RLG00000023142

AarF domain-containing protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
18753304 .. 18758728
5425 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023142

Sequence Viewer

Length: 1503 bp
ATGGTACCGAGCGGGAGGAAAGGGAAGGACATTGCGAGATTGGCCAAAGGCTTGTCTCTAATCGCCGAGGAATTTGCGAAGCGATCTCCGACTCTCCAGAGCGCCAAGAATGGCGATTTCGAAGCCCTACTCAAAAACGCCGTCGTTTCCGCCACCGACCTCTCCGGCCTCACCAAAGGCACCCTCTCCCAATTCTCCGGTGCTCCTTCCAACCCTACCTCCGCCACTCCCACTGCTAACAAAGCCGATTCCGTCGTCTACTTCAACCACCACGAGGAACCTCCTCCTCCTCCTCCTCAGCCGCCGCAGCTTGAAGAACAACCGCCGCCGCCGGCAAACAATGCCGCATCCTCCGTGGAGGTGGAGATGATTGATTCGAGAGCTCAACAACCGTTAGAACCAGAGACACAGTCGCCAGAACCACAACCTCCGCCGCCGCCATTGCAGAGGCGGAAGCCCAGAGAGAGACGAGTTCCTTCCACTCCCTTCTCCAGAGCACTGGGGTTTGCTGGTCTGGGAGCTGGGCTTGCCTGGGGAACACTTCAGGAGTCTACCAAGAGACTCATTTACGGCACGCCGCAGAGCTCACCGGGCAACCAATCTGCTGTTTCTCCATTTTTGTCTCCACAGAATGCAGAGCGTTTGGCTCTTGCACTCTGTCGAATGCGGGGAGCTGCTCTCAAATTGGGGCAGATGTTGAGCATACAGGACGAATCACTTGTGCCTGCGCCTATATTGGCTGCTCTCGATATTGTTCGTCAAGGTGCAGATGTGATGCCAAGGGCCCAGCTCAATCAGGTTTTGGATGCTGAGTTAGGACCTGGTTGGTCATCAAAGTTAACAAGTTTTGATTATGAACCTTTGGCTTCTGCAAGTATAGGCCAGGTGCACCGAGCTGTCACCAAGGACGGCATGGATGTTGCCATTAAAATTCAGTACCCTGGTGTAGCAGATAGCATTGGCAGTGACATCGAAAACGTTAAACTACTTCTAGATTATACTAATCTAATTCCAAAAGGACTTTACCTTGAAAGAGCTATGAAGGTGGCCAAAGAAGAATTATCTCGTGAATGCAACTATGAATTGGAGGCAGAAAGTCAAAAACGGTTTCGTGATTTGCTCTCTGATGCACATGGGTTTTATGTTCCGTTGGTTGTGGATGATATATCAAGCAAAAGAGTTTTAACTACTGAGCTTGTGTCTGGAATACCTATTGATAAGGTGGCGTTATTGAACCAGGAAACTCGTAACTATGTTGGAAGCAAGTTGCTAGAACTCACTTTGAAGGAGTTATTTGTTTTCCGCTTCATGCAGACTGATCCTAATTGGAGTAATTTCTTGTATGACGAGGCTACAAATACAATCAATCTGATAGACTTCGGAGCAGCTAGGGATTATCCCAAGACTTTTGTTGATGACTATCTAAGAATGGTGAGATCTCTTTACTTGAAATTTAGCCGGCTTTTTTTTGTTTCCCCTGTTTTTATCCCCTTACTGAGTTAA

Protein Analysis

501

Amino Acids

54.82

Weight (kDa)

5.82

Isoelectric Point (pI)

