Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0016111

Physical Location & Seq

Genomic Coordinates Reverse (-)

27456666 .. 27458591

Gene Structure 1926 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018241

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGGTGCGTTTTCCAAACCTCTCAACCGCTGCTGCATGGAATTCCATTATACGAGAATCTGTAAACCAAAGCCATCCCCATAAAGTCCTCCTTCTCTTTCGTCAGATGAAGCAAAATGGTTTGGAACCTAACAACTTTACCTTTCCCTTCTTGTCTAAAGCATGTGCCAAGCTCGCCAACCTCAAATTATCCCAGACCATTCACACCCATGTTGTAAAATCACCATTTCAGTCTGATATCTTTGTGCAAACAGCTATTCTAGATATGTATGTCAAGTGTAATCAATTGGGTGATGCTTACAACCTGTTCGAGAAAATTACCATGAAAGACACGGCTTCCTGCAATGTGATGCTTATGGGTTTTGTGCGGTCGGGTTTTCTTGATAAAGTGTTATGTTTGGTCCATGACATGAGGTTTTCTGGGATTCAGCCTGATACAATTACGGTTATGGGTTTGATTCAGGCGAGTTTGGCTACAAAGAATTTGGAATTGGTGAAATCTATTCATGCGCTTGGAATTCAAATTGGGATAGAATGTGATGTTTCGATGGCTAATACTTGGATCTCTGCCTATTCCAAATGTGCTGATTTGGAGTCAGCCAAGGCTGTATTTGATAGGATTGACATGGGTGTGAGGACTGTTGTCTCATGGAATTCGATGATAGCGGGATATTCAAACTCAAATAAATTTCTTGATGTTCTAAATGTTTACAAACAGATGTTGTGTGATGGATACAGACCTGATATAAGCACTATTTTAAGTGTCCTTTCTTCCTGCAATCAACCCAATAAATTGGTCCAAGGTATGCTGATTCATTGTCAAGGAATTCAACTGGGCTGTGATTCTGATATTTTTGTTATCAATGACCTCATATCTATGTATTCCAAGTGTGGTGATATACTTTCTGCTAGGTTTTTATTCGATGGCATGCATGATAGAACTTGTGTCTCATGGACTGCTATGATCAGCGGGTATGCTGAAAATGGGAACCTGAATGAGGCGCTTGAGTTGTTTCATTTTATGGAAGCAACTGGTGAGAAACCTGATTTGGTTACTGTTCTTTCTCTCATTTCAGGCTGTGGTCATACAGGAGCACTTGGTCATGGAAAATGGATCCATAACTATGCCTTTTCAAATGGGTTAAGAGACAATACAGTAGTTTGCAATGCACTAATTGACATGTATGCAAAATGTGGAAATATAAAAAATGCTCGAGAGCTCTTCTACACCTTGCCAGTGACAACTGTTGTTTCCTGGACATCTATGATCGCAGGGTATGCTCTGAATGGTCAATGCAAGGAAGCTCTGGACCTTTTCTATTTGATGCTGGAGACAGGCATGAAACCAAACCGCTTAACATTTCTTGCTATTCTTCAAGCTTGTACTCATGCAGGTCTGCTTGAGAAAGGAATGGAGTTCTTTAACAAGATGACAGAAGTTTATTCTATGAATCCTGGGGTAGATCATTATTCGTGTATGGTCAATCTTCTTGGACGTAAAGGAAAATTAGAAGAAGCAGTCGAGCTTGTTAAAAGTATGCCAATGAAACCTGATGCTGGCATATGTGGTGCGTTACTTAGTGCTTGTAGGATTCACCATAACATGGAGATTGGTGAATACGCATTTAGCCGTCTCCTTGAGTTAGAGCCCCAGGTTGCAGTTCCATATGTGGAGATGGCTAACATATATGCATCACAGAGAAGGTGGGATGAAGTTGCTGCATTAAGAACAGTGATGAAATTTAACAAAGTGAAAAAATTTCCCGGGCAGAGCCTTGTTCATGTTAATGGGAACCCTCATGTATTTACAGTTGAAGATAGTGGTCATCCTGAAGCCTTATTTATATATGCAATGATAGGTACTTTGGATTTGCAGTCGAAAGAAGAACACACCACGCTCAAAGAGGTTGGGGACATGATTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04330 map04330

