Rh3BG304400

AarF domain-containing protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
30752612 .. 30758287
5676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG304400.1

Sequence Viewer

Length: 1377 bp
ATGGTACTGAGCGGGAGGAAAGGGAAGGACATTGCGAGATTGGCCAAAGGCTTGTCTCTAATCGCCGAGGAATTTGCGAAGCGATCTCCGACTCTCCAGAGCGCCAAGAAAGGCGATTTCCAAGCCCTACTCAAAAACGCCGTCGTTTCCGCCACCGACCTCTCCGGCCTCACCAAAGGCACCCTCTCCCAATTCTCCAATGCTCCTTCTAACCCTACCTCCGCCACTCCCACTGCTAACAAACCCGATTCCGTCGTCTACTTCAACCACCACCACGAACCTCCTCCTCCTCCTCCGCAGCCTCAGCTTGAACAACAACCGCCGCCGCCGCCGGCAAACAATGCCGCATCCTCCGTGGAGGTGGAGGTGCTCGATTCGAGGGCTCAACAACCGTTAGAACCAGAGACACAGTCGCCACAACCACAACCTCCGCCGCCGCCATTGCAGAGGCGGAAGCCCAGAGAGAGACGAGTTCCTTCCACTCCTTTCTCTAGAGCACTGGGGTTTGCTGGTCTGGGAGCTGGGCTTGCCTGGGGAACACTTCAGGAGTCTACCAAGAGACTCATTTACGGCACGCCGCAGAGCTCACCGGGCAACCAATCTGCTGTTTCTCCGTTTTTGTCTCCACAGAATGCAGAGCGTTTGGCTCTTGCACTCTGTCGAATGCGGGGAGCTGCTCTCAAATTGGGGCAGATGTTGAGCATACAGGACGAATCGCTTGTGCCTGCTCCTATATTGGCTGCTCTCGATATTGTTCGTCAAGGTGCTGATGTGATGCCGAGGGCCCAGCTCAATCAGGTTCTGGATGCTGAGTTAGGACCTGGTTGGTCATCAAAGTTAACAAGTTTCGATTATGAACCTTTGGCTTCTGCAAGTATAGGCCAGGTGCACCGAGCTGTCACCAAGGACGGCATGGATGTTGCCATTAAAATTCAGTACCCTGGTGTAGCAGATAGCATTGGCAGTGACATCGAAAACGTTAAACTACTTCTAGATTATACTAATCTAATTCCAAAAGGACTTTACCTTGAAAGAGCTATGAAGGTGGCCAAAGAAGAATTATCTCGTGAATGCAACTATGAATTGGAAGCAGAAAATCAAAAACGGTTTCGTTATTTGCTCTCTGATGCACAGGGGTTTTATGTTCCGTTGGTTGTGGATGATATATCAAGCAAAAGAGTTTTAACTACTGAGCTTGTGTCTGGAATACCTATTGATAAAGTGGCGTTATTGAACCAGGAAACTCGTAACTATGTTGGAAGAAAGTTGCTAGAACTCACTTTGGAAGAGTTATTTGTTTTCCGCTTCATGCAGGCATGTTTTGTGCTGTCTACACACAAGCACACACACACATATATCATTGATTTACATGTTTAA

Protein Analysis

458

Amino Acids

50.07

Weight (kDa)

8.26

Isoelectric Point (pI)

