Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010687

Physical Location & Seq

Genomic Coordinates Forward (+)

22480175 .. 22486652

Gene Structure 6478 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023357

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGCATCAAAAGTAGTTCGTTTGATTCAGGATCAGAACCTCAATGTTCACTCTGATGGAGCTTCAGTTGCGGGAAAGGGTGATGCATTCAAATCAACCAAGAAAGGGGGACTTGGTGGAAGGAAACCTCTAGGAGATCTATCAAATAGGGGAAAGCCTGATTTTACCAAGGCATCAAAAAAGCCTGCTCTCACCAATGTTCCTGAAATCATTGCTGATGCAAGCAATAAGAAAGGCCTTTCTAAAGCCTCGGATAAAGTGCAGACTTGTGGCAGCCGCAAGGCACTATCTGATGTGTCTAACACAGTGAATCCACCCCTTCAGAAGACTTCAAGTGCTGTGGCAGAGGAATCCTCTTGTGATTTTGAGAAGGAAGGTTTCCTGCATGATCATAAACAGTGCATCAAAGCAATGAGAGAGGCCACCCACATGGATCAAATGGATATATTTAGGATGATACATGGACCAAATCCATTCAAGATTCTTTCATCTCCACCAAAAGCTTCTCAGTTTACCAAAGTTGAGGAGGAGAGTCTGACAATGTACTTGGAAGAGATACCTGAGGATCAATCCACCTTGCTGCCTGTCAAGCAGGACTCCTCCGTCTCCTCACCTCCTTGCAATTCTCCACCTCTATCACCAGTACGCTATACCGATTCCCCTTGGATTTGGGAGGAGTGTGGTTTTCAGTTCCACAGCCTTTGTGTCGTCTCCTTGTTTCGTCTTGCAAATTCTGTGTCTGTCTCTCTCAACTCGGAAGCTCCAACAGATACACATAGCATTAGAAGAATGGGATTGCCTGATTCTTCTGGAGGTTTGCTGTCTGAATTGGACGTAGATGCTTTCAGACGCCTATTTCCTCTTCGGTTTTATGAGAGCCATCTTGCCAAGTCCACACGCCCTGATGGCAGGTCACTTGACAAAGCTAGAGACACTTCCTCAGCCCTTGGGGCTGTTGCATCTGCCGATGGATCAGCGCTAGTAAAAATTGGTTCGACGACAATGTTGGCTGCTATAAAAATGGAAGTCATGACCCCTTCTCAAGAGTCACCAGATGAGGGATGCATAGCAATTGAATTCCACATGCCTCCAATTTGCTCTCCAATTGTAAGGCCTGGCAGGCCAGCTGAGGCAGCACCTGTTGTGTCAAAACAGCTATCTGACACTATTTTAAGTTCCGGCATGATTAATTTGAAGGAATTATCCTTGGTTAGTGGAAAAGCTGCTTGGATGGTCTACCTGGACATATACTGTTTGGATGCTGATGGTGCTCTATTTGATGCTGCTTTGCTGTCAGCAGTCGCTGCCTTTTCTCACTTGCAGATTCCTGTAGTTTCTATGAATGATGAAGGGAAAGTAGTAGTCATGTCTGAGGAAAATGAGGGAGGAAAGGAGCCAGTCAATAACGAGAAGAGGAAACTCACTTTATGCAGTATTCCATTTTCACTAACATGCATACTTTATAAGAATTACATCTTGGCTGACCCTACAGCAGAGGAAGAGTCGATCATGGAAACTCTTGTAACCGTGGTTTTGGATTCATCTGGTCAACTTGTGTCTCTTTACAAGCCAGGTGGACCAGTTCTTGCCTATACATCAGCTATCCAGGATTGTGTGGCACTCACTAGGCAAAGAGTGGGGGAGCTTCAGACGATTCTAGATGAAGCCACCGCTGGTATGGAGGTTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

RNase_PH RNase_PH_C

Protein Analysis

564

Amino Acids

60.66

Weight (kDa)

5.34

Isoelectric Point (pI)

