Rh2BG271000

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0016111
Physical Location & Seq
Reverse (-)
29323590 .. 29330498
6909 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG271000.1

Sequence Viewer

Length: 1944 bp
ATGGTGAAGACAATGAGACATGGTGCGTTTTCAAAACTCTCAACCGCTGCTGCATGGAATTCCATTATACGAGAATTTGTAAACCAAAGCCATCCCCAAAAAGCCCTCCTTCTCTTTCGTCAGATGAAGCTAAATGGTTTGGAACCTAACAACTTTACCTTTCCCTTCTTGGCTAAAGCATGTGCCAAGCTCTCCAACCTCAAATTATCCCAGACCATTCACACCCATGTTGTAAAATCACCATTTCAGTCTGATATCTTTGTGCAAACAGCTATTCTAGATATGTATGTCAAGTGTAATCAATTGGGTGATGCTTACAACCTGTTCGAGAAAATTACCATGAAAGACACGGCTTCCTGCAATGTGATGCTTATGGGTTTTGTGCAGTCGGGTTTTCTTGATAAAGTGTTATGTTTGGTCCATGACATGAGGTTTGCTGGGATTCAGCCTGATACAATTACGGTTATGGGGTTGATTCAGGCGAGTTTGGCTACAAAGAATTTGGAATTGGTGAAATCTATTCATGCGTTTGGAATTCAAATTGGGATAGAATGCGATGTTTCGATGGCTAATACTTGGATCTCTGCCTATTCCAAATGTGCTGATTTGGAGTCAGCCAAGGCTGTATTTGATAGGATTGACATGGGTGTGAGGACTGTTGTCTCATGGAATTCGATGATAGCTGGATATTCAAACTCAAATAAATTTCTTGATGTTCTAAATGTTTACAAACAGATGTTGTCTGATGGATACAGACCTGATATAAGCACTATTTTAAGCGTCCTTTCTTCCTGCAATCAACCCAATAAATTGGTCCAAGGTATGCTGATTCATTGTCAAGGAATTCAACTGGGCTGTGATTCCGATATTTTTGTTATCAATGACCTTATATCTATGTATTCCAAGTGTGGTGATATACTTTCTGCTAGGTTTTTATTTGATGGCATGCATGATAGAACTTGTGTCTCATGGACTGCTATGATCAGTGGGTATGCTGAAAATGGGAATCTGAATGAGGCGCTTGAGTTGTTTCATTTTATGGAAGCAGCTGGTGAGAAACCTGATTTGGTTACTGTTCTTTCTCTCGTTTCAGGCTGTGGTCATACAGGAGCACTTGATCATGGAAAATGGATCCATAACTATGCCTTTTCAAATGGGTTAAGGGACAACACAATAGTTTGCAATGCACTAATTGACATGTATGCAAAATGTGGAAATATAAACAATGCTCGAGAGCTCTTCTACACCTTGCCAGTGACAACTGTTGTTTCCTGGACATCTATGATTGCGGGGTATGCTCTGAATGGTCAATACAAGGAAGCTCTGGACCTTTTCTATTTGATGCTGGAGACAGGCATGAAACCAAACCGCTTAACATTTCTTGCTATTCTTCAAGCTTGTTCTCATGCAGGTCTGCTTGAGAAAGGAATGGAGTTCTTTAACAAGATGACAGAAGTTTACTATATGAATCCTGGGGTAGATCATTATTCGTGTATGGTCAATCTTCTTGGACGTAAAGGAAAATTAGAAGAAGCAGTGGAGCTTGTTAAGAGTATGCCAATGAAACCTGATGCTGGCATATGGGGTGCGTTACTTAGTGCTTGCAGGATTCACCATAACATGGAGATTGGGGAATATGCATTTAGCCGTCTCCTTGAGTTAGAGCCTCAGGTTGCAGTTCCATATGTGGAGATGGCTAACATATATGCATCACAGAGAAGGTGGGATGAAGTTGCTGCATTAAGAACAGTGATGAAATTTAACAAAGTGAAAAAATTTCCCGGGCAGAGCCTTGTTCATGTTAATGGGAAGCCTCATGTATTTACAGTTGAAGATAGTGGTCATCCTGAAGCCTTATTTATATATGCAATGATAGGTACTTTGGATTTGCAGTCGAAAGAAGAACACACCACGCTCAAAGAGGTTGGTGACATGATTAATTAA

Protein Analysis

647

Amino Acids

72.15

Weight (kDa)

6.38