50.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC1 PF03109 252 - 439 3.6e-56 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011021)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 179
AccBSI CCGCTC 1 cut(s) 12
AccI GTMKAC 3 cut(s) 258, 551, 1331
AclI AACGTT 1 cut(s) 978
AcoI YGGCCR 2 cut(s) 42, 1047
AcsI RAATTY 2 cut(s) 71, 930
AcuI CTGAAG 1 cut(s) 527
AfaI GTAC 2 cut(s) 6, 938
AflIII ACRYGT 1 cut(s) 1369
AgsI TTSAA 4 cut(s) 265, 311, 1031, 1234
AjnI CCWGG 5 cut(s) 530, 820, 882, 940, 1236
AluBI AGCT 8 cut(s) 307, 521, 585, 674, 790, 896, 1037, 1195
AluI AGCT 8 cut(s) 307, 521, 585, 674, 790, 896, 1037, 1195
Alw21I GWGCWC 4 cut(s) 372, 499, 587, 891
Alw26I GTCTC 5 cut(s) 60, 398, 460, 553, 627
Alw44I GTGCAC 1 cut(s) 887
AlwNI CAGNNNCTG 1 cut(s) 802
AoxI GGCC 5 cut(s) 42, 166, 783, 880, 1047
ApaI GGGCCC 1 cut(s) 787
ApaLI GTGCAC 1 cut(s) 887
ApeKI GCWGC 3 cut(s) 298, 674, 740
ApoI RAATTY 2 cut(s) 71, 930
ArsI GACNNNNNNTTYG 2 cut(s) 126, 158
AspLEI GCGC 1 cut(s) 104
AspS9I GGNCC 3 cut(s) 783, 784, 818
AsuC2I CCSGG 1 cut(s) 591
AsuHPI GGTGA 3 cut(s) 163, 579, 892
AvaII GGWCC 1 cut(s) 818
BaeGI GKGCMC 2 cut(s) 787, 891
BalI TGGCCA 2 cut(s) 44, 1049
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 3 cut(s) 385, 587, 787
BauI CACGAG 1 cut(s) 1065
Bbv12I GWGCWC 4 cut(s) 372, 499, 587, 891
BbvCI CCTCAGC 1 cut(s) 303
BbvI GCAGC 3 cut(s) 310, 661, 727
BceAI ACGGC 3 cut(s) 125, 586, 925
BcgI CGANNNNNNTGC 4 cut(s) 56, 90, 952, 986
BciT130I CCWGG 5 cut(s) 532, 822, 884, 942, 1238
BcnI CCSGG 1 cut(s) 591
BcoDI GTCTC 5 cut(s) 60, 398, 460, 553, 627
BfaI CTAG 3 cut(s) 492, 992, 1271
BfoI RGCGCY 1 cut(s) 105
Bme1390I CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
Bme18I GGWCC 1 cut(s) 818
BmgT120I GGNCC 3 cut(s) 783, 784, 818
BmiI GGNNCC 2 cut(s) 181, 785
BmrFI CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 4 cut(s) 356, 765, 796, 1117
BmuI ACTGGG 1 cut(s) 509
BplI GAGNNNNNCTC 2 cut(s) 663, 695
BpmI CTGGAG 1 cut(s) 80
Bpu10I CCTNAGC 1 cut(s) 303
BpuMI CCSGG 1 cut(s) 591
BsaJI CCNNGG 6 cut(s) 66, 354, 531, 779, 903, 940
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bse118I RCCGGY 1 cut(s) 331
Bse1I ACTGG 1 cut(s) 504
Bse3DI GCAATG 2 cut(s) 30, 440
BseBI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
BseDI CCNNGG 6 cut(s) 66, 354, 531, 779, 903, 940
BseGI GGATG 4 cut(s) 347, 811, 922, 1165
BseMI GCAATG 2 cut(s) 30, 440
BseMII CTCAG 3 cut(s) 317, 801, 1182
BseNI ACTGG 1 cut(s) 504
BseRI GAGGAG 4 cut(s) 273, 276, 279, 282
BseSI GKGCMC 2 cut(s) 787, 891
