Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0015335

Physical Location & Seq

Genomic Coordinates Reverse (-)

30248707 .. 30250551

Gene Structure 1845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023936

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGACCACCACCACCACCTCTACCTCCCCATGGAACTCTCGCTTAAGGGAGCTCGCAAAGCAATGCCTCTTCTCCGAAGCTCTCACTCTTTACCGCCAAATGCTCCGATTCGGCCACCCACCCAACGCTTTCACTTTCCCCTTCGCTCTCAAATCCTGCGCCGCCCTCTCCCTCCCTCTCACCGGTTCACTCCTCCATTCCCACGTCGTCAAAACCGGGTGCGAGCCCGACCCCTTCGTACAAACTTCTTTGGTTTCCATGTACTCTAAATGCTGTTCGACCGATGACGCACGCAAGGTGTTCGATCAAAATCCCCACTCGAGGAAGCTGACTGTTTGCTACAATGCTTTGATATCTGGGCATGCTTCGAATTCGAAATTTCATGATGCGGTTTCGTTGTTTCGTCGAATGAGGGAGGAGGGCGTGGAGGTTAATTCGGTTACCATGTTGGGTTTGATTCCGGGGTGCGTGGCTCCGGTGCATTTGGGTCTTGGGATGTGCCTTCATGGTTCTAGCGTGAAGTGCGGTTTCGACGTTGATTTGTCTGTGAGGAATTGTTTGCTTACGATGTATGTGAAATGTGGGTCGGTAGATAATGCAAGGAAGATCTTTGATGCAATGCCGGAAAAGGGTTTGATTACTTGGAATGCAATGATTTCCGGGTATGCGCAGAATGGGCTTGCTACTCATGTTTTGAATCTGTACAGGGAGATGGAATCTTGTGGTGTTTGCCCTGATCCTGTGACGCTTGTTGGTGTTCTATCGTCGTGTACTCACCTTGGTGCGCATGGCGTTGGACGTGAGGTAGAAAGACGGATAGAGTCTAGTGGATTTGGTTCCAATCCGTATTTGAAAAATGCTCTGATCAATATGTACGCTAGGTGTGGTAATTTGGTGAAGGCTCATGCTATTTTTGATGTCATGCCTGAAAAAAGCTTAGTTTCTTGGACAGCGATTATCGGTGGGTATGGGATGCACGGACATGGAGAGATTGCATTGGAGCTCTTCGAGGAAATGATCGCAACTGGAATCAGGCCTGACAAAGCCATGTTTGTGATTGTTTTGTCGGCCTGTAGCCATGCAGGATTGACTGATGAGGGACTGGAATGTTTTGCTGCAATGGAGAAAAACTATAGGTTGCAGCCTGGGCCTGAGCATTATTCTTGCATGGTGGATCTTTTAGGGCGTGCAGGTCAGCTTAAAGAAGCAAAAGAGCTAATTGACTCGATGCAGGTAAAGCCTGATGGTGGAGTATGGGGAGCCCTTTTGGGTGCCTGTAAAATACATAAAAATGTAGAACTAGCAGAGATAGCTTTTGAACATGTCATCGAGCTAGAACCAACTAATAGTGGTTATTATGTGTTAATGTCAAATATATACTCTGATGCAAATAATCTAGAAGGGGTTTTAAAGGTTCGGGTTATGATGAAGGAGAGGCAGCTCAAAAAGGAGCCAGGGTGTAGCTATGTTGAGTGTAAAGGAAGAGTTCATGTTTTCTTGGCTGGGGATAGAAGCCATTGTCAGACAGAAGATATATACAGCATATTGGAGGAGTTAGAAAATTTAGCCTGGGAACCTGGCGCGTCCAATGAGAATGGAGAAAGAAACAAAGAGCAAGTAATTGGTGTTGGTGTTCACAGTGAAAAATTGGCAATTGCATTTGGGCTCTTGAACACTGAACCAGGGACTGAGATCGTAGTGATAAAGAACCTAAGGGTATGTGGAGACTGCCACTTGTTTATCAAGTCGATTAGCAAGATTGTGGATCGTCAGTTTGTGGTCAGAGATGCTACTCGTTTTCACCATTTCAGAAATGGGATTTGTTCTTGTAAAGACTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

615

Amino Acids

67.7

Weight (kDa)

6.56