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 17 - 63 4.6e-10 PPR repeat family
PPR_2 PF13041 116 - 160 7.6e-06 PPR repeat family
PPR_2 PF13041 219 - 265 2.6e-08 PPR repeat family
PPR PF01535 221 - 250 9e-06 PPR repeat
PPR_1 PF12854 320 - 348 5.5e-06 PPR repeat
PPR_2 PF13041 322 - 367 3.8e-10 PPR repeat family
PPR PF01535 322 - 351 4.8e-08 PPR repeat
PPR_2 PF13041 421 - 468 5.4e-10 PPR repeat family
PPR_3 PF13812 422 - 467 1.3e-06 Pentatricopeptide repeat domain
PPR PF01535 423 - 452 1.4e-07 PPR repeat
E_motif PF20431 538 - 599 2.4e-17 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19191
fragaria_vesca FvH4_1g22044
malus_domestica MD15G1334500.v1.1
prunus_persica Prupe.1G178100_v2.0.a1
pyrus_communis pycom15g29090 pycom15g29100
rosa_chinensis RchiOBHm_Chr2g0116121
rosa_laevigata RLG00000018241
rosa_multiflora Rmu_sc0002288.1_g000012
rosa_roxburghii Rroxscaffold_2G00127480
rosa_rugosa Rorug02G0203600
rosa_samantha Rh2BG271000 Rh2CG266300 Rh2DG268200
rosa_wichuraiana Rw2G020360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1400
AccB7I CCANNNNNTGG 1 cut(s) 1621
AciI CCGC 3 cut(s) 45, 1289, 1369
AclWI GGATC 3 cut(s) 587, 1126, 1139
AcsI RAATTY 9 cut(s) 58, 74, 499, 534, 670, 704, 843, 1757, 1775
AcuI CTGAAG 1 cut(s) 1869
AfaI GTAC 1 cut(s) 1879
AfiI CCNNNNNNNGG 2 cut(s) 1574, 1621
AflIII ACRYGT 1 cut(s) 1197
AgsI TTSAA 7 cut(s) 33, 539, 693, 848, 1152, 1394, 1832
AjnI CCWGG 2 cut(s) 1271, 1471
AjuI GAANNNNNNNTTGG 4 cut(s) 491, 523, 1049, 1081
AluBI AGCT 9 cut(s) 130, 190, 272, 683, 1049, 1237, 1322, 1397, 1543
AluI AGCT 9 cut(s) 130, 190, 272, 683, 1049, 1237, 1322, 1397, 1543
Alw21I GWGCWC 2 cut(s) 1114, 1239
Alw26I GTCTC 5 cut(s) 10, 667, 970, 1343, 1655
AlwI GGATC 3 cut(s) 587, 1126, 1139
Ama87I CYCGRG 2 cut(s) 1230, 1781
ApeKI GCWGC 4 cut(s) 47, 50, 1046, 1736
ApoI RAATTY 9 cut(s) 58, 74, 499, 534, 670, 704, 843, 1757, 1775
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
AseI ATTAAT 1 cut(s) 1938
AspLEI GCGC 1 cut(s) 1021
AspS9I GGNCC 3 cut(s) 418, 814, 1327
AsuC2I CCSGG 2 cut(s) 1782, 1783
AsuHPI GGTGA 8 cut(s) 16, 231, 320, 523, 923, 1064, 1604, 1940
AvaI CYCGRG 2 cut(s) 1230, 1781
AvaII GGWCC 3 cut(s) 418, 814, 1327
AxyI CCTNAGG 1 cut(s) 1668
BamHI GGATCC 1 cut(s) 1131
BanII GRGCYC 1 cut(s) 1239