48.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RNase_PH	PF01138	309 - 443	6.5e-25	3' exoribonuclease family, domain 1
RNase_PH_C	PF03725	479 - 527	7.2e-09	3' exoribonuclease family, domain 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010687)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60080
fragaria_vesca	FvH4_6g23810 FvH4_6g23810 FvH4_6g23810 FvH4_6g23810
malus_domestica	MD12G1073800.v1.1
prunus_persica	Prupe.7G061000_v2.0.a1 Prupe.7G061000_v2.0.a1 Prupe.7G061000_v2.0.a1 Prupe.7G061000_v2.0.a1
pyrus_communis	pycom12g06380
rosa_chinensis	RchiOBHm_Chr3g0482341
rosa_laevigata	RLG00000023357
rosa_roxburghii	Rroxscaffold_6G00399410
rosa_rugosa	Rorug03G0195900
rosa_samantha	Rh3AG247600 Rh3BG282100 Rh3CG279100 Rh3DG274900
rosa_wichuraiana	Rw3G022200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1464
AasI	GACNNNNNNGTC	1 cut(s)	602
Acc36I	ACCTGC	1 cut(s)	900
AccI	GTMKAC	1 cut(s)	1236
AciI	CCGC	3 cut(s)	71, 277, 1671
AclWI	GGATC	4 cut(s)	39, 441, 573, 979
AcsI	RAATTY	2 cut(s)	730, 1076
AcuI	CTGAAG	3 cut(s)	48, 305, 1631
AcyI	GRCGYC	1 cut(s)	850
AfaI	GTAC	2 cut(s)	545, 645
AfeI	AGCGCT	1 cut(s)	978
AfiI	CCNNNNNNNGG	2 cut(s)	105, 1058
AgsI	TTSAA	5 cut(s)	91, 333, 478, 1076, 1195
AjnI	CCWGG	4 cut(s)	1114, 1239, 1570, 1605
AjuI	GAANNNNNNNTTGG	4 cut(s)	1210, 1242, 1460, 1492
AluBI	AGCT	9 cut(s)	62, 503, 761, 926, 1127, 1156, 1223, 1601, 1645
AluI	AGCT	9 cut(s)	62, 503, 761, 926, 1127, 1156, 1223, 1601, 1645
Alw21I	GWGCWC	1 cut(s)	1273
Alw26I	GTCTC	5 cut(s)	610, 715, 748, 924, 1563
AlwI	GGATC	4 cut(s)	39, 441, 573, 979
AlwNI	CAGNNNCTG	2 cut(s)	1139, 1304
Aor51HI	AGCGCT	1 cut(s)	978
AoxI	GGCC	4 cut(s)	235, 420, 1112, 1121
ApeKI	GCWGC	7 cut(s)	273, 580, 1010, 1133, 1223, 1283, 1304
ApoI	RAATTY	2 cut(s)	730, 1076
ArsI	GACNNNNNNTTYG	2 cut(s)	722, 754
AseI	ATTAAT	1 cut(s)	1188
AspLEI	GCGC	1 cut(s)	979
AspS9I	GGNCC	2 cut(s)	464, 1577
AsuHPI	GGTGA	5 cut(s)	92, 184, 603, 630, 1041
AvaII	GGWCC	2 cut(s)	464, 1577
AxyI	CCTNAGG	1 cut(s)	561
BbsI	GAAGAC	1 cut(s)	332
Bbv12I	GWGCWC	1 cut(s)	1273
BbvCI	CCTCAGC	2 cut(s)	940, 1128
BbvI	GCAGC	7 cut(s)	285, 567, 997, 1145, 1210, 1270, 1291
BccI	CCATC	6 cut(s)	50, 888, 899, 962, 1225, 1259
BciT130I	CCWGG	4 cut(s)	1116, 1241, 1572, 1607
BclI	TGATCA	1 cut(s)	388
BcoDI	GTCTC	5 cut(s)	610, 715, 748, 924, 1563
BfaI	CTAG	5 cut(s)	131, 927, 980, 1626, 1658
BfmI	CTRYAG	2 cut(s)	1329, 1488
BfoI	RGCGCY	1 cut(s)	980