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

642

Amino Acids

71.3

Weight (kDa)

6.37

Isoelectric Point (pI)

37.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	11 - 57	2.2e-08	PPR repeat family
PPR_2	PF13041	110 - 154	2.5e-06	PPR repeat family
PPR_2	PF13041	213 - 259	3.8e-08	PPR repeat family
PPR_1	PF12854	314 - 342	5.4e-06	PPR repeat
PPR_2	PF13041	316 - 361	8.6e-11	PPR repeat family
PPR	PF01535	316 - 342	1.1e-07	PPR repeat
PPR_2	PF13041	415 - 462	4e-09	PPR repeat family
PPR_3	PF13812	416 - 461	8e-06	Pentatricopeptide repeat domain
PPR	PF01535	417 - 446	2.5e-07	PPR repeat
E_motif	PF20431	532 - 593	2.4e-17	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19191
fragaria_vesca	FvH4_1g22044
malus_domestica	MD15G1334500.v1.1
prunus_persica	Prupe.1G178100_v2.0.a1
pyrus_communis	pycom15g29090 pycom15g29100
rosa_chinensis	RchiOBHm_Chr2g0116121
rosa_laevigata	RLG00000018241
rosa_multiflora	Rmu_sc0002288.1_g000012
rosa_roxburghii	Rroxscaffold_2G00127480
rosa_rugosa	Rorug02G0203600
rosa_samantha	Rh2BG271000 Rh2CG266300 Rh2DG268200
rosa_wichuraiana	Rw2G020360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1382
AccB7I	CCANNNNNTGG	1 cut(s)	1603
AciI	CCGC	5 cut(s)	27, 367, 665, 969, 1351
AclWI	GGATC	3 cut(s)	569, 1108, 1121
AcsI	RAATTY	8 cut(s)	40, 481, 516, 652, 686, 825, 1739, 1757
AcuI	CTGAAG	1 cut(s)	1851
AfaI	GTAC	2 cut(s)	1384, 1861
AfiI	CCNNNNNNNGG	3 cut(s)	997, 1556, 1603
AflIII	ACRYGT	1 cut(s)	1179
AgsI	TTSAA	6 cut(s)	521, 675, 830, 1134, 1376, 1814
AjnI	CCWGG	3 cut(s)	1253, 1453, 1650
AjuI	GAANNNNNNNTTGG	4 cut(s)	473, 505, 1031, 1063
AluBI	AGCT	6 cut(s)	172, 254, 1219, 1304, 1379, 1525
AluI	AGCT	6 cut(s)	172, 254, 1219, 1304, 1379, 1525
Alw21I	GWGCWC	2 cut(s)	1096, 1221
Alw26I	GTCTC	5 cut(s)	649, 952, 1140, 1325, 1637
AlwI	GGATC	3 cut(s)	569, 1108, 1121
Ama87I	CYCGRG	2 cut(s)	1212, 1763
ApeKI	GCWGC	3 cut(s)	29, 32, 1718
ApoI	RAATTY	8 cut(s)	40, 481, 516, 652, 686, 825, 1739, 1757
AseI	ATTAAT	1 cut(s)	1920
AspLEI	GCGC	2 cut(s)	511, 1003
AspS9I	GGNCC	3 cut(s)	400, 796, 1309
AsuC2I	CCSGG	2 cut(s)	1764, 1765
AsuHPI	GGTGA	7 cut(s)	213, 302, 505, 905, 1046, 1586, 1625
AvaI	CYCGRG	2 cut(s)	1212, 1763
AvaII	GGWCC	3 cut(s)	400, 796, 1309
BamHI	GGATCC	1 cut(s)	1113