Isoelectric Point (pI)

35.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	111 - 157	2.3e-10	PPR repeat family
PPR	PF01535	112 - 142	1.2e-07	PPR repeat
PPR_2	PF13041	212 - 257	4.3e-08	PPR repeat family
PPR	PF01535	213 - 243	3.7e-08	PPR repeat
PPR_2	PF13041	312 - 359	1.8e-08	PPR repeat family
PPR	PF01535	314 - 343	3.2e-06	PPR repeat
E_motif	PF20431	429 - 491	2.8e-20	E motif
DYW_deaminase	PF14432	537 - 614	5.2e-33	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0015335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11460
fragaria_vesca	FvH4_6g19130
malus_domestica	MD14G1027300.v1.1
prunus_persica	Prupe.7G104400_v2.0.a1
pyrus_communis	pycom14g02600
rosa_chinensis	RchiOBHm_Chr3g0474241
rosa_laevigata	RLG00000023936 RLG00000023939
rosa_multiflora	Rmu_sc0004507.1_g000021 Rmu_sc0015051.1_g000006
rosa_roxburghii	Rroxscaffold_6G00407410
rosa_rugosa	Rorug03G0139800
rosa_samantha	Rh3AG190200 Rh3BG219500 Rh3DG215000
rosa_wichuraiana	Rw3G017350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	669, 786
Acc36I	ACCTGC	2 cut(s)	1181, 1222
AccB1I	GGYRCC	1 cut(s)	1271
AccII	CGCG	1 cut(s)	1583
AciI	CCGC	4 cut(s)	94, 162, 389, 525
AclWI	GGATC	3 cut(s)	731, 1182, 1773
AcoI	YGGCCR	1 cut(s)	112
AcsI	RAATTY	3 cut(s)	370, 377, 1561
AfaI	GTAC	5 cut(s)	240, 263, 704, 772, 875
AfiI	CCNNNNNNNGG	5 cut(s)	30, 182, 321, 629, 1247
AflII	CTTAAG	1 cut(s)	43
AflIII	ACRYGT	1 cut(s)	1321
AgeI	ACCGGT	1 cut(s)	182
AgsI	TTSAA	4 cut(s)	697, 853, 1319, 1672
AjiI	CACGTC	2 cut(s)	205, 800
AjnI	CCWGG	5 cut(s)	1144, 1453, 1568, 1576, 1681
AleI	CACNNNNGTG	1 cut(s)	780
Alw21I	GWGCWC	2 cut(s)	54, 1005
Alw26I	GTCTC	1 cut(s)	1719
AlwI	GGATC	3 cut(s)	731, 1182, 1773
AlwNI	CAGNNNCTG	1 cut(s)	1688
Ama87I	CYCGRG	1 cut(s)	319
AoxI	GGCC	4 cut(s)	112, 1034, 1068, 1148
ApeKI	GCWGC	3 cut(s)	1115, 1141, 1438
ApoI	RAATTY	3 cut(s)	370, 377, 1561
AsiGI	ACCGGT	1 cut(s)	182
AspLEI	GCGC	4 cut(s)	161, 670, 787, 1583
AspS9I	GGNCC	1 cut(s)	1148
AsuC2I	CCSGG	3 cut(s)	217, 462, 661
AsuHPI	GGTGA	4 cut(s)	172, 767, 907, 1793
AsuII	TTCGAA	2 cut(s)	368, 374
AvaI	CYCGRG	1 cut(s)	319
AxyI	CCTNAGG	1 cut(s)	1712
BanI	GGYRCC	1 cut(s)	1271
BanII	GRGCYC	5 cut(s)	54, 228, 1005, 1264, 1668
Bbv12I	GWGCWC	2 cut(s)	54, 1005
BbvI	GCAGC	3 cut(s)	1102, 1153, 1450
