382, 1999
MluNI	TGGCCA	2 cut(s)	1382, 1999
MlyI	GAGTC	1 cut(s)	869
MmeI	TCCRAC	3 cut(s)	821, 1818, 1849
Mox20I	TGGCCA	2 cut(s)	1382, 1999
MroXI	GAANNNNTTC	3 cut(s)	661, 1224, 1518
MscI	TGGCCA	2 cut(s)	1382, 1999
MseI	TTAA	5 cut(s)	822, 867, 873, 1413, 2084
MslI	CAYNNNNRTG	1 cut(s)	409
Msp20I	TGGCCA	2 cut(s)	1382, 1999
MspA1I	CMGCKG	4 cut(s)	46, 1270, 1718, 2270
MspI	CCGG	5 cut(s)	464, 979, 1658, 1681, 1969
MspR9I	CCNGG	4 cut(s)	980, 1682, 1964, 1970
Mva1269I	GAATGC	1 cut(s)	1704
MvaI	CCWGG	1 cut(s)	1964
MvnI	CGCG	1 cut(s)	2325
MwoI	GCNNNNNNNGC	2 cut(s)	569, 956
NciI	CCSGG	3 cut(s)	980, 1682, 1970
NcoI	CCATGG	1 cut(s)	564
NdeI	CATATG	3 cut(s)	166, 333, 2161
NdeII	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
NlaIV	GGNNCC	6 cut(s)	41, 562, 1151, 1556, 1781, 2256
NmeAIII	GCCGAG	2 cut(s)	1735, 1824
NspI	RCATGY	2 cut(s)	1621, 2264
PagI	TCATGA	4 cut(s)	396, 760, 889, 2188
PceI	AGGCCT	2 cut(s)	1962, 2062
PciI	ACATGT	1 cut(s)	2260
PciSI	GCTCTTC	1 cut(s)	2097
PcsI	WCGNNNNNNNCGW	2 cut(s)	1851, 2386
PctI	GAATGC	1 cut(s)	1704
PdmI	GAANNNNTTC	3 cut(s)	661, 1224, 1518
PfeI	GAWTC	6 cut(s)	57, 211, 467, 997, 1906, 2425
Pfl23II	CGTACG	1 cut(s)	1879
PflFI	GACNNNGTC	1 cut(s)	587
PkrI	GCNGC	6 cut(s)	48, 177, 726, 1343, 1717, 2269
PleI	GAGTC	1 cut(s)	868
PpsI	GAGTC	1 cut(s)	868
PscI	ACATGT	1 cut(s)	2260
PsiI	TTATAA	1 cut(s)	1446
Psp6I	CCWGG	1 cut(s)	1962
PspFI	CCCAGC	2 cut(s)	1188, 1988
PspGI	CCWGG	1 cut(s)	1962
PspLI	CGTACG	1 cut(s)	1879
PspN4I	GGNNCC	6 cut(s)	41, 562, 1151, 1556, 1781, 2256
PspPI	GGNCC	5 cut(s)	957, 1186, 1758, 1966, 1991
PsrI	GAACNNNNNNTAC	2 cut(s)	2374, 2406
PsuI	RGATCY	2 cut(s)	346, 2254
PsyI	GACNNNGTC	1 cut(s)	587
PvuII	CAGCTG	2 cut(s)	46, 1718
RsaI	GTAC	5 cut(s)	260, 1358, 1881, 2383, 2444
RsaNI	GTAC	5 cut(s)	259, 1357, 1880, 2382, 2443
RseI	CAYNNNNRTG	1 cut(s)	409
SapI	GCTCTTC	1 cut(s)	2097
SaqAI	TTAA	5 cut(s)	822, 867, 873, 1413, 2084
SatI	GCNGC	6 cut(s)	47, 176, 725, 1342, 1716, 2268
Sau3AI	GATC	9 cut(s)	226, 346, 437, 529, 553, 1130, 1330, 2254, 2420
Sau96I	GGNCC	5 cut(s)	957, 1186, 1758, 1966, 1991
ScaI	AGTACT	1 cut(s)	2444
SchI	GAGTC	1 cut(s)	869
ScrFI	CCNGG	4 cut(s)	980, 1682, 1964, 1970
SduI	GDGCHC	3 cut(s)	1177, 1782, 1845
SfaNI	GCATC	3 cut(s)	793, 1288, 1667
SfcI	CTRYAG	1 cut(s)	1634
SinI	GGWCC	1 cut(s)	1966
SmiMI	CAYNNNNRTG	1 cut(s)	409
SseBI	AGGCCT	2 cut(s)	1962, 2062
SsiI	CCGC	6 cut(s)	1270, 1702, 1731, 2024, 2268, 2290
SspI	AATATT	1 cut(s)	2173
SspMI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
StuI	AGGCCT	2 cut(s)	1962, 2062
StyD4I	CCNGG	4 cut(s)	978, 1680, 1962, 1968
StyI	CCWWGG	4 cut(s)	564, 1303, 1527, 1994
TaaI	ACNGT	7 cut(s)	134, 427, 903, 1363, 1441, 1930, 2040
TaiI	ACGT	4 cut(s)	30, 309, 1263, 1881
TaqI	TCGA	9 cut(s)	107, 905, 1129, 1228, 1236, 1322, 1365, 1806, 2423
TatI	WGTACW	3 cut(s)	258, 1356, 2442
TauI	GCSGC	1 cut(s)	2270
TfiI	GAWTC	6 cut(s)	57, 211, 467, 997, 1906, 2425
Tru1I	TTAA	5 cut(s)	822, 867, 873, 1413, 2084
Tru9I	TTAA	5 cut(s)	822, 867, 873, 1413, 2084
TscAI	CASTG	4 cut(s)	139, 439, 692, 2043
TseI	GCWGC	5 cut(s)	46, 175, 724, 1341, 1715
TspGWI	ACGGA	3 cut(s)	1142, 1964, 2038
TspRI	CASTG	4 cut(s)	139, 439, 692, 2043
Tth111I	GACNNNGTC	1 cut(s)	587
VpaK11BI	GGWCC	1 cut(s)	1966
XapI	RAATTY	7 cut(s)	265, 476, 599, 739, 835, 854, 1280
XceI	RCATGY	2 cut(s)	1621, 2264
XcmI	CCANNNNNNNNNTGG	3 cut(s)	50, 379, 1865
XmaJI	CCTAGG	1 cut(s)	1303
XmnI	GAANNNNTTC	3 cut(s)	661, 1224, 1518
XspI	CTAG	6 cut(s)	282, 344, 792, 1046, 1193, 1304
ZrmI	AGTACT	1 cut(s)	2444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.