Rh2BG489900

UDP-glycosyltransferase 90A1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0015713
Physical Location & Seq
Forward (+)
68960070 .. 68961584
1515 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG489900.1

Sequence Viewer

Length: 1419 bp
ATGGCTGCTTCATCCTCACCTCCCCATGTAGTAATCTTCCCATTCACGGCTCAAGGTCACACTCTTCCATTGCTAGACATATCCAAGGCATTATCATTCCGTGGCCTCAAAGTAACCATCATCACGACCCCATTAAACGCACCGTTCATCCACTCCAAAGTCTCAGACCACATCTCATCAATCTCAGTCTCAGTCTCAGTCATCCCATTTCCAATTGTTCCAGACTTGCCCCAAGGCTGTGAAAACACTGCTAATCTTCCTTCGGTTTCGCTAGACATATTAGCTTCCTTCATCACAGCCACCAAAAACATGAAGCAGCATTTTGAAGCTCTTCTTAAGGAGATGGTCGAAACTGGTTCCCGCCCAATTTGTGTAATCTCCGACTTCTTCCTCTATTGGACTCTCGACACGTGTCGCACTTTTGGCATTCCTAGGGTTGTGTCTCATGGAATGGGGGTGTTACCCATGTTGATTCTCAAGCATAATTCCGACATATGCAAAACGTCGTCTGAGTTTGACGTTATAGAGTTACCGAGTTTGACACTTCCATTCACATTGAACGGGTCAGACCTGCCCGTTTGTGACCCTGATGACCCCTTTACCAGGGTCATATTAGAGGTTGAGGAAGCAGACAAGAACAGCTGGGGTGTGATTGTGAATAGCTTTCAAGAGCTTGAAGGTGAGTACGTGACCGCATTGGAAGGTTTGTACTACAAAGAGGCCAGGGCATGGTGTGTGGGGCCAGTTTTGCTCTACGATTATATTCAAGAGCAATCTAGAGCGTCCGATGGTAAGAGTCAATCCTGCGGTCCGTACATCGAGTGGCTGGATAAGCAAGAGGGATCCAGTGTGGTGATCTACGTGTCATTCGGTACACAAGCGCGATTGTCCAACGAACAGATGGACGAGATTGCTTATGGACTAGAGATGGCGAGGCAACGCTTCATTTGGGTCGTTGGATCATTAGGGATGTGGGTTCCAGATGAAGGATGGGTGAGAAGGGTGGAAGGGAGAGGGTTGGTTGTACGTGATTGGGTAGACCAGCGGAGTATCCTAGCGCACCCTAAGGTGGGCGGGTTTGTGAGTCATTGTGGGTGGAACTCGGTGTTGGAGAGCTTGTCAATGGGGGTGCCACTATTAGCTTGGCCACTCGGAGCGGAGCAACCATTGAATGCCAAGTTCGTTGCAATGGGGCTCAAAGCAGGATTGATGGTTTCAGAAGAGCAGGTCAAGACTATTGATAGGCAAGTGATATGTGAAGGAGTGAAGGAGTTGATGGAAGGTAAGAAAGGGAGGAGTACTAGGGAAAGGGCAAGAGAATTGGGGACAATGGCTTGGAATGCTGTCAAGAAAGGTGGTTCGTCTGATGGAAAATTGGATGAATTGATCAATCGACTCATTGACATCAAGAGGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

472

Amino Acids

52.22

Weight (kDa)

5.36

Isoelectric Point (pI)

36.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 10 - 249 3.9e-10 Glycosyltransferase, N-terminal domain
UDPGT PF00201 279 - 429 3.6e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 579, 1216
AccB1I GGYRCC 1 cut(s) 1129
AccB7I CCANNNNNTGG 1 cut(s) 729