BccI	CCATC	2 cut(s)	706, 1238
BcgI	CGANNNNNNTGC	2 cut(s)	283, 317
BciT130I	CCWGG	5 cut(s)	1146, 1455, 1570, 1578, 1683
BclI	TGATCA	1 cut(s)	864
BcnI	CCSGG	3 cut(s)	217, 462, 661
BcoDI	GTCTC	1 cut(s)	1719
BfaI	CTAG	6 cut(s)	513, 825, 879, 1301, 1334, 1397
BfmI	CTRYAG	2 cut(s)	1072, 1132
BfrI	CTTAAG	1 cut(s)	43
BfuAI	ACCTGC	2 cut(s)	1181, 1222
BglII	AGATCT	1 cut(s)	606
BisI	GCNGC	4 cut(s)	162, 1116, 1142, 1439
BlsI	GCNGC	4 cut(s)	163, 1117, 1143, 1440
Bme1390I	CCNGG	8 cut(s)	217, 462, 661, 1146, 1455, 1570, 1578, 1683
BmeT110I	CYCGRG	1 cut(s)	319
BmgBI	CACGTC	2 cut(s)	205, 800
BmgT120I	GGNCC	1 cut(s)	1148
BmiI	GGNNCC	6 cut(s)	474, 838, 1261, 1273, 1452, 1575
BmrFI	CCNGG	8 cut(s)	217, 462, 661, 1146, 1455, 1570, 1578, 1683
BmsI	GCATC	6 cut(s)	376, 604, 963, 1218, 1375, 1777
Bpu10I	CCTNAGC	1 cut(s)	1152
Bpu14I	TTCGAA	2 cut(s)	368, 374
BpuMI	CCSGG	3 cut(s)	217, 462, 661
BsaBI	GATNNNNATC	1 cut(s)	309
BsaJI	CCNNGG	7 cut(s)	29, 461, 778, 1145, 1454, 1569, 1682
BsaWI	WCCGGW	2 cut(s)	182, 475
BsaXI	ACNNNNNCTCC	2 cut(s)	1442, 1472
Bsc4I	CCNNNNNNNGG	5 cut(s)	30, 182, 321, 629, 1247
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	3 cut(s)	1030, 1107, 1844
Bse21I	CCTNAGG	1 cut(s)	1712
Bse3DI	GCAATG	4 cut(s)	68, 624, 657, 1125
Bse8I	GATNNNNATC	1 cut(s)	309
BseBI	CCWGG	5 cut(s)	1146, 1455, 1570, 1578, 1683
BseDI	CCNNGG	7 cut(s)	29, 461, 778, 1145, 1454, 1569, 1682
BseGI	GGATG	2 cut(s)	501, 978
BseJI	GATNNNNATC	1 cut(s)	309
BseLI	CCNNNNNNNGG	5 cut(s)	30, 182, 321, 629, 1247
BseMI	GCAATG	4 cut(s)	68, 624, 657, 1125
BseMII	CTCAG	2 cut(s)	1143, 1680
BseNI	ACTGG	3 cut(s)	1030, 1107, 1844
BseRI	GAGGAG	3 cut(s)	182, 431, 1565
BseXI	GCAGC	3 cut(s)	1102, 1153, 1450
BseYI	CCCAGC	1 cut(s)	1502
BsgI	GTGCAG	1 cut(s)	1209
Bsh1236I	CGCG	1 cut(s)	1583
Bsh1285I	CGRYCG	1 cut(s)	282
BshFI	GGCC	4 cut(s)	114, 1036, 1070, 1150
BshNI	GGYRCC	1 cut(s)	1271
BshTI	ACCGGT	1 cut(s)	182
BsiEI	CGRYCG	1 cut(s)	282
BsiHKAI	GWGCWC	2 cut(s)	54, 1005
BsiHKCI	CYCGRG	1 cut(s)	319
BsiSI	CCGG	6 cut(s)	183, 216, 461, 476, 623, 660
BslFI	GGGAC	2 cut(s)	1113, 1699
BslI	CCNNNNNNNGG	5 cut(s)	30, 182, 321, 629, 1247
BsmAI	GTCTC	1 cut(s)	1719
BsmFI	GGGAC	2 cut(s)	1113, 1699
BsmI	GAATGC	1 cut(s)	652
BsnI	GGCC	4 cut(s)	114, 1036, 1070, 1150