BfuAI	ACCTGC	1 cut(s)	900
BglI	GCCNNNNNGGC	3 cut(s)	906, 950, 1120
BglII	AGATCT	1 cut(s)	136
BisI	GCNGC	8 cut(s)	274, 277, 581, 1011, 1134, 1224, 1284, 1305
BlsI	GCNGC	8 cut(s)	275, 278, 582, 1012, 1135, 1225, 1285, 1306
Bme1390I	CCNGG	4 cut(s)	1116, 1241, 1572, 1607
Bme18I	GGWCC	2 cut(s)	464, 1577
BmgT120I	GGNCC	2 cut(s)	464, 1577
BmiI	GGNNCC	1 cut(s)	1395
BmrFI	CCNGG	4 cut(s)	1116, 1241, 1572, 1607
BpiI	GAAGAC	1 cut(s)	332
BplI	GAGNNNNNCTC	2 cut(s)	338, 370
BpmI	CTGGAG	1 cut(s)	831
Bpu10I	CCTNAGC	2 cut(s)	940, 1128
BpuEI	CTTGAG	1 cut(s)	1026
BsaHI	GRCGYC	1 cut(s)	850
BsaJI	CCNNGG	6 cut(s)	168, 249, 662, 946, 1206, 1527
BsaXI	ACNNNNNCTCC	2 cut(s)	51, 81
Bsc4I	CCNNNNNNNGG	2 cut(s)	105, 1058
Bse1I	ACTGG	3 cut(s)	641, 1397, 1580
Bse21I	CCTNAGG	1 cut(s)	561
Bse3DI	GCAATG	2 cut(s)	210, 417
BseBI	CCWGG	4 cut(s)	1116, 1241, 1572, 1607
BseDI	CCNNGG	6 cut(s)	168, 249, 662, 946, 1206, 1527
BseGI	GGATG	4 cut(s)	459, 1067, 1236, 1264
BseLI	CCNNNNNNNGG	2 cut(s)	105, 1058
BseMI	GCAATG	2 cut(s)	210, 417
BseMII	CTCAG	5 cut(s)	521, 552, 954, 1119, 1362
BseNI	ACTGG	3 cut(s)	641, 1397, 1580
BseRI	GAGGAG	5 cut(s)	539, 542, 589, 598, 689
BseXI	GCAGC	7 cut(s)	285, 567, 997, 1145, 1210, 1270, 1291
BsgI	GTGCAG	1 cut(s)	281
BshFI	GGCC	4 cut(s)	237, 422, 1114, 1123
BsiHKAI	GWGCWC	1 cut(s)	1273
BsiSI	CCGG	1 cut(s)	1179
BslFI	GGGAC	1 cut(s)	123
BslI	CCNNNNNNNGG	2 cut(s)	105, 1058
BsmAI	GTCTC	5 cut(s)	610, 715, 748, 924, 1563
BsmBI	CGTCTC	2 cut(s)	610, 715
BsmFI	GGGAC	1 cut(s)	123
BsmI	GAATGC	1 cut(s)	86
BsnI	GGCC	4 cut(s)	237, 422, 1114, 1123
Bsp1286I	GDGCHC	1 cut(s)	1273
Bsp143I	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
BspACI	CCGC	3 cut(s)	71, 277, 1671
BspANI	GGCC	4 cut(s)	237, 422, 1114, 1123
BspCNI	CTCAG	5 cut(s)	520, 553, 953, 1120, 1363
BspHI	TCATGA	1 cut(s)	1029
BspLI	GGNNCC	1 cut(s)	1395
BspMI	ACCTGC	1 cut(s)	900
BspPI	GGATC	4 cut(s)	39, 441, 573, 979
BsrDI	GCAATG	2 cut(s)	210, 417
BsrI	ACTGG	3 cut(s)	641, 1397, 1580
BssECI	CCNNGG	6 cut(s)	168, 249, 662, 946, 1206, 1527
BssMI	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
BssNI	GRCGYC	1 cut(s)	850
BssT1I	CCWWGG	4 cut(s)	168, 662, 946, 1206
Bst2UI	CCWGG	4 cut(s)	1116, 1241, 1572, 1607
Bst4CI	ACNGT	4 cut(s)	307, 399, 1253, 1528
Bst6I	CTCTTC	4 cut(s)	546, 867, 1406, 1494
BstACI	GRCGYC	1 cut(s)	850
BstAPI	GCANNNNNTGC	1 cut(s)	1304
BstC8I	GCNNGC	4 cut(s)	186, 223, 1121, 1125
BstDEI	CTNAG	5 cut(s)	507, 561, 940, 1128, 1371
