RLG00000023417

UDP-glycosyltransferase 90A1-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
23352844 .. 23354256
1413 bp
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UTR
Exon/CDS
Intron
RLM00000023417

Sequence Viewer

Length: 1413 bp
ATGGCTGCTTCATCCTCACCTCCCCATGTAGTAATCTTCCCATTCATGGCTCAAGGCCACACTCTTCCATTGCTAGACATATCCAAGGCATTATCATTCTGTGGCCTCAAAGTAACCATCATCACCACCCCATTAAACGCACCGTTCATCCATTCCAAAGTCTCAGACCACATCTCATCAATCTCAGTCTCAGTCATCCCATTTCCAATTGTTCCAGACTTGCCACAAGGCTGTGAAAACACTGCTAATCTTCCTTCGGTTTCGCTAGACATATTAGCTTCCTTCATCACAGCCACCAAAAACATGAAGCAGCATTTTGAAGCTCTTCTTAAGGAGATGGTCGAAACTGGTTCCCGCCGAATTTGTGTAATCTCTGACTTCTTCCTCTATTGGACTCTCGACACATGTCGCTCTTTTAACATTCCTAGGGTTGTGTCTCATGGAATGGGGGTGTTACCCATGTTGATTCTCAAGCATAATTCCGACCCATGCAAAACGTCGTCTGAGTTTGACGTCATAGAGTTACCAAGTTTGACACTTCCATTCACATTGAACGGGTCAGACCTGCCCGTTTGTGACCCTGATGACCCGTTTACCAGGGTCATATTAGAGGTTGAGGAAGCAGACAAGAACAGCTGGGGTGTGATTGTGACTAGCTTTCAAGAGCTTGAAGGTGAGTACGTGACCGCATTGGAAGGTTTGTACTACAAAGAGGCCAGGGCATGGTGTGTGGGGCCAGTTTTGCTCTACGATTATATTCAAGAGCAATCTAGAGCGTCCGATGGTAAGAGTCAATCCTGCGGTCCGTACATCGAGTGGCTGGATAAGCAAGAGGGATCCAGTGTGGTGATCTACGTGTCGTTTGGTACGCAAGCGCGATTGTCCAAGGAACAGATGGACGAGATTGCTTATGGACTAGAGATGGCGGGGCAACGCTTCATTTGGGTTGTCGGATCATCAGGGATGTGGGTTCCAGATGAAGGATGGGTGAGAAGGGTGGAAGGGAGAGGGTTGGTTGTACGTGATTGGGTAGACCAGCGGAGTGTCCTAGCGCATCCGAAGGCGGGCGGGTTTGTGAGTCATTGTGGGTGGAACTCAGTGTTGGAGAGCTTGTCAATGGGGGTGCCACTATTAGCTTGGCCAATCGGAGCGGAGCAACCGCTGAATGCCAAGTTCGTTGCAATGGGGCTCAAAGCAGGGTTGATGGTTTCAGAAGAAAGGGTCAAGACTATTGATAGGCAAGTGATATGTGAAGGAGTGAAGGAGTTGATGGAAGGTGAGAAAGGGAGGAGTGCTAGGGAAAGGGCAAGAGAATTGGGGGCAATGGCTTGGAGTGCTGTCAAGAAAGGTGGTTCGTCTGATGGAAAATTGGATGAATTGATCAATCAACTCATTGACATCAAGAGGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

471

Amino Acids

51.84

Weight (kDa)

5.23

Isoelectric Point (pI)