49.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 252 - 482 1.2e-70 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011021)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 2 cut(s) 4, 179
AccBSI CCGCTC 1 cut(s) 12
AccI GTMKAC 2 cut(s) 258, 551
AclI AACGTT 1 cut(s) 978
AclWI GGATC 1 cut(s) 1313
AcoI YGGCCR 2 cut(s) 42, 1047
AcsI RAATTY 3 cut(s) 71, 930, 1451
AcuI CTGAAG 1 cut(s) 527
AfaI GTAC 2 cut(s) 6, 938
AfiI CCNNNNNNNGG 1 cut(s) 274
AgsI TTSAA 6 cut(s) 265, 314, 1031, 1234, 1285, 1450
AjnI CCWGG 5 cut(s) 530, 820, 882, 940, 1236
Alw21I GWGCWC 5 cut(s) 205, 385, 499, 587, 891
Alw26I GTCTC 5 cut(s) 60, 398, 460, 553, 627
Alw44I GTGCAC 1 cut(s) 887
AlwI GGATC 1 cut(s) 1313
AoxI GGCC 5 cut(s) 42, 166, 783, 880, 1047
ApaI GGGCCC 1 cut(s) 787
ApaLI GTGCAC 1 cut(s) 887
ApeKI GCWGC 4 cut(s) 307, 674, 740, 1385
ApoI RAATTY 3 cut(s) 71, 930, 1451
ArsI GACNNNNNNTTYG 2 cut(s) 126, 158
Asp718I GGTACC 1 cut(s) 4
AspLEI GCGC 2 cut(s) 104, 730
AspS9I GGNCC 3 cut(s) 783, 784, 818
AsuC2I CCSGG 1 cut(s) 591
AsuHPI GGTGA 4 cut(s) 163, 579, 892, 1444
AsuII TTCGAA 1 cut(s) 120
AvaII GGWCC 1 cut(s) 818
BaeGI GKGCMC 2 cut(s) 787, 891
BalI TGGCCA 2 cut(s) 44, 1049
BanI GGYRCC 2 cut(s) 4, 179
BanII GRGCYC 3 cut(s) 385, 587, 787
BauI CACGAG 2 cut(s) 272, 1065
Bbv12I GWGCWC 5 cut(s) 205, 385, 499, 587, 891
BbvCI CCTCAGC 1 cut(s) 297
BbvI GCAGC 4 cut(s) 319, 661, 727, 1397
BceAI ACGGC 3 cut(s) 125, 586, 925
BcgI CGANNNNNNTGC 4 cut(s) 56, 90, 952, 986
BciT130I CCWGG 5 cut(s) 532, 822, 884, 942, 1238
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 5 cut(s) 60, 398, 460, 553, 627
BfaI CTAG 3 cut(s) 992, 1271, 1389
BfoI RGCGCY 1 cut(s) 105
BglII AGATCT 1 cut(s) 1436
Bme1390I CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
Bme18I GGWCC 1 cut(s) 818
BmgT120I GGNCC 3 cut(s) 783, 784, 818
BmiI GGNNCC 4 cut(s) 6, 181, 279, 785
BmrFI CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 4 cut(s) 356, 765, 796, 1117
BmuI ACTGGG 1 cut(s) 509
BplI GAGNNNNNCTC 2 cut(s) 663, 695
BpmI CTGGAG 2 cut(s) 80, 475
Bpu10I CCTNAGC 1 cut(s) 297
Bpu14I TTCGAA 1 cut(s) 120
BpuMI CCSGG 1 cut(s) 591
BsaBI GATNNNNATC 1 cut(s) 1419
BsaJI CCNNGG 6 cut(s) 66, 354, 531, 779, 903, 940
BsaWI WCCGGW 1 cut(s) 197
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 1 cut(s) 274
Bse118I RCCGGY 2 cut(s) 331, 1458
Bse1I ACTGG 1 cut(s) 504
Bse3DI GCAATG 2 cut(s) 30, 440
Bse8I GATNNNNATC 1 cut(s) 1419
BseBI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
BseDI CCNNGG 6 cut(s) 66, 354, 531, 779, 903, 940
BseGI GGATG 4 cut(s) 347, 811, 922, 1165
BseJI GATNNNNATC 1 cut(s) 1419
BseLI CCNNNNNNNGG 1 cut(s) 274
BseMI GCAATG 2 cut(s) 30, 440
BseMII CTCAG 4 cut(s) 311, 801, 1182, 1487