BseXI GCAGC 3 cut(s) 310, 661, 727
BseYI CCCAGC 2 cut(s) 521, 786
BshFI GGCC 5 cut(s) 44, 168, 785, 882, 1049
BshNI GGYRCC 1 cut(s) 179
BsiHKAI GWGCWC 4 cut(s) 372, 499, 587, 891
BsiSI CCGG 3 cut(s) 165, 332, 590
BsmAI GTCTC 5 cut(s) 60, 398, 460, 553, 627
BsmBI CGTCTC 1 cut(s) 460
BsmI GAATGC 3 cut(s) 637, 669, 1076
BsnI GGCC 5 cut(s) 44, 168, 785, 882, 1049
Bsp120I GGGCCC 1 cut(s) 783
Bsp1286I GDGCHC 6 cut(s) 372, 385, 499, 587, 787, 891
Bsp143I GATC 1 cut(s) 83
BspANI GGCC 5 cut(s) 44, 168, 785, 882, 1049
BspCNI CTCAG 3 cut(s) 316, 802, 1183
BspLI GGNNCC 2 cut(s) 181, 785
BspT107I GGYRCC 1 cut(s) 179
BsrBI CCGCTC 1 cut(s) 12
BsrDI GCAATG 2 cut(s) 30, 440
BsrFI RCCGGY 1 cut(s) 331
BsrI ACTGG 1 cut(s) 504
BssAI RCCGGY 1 cut(s) 331
BssECI CCNNGG 6 cut(s) 66, 354, 531, 779, 903, 940
BssMI GATC 1 cut(s) 83
BssSI CACGAG 1 cut(s) 1065
BssT1I CCWWGG 1 cut(s) 903
Bst2BI CACGAG 1 cut(s) 1065
Bst2UI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
Bst4CI ACNGT 3 cut(s) 393, 411, 1107
Bst6I CTCTTC 1 cut(s) 1281
BstAPI GCANNNNNTGC 1 cut(s) 341
BstC8I GCNNGC 5 cut(s) 333, 528, 575, 726, 1314
BstDEI CTNAG 4 cut(s) 8, 303, 810, 1191
BstDSI CCRYGG 1 cut(s) 354
BstF5I GGATG 4 cut(s) 347, 811, 922, 1165
BstH2I RGCGCY 1 cut(s) 105
BstHHI GCGC 1 cut(s) 104
BstKTI GATC 1 cut(s) 86
BstMAI GTCTC 5 cut(s) 60, 398, 460, 553, 627
BstMBI GATC 1 cut(s) 83
BstMWI GCNNNNNNNGC 7 cut(s) 41, 304, 328, 341, 442, 527, 591
BstNI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
BstNSI RCATGY 2 cut(s) 1320, 1373
BstSCI CCNGG 6 cut(s) 530, 589, 820, 882, 940, 1236
BstSLI GKGCMC 2 cut(s) 787, 891
BstV1I GCAGC 3 cut(s) 310, 661, 727
BsuRI GGCC 5 cut(s) 44, 168, 785, 882, 1049
BtgI CCRYGG 1 cut(s) 354
BtsCI GGATG 4 cut(s) 347, 811, 922, 1165
BtsI GCAGTG 2 cut(s) 231, 970
BtsIMutI CAGTG 3 cut(s) 231, 497, 970
Cac8I GCNNGC 5 cut(s) 333, 528, 575, 726, 1314
CaiI CAGNNNCTG 1 cut(s) 802
CfoI GCGC 1 cut(s) 104
Cfr10I RCCGGY 1 cut(s) 331
Cfr13I GGNCC 3 cut(s) 783, 784, 818
CsiI ACCWGGT 1 cut(s) 820
Csp6I GTAC 2 cut(s) 5, 937
CviAII CATG 4 cut(s) 913, 1309, 1317, 1370
CviQI GTAC 2 cut(s) 5, 937
DdeI CTNAG 4 cut(s) 8, 303, 810, 1191
DpnI GATC 1 cut(s) 85
DpnII GATC 1 cut(s) 83
EaeI YGGCCR 2 cut(s) 42, 1047
Eam1104I CTCTTC 1 cut(s) 1281
EarI CTCTTC 1 cut(s) 1281
EciI GGCGGA 4 cut(s) 139, 211, 420, 466
Ecl136II GAGCTC 1 cut(s) 585
Eco130I CCWWGG 1 cut(s) 903
Eco24I GRGCYC 3 cut(s) 385, 587, 787
Eco47I GGWCC 1 cut(s) 818
Eco53kI GAGCTC 1 cut(s) 585
Eco57I CTGAAG 1 cut(s) 527
EcoICRI GAGCTC 1 cut(s) 585
EcoO109I RGGNCCY 2 cut(s) 783, 818