BstDSI	CCRYGG	1 cut(s)	1527
BstF5I	GGATG	4 cut(s)	459, 1067, 1236, 1264
BstH2I	RGCGCY	1 cut(s)	980
BstHHI	GCGC	1 cut(s)	979
BstKTI	GATC	7 cut(s)	34, 139, 391, 436, 568, 974, 1509
BstMAI	GTCTC	5 cut(s)	610, 715, 748, 924, 1563
BstMBI	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
BstMWI	GCNNNNNNNGC	8 cut(s)	68, 589, 906, 950, 1120, 1133, 1268, 1304
BstNI	CCWGG	4 cut(s)	1116, 1241, 1572, 1607
BstNSI	RCATGY	2 cut(s)	1087, 1455
BstSCI	CCNGG	4 cut(s)	1114, 1239, 1570, 1605
BstSFI	CTRYAG	2 cut(s)	1329, 1488
BstV1I	GCAGC	7 cut(s)	285, 567, 997, 1145, 1210, 1270, 1291
BstV2I	GAAGAC	1 cut(s)	332
BstX2I	RGATCY	1 cut(s)	136
BstXI	CCANNNNNNTGG	1 cut(s)	430
BstYI	RGATCY	1 cut(s)	136
Bsu36I	CCTNAGG	1 cut(s)	561
BsuRI	GGCC	4 cut(s)	237, 422, 1114, 1123
BtgI	CCRYGG	1 cut(s)	1527
BtsCI	GGATG	4 cut(s)	459, 1067, 1236, 1264
BtsIMutI	CAGTG	2 cut(s)	312, 404
BveI	ACCTGC	1 cut(s)	900
Cac8I	GCNNGC	4 cut(s)	186, 223, 1121, 1125
CaiI	CAGNNNCTG	2 cut(s)	1139, 1304
CciI	TCATGA	1 cut(s)	1029
CfoI	GCGC	1 cut(s)	979
Cfr13I	GGNCC	2 cut(s)	464, 1577
CseI	GACGC	1 cut(s)	858
Csp6I	GTAC	2 cut(s)	544, 644
CspCI	CAANNNNNGTGG	6 cut(s)	321, 356, 683, 718, 1555, 1590
CviAII	CATG	9 cut(s)	386, 430, 461, 1030, 1084, 1183, 1366, 1452, 1510
CviQI	GTAC	2 cut(s)	544, 644
DdeI	CTNAG	5 cut(s)	507, 561, 940, 1128, 1371
DpnI	GATC	7 cut(s)	33, 138, 390, 435, 567, 973, 1508
DpnII	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
DrdI	GACNNNNNNGTC	1 cut(s)	602
DseDI	GACNNNNNNGTC	1 cut(s)	602
Eam1104I	CTCTTC	4 cut(s)	546, 867, 1406, 1494
EarI	CTCTTC	4 cut(s)	546, 867, 1406, 1494
Eco130I	CCWWGG	4 cut(s)	168, 662, 946, 1206
Eco147I	AGGCCT	2 cut(s)	237, 1114
Eco47I	GGWCC	2 cut(s)	464, 1577
Eco47III	AGCGCT	1 cut(s)	978
Eco57I	CTGAAG	3 cut(s)	48, 305, 1631
Eco81I	CCTNAGG	1 cut(s)	561
EcoRI	GAATTC	1 cut(s)	1076
EcoRII	CCWGG	4 cut(s)	1114, 1239, 1570, 1605
EcoT14I	CCWWGG	4 cut(s)	168, 662, 946, 1206
EcoT22I	ATGCAT	3 cut(s)	88, 1067, 1457
ErhI	CCWWGG	4 cut(s)	168, 662, 946, 1206
Esp3I	CGTCTC	2 cut(s)	610, 715
FaeI	CATG	9 cut(s)	389, 433, 464, 1033, 1087, 1186, 1369, 1455, 1513
FalI	AAGNNNNNCTT	2 cut(s)	96, 128
FaqI	GGGAC	1 cut(s)	123
FatI	CATG	9 cut(s)	385, 429, 460, 1029, 1083, 1182, 1365, 1451, 1509
FauI	CCCGC	1 cut(s)	64
FbaI	TGATCA	1 cut(s)	388
FblI	GTMKAC	1 cut(s)	1236
Fnu4HI	GCNGC	8 cut(s)	274, 277, 581, 1011, 1134, 1224, 1284, 1305
FokI	GGATG	4 cut(s)	466, 1074, 1243, 1271