38.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 10 - 247 2e-09 Glycosyltransferase, N-terminal domain
UDPGT PF00201 277 - 425 6.6e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 516
Acc36I ACCTGC 1 cut(s) 573
AccB1I GGYRCC 1 cut(s) 1123
AccB7I CCANNNNNTGG 1 cut(s) 723
AccBSI CCGCTC 1 cut(s) 1151
AccI GTMKAC 1 cut(s) 1032
AccII CGCG 1 cut(s) 877
AciI CCGC 9 cut(s) 355, 687, 801, 926, 1039, 1064, 1068, 1151, 1160
AclWI GGATC 3 cut(s) 831, 844, 961
AcoI YGGCCR 1 cut(s) 1139
AcsI RAATTY 1 cut(s) 360
AcyI GRCGYC 1 cut(s) 513
AfaI GTAC 5 cut(s) 680, 704, 809, 868, 1020
AfiI CCNNNNNNNGG 4 cut(s) 46, 723, 980, 1064
AflII CTTAAG 1 cut(s) 329
AflIII ACRYGT 2 cut(s) 404, 855
AgsI TTSAA 5 cut(s) 320, 553, 662, 671, 761
AjnI CCWGG 2 cut(s) 596, 716
AjuI GAANNNNNNNTTGG 2 cut(s) 1085, 1117
AluBI AGCT 7 cut(s) 278, 323, 636, 657, 667, 1110, 1136
AluI AGCT 7 cut(s) 278, 323, 636, 657, 667, 1110, 1136
Alw26I GTCTC 3 cut(s) 166, 193, 441
AlwI GGATC 3 cut(s) 831, 844, 961
AoxI GGCC 5 cut(s) 55, 103, 714, 734, 1139
ApeKI GCWGC 2 cut(s) 5, 310
ApoI RAATTY 1 cut(s) 360
Asp700I GAANNNNTTC 1 cut(s) 324
AspA2I CCTAGG 1 cut(s) 425
AspLEI GCGC 2 cut(s) 877, 1054
AspS9I GGNCC 2 cut(s) 734, 803
AsuHPI GGTGA 6 cut(s) 9, 115, 686, 859, 1000, 1289
AvaII GGWCC 1 cut(s) 803
AvrII CCTAGG 1 cut(s) 425
BalI TGGCCA 1 cut(s) 1141
BamHI GGATCC 1 cut(s) 836
BanI GGYRCC 1 cut(s) 1123
BanII GRGCYC 1 cut(s) 1191
BbvI GCAGC 1 cut(s) 322
BccI CCATC 9 cut(s) 125, 331, 776, 889, 916, 978, 1198, 1264, 1355
BciT130I CCWGG 2 cut(s) 598, 718
BclI TGATCA 1 cut(s) 1380
BcoDI GTCTC 3 cut(s) 166, 193, 441
BfaI CTAG 8 cut(s) 74, 266, 426, 654, 771, 917, 1049, 1296
BfrI CTTAAG 1 cut(s) 329
BfuAI ACCTGC 1 cut(s) 573
BisI GCNGC 2 cut(s) 6, 311
BlnI CCTAGG 1 cut(s) 425
BlsI GCNGC 2 cut(s) 7, 312
Bme1390I CCNGG 2 cut(s) 598, 718
Bme18I GGWCC 1 cut(s) 803
BmgT120I GGNCC 2 cut(s) 734, 803
BmiI GGNNCC 5 cut(s) 352, 735, 838, 972, 1125
BmrFI CCNGG 2 cut(s) 598, 718
BmsI GCATC 1 cut(s) 1063
BoxI GACNNNNGTC 1 cut(s) 405
BpuEI CTTGAG 2 cut(s) 36, 455
BsaAI YACGTR 3 cut(s) 682, 856, 1022
BsaHI GRCGYC 1 cut(s) 513
BsaJI CCNNGG 5 cut(s) 84, 425, 597, 717, 885
BsaXI ACNNNNNCTCC 2 cut(s) 1097, 1127
Bsc4I CCNNNNNNNGG 4 cut(s) 46, 723, 980, 1064
Bse1I ACTGG 3 cut(s) 352, 737, 840
Bse3DI GCAATG 3 cut(s) 68, 1188, 1329
BseBI CCWGG 2 cut(s) 598, 718
BseDI CCNNGG 5 cut(s) 84, 425, 597, 717, 885
BseGI GGATG 7 cut(s) 11, 147, 195, 969, 989, 1054, 1378
BseLI CCNNNNNNNGG 4 cut(s) 46, 723, 980, 1064
BseMI GCAATG 3 cut(s) 68, 1188, 1329
BseMII CTCAG 5 cut(s) 177, 198, 204, 495, 1110
BseNI ACTGG 3 cut(s) 352, 737, 840
BseRI GAGGAG 1 cut(s) 1303