BseNI ACTGG 1 cut(s) 504
BseRI GAGGAG 5 cut(s) 273, 276, 279, 282, 285
BseSI GKGCMC 2 cut(s) 787, 891
BseXI GCAGC 4 cut(s) 319, 661, 727, 1397
BseYI CCCAGC 2 cut(s) 521, 786
BsgI GTGCAG 1 cut(s) 786
BshFI GGCC 5 cut(s) 44, 168, 785, 882, 1049
BshNI GGYRCC 2 cut(s) 4, 179
BsiHKAI GWGCWC 5 cut(s) 205, 385, 499, 587, 891
BsiSI CCGG 5 cut(s) 165, 198, 332, 590, 1459
BslI CCNNNNNNNGG 1 cut(s) 274
BsmAI GTCTC 5 cut(s) 60, 398, 460, 553, 627
BsmBI CGTCTC 1 cut(s) 460
BsmI GAATGC 3 cut(s) 637, 669, 1076
BsnI GGCC 5 cut(s) 44, 168, 785, 882, 1049
Bsp119I TTCGAA 1 cut(s) 120
Bsp120I GGGCCC 1 cut(s) 783
Bsp1286I GDGCHC 6 cut(s) 205, 385, 499, 587, 787, 891
Bsp143I GATC 3 cut(s) 83, 1318, 1436
BspANI GGCC 5 cut(s) 44, 168, 785, 882, 1049
BspCNI CTCAG 4 cut(s) 310, 802, 1183, 1488
BspLI GGNNCC 4 cut(s) 6, 181, 279, 785
BspPI GGATC 1 cut(s) 1313
BspT104I TTCGAA 1 cut(s) 120
BspT107I GGYRCC 2 cut(s) 4, 179
BsrBI CCGCTC 1 cut(s) 12
BsrDI GCAATG 2 cut(s) 30, 440
BsrFI RCCGGY 2 cut(s) 331, 1458
BsrI ACTGG 1 cut(s) 504
BssAI RCCGGY 2 cut(s) 331, 1458
BssECI CCNNGG 6 cut(s) 66, 354, 531, 779, 903, 940
BssMI GATC 3 cut(s) 83, 1318, 1436
BssSI CACGAG 2 cut(s) 272, 1065
BssT1I CCWWGG 2 cut(s) 779, 903
Bst2BI CACGAG 2 cut(s) 272, 1065
Bst2UI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
Bst4CI ACNGT 3 cut(s) 393, 411, 1107
BstAPI GCANNNNNTGC 1 cut(s) 341
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 5 cut(s) 333, 528, 575, 726, 1460
BstDEI CTNAG 5 cut(s) 297, 810, 1191, 1424, 1496
BstDSI CCRYGG 1 cut(s) 354
BstF5I GGATG 4 cut(s) 347, 811, 922, 1165
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 2 cut(s) 104, 730
BstKTI GATC 3 cut(s) 86, 1321, 1439
BstMAI GTCTC 5 cut(s) 60, 398, 460, 553, 627
BstMBI GATC 3 cut(s) 83, 1318, 1436
BstMWI GCNNNNNNNGC 7 cut(s) 41, 242, 307, 341, 442, 527, 591
BstNI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
BstSCI CCNGG 6 cut(s) 530, 589, 820, 882, 940, 1236
BstSLI GKGCMC 2 cut(s) 787, 891
BstV1I GCAGC 4 cut(s) 319, 661, 727, 1397
BstX2I RGATCY 1 cut(s) 1436
BstXI CCANNNNNNTGG 1 cut(s) 499
BstYI RGATCY 1 cut(s) 1436
BsuRI GGCC 5 cut(s) 44, 168, 785, 882, 1049
BtgI CCRYGG 1 cut(s) 354
BtsCI GGATG 4 cut(s) 347, 811, 922, 1165
BtsI GCAGTG 2 cut(s) 231, 970
BtsIMutI CAGTG 3 cut(s) 231, 497, 970
Cac8I GCNNGC 5 cut(s) 333, 528, 575, 726, 1460
CfoI GCGC 2 cut(s) 104, 730
Cfr10I RCCGGY 2 cut(s) 331, 1458
Cfr13I GGNCC 3 cut(s) 783, 784, 818
CsiI ACCWGGT 1 cut(s) 820
Csp6I GTAC 2 cut(s) 5, 937
CviAII CATG 3 cut(s) 913, 1133, 1309
CviQI GTAC 2 cut(s) 5, 937
DdeI CTNAG 5 cut(s) 297, 810, 1191, 1424, 1496
DpnI GATC 3 cut(s) 85, 1320, 1438
DpnII GATC 3 cut(s) 83, 1318, 1436
EaeI YGGCCR 2 cut(s) 42, 1047