BsoBI	CYCGRG	1 cut(s)	319
Bsp119I	TTCGAA	2 cut(s)	368, 374
Bsp1286I	GDGCHC	5 cut(s)	54, 228, 1005, 1264, 1668
Bsp1407I	TGTACA	1 cut(s)	702
Bsp143I	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
Bsp19I	CCATGG	1 cut(s)	29
BspACI	CCGC	4 cut(s)	94, 162, 389, 525
BspANI	GGCC	4 cut(s)	114, 1036, 1070, 1150
BspCNI	CTCAG	2 cut(s)	1144, 1681
BspFNI	CGCG	1 cut(s)	1583
BspHI	TCATGA	1 cut(s)	382
BspLI	GGNNCC	6 cut(s)	474, 838, 1261, 1273, 1452, 1575
BspMI	ACCTGC	2 cut(s)	1181, 1222
BspPI	GGATC	3 cut(s)	731, 1182, 1773
BspQI	GCTCTTC	1 cut(s)	1010
BspT104I	TTCGAA	2 cut(s)	368, 374
BspT107I	GGYRCC	1 cut(s)	1271
BspTI	CTTAAG	1 cut(s)	43
BsrDI	GCAATG	4 cut(s)	68, 624, 657, 1125
BsrFI	RCCGGY	1 cut(s)	182
BsrGI	TGTACA	1 cut(s)	702
BsrI	ACTGG	3 cut(s)	1030, 1107, 1844
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	7 cut(s)	29, 461, 778, 1145, 1454, 1569, 1682
BssMI	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
BssT1I	CCWWGG	2 cut(s)	29, 778
Bst2UI	CCWGG	5 cut(s)	1146, 1455, 1570, 1578, 1683
Bst4CI	ACNGT	2 cut(s)	334, 1640
Bst6I	CTCTTC	3 cut(s)	74, 1010, 1477
BstAFI	CTTAAG	1 cut(s)	43
BstAUI	TGTACA	1 cut(s)	702
BstBI	TTCGAA	2 cut(s)	368, 374
BstC8I	GCNNGC	6 cut(s)	54, 224, 292, 363, 681, 1188
BstDEI	CTNAG	4 cut(s)	937, 1152, 1689, 1712
BstDSI	CCRYGG	1 cut(s)	29
BstEII	GGTNACC	1 cut(s)	439
BstF5I	GGATG	2 cut(s)	501, 978
BstFNI	CGCG	1 cut(s)	1583
BstHHI	GCGC	4 cut(s)	161, 670, 787, 1583
BstKTI	GATC	8 cut(s)	307, 609, 739, 867, 1020, 1177, 1695, 1768
BstMAI	GTCTC	1 cut(s)	1719
BstMBI	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
BstMCI	CGRYCG	1 cut(s)	282
BstMWI	GCNNNNNNNGC	6 cut(s)	58, 522, 676, 1147, 1237, 1310
BstNI	CCWGG	5 cut(s)	1146, 1455, 1570, 1578, 1683
BstNSI	RCATGY	2 cut(s)	365, 1325
BstPI	GGTNACC	1 cut(s)	439
BstSCI	CCNGG	8 cut(s)	215, 460, 659, 1144, 1453, 1568, 1576, 1681
BstSFI	CTRYAG	2 cut(s)	1072, 1132
BstUI	CGCG	1 cut(s)	1583
BstV1I	GCAGC	3 cut(s)	1102, 1153, 1450
BstX2I	RGATCY	2 cut(s)	606, 1174
BstYI	RGATCY	2 cut(s)	606, 1174
Bsu36I	CCTNAGG	1 cut(s)	1712
BsuRI	GGCC	4 cut(s)	114, 1036, 1070, 1150
BtgI	CCRYGG	1 cut(s)	29
BtrI	CACGTC	2 cut(s)	205, 800
BtsCI	GGATG	2 cut(s)	501, 978
BtsIMutI	CAGTG	2 cut(s)	1645, 1674
BveI	ACCTGC	2 cut(s)	1181, 1222