BseXI GCAGC 1 cut(s) 322
BseYI CCCAGC 1 cut(s) 636
Bsh1236I CGCG 1 cut(s) 877
BshFI GGCC 5 cut(s) 57, 105, 716, 736, 1141
BshNI GGYRCC 1 cut(s) 1123
BslI CCNNNNNNNGG 4 cut(s) 46, 723, 980, 1064
BsmAI GTCTC 3 cut(s) 166, 193, 441
BsmI GAATGC 1 cut(s) 1171
BsnI GGCC 5 cut(s) 57, 105, 716, 736, 1141
Bsp1286I GDGCHC 1 cut(s) 1191
Bsp143I GATC 4 cut(s) 836, 849, 953, 1380
BspACI CCGC 9 cut(s) 355, 687, 801, 926, 1039, 1064, 1068, 1151, 1160
BspANI GGCC 5 cut(s) 57, 105, 716, 736, 1141
BspCNI CTCAG 5 cut(s) 176, 197, 203, 496, 1109
BspFNI CGCG 1 cut(s) 877
BspLI GGNNCC 5 cut(s) 352, 735, 838, 972, 1125
BspMI ACCTGC 1 cut(s) 573
BspPI GGATC 3 cut(s) 831, 844, 961
BspQI GCTCTTC 1 cut(s) 330
BspT107I GGYRCC 1 cut(s) 1123
BspTI CTTAAG 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 1151
BsrDI GCAATG 3 cut(s) 68, 1188, 1329
BsrI ACTGG 3 cut(s) 352, 737, 840
BssECI CCNNGG 5 cut(s) 84, 425, 597, 717, 885
BssMI GATC 4 cut(s) 836, 849, 953, 1380
BssNI GRCGYC 1 cut(s) 513
BssT1I CCWWGG 3 cut(s) 84, 425, 885
Bst2UI CCWGG 2 cut(s) 598, 718
Bst4CI ACNGT 1 cut(s) 144
Bst6I CTCTTC 2 cut(s) 69, 330
BstACI GRCGYC 1 cut(s) 513
BstAFI CTTAAG 1 cut(s) 329
BstBAI YACGTR 3 cut(s) 682, 856, 1022
BstC8I GCNNGC 2 cut(s) 873, 1066
BstDEI CTNAG 5 cut(s) 163, 184, 190, 504, 1096
BstF5I GGATG 7 cut(s) 11, 147, 195, 969, 989, 1054, 1378
BstFNI CGCG 1 cut(s) 877
BstHHI GCGC 2 cut(s) 877, 1054
BstKTI GATC 4 cut(s) 839, 852, 956, 1383
BstMAI GTCTC 3 cut(s) 166, 193, 441
BstMBI GATC 4 cut(s) 836, 849, 953, 1380
BstMWI GCNNNNNNNGC 3 cut(s) 742, 826, 1334
BstNI CCWGG 2 cut(s) 598, 718
BstNSI RCATGY 1 cut(s) 408
BstPAI GACNNNNGTC 1 cut(s) 405
BstSCI CCNGG 2 cut(s) 596, 716
BstUI CGCG 1 cut(s) 877
BstV1I GCAGC 1 cut(s) 322
BstX2I RGATCY 1 cut(s) 836
BstYI RGATCY 1 cut(s) 836
BsuRI GGCC 5 cut(s) 57, 105, 716, 736, 1141
BtsCI GGATG 7 cut(s) 11, 147, 195, 969, 989, 1054, 1378
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 3 cut(s) 240, 847, 1104
BveI ACCTGC 1 cut(s) 573
Cac8I GCNNGC 2 cut(s) 873, 1066
CfoI GCGC 2 cut(s) 877, 1054
Cfr13I GGNCC 2 cut(s) 734, 803
CpoI CGGWCCG 1 cut(s) 803
CseI GACGC 1 cut(s) 765
Csp6I GTAC 5 cut(s) 679, 703, 808, 867, 1019
CspCI CAANNNNNGTGG 2 cut(s) 1330, 1365
CspI CGGWCCG 1 cut(s) 803
CviAII CATG 8 cut(s) 26, 46, 304, 405, 440, 460, 489, 723
CviQI GTAC 5 cut(s) 679, 703, 808, 867, 1019
DdeI CTNAG 5 cut(s) 163, 184, 190, 504, 1096
DpnI GATC 4 cut(s) 838, 851, 955, 1382
DpnII GATC 4 cut(s) 836, 849, 953, 1380
EaeI YGGCCR 1 cut(s) 1139
Eam1104I CTCTTC 2 cut(s) 69, 330
EarI CTCTTC 2 cut(s) 69, 330
Eco130I CCWWGG 3 cut(s) 84, 425, 885
Eco24I GRGCYC 1 cut(s) 1191