BbsI GAAGAC 1 cut(s) 14
Bbv12I GWGCWC 2 cut(s) 1114, 1239
BbvI GCAGC 4 cut(s) 34, 37, 1058, 1723
BccI CCATC 5 cut(s) 99, 559, 740, 935, 1687
BceAI ACGGC 2 cut(s) 366, 1632
BciT130I CCWGG 2 cut(s) 1273, 1473
BciVI GTATCC 1 cut(s) 743
BclI TGATCA 2 cut(s) 981, 1117
BcnI CCSGG 2 cut(s) 1782, 1783
BcoDI GTCTC 5 cut(s) 10, 667, 970, 1343, 1655
BfaI CTAG 2 cut(s) 278, 927
BfoI RGCGCY 1 cut(s) 1022
BfuAI ACCTGC 1 cut(s) 1400
BfuI GTATCC 1 cut(s) 743
BisI GCNGC 4 cut(s) 48, 51, 1047, 1737
BlsI GCNGC 4 cut(s) 49, 52, 1048, 1738
Bme1390I CCNGG 4 cut(s) 1273, 1473, 1782, 1783
Bme18I GGWCC 3 cut(s) 418, 814, 1327
BmeT110I CYCGRG 2 cut(s) 1230, 1781
BmgT120I GGNCC 3 cut(s) 418, 814, 1327
BmiI GGNNCC 2 cut(s) 144, 1133
BmrFI CCNGG 4 cut(s) 1273, 1473, 1782, 1783
BmrI ACTGGG 1 cut(s) 860
BmsI GCATC 5 cut(s) 301, 357, 1332, 1561, 1718
BmuI ACTGGG 1 cut(s) 860
BoxI GACNNNNGTC 1 cut(s) 659
BpiI GAAGAC 1 cut(s) 14
BpmI CTGGAG 1 cut(s) 1367
BpuEI CTTGAG 3 cut(s) 1043, 1439, 1676
BpuMI CCSGG 2 cut(s) 1782, 1783
BsaJI CCNNGG 4 cut(s) 618, 817, 1472, 1781
Bsc4I CCNNNNNNNGG 2 cut(s) 1574, 1621
Bse1I ACTGG 2 cut(s) 855, 1253
Bse21I CCTNAGG 1 cut(s) 1668
Bse3DI GCAATG 3 cut(s) 367, 1189, 1875
BseBI CCWGG 2 cut(s) 1273, 1473
BseDI CCNNGG 4 cut(s) 618, 817, 1472, 1781
BseGI GGATG 3 cut(s) 91, 1732, 1843
BseLI CCNNNNNNNGG 2 cut(s) 1574, 1621
BseMI GCAATG 3 cut(s) 367, 1189, 1875
BseMII CTCAG 1 cut(s) 1682
BseNI ACTGG 2 cut(s) 855, 1253
BseXI GCAGC 4 cut(s) 34, 37, 1058, 1723
BseYI CCCAGC 1 cut(s) 437
BsgI GTGCAG 1 cut(s) 404
BsiHKAI GWGCWC 2 cut(s) 1114, 1239
BsiHKCI CYCGRG 2 cut(s) 1230, 1781
BsiSI CCGG 1 cut(s) 1782
BslFI GGGAC 1 cut(s) 1178
BslI CCNNNNNNNGG 2 cut(s) 1574, 1621
BsmAI GTCTC 5 cut(s) 10, 667, 970, 1343, 1655
BsmBI CGTCTC 1 cut(s) 1655
BsmFI GGGAC 1 cut(s) 1178
BsmI GAATGC 1 cut(s) 557
BsoBI CYCGRG 2 cut(s) 1230, 1781
Bsp1286I GDGCHC 2 cut(s) 1114, 1239
Bsp143I GATC 5 cut(s) 579, 981, 1117, 1131, 1480
BspACI CCGC 3 cut(s) 45, 1289, 1369
BspCNI CTCAG 1 cut(s) 1681
BspLI GGNNCC 2 cut(s) 144, 1133
BspMI ACCTGC 1 cut(s) 1400
BspPI GGATC 3 cut(s) 587, 1126, 1139
BspQI GCTCTTC 1 cut(s) 1244
BsrDI GCAATG 3 cut(s) 367, 1189, 1875
BsrI ACTGG 2 cut(s) 855, 1253
BssECI CCNNGG 4 cut(s) 618, 817, 1472, 1781
BssMI GATC 5 cut(s) 579, 981, 1117, 1131, 1480