AccBSI CCGCTC 1 cut(s) 1157
AccI GTMKAC 1 cut(s) 1038
AccII CGCG 1 cut(s) 883
AciI CCGC 6 cut(s) 361, 693, 807, 1045, 1074, 1157
AclWI GGATC 3 cut(s) 837, 850, 967
AcoI YGGCCR 1 cut(s) 1145
AcvI CACGTG 1 cut(s) 411
AfaI GTAC 6 cut(s) 686, 710, 815, 874, 1026, 1300
AfiI CCNNNNNNNGG 6 cut(s) 46, 603, 729, 986, 1069, 1070
AflII CTTAAG 1 cut(s) 335
AflIII ACRYGT 3 cut(s) 408, 410, 861
AgsI TTSAA 6 cut(s) 326, 559, 668, 677, 767, 1171
AjnI CCWGG 2 cut(s) 602, 722
AjuI GAANNNNNNNTTGG 2 cut(s) 1091, 1123
AluBI AGCT 7 cut(s) 284, 329, 642, 663, 673, 1116, 1142
AluI AGCT 7 cut(s) 284, 329, 642, 663, 673, 1116, 1142
Alw26I GTCTC 4 cut(s) 166, 193, 199, 447
AlwI GGATC 3 cut(s) 837, 850, 967
AoxI GGCC 4 cut(s) 103, 720, 740, 1145
ApeKI GCWGC 2 cut(s) 5, 316
Asp700I GAANNNNTTC 1 cut(s) 330
AspA2I CCTAGG 1 cut(s) 431
AspLEI GCGC 2 cut(s) 883, 1060
AspS9I GGNCC 2 cut(s) 740, 809
AsuHPI GGTGA 4 cut(s) 9, 692, 865, 1006
AvaII GGWCC 1 cut(s) 809
AvrII CCTAGG 1 cut(s) 431
AxyI CCTNAGG 1 cut(s) 1065
BalI TGGCCA 1 cut(s) 1147
BamHI GGATCC 1 cut(s) 842
BanI GGYRCC 1 cut(s) 1129
BanII GRGCYC 1 cut(s) 1197
BbrPI CACGTG 1 cut(s) 411
BbvI GCAGC 1 cut(s) 328
BccI CCATC 9 cut(s) 125, 337, 782, 895, 922, 984, 1204, 1270, 1361
BceAI ACGGC 1 cut(s) 63
BciT130I CCWGG 2 cut(s) 604, 724
BciVI GTATCC 1 cut(s) 1061
BclI TGATCA 1 cut(s) 1386
BcoDI GTCTC 4 cut(s) 166, 193, 199, 447
BfaI CTAG 7 cut(s) 74, 272, 432, 777, 923, 1055, 1302
BfrI CTTAAG 1 cut(s) 335
BfuAI ACCTGC 2 cut(s) 579, 1216
BfuI GTATCC 1 cut(s) 1061
BisI GCNGC 2 cut(s) 6, 317
BlnI CCTAGG 1 cut(s) 431
BlsI GCNGC 2 cut(s) 7, 318
BmcAI AGTACT 1 cut(s) 1300
Bme1390I CCNGG 2 cut(s) 604, 724
Bme18I GGWCC 1 cut(s) 809
BmgT120I GGNCC 2 cut(s) 740, 809
BmiI GGNNCC 5 cut(s) 358, 741, 844, 978, 1131
BmrFI CCNGG 2 cut(s) 604, 724
BoxI GACNNNNGTC 1 cut(s) 411
BpuEI CTTGAG 2 cut(s) 36, 461
BsaAI YACGTR 4 cut(s) 411, 688, 862, 1028
BsaJI CCNNGG 6 cut(s) 84, 100, 232, 431, 603, 723
BsaXI ACNNNNNCTCC 2 cut(s) 1103, 1133
Bsc4I CCNNNNNNNGG 6 cut(s) 46, 603, 729, 986, 1069, 1070
Bse1I ACTGG 3 cut(s) 358, 743, 846