BanII	GRGCYC	2 cut(s)	1221, 1650
Bbv12I	GWGCWC	2 cut(s)	1096, 1221
BbvI	GCAGC	3 cut(s)	16, 19, 1705
BccI	CCATC	5 cut(s)	81, 541, 722, 917, 1669
BceAI	ACGGC	2 cut(s)	348, 1614
BciT130I	CCWGG	3 cut(s)	1255, 1455, 1652
BciVI	GTATCC	1 cut(s)	725
BclI	TGATCA	1 cut(s)	963
BcnI	CCSGG	2 cut(s)	1764, 1765
BcoDI	GTCTC	5 cut(s)	649, 952, 1140, 1325, 1637
BfaI	CTAG	2 cut(s)	260, 909
BfoI	RGCGCY	1 cut(s)	1004
BfuAI	ACCTGC	1 cut(s)	1382
BfuI	GTATCC	1 cut(s)	725
BisI	GCNGC	3 cut(s)	30, 33, 1719
BlsI	GCNGC	3 cut(s)	31, 34, 1720
Bme1390I	CCNGG	5 cut(s)	1255, 1455, 1652, 1764, 1765
Bme18I	GGWCC	3 cut(s)	400, 796, 1309
BmeT110I	CYCGRG	2 cut(s)	1212, 1763
BmgT120I	GGNCC	3 cut(s)	400, 796, 1309
BmiI	GGNNCC	4 cut(s)	126, 989, 1115, 1793
BmrFI	CCNGG	5 cut(s)	1255, 1455, 1652, 1764, 1765
BmrI	ACTGGG	1 cut(s)	842
BmsI	GCATC	5 cut(s)	283, 339, 1314, 1543, 1700
BmuI	ACTGGG	1 cut(s)	842
BoxI	GACNNNNGTC	1 cut(s)	641
BpmI	CTGGAG	1 cut(s)	1349
BpuEI	CTTGAG	3 cut(s)	1025, 1421, 1658
BpuMI	CCSGG	2 cut(s)	1764, 1765
BsaJI	CCNNGG	5 cut(s)	600, 799, 1454, 1650, 1763
Bsc4I	CCNNNNNNNGG	3 cut(s)	997, 1556, 1603
Bse1I	ACTGG	3 cut(s)	837, 1036, 1235
Bse3DI	GCAATG	3 cut(s)	349, 1171, 1857
BseBI	CCWGG	3 cut(s)	1255, 1455, 1652
BseDI	CCNNGG	5 cut(s)	600, 799, 1454, 1650, 1763
BseGI	GGATG	3 cut(s)	73, 1714, 1825
BseLI	CCNNNNNNNGG	3 cut(s)	997, 1556, 1603
BseMI	GCAATG	3 cut(s)	349, 1171, 1857
BseNI	ACTGG	3 cut(s)	837, 1036, 1235
BseXI	GCAGC	3 cut(s)	16, 19, 1705
Bsh1285I	CGRYCG	1 cut(s)	371
BsiEI	CGRYCG	1 cut(s)	371
BsiHKAI	GWGCWC	2 cut(s)	1096, 1221
BsiHKCI	CYCGRG	2 cut(s)	1212, 1763
BsiSI	CCGG	1 cut(s)	1764
BslI	CCNNNNNNNGG	3 cut(s)	997, 1556, 1603
BsmAI	GTCTC	5 cut(s)	649, 952, 1140, 1325, 1637
BsmBI	CGTCTC	1 cut(s)	1637
BsoBI	CYCGRG	2 cut(s)	1212, 1763
Bsp1286I	GDGCHC	3 cut(s)	1096, 1221, 1650
Bsp143I	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
BspACI	CCGC	5 cut(s)	27, 367, 665, 969, 1351
BspLI	GGNNCC	4 cut(s)	126, 989, 1115, 1793
BspMI	ACCTGC	1 cut(s)	1382
BspPI	GGATC	3 cut(s)	569, 1108, 1121
BspQI	GCTCTTC	1 cut(s)	1226
BsrDI	GCAATG	3 cut(s)	349, 1171, 1857
BsrI	ACTGG	3 cut(s)	837, 1036, 1235
BssECI	CCNNGG	5 cut(s)	600, 799, 1454, 1650, 1763
BssMI	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