EciI GGCGGA 4 cut(s) 139, 211, 420, 466
Ecl136II GAGCTC 2 cut(s) 383, 585
Eco130I CCWWGG 2 cut(s) 779, 903
Eco24I GRGCYC 3 cut(s) 385, 587, 787
Eco47I GGWCC 1 cut(s) 818
Eco53kI GAGCTC 2 cut(s) 383, 585
Eco57I CTGAAG 1 cut(s) 527
EcoICRI GAGCTC 2 cut(s) 383, 585
EcoO109I RGGNCCY 2 cut(s) 783, 818
EcoRII CCWGG 5 cut(s) 530, 820, 882, 940, 1236
EcoT14I CCWWGG 2 cut(s) 779, 903
EcoT38I GRGCYC 3 cut(s) 385, 587, 787
ErhI CCWWGG 2 cut(s) 779, 903
Esp3I CGTCTC 1 cut(s) 460
FaeI CATG 3 cut(s) 916, 1136, 1312
FatI CATG 3 cut(s) 912, 1132, 1308
FauI CCCGC 2 cut(s) 5, 660
FblI GTMKAC 2 cut(s) 258, 551
FokI GGATG 4 cut(s) 334, 818, 929, 1172
FriOI GRGCYC 3 cut(s) 385, 587, 787
FspBI CTAG 3 cut(s) 992, 1271, 1389
GlaI GCGC 2 cut(s) 103, 729
GsaI CCCAGC 2 cut(s) 525, 790
GsuI CTGGAG 2 cut(s) 80, 475
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 5 cut(s) 44, 168, 785, 882, 1049
HapII CCGG 5 cut(s) 165, 198, 332, 590, 1459
HhaI GCGC 2 cut(s) 104, 730
Hin1II CATG 3 cut(s) 916, 1136, 1312
Hin6I GCGC 2 cut(s) 102, 728
HinP1I GCGC 2 cut(s) 102, 728
HincII GTYRAC 1 cut(s) 840
HindII GTYRAC 1 cut(s) 840
HinfI GANTC 6 cut(s) 91, 248, 374, 548, 561, 713
HpaI GTTAAC 1 cut(s) 840
HpaII CCGG 5 cut(s) 165, 198, 332, 590, 1459
HphI GGTGA 4 cut(s) 163, 579, 892, 1444
Hpy166II GTNNAC 4 cut(s) 259, 552, 840, 889
Hpy188I TCNGA 4 cut(s) 90, 1126, 1371, 1382
Hpy188III TCNNGA 9 cut(s) 97, 378, 492, 545, 746, 992, 1067, 1112, 1203
Hpy8I GTNNAC 4 cut(s) 259, 552, 840, 889
Hpy99I CGWCG 2 cut(s) 146, 257
HpyAV CCTTC 6 cut(s) 19, 216, 486, 496, 1036, 1279
HpyCH4III ACNGT 3 cut(s) 393, 411, 1107
HpyCH4IV ACGT 1 cut(s) 978
HpyCH4V TGCA 9 cut(s) 445, 635, 653, 767, 872, 889, 1074, 1130, 1312
HpyF10VI GCNNNNNNNGC 7 cut(s) 41, 242, 307, 341, 442, 527, 591
HpyF3I CTNAG 5 cut(s) 297, 810, 1191, 1424, 1496
HpySE526I ACGT 1 cut(s) 978
Hsp92II CATG 3 cut(s) 916, 1136, 1312
HspAI GCGC 2 cut(s) 102, 728
KpnI GGTACC 1 cut(s) 8
KroI GCCGGC 2 cut(s) 331, 1458
KroNI GCCGGC 2 cut(s) 333, 1460
KspAI GTTAAC 1 cut(s) 840
Kzo9I GATC 3 cut(s) 83, 1318, 1436
LmnI GCTCC 4 cut(s) 208, 518, 671, 1382
Lsp1109I GCAGC 4 cut(s) 319, 661, 727, 1397
LweI GCATC 4 cut(s) 356, 765, 796, 1117
MabI ACCWGGT 1 cut(s) 820
MaeI CTAG 3 cut(s) 992, 1271, 1389
MaeII ACGT 1 cut(s) 978
MaeIII GTNAC 3 cut(s) 898, 965, 1247
MalI GATC 3 cut(s) 85, 1320, 1438
MbiI CCGCTC 1 cut(s) 12
MboI GATC 3 cut(s) 83, 1318, 1436
MboII GAAGA 2 cut(s) 326, 1067
MflI RGATCY 1 cut(s) 1436
MhlI GDGCHC 6 cut(s) 205, 385, 499, 587, 787, 891
MlsI TGGCCA 2 cut(s) 44, 1049
MluNI TGGCCA 2 cut(s) 44, 1049
MlyI GAGTC 3 cut(s) 85, 555, 557
MmeI TCCRAC 3 cut(s) 113, 234, 1237
Mox20I TGGCCA 2 cut(s) 44, 1049
MroNI GCCGGC 2 cut(s) 331, 1458
MscI TGGCCA 2 cut(s) 44, 1049