Bse21I CCTNAGG 1 cut(s) 1065
Bse3DI GCAATG 2 cut(s) 68, 1194
BseBI CCWGG 2 cut(s) 604, 724
BseDI CCNNGG 6 cut(s) 84, 100, 232, 431, 603, 723
BseGI GGATG 6 cut(s) 11, 147, 201, 975, 995, 1384
BseLI CCNNNNNNNGG 6 cut(s) 46, 603, 729, 986, 1069, 1070
BseMI GCAATG 2 cut(s) 68, 1194
BseMII CTCAG 5 cut(s) 177, 198, 204, 210, 501
BseNI ACTGG 3 cut(s) 358, 743, 846
BseRI GAGGAG 1 cut(s) 1309
BseXI GCAGC 1 cut(s) 328
BseYI CCCAGC 1 cut(s) 642
Bsh1236I CGCG 1 cut(s) 883
BshFI GGCC 4 cut(s) 105, 722, 742, 1147
BshNI GGYRCC 1 cut(s) 1129
BslFI GGGAC 1 cut(s) 1339
BslI CCNNNNNNNGG 6 cut(s) 46, 603, 729, 986, 1069, 1070
BsmAI GTCTC 4 cut(s) 166, 193, 199, 447
BsmFI GGGAC 1 cut(s) 1339
BsmI GAATGC 3 cut(s) 426, 1177, 1345
BsnI GGCC 4 cut(s) 105, 722, 742, 1147
Bsp1286I GDGCHC 1 cut(s) 1197
Bsp143I GATC 4 cut(s) 842, 855, 959, 1386
BspACI CCGC 6 cut(s) 361, 693, 807, 1045, 1074, 1157
BspANI GGCC 4 cut(s) 105, 722, 742, 1147
BspCNI CTCAG 5 cut(s) 176, 197, 203, 209, 502
BspFNI CGCG 1 cut(s) 883
BspLI GGNNCC 5 cut(s) 358, 741, 844, 978, 1131
BspMI ACCTGC 2 cut(s) 579, 1216
BspPI GGATC 3 cut(s) 837, 850, 967
BspQI GCTCTTC 2 cut(s) 336, 1215
BspT107I GGYRCC 1 cut(s) 1129
BspTI CTTAAG 1 cut(s) 335
BsrBI CCGCTC 1 cut(s) 1157
BsrDI GCAATG 2 cut(s) 68, 1194
BsrI ACTGG 3 cut(s) 358, 743, 846
BssECI CCNNGG 6 cut(s) 84, 100, 232, 431, 603, 723
BssMI GATC 4 cut(s) 842, 855, 959, 1386
BssT1I CCWWGG 3 cut(s) 84, 232, 431
Bst2UI CCWGG 2 cut(s) 604, 724
Bst4CI ACNGT 1 cut(s) 144
Bst6I CTCTTC 3 cut(s) 69, 336, 1215
BstAFI CTTAAG 1 cut(s) 335
BstBAI YACGTR 4 cut(s) 411, 688, 862, 1028
BstDEI CTNAG 6 cut(s) 163, 184, 190, 196, 510, 1065
BstDSI CCRYGG 1 cut(s) 100
BstENI CCTNNNNNAGG 1 cut(s) 601
BstF5I GGATG 6 cut(s) 11, 147, 201, 975, 995, 1384
BstFNI CGCG 1 cut(s) 883
BstHHI GCGC 2 cut(s) 883, 1060
BstKTI GATC 4 cut(s) 845, 858, 962, 1389
BstMAI GTCTC 4 cut(s) 166, 193, 199, 447
BstMBI GATC 4 cut(s) 842, 855, 959, 1386
BstMWI GCNNNNNNNGC 4 cut(s) 423, 748, 832, 1340
BstNI CCWGG 2 cut(s) 604, 724
BstPAI GACNNNNGTC 1 cut(s) 411
BstSCI CCNGG 2 cut(s) 602, 722
BstUI CGCG 1 cut(s) 883