Fsp4HI	GCNGC	8 cut(s)	274, 277, 581, 1011, 1134, 1224, 1284, 1305
FspBI	CTAG	5 cut(s)	131, 927, 980, 1626, 1658
GlaI	GCGC	1 cut(s)	978
GluI	GCNGC	8 cut(s)	274, 277, 581, 1011, 1134, 1224, 1284, 1305
GsuI	CTGGAG	1 cut(s)	831
HaeII	RGCGCY	1 cut(s)	980
HaeIII	GGCC	4 cut(s)	237, 422, 1114, 1123
HapII	CCGG	1 cut(s)	1179
HgaI	GACGC	1 cut(s)	858
HhaI	GCGC	1 cut(s)	979
Hin1I	GRCGYC	1 cut(s)	850
Hin1II	CATG	9 cut(s)	389, 433, 464, 1033, 1087, 1186, 1369, 1455, 1513
Hin6I	GCGC	1 cut(s)	977
HinP1I	GCGC	1 cut(s)	977
HincII	GTYRAC	1 cut(s)	1550
HindII	GTYRAC	1 cut(s)	1550
HindIII	AAGCTT	1 cut(s)	501
HpaII	CCGG	1 cut(s)	1179
HphI	GGTGA	5 cut(s)	92, 184, 603, 630, 1041
Hpy166II	GTNNAC	6 cut(s)	49, 513, 894, 1237, 1550, 1577
Hpy188III	TCNNGA	7 cut(s)	29, 203, 478, 810, 1030, 1043, 1658
Hpy8I	GTNNAC	6 cut(s)	49, 513, 894, 1237, 1550, 1577
Hpy99I	CGWCG	1 cut(s)	1000
HpyAV	CCTTC	7 cut(s)	114, 329, 364, 368, 1047, 1189, 1343
HpyCH4III	ACNGT	4 cut(s)	307, 399, 1253, 1528
HpyCH4IV	ACGT	1 cut(s)	834
HpyF10VI	GCNNNNNNNGC	8 cut(s)	68, 589, 906, 950, 1120, 1133, 1268, 1304
HpyF3I	CTNAG	5 cut(s)	507, 561, 940, 1128, 1371
HpySE526I	ACGT	1 cut(s)	834
Hsp92I	GRCGYC	1 cut(s)	850
Hsp92II	CATG	9 cut(s)	389, 433, 464, 1033, 1087, 1186, 1369, 1455, 1513
HspAI	GCGC	1 cut(s)	977
Ksp22I	TGATCA	1 cut(s)	388
Kzo9I	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
LmnI	GCTCC	4 cut(s)	59, 766, 1393, 1642
Lsp1109I	GCAGC	7 cut(s)	285, 567, 997, 1145, 1210, 1270, 1291
MaeI	CTAG	5 cut(s)	131, 927, 980, 1626, 1658
MaeII	ACGT	1 cut(s)	834
MaeIII	GTNAC	3 cut(s)	912, 1047, 1522
MalI	GATC	7 cut(s)	33, 138, 390, 435, 567, 973, 1508
MboI	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
MboII	GAAGA	7 cut(s)	337, 563, 798, 798, 854, 1423, 1511
MfeI	CAATTG	2 cut(s)	1071, 1104
MflI	RGATCY	1 cut(s)	136
MhlI	GDGCHC	1 cut(s)	1273
MlyI	GAGTC	4 cut(s)	541, 590, 1055, 1511
MmeI	TCCRAC	1 cut(s)	788
Mph1103I	ATGCAT	3 cut(s)	88, 1067, 1457
MseI	TTAA	2 cut(s)	1172, 1188
MslI	CAYNNNNRTG	3 cut(s)	54, 428, 1450
MspA1I	CMGCKG	2 cut(s)	1127, 1673
MspI	CCGG	1 cut(s)	1179
MspR9I	CCNGG	4 cut(s)	1116, 1241, 1572, 1607
MunI	CAATTG	2 cut(s)	1071, 1104
Mva1269I	GAATGC	1 cut(s)	86
MvaI	CCWGG	4 cut(s)	1116, 1241, 1572, 1607
MwoI	GCNNNNNNNGC	8 cut(s)	68, 589, 906, 950, 1120, 1133, 1268, 1304
NdeII	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
NlaIII	CATG	9 cut(s)	389, 433, 464, 1033, 1087, 1186, 1369, 1455, 1513
NlaIV	GGNNCC	1 cut(s)	1395