BssT1I CCWWGG 2 cut(s) 618, 817
Bst2UI CCWGG 2 cut(s) 1273, 1473
Bst4CI ACNGT 6 cut(s) 463, 658, 1075, 1264, 1750, 1828
Bst6I CTCTTC 1 cut(s) 1244
BstC8I GCNNGC 3 cut(s) 947, 1576, 1603
BstDEI CTNAG 2 cut(s) 1595, 1668
BstF5I GGATG 3 cut(s) 91, 1732, 1843
BstH2I RGCGCY 1 cut(s) 1022
BstHHI GCGC 1 cut(s) 1021
BstKTI GATC 5 cut(s) 582, 984, 1120, 1134, 1483
BstMAI GTCTC 5 cut(s) 10, 667, 970, 1343, 1655
BstMBI GATC 5 cut(s) 579, 981, 1117, 1131, 1480
BstMWI GCNNNNNNNGC 2 cut(s) 488, 1295
BstNI CCWGG 2 cut(s) 1273, 1473
BstNSI RCATGY 3 cut(s) 183, 949, 1201
BstPAI GACNNNNGTC 1 cut(s) 659
BstSCI CCNGG 4 cut(s) 1271, 1471, 1780, 1781
BstV1I GCAGC 4 cut(s) 34, 37, 1058, 1723
BstV2I GAAGAC 1 cut(s) 14
BstX2I RGATCY 2 cut(s) 579, 1131
BstXI CCANNNNNNTGG 1 cut(s) 811
BstYI RGATCY 2 cut(s) 579, 1131
Bsu36I CCTNAGG 1 cut(s) 1668
BsuI GTATCC 1 cut(s) 743
BtgZI GCGATG 1 cut(s) 570
BtsCI GGATG 3 cut(s) 91, 1732, 1843
BtsI GCAGTG 1 cut(s) 1542
BtsIMutI CAGTG 4 cut(s) 991, 1260, 1542, 1755
BveI ACCTGC 1 cut(s) 1400
Cac8I GCNNGC 3 cut(s) 947, 1576, 1603
CfoI GCGC 1 cut(s) 1021
Cfr13I GGNCC 3 cut(s) 418, 814, 1327
Cfr9I CCCGGG 1 cut(s) 1781
CseI GACGC 1 cut(s) 769
Csp6I GTAC 1 cut(s) 1878
CviQI GTAC 1 cut(s) 1878
DdeI CTNAG 2 cut(s) 1595, 1668
DpnI GATC 5 cut(s) 581, 983, 1119, 1133, 1482
DpnII GATC 5 cut(s) 579, 981, 1117, 1131, 1480
Eam1104I CTCTTC 1 cut(s) 1244
EarI CTCTTC 1 cut(s) 1244
Ecl136II GAGCTC 1 cut(s) 1237
Eco130I CCWWGG 2 cut(s) 618, 817
Eco24I GRGCYC 1 cut(s) 1239
Eco32I GATATC 1 cut(s) 256
Eco47I GGWCC 3 cut(s) 418, 814, 1327
Eco53kI GAGCTC 1 cut(s) 1237
Eco57I CTGAAG 1 cut(s) 1869
Eco81I CCTNAGG 1 cut(s) 1668
Eco88I CYCGRG 2 cut(s) 1230, 1781
EcoICRI GAGCTC 1 cut(s) 1237
EcoRI GAATTC 4 cut(s) 58, 534, 670, 843
EcoRII CCWGG 2 cut(s) 1271, 1471
EcoRV GATATC 1 cut(s) 256
EcoT14I CCWWGG 2 cut(s) 618, 817
EcoT22I ATGCAT 3 cut(s) 951, 1642, 1711
EcoT38I GRGCYC 1 cut(s) 1239
ErhI CCWWGG 2 cut(s) 618, 817
Esp3I CGTCTC 1 cut(s) 1655
FalI AAGNNNNNCTT 2 cut(s) 93, 125
FaqI GGGAC 1 cut(s) 1178
FauI CCCGC 1 cut(s) 1282
FauNDI CATATG 2 cut(s) 1580, 1684
FbaI TGATCA 2 cut(s) 981, 1117
Fnu4HI GCNGC 4 cut(s) 48, 51, 1047, 1737
FokI GGATG 3 cut(s) 78, 1739, 1830
FriOI GRGCYC 1 cut(s) 1239
Fsp4HI GCNGC 4 cut(s) 48, 51, 1047, 1737