BssT1I	CCWWGG	2 cut(s)	600, 799
Bst2UI	CCWGG	3 cut(s)	1255, 1455, 1652
Bst4CI	ACNGT	7 cut(s)	445, 640, 1057, 1156, 1246, 1732, 1810
Bst6I	CTCTTC	1 cut(s)	1226
BstAPI	GCANNNNNTGC	1 cut(s)	1277
BstC8I	GCNNGC	3 cut(s)	174, 929, 1558
BstDEI	CTNAG	1 cut(s)	1577
BstENI	CCTNNNNNAGG	1 cut(s)	995
BstF5I	GGATG	3 cut(s)	73, 1714, 1825
BstH2I	RGCGCY	1 cut(s)	1004
BstHHI	GCGC	2 cut(s)	511, 1003
BstKTI	GATC	5 cut(s)	564, 966, 1116, 1269, 1465
BstMAI	GTCTC	5 cut(s)	649, 952, 1140, 1325, 1637
BstMBI	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
BstMCI	CGRYCG	1 cut(s)	371
BstMWI	GCNNNNNNNGC	3 cut(s)	173, 470, 1277
BstNI	CCWGG	3 cut(s)	1255, 1455, 1652
BstNSI	RCATGY	3 cut(s)	165, 931, 1183
BstPAI	GACNNNNGTC	1 cut(s)	641
BstSCI	CCNGG	5 cut(s)	1253, 1453, 1650, 1762, 1763
BstV1I	GCAGC	3 cut(s)	16, 19, 1705
BstX2I	RGATCY	2 cut(s)	561, 1113
BstXI	CCANNNNNNTGG	1 cut(s)	793
BstYI	RGATCY	2 cut(s)	561, 1113
BsuI	GTATCC	1 cut(s)	725
BtsCI	GGATG	3 cut(s)	73, 1714, 1825
BtsIMutI	CAGTG	2 cut(s)	1242, 1737
BveI	ACCTGC	1 cut(s)	1382
Cac8I	GCNNGC	3 cut(s)	174, 929, 1558
CfoI	GCGC	2 cut(s)	511, 1003
Cfr13I	GGNCC	3 cut(s)	400, 796, 1309
Cfr9I	CCCGGG	1 cut(s)	1763
Csp6I	GTAC	2 cut(s)	1383, 1860
CviQI	GTAC	2 cut(s)	1383, 1860
DdeI	CTNAG	1 cut(s)	1577
DpnI	GATC	5 cut(s)	563, 965, 1115, 1268, 1464
DpnII	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
Eam1104I	CTCTTC	1 cut(s)	1226
EarI	CTCTTC	1 cut(s)	1226
Ecl136II	GAGCTC	1 cut(s)	1219
Eco130I	CCWWGG	2 cut(s)	600, 799
Eco24I	GRGCYC	2 cut(s)	1221, 1650
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	3 cut(s)	400, 796, 1309
Eco53kI	GAGCTC	1 cut(s)	1219
Eco57I	CTGAAG	1 cut(s)	1851
Eco88I	CYCGRG	2 cut(s)	1212, 1763
EcoICRI	GAGCTC	1 cut(s)	1219
EcoNI	CCTNNNNNAGG	1 cut(s)	995
EcoRI	GAATTC	4 cut(s)	40, 516, 652, 825
EcoRII	CCWGG	3 cut(s)	1253, 1453, 1650
EcoRV	GATATC	1 cut(s)	238
EcoT14I	CCWWGG	2 cut(s)	600, 799
EcoT22I	ATGCAT	2 cut(s)	933, 1693
EcoT38I	GRGCYC	2 cut(s)	1221, 1650
ErhI	CCWWGG	2 cut(s)	600, 799
Esp3I	CGTCTC	1 cut(s)	1637
FalI	AAGNNNNNCTT	2 cut(s)	75, 107
FauI	CCCGC	2 cut(s)	658, 962
FauNDI	CATATG	2 cut(s)	1562, 1666
FbaI	TGATCA	1 cut(s)	963
Fnu4HI	GCNGC	3 cut(s)	30, 33, 1719
FokI	GGATG	3 cut(s)	60, 1721, 1812
FriOI	GRGCYC	2 cut(s)	1221, 1650