Eco47I GGWCC 1 cut(s) 803
EcoRII CCWGG 2 cut(s) 596, 716
EcoT14I CCWWGG 3 cut(s) 84, 425, 885
EcoT38I GRGCYC 1 cut(s) 1191
ErhI CCWWGG 3 cut(s) 84, 425, 885
FaeI CATG 8 cut(s) 29, 49, 307, 408, 443, 463, 492, 726
FalI AAGNNNNNCTT 2 cut(s) 312, 344
FatI CATG 8 cut(s) 25, 45, 303, 404, 439, 459, 488, 722
FauI CCCGC 4 cut(s) 362, 919, 1057, 1061
FbaI TGATCA 1 cut(s) 1380
FblI GTMKAC 1 cut(s) 1032
Fnu4HI GCNGC 2 cut(s) 6, 311
FokI GGATG 6 cut(s) 134, 182, 976, 996, 1041, 1385
FriOI GRGCYC 1 cut(s) 1191
Fsp4HI GCNGC 2 cut(s) 6, 311
FspBI CTAG 8 cut(s) 74, 266, 426, 654, 771, 917, 1049, 1296
GlaI GCGC 2 cut(s) 876, 1053
GluI GCNGC 2 cut(s) 6, 311
GsaI CCCAGC 1 cut(s) 640
HaeIII GGCC 5 cut(s) 57, 105, 716, 736, 1141
HgaI GACGC 1 cut(s) 765
HhaI GCGC 2 cut(s) 877, 1054
Hin1I GRCGYC 1 cut(s) 513
Hin1II CATG 8 cut(s) 29, 49, 307, 408, 443, 463, 492, 726
Hin6I GCGC 2 cut(s) 875, 1052
HinP1I GCGC 2 cut(s) 875, 1052
HinfI GANTC 4 cut(s) 394, 466, 790, 1078
HphI GGTGA 6 cut(s) 9, 115, 686, 859, 1000, 1289
Hpy166II GTNNAC 2 cut(s) 594, 1033
Hpy188III TCNNGA 9 cut(s) 215, 398, 662, 761, 771, 974, 1225, 1342, 1402
Hpy8I GTNNAC 2 cut(s) 594, 1033
Hpy99I CGWCG 1 cut(s) 502
HpyCH4III ACNGT 1 cut(s) 144
HpyCH4IV ACGT 5 cut(s) 497, 513, 681, 855, 1021
HpyCH4V TGCA 2 cut(s) 492, 1181
HpyF10VI GCNNNNNNNGC 3 cut(s) 742, 826, 1334
HpyF3I CTNAG 5 cut(s) 163, 184, 190, 504, 1096
HpySE526I ACGT 5 cut(s) 497, 513, 681, 855, 1021
Hsp92I GRCGYC 1 cut(s) 513
Hsp92II CATG 8 cut(s) 29, 49, 307, 408, 443, 463, 492, 726
HspAI GCGC 2 cut(s) 875, 1052
Ksp22I TGATCA 1 cut(s) 1380
Kzo9I GATC 4 cut(s) 836, 849, 953, 1380
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 2 cut(s) 1148, 1153
Lsp1109I GCAGC 1 cut(s) 322
LweI GCATC 1 cut(s) 1063
MaeI CTAG 8 cut(s) 74, 266, 426, 654, 771, 917, 1049, 1296
MaeII ACGT 5 cut(s) 497, 513, 681, 855, 1021
MaeIII GTNAC 6 cut(s) 112, 453, 522, 575, 649, 682
MalI GATC 4 cut(s) 838, 851, 955, 1382
MbiI CCGCTC 1 cut(s) 1151
MboI GATC 4 cut(s) 836, 849, 953, 1380
MboII GAAGA 6 cut(s) 28, 56, 242, 317, 373, 1226
MfeI CAATTG 1 cut(s) 207
MflI RGATCY 1 cut(s) 836
MhlI GDGCHC 1 cut(s) 1191
MlsI TGGCCA 1 cut(s) 1141
MluCI AATT 6 cut(s) 207, 360, 478, 1313, 1367, 1376
MluNI TGGCCA 1 cut(s) 1141
MlyI GAGTC 3 cut(s) 388, 799, 1087
MmeI TCCRAC 3 cut(s) 507, 931, 1083
Mox20I TGGCCA 1 cut(s) 1141
MroXI GAANNNNTTC 1 cut(s) 324
MscI TGGCCA 1 cut(s) 1141
MseI TTAA 4 cut(s) 134, 330, 417, 1411
Msp20I TGGCCA 1 cut(s) 1141
MspA1I CMGCKG 3 cut(s) 636, 1039, 1162
MspCI CTTAAG 1 cut(s) 329
MspR9I CCNGG 2 cut(s) 598, 718
MunI CAATTG 1 cut(s) 207
Mva1269I GAATGC 1 cut(s) 1171
MvaI CCWGG 2 cut(s) 598, 718