Cac8I	GCNNGC	6 cut(s)	54, 224, 292, 363, 681, 1188
CaiI	CAGNNNCTG	1 cut(s)	1688
CciI	TCATGA	1 cut(s)	382
CfoI	GCGC	4 cut(s)	161, 670, 787, 1583
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	1 cut(s)	1148
CseI	GACGC	3 cut(s)	296, 754, 1572
Csp6I	GTAC	5 cut(s)	239, 262, 703, 771, 874
CspAI	ACCGGT	1 cut(s)	182
CviQI	GTAC	5 cut(s)	239, 262, 703, 771, 874
DdeI	CTNAG	4 cut(s)	937, 1152, 1689, 1712
DpnI	GATC	8 cut(s)	306, 608, 738, 866, 1019, 1176, 1694, 1767
DpnII	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
DraI	TTTAAA	1 cut(s)	1410
EaeI	YGGCCR	1 cut(s)	112
Eam1104I	CTCTTC	3 cut(s)	74, 1010, 1477
EarI	CTCTTC	3 cut(s)	74, 1010, 1477
Ecl136II	GAGCTC	2 cut(s)	52, 1003
Eco130I	CCWWGG	2 cut(s)	29, 778
Eco147I	AGGCCT	1 cut(s)	1036
Eco24I	GRGCYC	5 cut(s)	54, 228, 1005, 1264, 1668
Eco32I	GATATC	1 cut(s)	354
Eco53kI	GAGCTC	2 cut(s)	52, 1003
Eco81I	CCTNAGG	1 cut(s)	1712
Eco88I	CYCGRG	1 cut(s)	319
Eco91I	GGTNACC	1 cut(s)	439
EcoICRI	GAGCTC	2 cut(s)	52, 1003
EcoO65I	GGTNACC	1 cut(s)	439
EcoRI	GAATTC	1 cut(s)	370
EcoRII	CCWGG	5 cut(s)	1144, 1453, 1568, 1576, 1681
EcoRV	GATATC	1 cut(s)	354
EcoT14I	CCWWGG	2 cut(s)	29, 778
EcoT38I	GRGCYC	5 cut(s)	54, 228, 1005, 1264, 1668
ErhI	CCWWGG	2 cut(s)	29, 778
FaqI	GGGAC	2 cut(s)	1113, 1699
FbaI	TGATCA	1 cut(s)	864
Fnu4HI	GCNGC	4 cut(s)	162, 1116, 1142, 1439
FokI	GGATG	2 cut(s)	508, 985
FriOI	GRGCYC	5 cut(s)	54, 228, 1005, 1264, 1668
Fsp4HI	GCNGC	4 cut(s)	162, 1116, 1142, 1439
FspAI	RTGCGCAY	1 cut(s)	786
FspBI	CTAG	6 cut(s)	513, 825, 879, 1301, 1334, 1397
FspI	TGCGCA	2 cut(s)	669, 786
GlaI	GCGC	4 cut(s)	160, 669, 786, 1582
GluI	GCNGC	4 cut(s)	162, 1116, 1142, 1439
GsaI	CCCAGC	1 cut(s)	1506
HaeIII	GGCC	4 cut(s)	114, 1036, 1070, 1150
HapII	CCGG	6 cut(s)	183, 216, 461, 476, 623, 660
HgaI	GACGC	3 cut(s)	296, 754, 1572
HhaI	GCGC	4 cut(s)	161, 670, 787, 1583
Hin6I	GCGC	4 cut(s)	159, 668, 785, 1581
HinP1I	GCGC	4 cut(s)	159, 668, 785, 1581
HindIII	AAGCTT	1 cut(s)	934
HinfI	GANTC	7 cut(s)	108, 457, 697, 716, 821, 1029, 1223
HpaII	CCGG	6 cut(s)	183, 216, 461, 476, 623, 660
HphI	GGTGA	4 cut(s)	172, 767, 907, 1793
Hpy166II	GTNNAC	3 cut(s)	188, 771, 1636
Hpy188I	TCNGA	7 cut(s)	76, 107, 864, 1384, 1524, 1784, 1811
Hpy188III	TCNNGA	3 cut(s)	383, 1397, 1669