Fsp4HI	GCNGC	3 cut(s)	30, 33, 1719
FspBI	CTAG	2 cut(s)	260, 909
GlaI	GCGC	2 cut(s)	510, 1002
GluI	GCNGC	3 cut(s)	30, 33, 1719
GsuI	CTGGAG	1 cut(s)	1349
HaeII	RGCGCY	1 cut(s)	1004
HapII	CCGG	1 cut(s)	1764
HhaI	GCGC	2 cut(s)	511, 1003
Hin6I	GCGC	2 cut(s)	509, 1001
HinP1I	GCGC	2 cut(s)	509, 1001
HindIII	AAGCTT	1 cut(s)	1377
HinfI	GANTC	8 cut(s)	56, 424, 457, 593, 811, 842, 1450, 1591
HpaII	CCGG	1 cut(s)	1764
HphI	GGTGA	7 cut(s)	213, 302, 505, 905, 1046, 1586, 1625
Hpy166II	GTNNAC	2 cut(s)	64, 709
Hpy188I	TCNGA	4 cut(s)	105, 235, 847, 1284
Hpy188III	TCNNGA	7 cut(s)	260, 310, 380, 692, 1214, 1307, 1829
Hpy8I	GTNNAC	2 cut(s)	64, 709
HpyAV	CCTTC	3 cut(s)	101, 157, 1695
HpyCH4III	ACNGT	7 cut(s)	445, 640, 1057, 1156, 1246, 1732, 1810
HpyCH4IV	ACGT	1 cut(s)	1495
HpyF10VI	GCNNNNNNNGC	3 cut(s)	173, 470, 1277
HpyF3I	CTNAG	1 cut(s)	1577
HpySE526I	ACGT	1 cut(s)	1495
HspAI	GCGC	2 cut(s)	509, 1001
Ksp22I	TGATCA	1 cut(s)	963
Kzo9I	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
LguI	GCTCTTC	1 cut(s)	1226
LmnI	GCTCC	1 cut(s)	1091
Lsp1109I	GCAGC	3 cut(s)	16, 19, 1705
LweI	GCATC	5 cut(s)	283, 339, 1314, 1543, 1700
MaeI	CTAG	2 cut(s)	260, 909
MaeII	ACGT	1 cut(s)	1495
MaeIII	GTNAC	3 cut(s)	1051, 1237, 1572
MalI	GATC	5 cut(s)	563, 965, 1115, 1268, 1464
MboI	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
MboII	GAAGA	7 cut(s)	762, 1213, 1364, 1478, 1523, 1826, 1895
MfeI	CAATTG	1 cut(s)	284
MflI	RGATCY	2 cut(s)	561, 1113
MhlI	GDGCHC	3 cut(s)	1096, 1221, 1650
MlyI	GAGTC	1 cut(s)	602
MnlI	CCTC	9 cut(s)	29, 98, 191, 405, 627, 878, 991, 1806, 1897
Mph1103I	ATGCAT	2 cut(s)	933, 1693
MslI	CAYNNNNRTG	5 cut(s)	207, 629, 875, 1122, 1785
MspA1I	CMGCKG	2 cut(s)	29, 969
MspI	CCGG	1 cut(s)	1764
MspR9I	CCNGG	5 cut(s)	1255, 1455, 1652, 1764, 1765
MunI	CAATTG	1 cut(s)	284
MvaI	CCWGG	3 cut(s)	1255, 1455, 1652
MwoI	GCNNNNNNNGC	3 cut(s)	173, 470, 1277
NciI	CCSGG	2 cut(s)	1764, 1765
NdeI	CATATG	2 cut(s)	1562, 1666
NdeII	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
NlaIV	GGNNCC	4 cut(s)	126, 989, 1115, 1793
NmuCI	GTSAC	1 cut(s)	1237
NsiI	ATGCAT	2 cut(s)	933, 1693
NspI	RCATGY	3 cut(s)	165, 931, 1183
PacI	TTAATTAA	1 cut(s)	1924
PaeI	GCATGC	1 cut(s)	931
PaeR7I	CTCGAG	1 cut(s)	1212
PciI	ACATGT	1 cut(s)	1179