EcoRII CCWGG 5 cut(s) 530, 820, 882, 940, 1236
EcoT14I CCWWGG 1 cut(s) 903
EcoT38I GRGCYC 3 cut(s) 385, 587, 787
ErhI CCWWGG 1 cut(s) 903
Esp3I CGTCTC 1 cut(s) 460
FaeI CATG 4 cut(s) 916, 1312, 1320, 1373
FatI CATG 4 cut(s) 912, 1308, 1316, 1369
FauI CCCGC 2 cut(s) 5, 660
FblI GTMKAC 3 cut(s) 258, 551, 1331
FokI GGATG 4 cut(s) 334, 818, 929, 1172
FriOI GRGCYC 3 cut(s) 385, 587, 787
FspBI CTAG 3 cut(s) 492, 992, 1271
GlaI GCGC 1 cut(s) 103
GsaI CCCAGC 2 cut(s) 525, 790
GsuI CTGGAG 1 cut(s) 80
HaeII RGCGCY 1 cut(s) 105
HaeIII GGCC 5 cut(s) 44, 168, 785, 882, 1049
HapII CCGG 3 cut(s) 165, 332, 590
HhaI GCGC 1 cut(s) 104
Hin1II CATG 4 cut(s) 916, 1312, 1320, 1373
Hin6I GCGC 1 cut(s) 102
HinP1I GCGC 1 cut(s) 102
HincII GTYRAC 1 cut(s) 840
HindII GTYRAC 1 cut(s) 840
HinfI GANTC 6 cut(s) 91, 248, 374, 548, 561, 713
HpaI GTTAAC 1 cut(s) 840
HpaII CCGG 3 cut(s) 165, 332, 590
HphI GGTGA 3 cut(s) 163, 579, 892
Hpy166II GTNNAC 5 cut(s) 259, 552, 840, 889, 1332
Hpy188I TCNGA 2 cut(s) 90, 1126
Hpy188III TCNNGA 8 cut(s) 97, 492, 545, 746, 803, 992, 1067, 1203
Hpy8I GTNNAC 5 cut(s) 259, 552, 840, 889, 1332
Hpy99I CGWCG 2 cut(s) 146, 257
HpyAV CCTTC 4 cut(s) 19, 216, 486, 1036
HpyCH4III ACNGT 3 cut(s) 393, 411, 1107
HpyCH4IV ACGT 1 cut(s) 978
HpyCH4V TGCA 8 cut(s) 445, 635, 653, 872, 889, 1074, 1130, 1312
HpyF10VI GCNNNNNNNGC 7 cut(s) 41, 304, 328, 341, 442, 527, 591
HpyF3I CTNAG 4 cut(s) 8, 303, 810, 1191
HpySE526I ACGT 1 cut(s) 978
Hsp92II CATG 4 cut(s) 916, 1312, 1320, 1373
HspAI GCGC 1 cut(s) 102
KroI GCCGGC 1 cut(s) 331
KroNI GCCGGC 1 cut(s) 333
KspAI GTTAAC 1 cut(s) 840
Kzo9I GATC 1 cut(s) 83
LmnI GCTCC 4 cut(s) 208, 518, 671, 733
Lsp1109I GCAGC 3 cut(s) 310, 661, 727
LweI GCATC 4 cut(s) 356, 765, 796, 1117
MabI ACCWGGT 1 cut(s) 820
MaeI CTAG 3 cut(s) 492, 992, 1271
MaeII ACGT 1 cut(s) 978
MaeIII GTNAC 3 cut(s) 898, 965, 1247
MalI GATC 1 cut(s) 85
MbiI CCGCTC 1 cut(s) 12
MboI GATC 1 cut(s) 83
MboII GAAGA 3 cut(s) 1067, 1272, 1298
MhlI GDGCHC 6 cut(s) 372, 385, 499, 587, 787, 891
MlsI TGGCCA 2 cut(s) 44, 1049
MluCI AATT 7 cut(s) 71, 191, 683, 930, 1008, 1058, 1082
MluNI TGGCCA 2 cut(s) 44, 1049
MlyI GAGTC 3 cut(s) 85, 555, 557
MmeI TCCRAC 2 cut(s) 113, 1237
Mox20I TGGCCA 2 cut(s) 44, 1049
MroNI GCCGGC 1 cut(s) 331
MscI TGGCCA 2 cut(s) 44, 1049
MseI TTAA 5 cut(s) 839, 927, 981, 1184, 1375
Msp20I TGGCCA 2 cut(s) 44, 1049
MspI CCGG 3 cut(s) 165, 332, 590
MspR9I CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
Mva1269I GAATGC 3 cut(s) 637, 669, 1076
MvaI CCWGG 5 cut(s) 532, 822, 884, 942, 1238