NmuCI	GTSAC	2 cut(s)	912, 1047
NsiI	ATGCAT	3 cut(s)	88, 1067, 1457
NspI	RCATGY	2 cut(s)	1087, 1455
PagI	TCATGA	1 cut(s)	1029
PceI	AGGCCT	2 cut(s)	237, 1114
PctI	GAATGC	1 cut(s)	86
PfeI	GAWTC	9 cut(s)	25, 310, 350, 481, 656, 803, 1324, 1538, 1654
PfoI	TCCNGGA	1 cut(s)	1605
PkrI	GCNGC	8 cut(s)	275, 278, 582, 1012, 1135, 1225, 1285, 1306
PleI	GAGTC	4 cut(s)	540, 590, 1054, 1510
PpsI	GAGTC	4 cut(s)	540, 590, 1054, 1510
PshBI	ATTAAT	1 cut(s)	1188
PsiI	TTATAA	1 cut(s)	1464
Psp6I	CCWGG	4 cut(s)	1114, 1239, 1570, 1605
PspGI	CCWGG	4 cut(s)	1114, 1239, 1570, 1605
PspN4I	GGNNCC	1 cut(s)	1395
PspPI	GGNCC	2 cut(s)	464, 1577
PstNI	CAGNNNCTG	2 cut(s)	1139, 1304
PsuI	RGATCY	1 cut(s)	136
PvuII	CAGCTG	1 cut(s)	1127
RsaI	GTAC	2 cut(s)	545, 645
RsaNI	GTAC	2 cut(s)	544, 644
RseI	CAYNNNNRTG	3 cut(s)	54, 428, 1450
SaqAI	TTAA	2 cut(s)	1172, 1188
SatI	GCNGC	8 cut(s)	274, 277, 581, 1011, 1134, 1224, 1284, 1305
Sau3AI	GATC	7 cut(s)	31, 136, 388, 433, 565, 971, 1506
Sau96I	GGNCC	2 cut(s)	464, 1577
SchI	GAGTC	4 cut(s)	541, 590, 1055, 1511
ScrFI	CCNGG	4 cut(s)	1116, 1241, 1572, 1607
SduI	GDGCHC	1 cut(s)	1273
SfcI	CTRYAG	2 cut(s)	1329, 1488
SfiI	GGCCNNNNNGGCC	1 cut(s)	1120
SinI	GGWCC	2 cut(s)	464, 1577
SmiMI	CAYNNNNRTG	3 cut(s)	54, 428, 1450
SmlI	CTYRAG	1 cut(s)	1041
SmoI	CTYRAG	1 cut(s)	1041
SseBI	AGGCCT	2 cut(s)	237, 1114
SsiI	CCGC	3 cut(s)	71, 277, 1671
SspMI	CTAG	5 cut(s)	131, 927, 980, 1626, 1658
StuI	AGGCCT	2 cut(s)	237, 1114
StyD4I	CCNGG	4 cut(s)	1114, 1239, 1570, 1605
StyI	CCWWGG	4 cut(s)	168, 662, 946, 1206
TaaI	ACNGT	4 cut(s)	307, 399, 1253, 1528
TaiI	ACGT	1 cut(s)	837
TaqI	TCGA	2 cut(s)	995, 1505
TatI	WGTACW	1 cut(s)	543
TauI	GCSGC	1 cut(s)	279
TfiI	GAWTC	9 cut(s)	25, 310, 350, 481, 656, 803, 1324, 1538, 1654
Tru1I	TTAA	2 cut(s)	1172, 1188
Tru9I	TTAA	2 cut(s)	1172, 1188
TscAI	CASTG	2 cut(s)	312, 404
TseFI	GTSAC	2 cut(s)	912, 1047
TseI	GCWGC	7 cut(s)	273, 580, 1010, 1133, 1223, 1283, 1304
Tsp45I	GTSAC	2 cut(s)	912, 1047
TspDTI	ATGAA	5 cut(s)	477, 1355, 1362, 1530, 1677
TspGWI	ACGGA	1 cut(s)	592
TspRI	CASTG	2 cut(s)	312, 404
VpaK11BI	GGWCC	2 cut(s)	464, 1577
VspI	ATTAAT	1 cut(s)	1188
XapI	RAATTY	2 cut(s)	730, 1076
XbaI	TCTAGA	1 cut(s)	1657
XceI	RCATGY	2 cut(s)	1087, 1455
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1675
XmiI	GTMKAC	1 cut(s)	1236
XspI	CTAG	5 cut(s)	131, 927, 980, 1626, 1658
Zsp2I	ATGCAT	3 cut(s)	88, 1067, 1457

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.