MseI TTAA 5 cut(s) 839, 927, 981, 1184, 1501
Msp20I TGGCCA 2 cut(s) 44, 1049
MspI CCGG 5 cut(s) 165, 198, 332, 590, 1459
MspR9I CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
Mva1269I GAATGC 3 cut(s) 637, 669, 1076
MvaI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
MwoI GCNNNNNNNGC 7 cut(s) 41, 242, 307, 341, 442, 527, 591
NaeI GCCGGC 2 cut(s) 333, 1460
NciI CCSGG 1 cut(s) 591
NdeII GATC 3 cut(s) 83, 1318, 1436
NgoMIV GCCGGC 2 cut(s) 331, 1458
NlaIII CATG 3 cut(s) 916, 1136, 1312
NlaIV GGNNCC 4 cut(s) 6, 181, 279, 785
NmeAIII GCCGAG 1 cut(s) 91
NmuCI GTSAC 2 cut(s) 898, 965
NspV TTCGAA 1 cut(s) 120
PctI GAATGC 3 cut(s) 637, 669, 1076
PdiI GCCGGC 2 cut(s) 333, 1460
PfeI GAWTC 3 cut(s) 248, 374, 713
PflFI GACNNNGTC 1 cut(s) 409
PleI GAGTC 3 cut(s) 85, 555, 556
PpsI GAGTC 3 cut(s) 85, 555, 556
PpuMI RGGWCCY 1 cut(s) 818
Psp124BI GAGCTC 2 cut(s) 385, 587
Psp1406I AACGTT 1 cut(s) 978
Psp5II RGGWCCY 1 cut(s) 818
Psp6I CCWGG 5 cut(s) 530, 820, 882, 940, 1236
PspFI CCCAGC 2 cut(s) 521, 786
PspGI CCWGG 5 cut(s) 530, 820, 882, 940, 1236
PspN4I GGNNCC 4 cut(s) 6, 181, 279, 785
PspOMI GGGCCC 1 cut(s) 783
PspPI GGNCC 3 cut(s) 783, 784, 818
PspPPI RGGWCCY 1 cut(s) 818
PsuI RGATCY 1 cut(s) 1436
PsyI GACNNNGTC 1 cut(s) 409
RsaI GTAC 2 cut(s) 6, 938
RsaNI GTAC 2 cut(s) 5, 937
SacI GAGCTC 2 cut(s) 385, 587
SaqAI TTAA 5 cut(s) 839, 927, 981, 1184, 1501
Sau3AI GATC 3 cut(s) 83, 1318, 1436
Sau96I GGNCC 3 cut(s) 783, 784, 818
SchI GAGTC 3 cut(s) 85, 555, 557
ScrFI CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
SduI GDGCHC 6 cut(s) 205, 385, 499, 587, 787, 891
SexAI ACCWGGT 1 cut(s) 820
SfaNI GCATC 4 cut(s) 356, 765, 796, 1117
SfuI TTCGAA 1 cut(s) 120
SinI GGWCC 1 cut(s) 818
SspMI CTAG 3 cut(s) 992, 1271, 1389
SstI GAGCTC 2 cut(s) 385, 587
StyD4I CCNGG 6 cut(s) 530, 589, 820, 882, 940, 1236
StyI CCWWGG 2 cut(s) 779, 903
TaaI ACNGT 3 cut(s) 393, 411, 1107
TaiI ACGT 1 cut(s) 981
TaqI TCGA 5 cut(s) 120, 377, 661, 747, 972
TauI GCSGC 8 cut(s) 304, 307, 328, 331, 347, 436, 439, 580
TfiI GAWTC 3 cut(s) 248, 374, 713
Tru1I TTAA 5 cut(s) 839, 927, 981, 1184, 1501
Tru9I TTAA 5 cut(s) 839, 927, 981, 1184, 1501
TscAI CASTG 3 cut(s) 238, 504, 970
TseFI GTSAC 2 cut(s) 898, 965
TseI GCWGC 4 cut(s) 307, 674, 740, 1385
Tsp45I GTSAC 2 cut(s) 898, 965
TspDTI ATGAA 4 cut(s) 870, 1055, 1095, 1297
TspGWI ACGGA 3 cut(s) 241, 343, 1137
TspRI CASTG 3 cut(s) 238, 504, 970
Tth111I GACNNNGTC 1 cut(s) 409
VneI GTGCAC 1 cut(s) 887
VpaK11BI GGWCC 1 cut(s) 818
XapI RAATTY 3 cut(s) 71, 930, 1451
XbaI TCTAGA 1 cut(s) 991
XcmI CCANNNNNNNNNTGG 1 cut(s) 910
XmiI GTMKAC 2 cut(s) 258, 551
XspI CTAG 3 cut(s) 992, 1271, 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.