MwoI GCNNNNNNNGC 7 cut(s) 41, 304, 328, 341, 442, 527, 591
NaeI GCCGGC 1 cut(s) 333
NciI CCSGG 1 cut(s) 591
NdeII GATC 1 cut(s) 83
NgoMIV GCCGGC 1 cut(s) 331
NlaIII CATG 4 cut(s) 916, 1312, 1320, 1373
NlaIV GGNNCC 2 cut(s) 181, 785
NmeAIII GCCGAG 2 cut(s) 91, 804
NmuCI GTSAC 2 cut(s) 898, 965
NspI RCATGY 2 cut(s) 1320, 1373
PciI ACATGT 1 cut(s) 1369
PctI GAATGC 3 cut(s) 637, 669, 1076
PdiI GCCGGC 1 cut(s) 333
PfeI GAWTC 3 cut(s) 248, 374, 713
PflFI GACNNNGTC 1 cut(s) 409
PleI GAGTC 3 cut(s) 85, 555, 556
PpsI GAGTC 3 cut(s) 85, 555, 556
PpuMI RGGWCCY 1 cut(s) 818
PscI ACATGT 1 cut(s) 1369
Psp124BI GAGCTC 1 cut(s) 587
Psp1406I AACGTT 1 cut(s) 978
Psp5II RGGWCCY 1 cut(s) 818
Psp6I CCWGG 5 cut(s) 530, 820, 882, 940, 1236
PspFI CCCAGC 2 cut(s) 521, 786
PspGI CCWGG 5 cut(s) 530, 820, 882, 940, 1236
PspN4I GGNNCC 2 cut(s) 181, 785
PspOMI GGGCCC 1 cut(s) 783
PspPI GGNCC 3 cut(s) 783, 784, 818
PspPPI RGGWCCY 1 cut(s) 818
PstNI CAGNNNCTG 1 cut(s) 802
PsyI GACNNNGTC 1 cut(s) 409
RsaI GTAC 2 cut(s) 6, 938
RsaNI GTAC 2 cut(s) 5, 937
SacI GAGCTC 1 cut(s) 587
SaqAI TTAA 5 cut(s) 839, 927, 981, 1184, 1375
Sau3AI GATC 1 cut(s) 83
Sau96I GGNCC 3 cut(s) 783, 784, 818
SchI GAGTC 3 cut(s) 85, 555, 557
ScrFI CCNGG 6 cut(s) 532, 591, 822, 884, 942, 1238
SduI GDGCHC 6 cut(s) 372, 385, 499, 587, 787, 891
SexAI ACCWGGT 1 cut(s) 820
SfaNI GCATC 4 cut(s) 356, 765, 796, 1117
SinI GGWCC 1 cut(s) 818
Sse9I AATT 7 cut(s) 71, 191, 683, 930, 1008, 1058, 1082
SspMI CTAG 3 cut(s) 492, 992, 1271
SstI GAGCTC 1 cut(s) 587
StyD4I CCNGG 6 cut(s) 530, 589, 820, 882, 940, 1236
StyI CCWWGG 1 cut(s) 903
TaaI ACNGT 3 cut(s) 393, 411, 1107
TaiI ACGT 1 cut(s) 981
TaqI TCGA 6 cut(s) 372, 377, 661, 747, 849, 972
TasI AATT 7 cut(s) 71, 191, 683, 930, 1008, 1058, 1082
TauI GCSGC 7 cut(s) 325, 328, 331, 347, 436, 439, 580
TfiI GAWTC 3 cut(s) 248, 374, 713
Tru1I TTAA 5 cut(s) 839, 927, 981, 1184, 1375
Tru9I TTAA 5 cut(s) 839, 927, 981, 1184, 1375
TscAI CASTG 3 cut(s) 238, 504, 970
TseFI GTSAC 2 cut(s) 898, 965
TseI GCWGC 3 cut(s) 298, 674, 740
Tsp45I GTSAC 2 cut(s) 898, 965
TspDTI ATGAA 4 cut(s) 870, 1055, 1095, 1297
TspGWI ACGGA 4 cut(s) 241, 343, 603, 1137
TspRI CASTG 3 cut(s) 238, 504, 970
Tth111I GACNNNGTC 1 cut(s) 409
VneI GTGCAC 1 cut(s) 887
VpaK11BI GGWCC 1 cut(s) 818
XapI RAATTY 2 cut(s) 71, 930
XbaI TCTAGA 2 cut(s) 491, 991
XceI RCATGY 2 cut(s) 1320, 1373
XcmI CCANNNNNNNNNTGG 1 cut(s) 910
XmiI GTMKAC 3 cut(s) 258, 551, 1331
XspI CTAG 3 cut(s) 492, 992, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.