PciSI	GCTCTTC	1 cut(s)	1226
PfeI	GAWTC	7 cut(s)	56, 424, 457, 811, 842, 1450, 1591
PflMI	CCANNNNNTGG	1 cut(s)	1603
PfoI	TCCNGGA	1 cut(s)	1253
PkrI	GCNGC	3 cut(s)	31, 34, 1720
PleI	GAGTC	1 cut(s)	601
PpsI	GAGTC	1 cut(s)	601
PscI	ACATGT	1 cut(s)	1179
PshAI	GACNNNNGTC	1 cut(s)	641
PshBI	ATTAAT	1 cut(s)	1920
Psp124BI	GAGCTC	1 cut(s)	1221
Psp6I	CCWGG	3 cut(s)	1253, 1453, 1650
PspGI	CCWGG	3 cut(s)	1253, 1453, 1650
PspN4I	GGNNCC	4 cut(s)	126, 989, 1115, 1793
PspPI	GGNCC	3 cut(s)	400, 796, 1309
PsuI	RGATCY	2 cut(s)	561, 1113
RsaI	GTAC	2 cut(s)	1384, 1861
RsaNI	GTAC	2 cut(s)	1383, 1860
RseI	CAYNNNNRTG	5 cut(s)	207, 629, 875, 1122, 1785
SacI	GAGCTC	1 cut(s)	1221
SapI	GCTCTTC	1 cut(s)	1226
SatI	GCNGC	3 cut(s)	30, 33, 1719
Sau3AI	GATC	5 cut(s)	561, 963, 1113, 1266, 1462
Sau96I	GGNCC	3 cut(s)	400, 796, 1309
SchI	GAGTC	1 cut(s)	602
ScrFI	CCNGG	5 cut(s)	1255, 1455, 1652, 1764, 1765
SduI	GDGCHC	3 cut(s)	1096, 1221, 1650
SfaNI	GCATC	5 cut(s)	283, 339, 1314, 1543, 1700
Sfr274I	CTCGAG	1 cut(s)	1212
SinI	GGWCC	3 cut(s)	400, 796, 1309
SlaI	CTCGAG	1 cut(s)	1212
SmaI	CCCGGG	1 cut(s)	1765
SmiMI	CAYNNNNRTG	5 cut(s)	207, 629, 875, 1122, 1785
SmlI	CTYRAG	4 cut(s)	1004, 1212, 1400, 1637
SmoI	CTYRAG	4 cut(s)	1004, 1212, 1400, 1637
SphI	GCATGC	1 cut(s)	931
SsiI	CCGC	5 cut(s)	27, 367, 665, 969, 1351
SspMI	CTAG	2 cut(s)	260, 909
SstI	GAGCTC	1 cut(s)	1221
StyD4I	CCNGG	5 cut(s)	1253, 1453, 1650, 1762, 1763
StyI	CCWWGG	2 cut(s)	600, 799
TaaI	ACNGT	7 cut(s)	445, 640, 1057, 1156, 1246, 1732, 1810
TaiI	ACGT	1 cut(s)	1498
TaqI	TCGA	7 cut(s)	309, 545, 656, 921, 1213, 1521, 1877
TatI	WGTACW	1 cut(s)	1382
TfiI	GAWTC	7 cut(s)	56, 424, 457, 811, 842, 1450, 1591
TscAI	CASTG	2 cut(s)	1242, 1737
TseFI	GTSAC	1 cut(s)	1237
TseI	GCWGC	3 cut(s)	29, 32, 1718
Tsp45I	GTSAC	1 cut(s)	1237
TspMI	CCCGGG	1 cut(s)	1763
TspRI	CASTG	2 cut(s)	1242, 1737
Van91I	CCANNNNNTGG	1 cut(s)	1603
VpaK11BI	GGWCC	3 cut(s)	400, 796, 1309
VspI	ATTAAT	1 cut(s)	1920
XagI	CCTNNNNNAGG	1 cut(s)	995
XapI	RAATTY	8 cut(s)	40, 481, 516, 652, 686, 825, 1739, 1757
XbaI	TCTAGA	1 cut(s)	259
XceI	RCATGY	3 cut(s)	165, 931, 1183
XhoI	CTCGAG	1 cut(s)	1212
XmaI	CCCGGG	1 cut(s)	1763
XspI	CTAG	2 cut(s)	260, 909
Zsp2I	ATGCAT	2 cut(s)	933, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.