BstV1I GCAGC 1 cut(s) 328
BstX2I RGATCY 1 cut(s) 842
BstYI RGATCY 1 cut(s) 842
Bsu36I CCTNAGG 1 cut(s) 1065
BsuI GTATCC 1 cut(s) 1061
BsuRI GGCC 4 cut(s) 105, 722, 742, 1147
BtgI CCRYGG 1 cut(s) 100
BtsCI GGATG 6 cut(s) 11, 147, 201, 975, 995, 1384
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 2 cut(s) 246, 853
BveI ACCTGC 2 cut(s) 579, 1216
CfoI GCGC 2 cut(s) 883, 1060
Cfr13I GGNCC 2 cut(s) 740, 809
CpoI CGGWCCG 1 cut(s) 809
CseI GACGC 1 cut(s) 771
Csp6I GTAC 6 cut(s) 685, 709, 814, 873, 1025, 1299
CspCI CAANNNNNGTGG 2 cut(s) 1336, 1371
CspI CGGWCCG 1 cut(s) 809
CviAII CATG 5 cut(s) 26, 310, 446, 466, 729
CviQI GTAC 6 cut(s) 685, 709, 814, 873, 1025, 1299
DdeI CTNAG 6 cut(s) 163, 184, 190, 196, 510, 1065
DpnI GATC 4 cut(s) 844, 857, 961, 1388
DpnII GATC 4 cut(s) 842, 855, 959, 1386
EaeI YGGCCR 1 cut(s) 1145
Eam1104I CTCTTC 3 cut(s) 69, 336, 1215
EarI CTCTTC 3 cut(s) 69, 336, 1215
Eco130I CCWWGG 3 cut(s) 84, 232, 431
Eco24I GRGCYC 1 cut(s) 1197
Eco47I GGWCC 1 cut(s) 809
Eco72I CACGTG 1 cut(s) 411
Eco81I CCTNAGG 1 cut(s) 1065
EcoNI CCTNNNNNAGG 1 cut(s) 601
EcoRII CCWGG 2 cut(s) 602, 722
EcoT14I CCWWGG 3 cut(s) 84, 232, 431
EcoT38I GRGCYC 1 cut(s) 1197
ErhI CCWWGG 3 cut(s) 84, 232, 431
FaeI CATG 5 cut(s) 29, 313, 449, 469, 732
FalI AAGNNNNNCTT 2 cut(s) 318, 350
FaqI GGGAC 1 cut(s) 1339
FatI CATG 5 cut(s) 25, 309, 445, 465, 728
FauI CCCGC 2 cut(s) 368, 1067
FauNDI CATATG 1 cut(s) 494
FbaI TGATCA 1 cut(s) 1386
FblI GTMKAC 1 cut(s) 1038
Fnu4HI GCNGC 2 cut(s) 6, 317
FokI GGATG 5 cut(s) 134, 188, 982, 1002, 1391
FriOI GRGCYC 1 cut(s) 1197
Fsp4HI GCNGC 2 cut(s) 6, 317
FspBI CTAG 7 cut(s) 74, 272, 432, 777, 923, 1055, 1302
GlaI GCGC 2 cut(s) 882, 1059
GluI GCNGC 2 cut(s) 6, 317
GsaI CCCAGC 1 cut(s) 646
HaeIII GGCC 4 cut(s) 105, 722, 742, 1147
HgaI GACGC 1 cut(s) 771
HhaI GCGC 2 cut(s) 883, 1060
Hin1II CATG 5 cut(s) 29, 313, 449, 469, 732
Hin6I GCGC 2 cut(s) 881, 1058
HinP1I GCGC 2 cut(s) 881, 1058
HinfI GANTC 5 cut(s) 400, 472, 796, 1084, 1395
HphI GGTGA 4 cut(s) 9, 692, 865, 1006
Hpy166II GTNNAC 2 cut(s) 875, 1039