Hpy8I	GTNNAC	3 cut(s)	188, 771, 1636
Hpy99I	CGWCG	4 cut(s)	209, 408, 536, 769
HpyAV	CCTTC	6 cut(s)	151, 244, 512, 892, 1394, 1423
HpyCH4III	ACNGT	2 cut(s)	334, 1640
HpyCH4IV	ACGT	3 cut(s)	204, 534, 799
HpyF10VI	GCNNNNNNNGC	6 cut(s)	58, 522, 676, 1147, 1237, 1310
HpyF3I	CTNAG	4 cut(s)	937, 1152, 1689, 1712
HpySE526I	ACGT	3 cut(s)	204, 534, 799
HspAI	GCGC	4 cut(s)	159, 668, 785, 1581
Ksp22I	TGATCA	1 cut(s)	864
Kzo9I	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
LguI	GCTCTTC	1 cut(s)	1010
LmnI	GCTCC	6 cut(s)	49, 108, 478, 1000, 1259, 1450
Lsp1109I	GCAGC	3 cut(s)	1102, 1153, 1450
LweI	GCATC	6 cut(s)	376, 604, 963, 1218, 1375, 1777
MaeI	CTAG	6 cut(s)	513, 825, 879, 1301, 1334, 1397
MaeII	ACGT	3 cut(s)	204, 534, 799
MaeIII	GTNAC	2 cut(s)	439, 742
MalI	GATC	8 cut(s)	306, 608, 738, 866, 1019, 1176, 1694, 1767
MboI	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
MboII	GAAGA	5 cut(s)	61, 616, 997, 1494, 1541
MfeI	CAATTG	1 cut(s)	1653
MflI	RGATCY	2 cut(s)	606, 1174
MhlI	GDGCHC	5 cut(s)	54, 228, 1005, 1264, 1668
MlyI	GAGTC	2 cut(s)	830, 1217
MmeI	TCCRAC	1 cut(s)	775
MseI	TTAA	5 cut(s)	44, 432, 1200, 1364, 1409
MslI	CAYNNNNRTG	4 cut(s)	780, 981, 1052, 1290
MspCI	CTTAAG	1 cut(s)	43
MspI	CCGG	6 cut(s)	183, 216, 461, 476, 623, 660
MspR9I	CCNGG	8 cut(s)	217, 462, 661, 1146, 1455, 1570, 1578, 1683
MunI	CAATTG	1 cut(s)	1653
Mva1269I	GAATGC	1 cut(s)	652
MvaI	CCWGG	5 cut(s)	1146, 1455, 1570, 1578, 1683
MvnI	CGCG	1 cut(s)	1583
MwoI	GCNNNNNNNGC	6 cut(s)	58, 522, 676, 1147, 1237, 1310
NciI	CCSGG	3 cut(s)	217, 462, 661
NcoI	CCATGG	1 cut(s)	29
NdeII	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
NlaIV	GGNNCC	6 cut(s)	474, 838, 1261, 1273, 1452, 1575
NmuCI	GTSAC	1 cut(s)	742
NsbI	TGCGCA	2 cut(s)	669, 786
NspI	RCATGY	2 cut(s)	365, 1325
NspV	TTCGAA	2 cut(s)	368, 374
OliI	CACNNNNGTG	1 cut(s)	780
PaeI	GCATGC	1 cut(s)	365
PaeR7I	CTCGAG	1 cut(s)	319
PagI	TCATGA	1 cut(s)	382
PceI	AGGCCT	1 cut(s)	1036
PciI	ACATGT	1 cut(s)	1321
PciSI	GCTCTTC	1 cut(s)	1010
PctI	GAATGC	1 cut(s)	652
PfeI	GAWTC	5 cut(s)	108, 457, 697, 716, 1029
PinAI	ACCGGT	1 cut(s)	182
PkrI	GCNGC	4 cut(s)	163, 1117, 1143, 1440
PleI	GAGTC	2 cut(s)	829, 1217
PpsI	GAGTC	2 cut(s)	829, 1217
PscI	ACATGT	1 cut(s)	1321
Psp124BI	GAGCTC	2 cut(s)	54, 1005