FspBI CTAG 2 cut(s) 278, 927
GlaI GCGC 1 cut(s) 1020
GluI GCNGC 4 cut(s) 48, 51, 1047, 1737
GsaI CCCAGC 1 cut(s) 441
GsuI CTGGAG 1 cut(s) 1367
HaeII RGCGCY 1 cut(s) 1022
HapII CCGG 1 cut(s) 1782
HgaI GACGC 1 cut(s) 769
HhaI GCGC 1 cut(s) 1021
Hin6I GCGC 1 cut(s) 1019
HinP1I GCGC 1 cut(s) 1019
HindIII AAGCTT 1 cut(s) 1395
HinfI GANTC 8 cut(s) 442, 475, 611, 829, 860, 1006, 1468, 1609
HpaII CCGG 1 cut(s) 1782
HphI GGTGA 8 cut(s) 16, 231, 320, 523, 923, 1064, 1604, 1940
Hpy166II GTNNAC 3 cut(s) 82, 727, 1459
Hpy188I TCNGA 6 cut(s) 123, 253, 745, 865, 1011, 1302
Hpy188III TCNNGA 7 cut(s) 278, 328, 398, 710, 1232, 1325, 1847
Hpy8I GTNNAC 3 cut(s) 82, 727, 1459
HpyAV CCTTC 3 cut(s) 119, 175, 1713
HpyCH4III ACNGT 6 cut(s) 463, 658, 1075, 1264, 1750, 1828
HpyCH4IV ACGT 1 cut(s) 1513
HpyF10VI GCNNNNNNNGC 2 cut(s) 488, 1295
HpyF3I CTNAG 2 cut(s) 1595, 1668
HpySE526I ACGT 1 cut(s) 1513
HspAI GCGC 1 cut(s) 1019
Ksp22I TGATCA 2 cut(s) 981, 1117
Kzo9I GATC 5 cut(s) 579, 981, 1117, 1131, 1480
LguI GCTCTTC 1 cut(s) 1244
LmnI GCTCC 2 cut(s) 1109, 1540
Lsp1109I GCAGC 4 cut(s) 34, 37, 1058, 1723
LweI GCATC 5 cut(s) 301, 357, 1332, 1561, 1718
MaeI CTAG 2 cut(s) 278, 927
MaeII ACGT 1 cut(s) 1513
MaeIII GTNAC 4 cut(s) 1069, 1255, 1590, 1928
MalI GATC 5 cut(s) 581, 983, 1119, 1133, 1482
MboI GATC 5 cut(s) 579, 981, 1117, 1131, 1480
MboII GAAGA 8 cut(s) 19, 780, 1231, 1382, 1496, 1541, 1844, 1913
MfeI CAATTG 1 cut(s) 302
MflI RGATCY 2 cut(s) 579, 1131
MhlI GDGCHC 2 cut(s) 1114, 1239
MlyI GAGTC 1 cut(s) 620
MmeI TCCRAC 1 cut(s) 219
MnlI CCTC 8 cut(s) 116, 209, 423, 645, 1009, 1677, 1824, 1915
Mph1103I ATGCAT 3 cut(s) 951, 1642, 1711
MslI CAYNNNNRTG 4 cut(s) 225, 647, 1140, 1803
MspA1I CMGCKG 2 cut(s) 47, 1049
MspI CCGG 1 cut(s) 1782
MspR9I CCNGG 4 cut(s) 1273, 1473, 1782, 1783
MunI CAATTG 1 cut(s) 302
Mva1269I GAATGC 1 cut(s) 557
MvaI CCWGG 2 cut(s) 1273, 1473
MwoI GCNNNNNNNGC 2 cut(s) 488, 1295
NciI CCSGG 2 cut(s) 1782, 1783
NdeI CATATG 2 cut(s) 1580, 1684
NdeII GATC 5 cut(s) 579, 981, 1117, 1131, 1480
NlaIV GGNNCC 2 cut(s) 144, 1133
NmuCI GTSAC 2 cut(s) 1255, 1928
NsiI ATGCAT 3 cut(s) 951, 1642, 1711
NspI RCATGY 3 cut(s) 183, 949, 1201
PacI TTAATTAA 1 cut(s) 1942
PaeI GCATGC 1 cut(s) 949
PaeR7I CTCGAG 1 cut(s) 1230
PciI ACATGT 1 cut(s) 1197