Hpy188I TCNGA 9 cut(s) 166, 382, 490, 511, 568, 787, 1154, 1219, 1366
Hpy8I GTNNAC 2 cut(s) 875, 1039
Hpy99I CGWCG 1 cut(s) 508
HpyCH4III ACNGT 1 cut(s) 144
HpyCH4IV ACGT 6 cut(s) 410, 503, 519, 687, 861, 1027
HpyCH4V TGCA 2 cut(s) 498, 1187
HpyF10VI GCNNNNNNNGC 4 cut(s) 423, 748, 832, 1340
HpyF3I CTNAG 6 cut(s) 163, 184, 190, 196, 510, 1065
HpySE526I ACGT 6 cut(s) 410, 503, 519, 687, 861, 1027
Hsp92II CATG 5 cut(s) 29, 313, 449, 469, 732
HspAI GCGC 2 cut(s) 881, 1058
Ksp22I TGATCA 1 cut(s) 1386
Kzo9I GATC 4 cut(s) 842, 855, 959, 1386
LguI GCTCTTC 2 cut(s) 336, 1215
LmnI GCTCC 2 cut(s) 1154, 1159
Lsp1109I GCAGC 1 cut(s) 328
MaeI CTAG 7 cut(s) 74, 272, 432, 777, 923, 1055, 1302
MaeII ACGT 6 cut(s) 410, 503, 519, 687, 861, 1027
MaeIII GTNAC 6 cut(s) 56, 112, 459, 528, 581, 688
MalI GATC 4 cut(s) 844, 857, 961, 1388
MbiI CCGCTC 1 cut(s) 1157
MboI GATC 4 cut(s) 842, 855, 959, 1386
MboII GAAGA 6 cut(s) 28, 56, 248, 323, 379, 1232
MfeI CAATTG 1 cut(s) 213
MflI RGATCY 1 cut(s) 842
MhlI GDGCHC 1 cut(s) 1197
MlsI TGGCCA 1 cut(s) 1147
MluCI AATT 6 cut(s) 213, 366, 484, 1319, 1373, 1382
MluNI TGGCCA 1 cut(s) 1147
MlyI GAGTC 4 cut(s) 394, 805, 1093, 1389
MmeI TCCRAC 5 cut(s) 405, 513, 915, 937, 1089
Mox20I TGGCCA 1 cut(s) 1147
MroXI GAANNNNTTC 1 cut(s) 330
MscI TGGCCA 1 cut(s) 1147
MseI TTAA 3 cut(s) 134, 336, 1417
Msp20I TGGCCA 1 cut(s) 1147
MspA1I CMGCKG 2 cut(s) 642, 1045
MspCI CTTAAG 1 cut(s) 335
MspR9I CCNGG 2 cut(s) 604, 724
MunI CAATTG 1 cut(s) 213
Mva1269I GAATGC 3 cut(s) 426, 1177, 1345
MvaI CCWGG 2 cut(s) 604, 724
MvnI CGCG 1 cut(s) 883
MwoI GCNNNNNNNGC 4 cut(s) 423, 748, 832, 1340
NdeI CATATG 1 cut(s) 494
NdeII GATC 4 cut(s) 842, 855, 959, 1386
NlaIII CATG 5 cut(s) 29, 313, 449, 469, 732
NlaIV GGNNCC 5 cut(s) 358, 741, 844, 978, 1131
NmuCI GTSAC 3 cut(s) 56, 581, 688
PciSI GCTCTTC 2 cut(s) 336, 1215
PctI GAATGC 3 cut(s) 426, 1177, 1345
PdmI GAANNNNTTC 1 cut(s) 330
PfeI GAWTC 1 cut(s) 472
PflMI CCANNNNNTGG 1 cut(s) 729
PkrI GCNGC 2 cut(s) 7, 318
PleI GAGTC 4 cut(s) 394, 804, 1092, 1389
PmaCI CACGTG 1 cut(s) 411
PmlI CACGTG 1 cut(s) 411