Psp6I	CCWGG	5 cut(s)	1144, 1453, 1568, 1576, 1681
PspEI	GGTNACC	1 cut(s)	439
PspFI	CCCAGC	1 cut(s)	1502
PspGI	CCWGG	5 cut(s)	1144, 1453, 1568, 1576, 1681
PspN4I	GGNNCC	6 cut(s)	474, 838, 1261, 1273, 1452, 1575
PspPI	GGNCC	1 cut(s)	1148
PspXI	VCTCGAGB	1 cut(s)	319
PstNI	CAGNNNCTG	1 cut(s)	1688
PsuI	RGATCY	2 cut(s)	606, 1174
RsaI	GTAC	5 cut(s)	240, 263, 704, 772, 875
RsaNI	GTAC	5 cut(s)	239, 262, 703, 771, 874
RseI	CAYNNNNRTG	4 cut(s)	780, 981, 1052, 1290
SacI	GAGCTC	2 cut(s)	54, 1005
SapI	GCTCTTC	1 cut(s)	1010
SaqAI	TTAA	5 cut(s)	44, 432, 1200, 1364, 1409
SatI	GCNGC	4 cut(s)	162, 1116, 1142, 1439
Sau3AI	GATC	8 cut(s)	304, 606, 736, 864, 1017, 1174, 1692, 1765
Sau96I	GGNCC	1 cut(s)	1148
SchI	GAGTC	2 cut(s)	830, 1217
ScrFI	CCNGG	8 cut(s)	217, 462, 661, 1146, 1455, 1570, 1578, 1683
SduI	GDGCHC	5 cut(s)	54, 228, 1005, 1264, 1668
SfaNI	GCATC	6 cut(s)	376, 604, 963, 1218, 1375, 1777
SfcI	CTRYAG	2 cut(s)	1072, 1132
Sfr274I	CTCGAG	1 cut(s)	319
SfuI	TTCGAA	2 cut(s)	368, 374
SlaI	CTCGAG	1 cut(s)	319
SmiMI	CAYNNNNRTG	4 cut(s)	780, 981, 1052, 1290
SmlI	CTYRAG	2 cut(s)	43, 319
SmoI	CTYRAG	2 cut(s)	43, 319
SphI	GCATGC	1 cut(s)	365
SseBI	AGGCCT	1 cut(s)	1036
SsiI	CCGC	4 cut(s)	94, 162, 389, 525
SspMI	CTAG	6 cut(s)	513, 825, 879, 1301, 1334, 1397
SstI	GAGCTC	2 cut(s)	54, 1005
StuI	AGGCCT	1 cut(s)	1036
StyD4I	CCNGG	8 cut(s)	215, 460, 659, 1144, 1453, 1568, 1576, 1681
StyI	CCWWGG	2 cut(s)	29, 778
TaaI	ACNGT	2 cut(s)	334, 1640
TaiI	ACGT	3 cut(s)	207, 537, 802
TaqII	GACCGA	1 cut(s)	296
TatI	WGTACW	3 cut(s)	261, 702, 770
TauI	GCSGC	1 cut(s)	164
TfiI	GAWTC	5 cut(s)	108, 457, 697, 716, 1029
Tru1I	TTAA	5 cut(s)	44, 432, 1200, 1364, 1409
Tru9I	TTAA	5 cut(s)	44, 432, 1200, 1364, 1409
TscAI	CASTG	2 cut(s)	1645, 1681
TseFI	GTSAC	1 cut(s)	742
TseI	GCWGC	3 cut(s)	1115, 1141, 1438
Tsp45I	GTSAC	1 cut(s)	742
TspDTI	ATGAA	4 cut(s)	371, 494, 1442, 1478
TspGWI	ACGGA	3 cut(s)	829, 834, 993
TspRI	CASTG	2 cut(s)	1645, 1681
Vha464I	CTTAAG	1 cut(s)	43
XapI	RAATTY	3 cut(s)	370, 377, 1561
XbaI	TCTAGA	1 cut(s)	1396
XceI	RCATGY	2 cut(s)	365, 1325
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1811
XhoI	CTCGAG	1 cut(s)	319
XspI	CTAG	6 cut(s)	513, 825, 879, 1301, 1334, 1397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.