PciSI GCTCTTC 1 cut(s) 1244
PctI GAATGC 1 cut(s) 557
PfeI GAWTC 7 cut(s) 442, 475, 829, 860, 1006, 1468, 1609
PflMI CCANNNNNTGG 1 cut(s) 1621
PfoI TCCNGGA 1 cut(s) 1271
PkrI GCNGC 4 cut(s) 49, 52, 1048, 1738
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
PscI ACATGT 1 cut(s) 1197
PshAI GACNNNNGTC 1 cut(s) 659
PshBI ATTAAT 1 cut(s) 1938
Psp124BI GAGCTC 1 cut(s) 1239
Psp6I CCWGG 2 cut(s) 1271, 1471
PspFI CCCAGC 1 cut(s) 437
PspGI CCWGG 2 cut(s) 1271, 1471
PspN4I GGNNCC 2 cut(s) 144, 1133
PspPI GGNCC 3 cut(s) 418, 814, 1327
PsuI RGATCY 2 cut(s) 579, 1131
PvuII CAGCTG 1 cut(s) 1049
RsaI GTAC 1 cut(s) 1879
RsaNI GTAC 1 cut(s) 1878
RseI CAYNNNNRTG 4 cut(s) 225, 647, 1140, 1803
SacI GAGCTC 1 cut(s) 1239
SapI GCTCTTC 1 cut(s) 1244
SatI GCNGC 4 cut(s) 48, 51, 1047, 1737
Sau3AI GATC 5 cut(s) 579, 981, 1117, 1131, 1480
Sau96I GGNCC 3 cut(s) 418, 814, 1327
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 4 cut(s) 1273, 1473, 1782, 1783
SduI GDGCHC 2 cut(s) 1114, 1239
SfaNI GCATC 5 cut(s) 301, 357, 1332, 1561, 1718
Sfr274I CTCGAG 1 cut(s) 1230
SinI GGWCC 3 cut(s) 418, 814, 1327
SlaI CTCGAG 1 cut(s) 1230
SmaI CCCGGG 1 cut(s) 1783
SmiMI CAYNNNNRTG 4 cut(s) 225, 647, 1140, 1803
SmlI CTYRAG 4 cut(s) 1022, 1230, 1418, 1655
SmoI CTYRAG 4 cut(s) 1022, 1230, 1418, 1655
SphI GCATGC 1 cut(s) 949
SsiI CCGC 3 cut(s) 45, 1289, 1369
SspMI CTAG 2 cut(s) 278, 927
SstI GAGCTC 1 cut(s) 1239
StyD4I CCNGG 4 cut(s) 1271, 1471, 1780, 1781
StyI CCWWGG 2 cut(s) 618, 817
TaaI ACNGT 6 cut(s) 463, 658, 1075, 1264, 1750, 1828
TaiI ACGT 1 cut(s) 1516
TaqI TCGA 5 cut(s) 327, 563, 674, 1231, 1895
TfiI GAWTC 7 cut(s) 442, 475, 829, 860, 1006, 1468, 1609
TscAI CASTG 4 cut(s) 991, 1260, 1542, 1755
TseFI GTSAC 2 cut(s) 1255, 1928
TseI GCWGC 4 cut(s) 47, 50, 1046, 1736
Tsp45I GTSAC 2 cut(s) 1255, 1928
TspMI CCCGGG 1 cut(s) 1781
TspRI CASTG 4 cut(s) 991, 1260, 1542, 1755
Van91I CCANNNNNTGG 1 cut(s) 1621
VpaK11BI GGWCC 3 cut(s) 418, 814, 1327
VspI ATTAAT 1 cut(s) 1938
XapI RAATTY 9 cut(s) 58, 74, 499, 534, 670, 704, 843, 1757, 1775
XbaI TCTAGA 1 cut(s) 277
XceI RCATGY 3 cut(s) 183, 949, 1201
XhoI CTCGAG 1 cut(s) 1230
XmaI CCCGGG 1 cut(s) 1781
XspI CTAG 2 cut(s) 278, 927
Zsp2I ATGCAT 3 cut(s) 951, 1642, 1711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.