PpsI GAGTC 4 cut(s) 394, 804, 1092, 1389
Ppu21I YACGTR 4 cut(s) 411, 688, 862, 1028
PshAI GACNNNNGTC 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 602, 722
PspCI CACGTG 1 cut(s) 411
PspFI CCCAGC 1 cut(s) 642
PspGI CCWGG 2 cut(s) 602, 722
PspN4I GGNNCC 5 cut(s) 358, 741, 844, 978, 1131
PspPI GGNCC 2 cut(s) 740, 809
PsuI RGATCY 1 cut(s) 842
PvuII CAGCTG 1 cut(s) 642
RsaI GTAC 6 cut(s) 686, 710, 815, 874, 1026, 1300
RsaNI GTAC 6 cut(s) 685, 709, 814, 873, 1025, 1299
Rsr2I CGGWCCG 1 cut(s) 809
RsrII CGGWCCG 1 cut(s) 809
SapI GCTCTTC 2 cut(s) 336, 1215
SaqAI TTAA 3 cut(s) 134, 336, 1417
SatI GCNGC 2 cut(s) 6, 317
Sau3AI GATC 4 cut(s) 842, 855, 959, 1386
Sau96I GGNCC 2 cut(s) 740, 809
ScaI AGTACT 1 cut(s) 1300
SchI GAGTC 4 cut(s) 394, 805, 1093, 1389
ScrFI CCNGG 2 cut(s) 604, 724
SduI GDGCHC 1 cut(s) 1197
SinI GGWCC 1 cut(s) 809
SmlI CTYRAG 3 cut(s) 51, 335, 476
SmoI CTYRAG 3 cut(s) 51, 335, 476
Sse9I AATT 6 cut(s) 213, 366, 484, 1319, 1373, 1382
SsiI CCGC 6 cut(s) 361, 693, 807, 1045, 1074, 1157
SspMI CTAG 7 cut(s) 74, 272, 432, 777, 923, 1055, 1302
StyD4I CCNGG 2 cut(s) 602, 722
StyI CCWWGG 3 cut(s) 84, 232, 431
TaaI ACNGT 1 cut(s) 144
TaiI ACGT 6 cut(s) 413, 506, 522, 690, 864, 1030
TaqI TCGA 4 cut(s) 348, 405, 819, 1393
TasI AATT 6 cut(s) 213, 366, 484, 1319, 1373, 1382
TatI WGTACW 2 cut(s) 708, 1298
TfiI GAWTC 1 cut(s) 472
Tru1I TTAA 3 cut(s) 134, 336, 1417
Tru9I TTAA 3 cut(s) 134, 336, 1417
TscAI CASTG 2 cut(s) 253, 853
TseFI GTSAC 3 cut(s) 56, 581, 688
TseI GCWGC 2 cut(s) 5, 316
Tsp45I GTSAC 3 cut(s) 56, 581, 688
TspDTI ATGAA 6 cut(s) 136, 280, 326, 934, 999, 1395
TspGWI ACGGA 2 cut(s) 89, 801
TspRI CASTG 2 cut(s) 253, 853
Van91I CCANNNNNTGG 1 cut(s) 729
Vha464I CTTAAG 1 cut(s) 335
VpaK11BI GGWCC 1 cut(s) 809
XagI CCTNNNNNAGG 1 cut(s) 601
XbaI TCTAGA 1 cut(s) 776
XcmI CCANNNNNNNNNTGG 3 cut(s) 898, 987, 1140
XmaJI CCTAGG 1 cut(s) 431
XmiI GTMKAC 1 cut(s) 1038
XmnI GAANNNNTTC 1 cut(s) 330
XspI CTAG 7 cut(s) 74, 272, 432, 777, 923, 1055, 1302
ZrmI AGTACT 1 cut(s) 1300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.