MvnI CGCG 1 cut(s) 877
MwoI GCNNNNNNNGC 3 cut(s) 742, 826, 1334
NdeII GATC 4 cut(s) 836, 849, 953, 1380
NlaIII CATG 8 cut(s) 29, 49, 307, 408, 443, 463, 492, 726
NlaIV GGNNCC 5 cut(s) 352, 735, 838, 972, 1125
NmuCI GTSAC 3 cut(s) 575, 649, 682
NspI RCATGY 1 cut(s) 408
PciI ACATGT 1 cut(s) 404
PciSI GCTCTTC 1 cut(s) 330
PctI GAATGC 1 cut(s) 1171
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 1 cut(s) 466
PflMI CCANNNNNTGG 1 cut(s) 723
PkrI GCNGC 2 cut(s) 7, 312
PleI GAGTC 3 cut(s) 388, 798, 1086
PpsI GAGTC 3 cut(s) 388, 798, 1086
Ppu21I YACGTR 3 cut(s) 682, 856, 1022
PscI ACATGT 1 cut(s) 404
PshAI GACNNNNGTC 1 cut(s) 405
Psp6I CCWGG 2 cut(s) 596, 716
PspFI CCCAGC 1 cut(s) 636
PspGI CCWGG 2 cut(s) 596, 716
PspN4I GGNNCC 5 cut(s) 352, 735, 838, 972, 1125
PspPI GGNCC 2 cut(s) 734, 803
PsuI RGATCY 1 cut(s) 836
PvuII CAGCTG 1 cut(s) 636
RsaI GTAC 5 cut(s) 680, 704, 809, 868, 1020
RsaNI GTAC 5 cut(s) 679, 703, 808, 867, 1019
Rsr2I CGGWCCG 1 cut(s) 803
RsrII CGGWCCG 1 cut(s) 803
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 4 cut(s) 134, 330, 417, 1411
SatI GCNGC 2 cut(s) 6, 311
Sau3AI GATC 4 cut(s) 836, 849, 953, 1380
Sau96I GGNCC 2 cut(s) 734, 803
SchI GAGTC 3 cut(s) 388, 799, 1087
ScrFI CCNGG 2 cut(s) 598, 718
SduI GDGCHC 1 cut(s) 1191
SfaNI GCATC 1 cut(s) 1063
SinI GGWCC 1 cut(s) 803
SmlI CTYRAG 3 cut(s) 51, 329, 470
SmoI CTYRAG 3 cut(s) 51, 329, 470
Sse9I AATT 6 cut(s) 207, 360, 478, 1313, 1367, 1376
SsiI CCGC 9 cut(s) 355, 687, 801, 926, 1039, 1064, 1068, 1151, 1160
SspMI CTAG 8 cut(s) 74, 266, 426, 654, 771, 917, 1049, 1296
StyD4I CCNGG 2 cut(s) 596, 716
StyI CCWWGG 3 cut(s) 84, 425, 885
TaaI ACNGT 1 cut(s) 144
TaiI ACGT 5 cut(s) 500, 516, 684, 858, 1024
TaqI TCGA 3 cut(s) 342, 399, 813
TasI AATT 6 cut(s) 207, 360, 478, 1313, 1367, 1376
TatI WGTACW 1 cut(s) 702
TfiI GAWTC 1 cut(s) 466
Tru1I TTAA 4 cut(s) 134, 330, 417, 1411
Tru9I TTAA 4 cut(s) 134, 330, 417, 1411
TscAI CASTG 3 cut(s) 247, 847, 1104
TseFI GTSAC 3 cut(s) 575, 649, 682
TseI GCWGC 2 cut(s) 5, 310
Tsp45I GTSAC 3 cut(s) 575, 649, 682
TspDTI ATGAA 7 cut(s) 34, 136, 274, 320, 928, 993, 1389
TspGWI ACGGA 1 cut(s) 795
TspRI CASTG 3 cut(s) 247, 847, 1104
Van91I CCANNNNNTGG 1 cut(s) 723
Vha464I CTTAAG 1 cut(s) 329
VpaK11BI GGWCC 1 cut(s) 803
XapI RAATTY 1 cut(s) 360
XbaI TCTAGA 1 cut(s) 770
XceI RCATGY 1 cut(s) 408
XcmI CCANNNNNNNNNTGG 3 cut(s) 892, 981, 1134
XmaJI CCTAGG 1 cut(s) 425
XmiI GTMKAC 1 cut(s) 1032
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 8 cut(s) 74, 266, 426, 654, 771, 917, 1049, 1296
ZraI GACGTC 1 cut(s) 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.